diff --git a/VariantValidator/modules/mappers.py b/VariantValidator/modules/mappers.py index 138641c7..8a066419 100644 --- a/VariantValidator/modules/mappers.py +++ b/VariantValidator/modules/mappers.py @@ -143,8 +143,9 @@ def gene_to_transcripts(variant, validator, select_transcripts_dict): logger.warning(str(error)) return True else: - error = 'Please ensure the requested chromosome version relates to a supported genome build. ' \ - 'Supported genome builds are: GRCh37, GRCh38, hg19 and hg38' + error = 'Validation will fail if the selected chromosome reference sequence does not corresponds to ' \ + 'selected genome build. Please re-submit your query and select an alternate genome build. ' \ + 'Note, if you did not specify a genome build, VariantValidator defaults to GRCh38' variant.warnings.append(error) logger.warning(str(error)) return True