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@traitecoevo Trait Ecology and Evolution

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    82 repositories

    • hmde

      Public
      Implementation of hierarchical Bayesian longitudinal models to estimate differential equation parameters.
      rbayesian-methodsrstandifferential-equationsstanhierarchical-modelsbayesian-inverse-problems
      R
      •
      Other
      •3•2•1•2•Updated Jan 6, 2025Jan 6, 2025

    • austraits

      Public
      R package for accessing the AusTraits Plant database and working with traits.build databases
      databaseaustraliaplantstraits
      R
      •
      MIT License
      •2•22•8•1•Updated Jan 6, 2025Jan 6, 2025

    • reproductive_allocation_kuringgai

      Public
      Code reproducing papers by Lizzy Wenk on reproductive allocation of plant species In Kuringai National Park
      R
      •
      Other
      •1•1•2•0•Updated Dec 20, 2024Dec 20, 2024

    • APCalign

      Public
      R package for accessing, matching and updating species names of Australian flora
      r-package
      R
      •
      Other
      •6•4•5•1•Updated Dec 20, 2024Dec 20, 2024

    • traits.build

      Public
      Source for the traits.build R package, used to build AusTraits
      HTML
      •
      Other
      •1•9•19•0•Updated Dec 20, 2024Dec 20, 2024

    • traits.build-book

      Public
      traits-build manual
      R
      •
      Other
      •1•3•4•0•Updated Dec 17, 2024Dec 17, 2024

    • austraits.build

      Public
      Source for AusTraits
      databaseaustraliaplantsecology
      R
      •
      Other
      •3•16•6•5•Updated Dec 16, 2024Dec 16, 2024

    • bmsma

      Public
      Bayesian Multilevel Standardised Major Axis models
      C++
      •
      Other
      •0•2•1•0•Updated Dec 16, 2024Dec 16, 2024

    • austraits-api

      Public
      R
      •0•2•1•0•Updated Dec 13, 2024Dec 13, 2024

    • austraits.org

      Public
      Source code for website austraits.org
      JavaScript
      •0•0•3•0•Updated Dec 10, 2024Dec 10, 2024

    • traitecoevo.r-universe.dev

      Public
      Trait Ecology and Evolution R-Universe
      0•0•0•0•Updated Dec 8, 2024Dec 8, 2024

    • saltbush

      Public
      saltbush is an R package for processing drone data to calculate spectral diversity metrics. It also calculates on-the-ground diversity from traditional surveys specifically from the AusPlots framework
      R
      •
      GNU General Public License v3.0
      •0•1•2•0•Updated Nov 27, 2024Nov 27, 2024

    • fg_spectral_diversity

      Public
      R
      •0•0•8•0•Updated Nov 20, 2024Nov 20, 2024

    • infinitylists

      Public
      infinitylists allows you to generate place-based species lists for anywhere in Australia, pulling collection data and iNaturalist records from the Atlas of Living Australia.
      R
      •
      Creative Commons Attribution 4.0 International
      •0•3•10•0•Updated Oct 22, 2024Oct 22, 2024

    • plant.assembly

      Public
      Assembly code for plant
      R
      •
      Other
      •0•1•5•0•Updated Oct 21, 2024Oct 21, 2024

    • yosemiteNP_alltime_flora

      Public
      R
      •0•0•2•0•Updated Oct 17, 2024Oct 17, 2024

    • royalNP_alltime_flora

      Public
      versioned data for the flora of Royal National Park, NSW, Australia
      R
      •0•0•2•0•Updated Oct 16, 2024Oct 16, 2024

    • litterfitter

      Public
      Package for fitting and testing alternative models for single cohort litter decomposition data
      R
      •
      Other
      •1•5•5•0•Updated Oct 10, 2024Oct 10, 2024

    • aus_trait_gradients

      Public
      R
      •1•0•0•0•Updated Sep 25, 2024Sep 25, 2024

    • rabbit

      Public
      An R package to "rabbitly" process data recorded triaxial accelerometer outputs
      R
      •
      Other
      •0•0•3•0•Updated Sep 5, 2024Sep 5, 2024

    • APD

      Public
      The Australian Plant Traits Dictionary
      HTML
      •2•5•3•0•Updated Aug 23, 2024Aug 23, 2024

    • traits.build-template

      Public
      An example repository to get you started
      R
      •
      MIT License
      •1•3•1•0•Updated Aug 8, 2024Aug 8, 2024

    • w3id.org

      Public
      Website source code for w3id.org.
      HTML
      •1.3k•0•0•0•Updated Jul 31, 2024Jul 31, 2024

    • plant

      Public
      Trait-Driven Models of Ecology and Evolution 🌲
      simulationscience-researchforestsc-plus-plusrdynamicevolutiontraitecologydemography
      C++
      •20•53•67•3•Updated Jul 10, 2024Jul 10, 2024

    • APCalign-ms

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated May 6, 2024May 6, 2024

    • AI-species-catalogue

      Public
      HTML
      •0•0•1•0•Updated Mar 19, 2024Mar 19, 2024

    • APCalign-app

      Public
      Shiny app for APCalign package
      R
      •
      Other
      •0•0•2•0•Updated Mar 5, 2024Mar 5, 2024

    • shinystats

      Public
      R
      •0•0•0•0•Updated Feb 28, 2024Feb 28, 2024

    • sizedist

      Public
      C++
      •
      Other
      •1•4•2•0•Updated Nov 29, 2023Nov 29, 2023

    • smatr

      Public
      an R package for estimation and inference about allometric lines
      rinferenceallometric-lines
      R
      •
      Other
      •0•2•6•0•Updated Oct 11, 2023Oct 11, 2023