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Thank you for publishing this tool! I've really enjoyed how easily this package can visualize feature expression based on kernel density estimation.
Could you add a function to layer the nebulosa and clustering visualizations? While this can be accomplished using ggplot2, the code tends to be a little clunky (definitely my fault) and not readily scalable when trying to annotate datasets that are large and/or relatively complex (in that multiple cell types are present == many clusters). Having a function that easily generates this layered visualization would help cut down ggplot2 troubleshooting and better align the nebulosa and clustering results.
Thank you for your time,
Marc
The text was updated successfully, but these errors were encountered:
Hello,
Thank you for publishing this tool! I've really enjoyed how easily this package can visualize feature expression based on kernel density estimation.
Could you add a function to layer the nebulosa and clustering visualizations? While this can be accomplished using ggplot2, the code tends to be a little clunky (definitely my fault) and not readily scalable when trying to annotate datasets that are large and/or relatively complex (in that multiple cell types are present == many clusters). Having a function that easily generates this layered visualization would help cut down ggplot2 troubleshooting and better align the nebulosa and clustering results.
Thank you for your time,
Marc
The text was updated successfully, but these errors were encountered: