Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Layering Nebulosa Visualization with Clustering Results #4

Open
mhwadsworth91 opened this issue Nov 4, 2020 · 0 comments
Open

Layering Nebulosa Visualization with Clustering Results #4

mhwadsworth91 opened this issue Nov 4, 2020 · 0 comments

Comments

@mhwadsworth91
Copy link

Hello,

Thank you for publishing this tool! I've really enjoyed how easily this package can visualize feature expression based on kernel density estimation.

Could you add a function to layer the nebulosa and clustering visualizations? While this can be accomplished using ggplot2, the code tends to be a little clunky (definitely my fault) and not readily scalable when trying to annotate datasets that are large and/or relatively complex (in that multiple cell types are present == many clusters). Having a function that easily generates this layered visualization would help cut down ggplot2 troubleshooting and better align the nebulosa and clustering results.

Thank you for your time,
Marc

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant