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qap_fn.tex
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qap_fn.tex
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%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% This is just an example/guide for you to refer to when submitting manuscripts to Frontiers, it is not mandatory to use Frontiers .cls files nor frontiers.tex %
% This will only generate the Manuscript, the final article will be typeset by Frontiers after acceptance. %
% %
% When submitting your files, remember to upload this *tex file, the pdf generated with it, the *bib file (if bibliography is not within the *tex) and all the figures.
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%% Version 3.1 Generated 2015/22/05 %%%
%%% You will need to have the following packages installed: datetime, fmtcount, etoolbox, fcprefix, which are normally inlcuded in WinEdt. %%%
%%% In http://www.ctan.org/ you can find the packages and how to install them, if necessary. %%%
\documentclass{frontiersSCNS} % for Science, Engineering and Humanities and Social Sciences articles
%\documentclass{frontiersHLTH} % for Health articles
%\documentclass{frontiersFPHY} % for Physics and Applied Mathematics and Statistics articles
%\setcitestyle{square}
\usepackage{url,hyperref,lineno,microtype}
\usepackage[onehalfspacing]{setspace}
\usepackage{graphicx}
\usepackage[tableposition = top]{caption}
\usepackage{subcaption}
\usepackage{amssymb}
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\newcommand\ccnotes[1]{\textcolor{red}{#1}}
\newcommand\todo[1]{\textcolor{red}{#1}}
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\makeatletter
\let\save@mathaccent\mathaccent
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\setbox0\hbox{${\mathaccent"0362{#1}}^H$}%
\setbox2\hbox{${\mathaccent"0362{\kern0pt#1}}^H$}%
\ifdim\ht0=\ht2 #3\else #2\fi
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%If there's a superscript following the bar, then no negative kern may follow the bar;
%an additional {} makes sure that the superscript is high enough in this case:
\newcommand*\widebar[1]{\@ifnextchar^{{\wide@bar{#1}{0}}}{\wide@bar{#1}{1}}}
%Use a separate algorithm for single symbols:
\newcommand*\wide@bar[2]{\if@single{#1}{\wide@bar@{#1}{#2}{1}}{\wide@bar@{#1}{#2}{2}}}
\newcommand*\wide@bar@[3]{%
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%Enable nesting of accents:
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%If the argument consists of more than one symbol, and if the first token is
%a letter, use that letter for the computations:
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\makeatother
% Leave a blank line between paragraphs instead of using \\
\renewcommand{\arraystretch}{1.5}
\def\keyFont{\fontsize{8}{11}\helveticabold }
\def\firstAuthorLast{Giavasis {et~al.}} %use et al only if is more than 1 author
\def\Authors{Steven Giavasis\,$^{1,2}$,
Sang Han Lee\,$^{2}$,
Zarrar Shehzad\,$^{3}$,
Oscar Esteban\,$^{4}$,
Qingyang Li\,$^{1}$,
Yassine Benhajali\,$^{5,6}$,
Chaogan Yan\,$^{7}$,
Zhen Yang\,$^{8}$,
Michael Milham\,$^{1,2}$,
Pierre Bellec\,$^{5}$,
R. Cameron Craddock\,$^{1,2,*}$
}
% Affiliations should be keyed to the author's name with superscript numbers and be listed as follows: Laboratory, Institute, Department, Organization, City, State abbreviation (USA, Canada, Australia), and Country (without detailed address information such as city zip codes or street names).
% If one of the authors has a change of address, list the new address below the correspondence details using a superscript symbol and use the same symbol to indicate the author in the author list.
\def\Address{$^{1}$Center for the Developing Brain, Child Mind Institute, New York, NY, USA \\
$^{2}$Center for Biomedical Imaging and Neuromodulation, Nathan S. Kline Institute for Psychiatric Research, Orangeburg, NY, USA \\
$^{3}$Department of Psychology, Yale University, New Haven, CT, USA \\
$^{4}$Department of Psychology, Stanford University, Stanford, CA, USA \\
$^{5}$D\'{e}partement d'anthropologie, Universit\'{e} de Montr\'{e}al, Montr\'{e}al, QC, Canada \\
$^{6}$Centre de recherche de l’institut de g\'{e}riatrie de Montr\'{e}al, Montr\'{e}al, QC, Canada \\
$^{7}$Institute of Psychology, Chinese Academy of Science, Beijing, China \\
$^{8}$Department of Psychiatry, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA}
% The Corresponding Author should be marked with an asterisk
% Provide the exact contact address (this time including street name and city zip code) and email of the corresponding author
\def\corrAuthor{R. Cameron Craddock}
\def\corrAddress{Computational Neuroimaging Laboratory, Center for Biomedical Imaging and Neuromodulation, Nathan S. Kline Institute for Psychiatric Research, 140 Old Orangeburg Road, Orangeburg, NY, 10962, USA}\def\corrEmail{[email protected]}
\begin{document}
\onecolumn
\firstpage{1}
\title[Quality Assessment Protocol]{The Preprocessed Connectomes Project Quality Assessment Protocol: a resource for measuring the quality of MRI data.}
\author[\firstAuthorLast ]{\Authors} %This field will be automatically populated
\address{} %This field will be automatically populated
\correspondance{} %This field will be automatically populated
\extraAuth{}% If there are more than 1 corresponding author, comment this line and uncomment the next one.
