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setup.py
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import os
import setuptools
# extract version
with open(os.path.join(os.path.dirname(__file__),
"sbml2julia", "_version.py")) as f:
version = f.read().split('\n')[0].split('=')[-1].strip(' ').strip('"')
name = 'sbml2julia'
with open("README.md", encoding='utf-8') as fh:
long_description = fh.read()
# install package
setuptools.setup(
name=name,
version=version,
description='Optimization tool based on ODE discretisation.',
long_description=long_description,
long_description_content_type='text/markdown',
url="https://github.com/paulflang/" + name,
download_url='https://github.com/paulflang/' + name,
author="paulflang",
author_email="[email protected]",
license='MIT',
keywords='Parameter fitting, ODE discretization, Julia, JuMP',
packages=setuptools.find_packages(exclude=['tests', 'tests.*']),
install_requires=['cement >= 3.0.0',
'julia',
'matplotlib',
'numpy',
'openpyxl',
'pandas',
'petab',
'python-libsbml',
'scipy',
'setuptools',
],
classifiers=[
'Development Status :: 3 - Alpha',
'License :: OSI Approved :: MIT License',
'Programming Language :: Python',
'Programming Language :: Python :: 3',
'Natural Language :: English',
'Operating System :: OS Independent',
'Topic :: Scientific/Engineering :: Bio-Informatics',
],
entry_points={
'console_scripts': [
'sbml2julia = sbml2julia.__main__:main',
],
},
)