Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Separate 'Feature ID' from 'Chemical/Compound' IDs and names #75

Open
Gscorreia89 opened this issue Jun 14, 2021 · 0 comments
Open

Separate 'Feature ID' from 'Chemical/Compound' IDs and names #75

Gscorreia89 opened this issue Jun 14, 2021 · 0 comments
Labels
documentation Issues in the docstrings or documentation enhancement New feature or request Three days

Comments

@Gscorreia89
Copy link
Member

Refactor current featureMetadata fields to add improved "formal" fields for compound annotations.

The goal is to allow more text description of ion and compound ids at the same time. For example, the Feature Name/Unique ID could refer to a specific annotation: 'Histidine [M+H]+'. Then, Chemical/Compound ID and Name Fields could store unique identifiers about the annotated chemical compounds (Compound ID: CheBI/PubChem ID and 'Compound Name': Histidine.

This would require the following tasks:

  1. Refactor the feature unique primary ID 'Feature Name' to 'Feature ID'
  2. Keep 'Feature Name' as a text (or other) descriptor of a feature - ideally unique as well, but not required.
  3. Add a new 'Compound Name' and 'Compound ID' to store chemical names and their identifiers.
@Gscorreia89 Gscorreia89 added enhancement New feature or request documentation Issues in the docstrings or documentation Three days labels Jun 14, 2021
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
documentation Issues in the docstrings or documentation enhancement New feature or request Three days
Projects
None yet
Development

No branches or pull requests

1 participant