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DESCRIPTION
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DESCRIPTION
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Package: Nebulosa
Type: Package
Title: Single-Cell Data Visualisation Using Kernel Gene-Weighted Density
Estimation
Version: 1.0.1
Authors@R: c(person("Jose", "Alquicira-Hernandez",
email = "[email protected]",
role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-9049-7780")))
Description: This package provides a enhanced visualization of single-cell data
based on gene-weighted density estimation. Nebulosa recovers the
signal from dropped-out features and allows the inspection of the joint
expression from multiple features (e.g. genes). Seurat and
SingleCellExperiment objects can be used within Nebulosa.
URL: https://github.com/powellgenomicslab/Nebulosa
BugReports: https://github.com/powellgenomicslab/Nebulosa/issues
License: GPL-3
Encoding: UTF-8
Depends:
R (>= 4.0),
ggplot2,
patchwork
Imports:
SingleCellExperiment,
SummarizedExperiment,
ks,
Matrix,
stats,
methods,
ggrastr
RoxygenNote: 7.2.3
VignetteBuilder: knitr
Suggests:
testthat, BiocStyle, knitr, rmarkdown, covr, scater, scran, DropletUtils,
igraph, BiocFileCache, Seurat
biocViews:
Software, GeneExpression, SingleCell, Visualization,
DimensionReduction