%\extraAuth{corresponding Author2 \\ Laboratory X2, Institute X2, Department X2, Organization X2, Street X2, City X2 , State XX2 (only USA, Canada and Australia), Zip Code2, X2 Country X2, [email protected]}
\maketitle
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%% The sections below are for reference only.
%%%
%%% For Original Research Articles, Clinical Trial Articles, and Technology Reports the section headings should be those appropriate for your field and the research itself. It is recommended to organize your manuscript in the
%%% following sections or their equivalents for your field:
%%% Abstract, Introduction, Material and Methods, Results, and Discussion.
%%% Please note that the Material and Methods section can be placed in any of the following ways: before Results, before Discussion or after Discussion.
%%%
%%%For information about Clinical Trial Registration, please go to http://www.frontiersin.org/about/AuthorGuidelines#ClinicalTrialRegistration
%%%
%%% For Clinical Case Studies the following sections are mandatory: Abstract, Introduction, Background, Discussion, and Concluding Remarks.
%%%
%%% For all other article types there are no mandatory sections.
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\begin{abstract}
%%% Leave the Abstract empty if your article falls under any of the following categories: Editorial Book Review, Commentary, Field Grand Challenge, Opinion or specialty Grand Challenge.
\section{}
%As a primary goal, the abstract should render the general significance and conceptual advance of the work clearly accessible to a broad readership. References should not be cited in the abstract.
For full guidelines regarding your manuscript please refer to \href{http://www.frontiersin.org/about/AuthorGuidelines}{Author Guidelines} for a summary according to article type.
\tiny
\keyFont{ \section{Keywords:} Text Text Text Text Text Text Text Text } %All article types: you may provide up to 8 keywords; at least 5 are mandatory.
\end{abstract}
\input{qap_intro}
\input{qap_methods}
\input{qap_results}
\input{qap_disc_conclusions}
\input{qap_endmatter}
\pagebreak
\bibliographystyle{frontiersinSCNS_ENG_HUMS} % for Science, Engineering and Humanities and Social Sciences articles, for Humanities and Social Sciences articles please include page numbers in the in-text citations
%\bibliographystyle{frontiersinHLTH&FPHY} % for Health and Physics articles
\bibliography{qap}
%%% Upload the *bib file along with the *tex file and PDF on submission if the bibliography is not in the main *tex file
\pagebreak
\section*{Figures}
%%% Use this if adding the figures directly in the mansucript, if so, please remember to also upload the files when submitting your article
%%% There is no need for adding the file termination, as long as you indicate where the file is saved. In the examples below the files (logo1.jpg and logo2.eps) are in the Frontiers LaTeX folder
%%% If using *.tif files convert them to .jpg or .png
\begin{figure}[ht!]
\begin{center}
\includegraphics[width=10cm]{logo1}% This is a *.jpg file
\end{center}
\textbf{\refstepcounter{figure}\label{fig:01} Figure \arabic{figure}.}{ Enter the caption for your figure here. Repeat as necessary for each of your figures }
\end{figure}
%\begin{figure}
%\begin{center}
%\includegraphics[width=10cm]{logo2}% This is an *.eps file
%\end{center}
%\textbf{\refstepcounter{figure}\label{fig:02} Figure \arabic{figure}.}{ Enter the caption for your figure here. Repeat as necessary for each of your figures }
%\end{figure}
%%% If you don't add the figures in the LaTeX files, please upload them when submitting the article.
%%% Frontiers will add the figures at the end of the provisional pdf automatically %%%
%%% The use of LaTeX coding to draw Diagrams/Figures/Structures should be avoided. They should be external callouts including graphics.
% \pagebreak
% \appendix
% \section*{Appendix}
\end{document}