DIPY

All

38 repositories

dipy.org
Public
The DIPY Website
Python
•7•2•3•0•Updated Nov 25, 2024Nov 25, 2024
dipy
Public
DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
python tracking machine-learning medical-imaging registration neuroimaging segmentation bundles spherical-harmonics microstructure
Python
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Other
•440•716•132•35•Updated Nov 19, 2024Nov 19, 2024
GPUStreamlines
Public
Cuda
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BSD 3-Clause "New" or "Revised" License
•6•9•2•6•Updated Nov 15, 2024Nov 15, 2024
preview-html
Public
Preview documentation changes from Pull Request
HTML
•0•0•0•0•Updated Nov 7, 2024Nov 7, 2024
dipy_web
Public
Website generation and content management tools for dipy.org
HTML
•15•4•11•0•Updated Nov 5, 2024Nov 5, 2024
workshop.dipy.org
Public
The DIPY Workshop website
1•0•0•0•Updated Oct 24, 2024Oct 24, 2024
docs.dipy.org
Public
DIPY documentation generated html
api mri medical-imaging diffusion-mri
HTML
•0•0•0•0•Updated Mar 11, 2024Mar 11, 2024
polaffini
Public
0•0•0•0•Updated Feb 6, 2024Feb 6, 2024
dipy_data
Public
Small datasets, figures and gifs used in tutorials
6•2•0•9•Updated Feb 1, 2024Feb 1, 2024
miccai23
Public
Python
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MIT License
•0•1•0•0•Updated Aug 24, 2023Aug 24, 2023
dipy_datatest
Public
Store files use for unittest
Creative Commons Zero v1.0 Universal
•0•0•0•0•Updated Apr 22, 2023Apr 22, 2023
dipy_assets
Public
Primary for sharing PDFs, other public documents and media.
0•1•0•0•Updated Mar 6, 2023Mar 6, 2023
parallel_experiments
Public
Python
•2•0•0•0•Updated Dec 19, 2022Dec 19, 2022
bl_apps_dipy_denoise_lpca
Public
Brainlife wrapper app for dipy_denoise_lpca workflows.
diffusion-mri diffusion-preprocessing diffusion-denoising dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•1•0•1•0•Updated Jun 11, 2021Jun 11, 2021
bl_apps_dipy_recobundles
Public
Brainlife wrapper app for dipy_recobundles workflows.
segmentation diffusion-mri dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•1•0•1•0•Updated Jun 11, 2021Jun 11, 2021
dipy-dki-paper
Public
Jupyter Notebook
•1•2•0•0•Updated Jun 1, 2021Jun 1, 2021
cudipy
Public
cupy-accelerated DIPY
Python
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Other
•5•10•5•1•Updated Mar 16, 2021Mar 16, 2021
cookiecutter-bl-dipy-apps
Public
Cookiecutter to generate brainlife apps for dipy
Python
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MIT License
•0•0•0•0•Updated Dec 16, 2020Dec 16, 2020
bl_apps_dipy_buan_shapes
Public
BUAN shape analysis App in BrainLife
analysis diffusion-mri dipy tractometry
Dockerfile
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BSD 3-Clause "New" or "Revised" License
•1•0•0•0•Updated Dec 15, 2020Dec 15, 2020
bl_apps_dipy_buan_profiles
Public
BUAN bundle profiles
Dockerfile
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BSD 3-Clause "New" or "Revised" License
•1•1•0•0•Updated Dec 15, 2020Dec 15, 2020
bl_apps_dipy_info
Public
Brainlife wrapper app for dipy_info workflows.
diffusion-mri dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Dec 15, 2020Dec 15, 2020
bl_apps_dipy_median_otsu
Public
Brainlife wrapper app for dipy_median_otsu workflows.
diffusion-mri dipy diffusion-preprocessing
Shell
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BSD 3-Clause "New" or "Revised" License
•1•0•1•0•Updated Dec 15, 2020Dec 15, 2020
bl_apps_dipy_reslice
Public
Brainlife wrapper app for dipy_reslice workflows.
diffusion-mri diffusion-preprocessing dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Dec 15, 2020Dec 15, 2020
bl_apps_dipy_track_pft
Public
Brainlife wrapper app for dipy_track_pft workflows.
tracking diffusion-mri tractography dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Dec 15, 2020Dec 15, 2020
bl_apps_dipy_track
Public
Brainlife wrapper app for dipy_track workflows.
tracking diffusion-mri tractography dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•1•0•Updated Dec 15, 2020Dec 15, 2020
bl_apps_dipy_slr
Public
Brainlife wrapper app for dipy_slr workflows.
diffusion-mri dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•1•0•Updated Dec 11, 2020Dec 11, 2020
bl_apps_dipy_mask
Public template
Brainlife wrapper app for dipy_mask workflows.
Dockerfile
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BSD 3-Clause "New" or "Revised" License
•0•1•0•0•Updated Dec 11, 2020Dec 11, 2020
bl_apps_dipy_gibbs_ringing
Public
Brainlife wrapper app for dipy_gibbs_ringing workflows.
diffusion-mri diffusion-preprocessing dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Dec 11, 2020Dec 11, 2020
bl_apps_dipy_fit_mapmri
Public
Brainlife wrapper app for dipy_fit_mapmri workflows.
diffusion-mri dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•0•0•Updated Dec 11, 2020Dec 11, 2020
bl_apps_dipy_fit_ivim
Public
Brainlife wrapper app for dipy_fit_ivim workflows.
diffusion-mri dipy
Shell
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BSD 3-Clause "New" or "Revised" License
•0•0•1•0•Updated Dec 11, 2020Dec 11, 2020