Repositories list

• ibdtools

  Public
  A cpp library/tool set for working with large identity-by-descent files

  C++

  •

  MIT License

  •0•1•9•0•Updated Sep 27, 2024Sep 27, 2024

• gladdb

  Public
  HTML

  •

  MIT License

  •0•0•0•0•Updated Mar 27, 2024Mar 27, 2024

• GLAD_DemographicAnalysis

  Public
  R

  •0•0•0•0•Updated Aug 1, 2023Aug 1, 2023

• Endometrial-Cancer

  Public
  All comands and comments related to the processing of exome, somatic mutation and proteomic data for the Endoseq project

  R

  •0•0•0•0•Updated Feb 7, 2023Feb 7, 2023

• gladmatch

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Jul 7, 2022Jul 7, 2022

• gladprep

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Apr 22, 2022Apr 22, 2022

• sarek

  Public
  Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

  Nextflow

  •

  MIT License

  •418•0•0•0•Updated Feb 21, 2022Feb 21, 2022

• roh_lai

  Public
  MIT License

  •0•0•0•0•Updated Nov 15, 2021Nov 15, 2021

• HaploSoup

  Public
  Python

  •

  MIT License

  •0•1•0•0•Updated Nov 15, 2021Nov 15, 2021

• plasmodium_snp_call_pipeline_wdl

  Public
  WDL

  •0•1•2•0•Updated Oct 7, 2021Oct 7, 2021

• TOPMED_RareVariantAnalysis

  Public
  0•0•0•0•Updated Mar 29, 2021Mar 29, 2021

• genome-synthesis

  Public
  Python

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Feb 26, 2021Feb 26, 2021

• genomic-distance

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Feb 12, 2021Feb 12, 2021

• abstract-analysis

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Oct 23, 2020Oct 23, 2020