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    151 repositories

    • pytest-mip

      Public
      Tool to test the up-and-running MIP federations.
      github-pagespytestmipselenium-pythongithub-actionspytest-htmljunitxml
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Dec 11, 2024Dec 11, 2024

    • mip-deployment

      Public
      Deploy the Medical Informatics Platform
      docker
      JavaScript
      •4•3•0•0•Updated Dec 10, 2024Dec 10, 2024

    • mip-docs

      Public
      Documentation for Medical Informatics Platform
      0•3•0•0•Updated Nov 19, 2024Nov 19, 2024

    • linux-server-management

      Public
      Set of Ansible scripts for server setup, hardening and maintenance with semi-automate dependency maintenance. Please open issues/PR upstream. This is kept in sync
      Apache License 2.0
      •1•0•0•0•Updated Nov 1, 2024Nov 1, 2024

    • portal-backend

      Public
      Backend for the MIP portal
      serverdocker-imageweb-analytics
      Java
      •
      Other
      •2•1•0•2•Updated Oct 29, 2024Oct 29, 2024

    • heatmaply

      Public
      Interactive Heat Maps for R Using plotly
      R
      •73•0•0•2•Updated Jul 16, 2024Jul 16, 2024

    • exareme2

      Public
      Custom Engine for the MIP platform. (manually updated mirror)
      Python
      •
      MIT License
      •3•0•0•0•Updated Jul 10, 2024Jul 10, 2024

    • Rtsne

      Public
      R wrapper for Van der Maaten's Barnes-Hut implementation of t-Distributed Stochastic Neighbor Embedding
      C++
      •
      Other
      •66•0•0•1•Updated Jun 14, 2024Jun 14, 2024

    • gateway

      Public
      Gateway between the portal frontend and an engine (exareme, datashield, etc..)
      TypeScript
      •
      Apache License 2.0
      •0•1•0•0•Updated Apr 24, 2024Apr 24, 2024

    • mip.ebrains.eu

      Public
      Medical Informatics Platform (MIP) website
      Vue
      •0•0•0•58•Updated Apr 18, 2024Apr 18, 2024

    • Enabling_Services

      Public
      Enabling Services for the MIP front end.
      Java
      •
      MIT License
      •0•0•0•1•Updated Mar 18, 2024Mar 18, 2024

    • portal-frontend

      Public
      Frontend for the MIP portal
      reactjsdocker-imageweb-analytics
      TypeScript
      •
      Apache License 2.0
      •1•5•0•0•Updated Oct 16, 2023Oct 16, 2023

    • DataQualityControlTool

      Public
      Data Profiler Tool for the Human Brain Project MIP Local Layer.
      Python
      •
      Apache License 2.0
      •4•0•0•0•Updated Sep 26, 2023Sep 26, 2023

    • .github

      Public
      ✨Special ✨ repository that is use to add and display a README.md to the HBPMedical organization
      0•0•0•0•Updated Sep 19, 2023Sep 19, 2023

    • mip-dmp

      Public
      Python tool with Graphical User Interface to map datasets to a specific Common Data Elements (CDEs) metadata schema of a federation of the Medical Informatics Platform (MIP).
      Python
      •
      Apache License 2.0
      •0•1•2•0•Updated Aug 14, 2023Aug 14, 2023

    • mip_schema

      Public
      Open-source Python package to manipulate Common Data Elements Metadata Schema for the Medical Informatics Platform (MIP).
      Python
      •
      Apache License 2.0
      •0•1•0•0•Updated Aug 9, 2023Aug 9, 2023

    • DataCatalogue

      Public
      Java
      •
      GNU General Public License v3.0
      •5•3•0•0•Updated Jul 31, 2023Jul 31, 2023

    • MIPMap

      Public
      Java
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 5, 2023Jul 5, 2023

    • mip-endpoint-check

      Public
      Check the checkpoint
      TypeScript
      •0•0•0•0•Updated Jun 8, 2023Jun 8, 2023

    • exareme

      Public
      EXAREME
      Java
      •
      MIT License
      •20•0•0•1•Updated May 2, 2023May 2, 2023

    • ehr-datafactory-template

      Public
      PLpgSQL
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Apr 11, 2023Apr 11, 2023

    • ehr-mapping-design-template

      Public template
      bash scripts for testing a hospital's mapping task on a local machine
      PLpgSQL
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 11, 2023Apr 11, 2023

    • LORIS-for-MIP

      Public
      Setup of LORIS tailored for the Medical Informatics Platform
      PHP
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 11, 2023Apr 11, 2023

    • docker-pgtap

      Public
      Postgres pgTap test runner in docker
      testinginfrastructuredocker-image
      Shell
      •
      Apache License 2.0
      •16•0•0•0•Updated Feb 28, 2023Feb 28, 2023

    • docker-swarm-kernel-fix

      Public
      Quick and dirty fix for the Docker Swarm issue that we had in 2022, passed a certain Linux kernel version
      Shell
      •0•0•0•0•Updated May 6, 2022May 6, 2022

    • vagrant-mip-deployment

      Public
      Shell
      •1•0•0•0•Updated Oct 25, 2021Oct 25, 2021

    • rsshfs

      Public
      Reverse of sshfs
      Shell
      •
      GNU General Public License v3.0
      •17•0•0•0•Updated Sep 27, 2021Sep 27, 2021

    • cscs-openstack-migrate

      Public
      Python
      •0•0•0•0•Updated Sep 14, 2021Sep 14, 2021

    • vagrant-installer

      Public
      Shell
      •0•0•0•0•Updated Sep 8, 2021Sep 8, 2021

    • vagrant-openstack-provider

      Public
      Use Vagrant to manage OpenStack Cloud instances.
      Ruby
      •
      MIT License
      •101•0•0•0•Updated Aug 31, 2021Aug 31, 2021