From 0a67bfe0d8d70dc71e76560845cd3371ec7701a2 Mon Sep 17 00:00:00 2001 From: Sam Washko Date: Thu, 25 Jul 2024 13:57:30 -0400 Subject: [PATCH 1/5] python-3.12 --- .github/workflows/bandit.yml | 2 +- .github/workflows/build.yml | 2 +- .github/workflows/mypy.yml | 2 +- .github/workflows/publish.yml | 2 +- .github/workflows/test.yml | 2 +- CONTRIBUTING.md | 2 +- README.md | 2 +- poetry.lock | 1427 +++++++++++++++++---------------- pyproject.toml | 10 +- tests/test_modelscan.py | 17 +- 10 files changed, 769 insertions(+), 699 deletions(-) diff --git a/.github/workflows/bandit.yml b/.github/workflows/bandit.yml index 36ae980..7478f7b 100644 --- a/.github/workflows/bandit.yml +++ b/.github/workflows/bandit.yml @@ -13,7 +13,7 @@ jobs: - uses: actions/checkout@v4 - uses: actions/setup-python@v5 with: - python-version: "3.8" + python-version: "3.9" - uses: snok/install-poetry@v1 with: virtualenvs-create: true diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index e1c5221..4aeef87 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -19,7 +19,7 @@ jobs: fetch-depth: 0 # Necessary to get tags - uses: actions/setup-python@v5 with: - python-version: "3.8" + python-version: "3.9" - uses: snok/install-poetry@v1 with: virtualenvs-create: true diff --git a/.github/workflows/mypy.yml b/.github/workflows/mypy.yml index d0ec686..3bb20cb 100644 --- a/.github/workflows/mypy.yml +++ b/.github/workflows/mypy.yml @@ -13,7 +13,7 @@ jobs: - uses: actions/checkout@v4 - uses: actions/setup-python@v5 with: - python-version: "3.8" + python-version: "3.9" - uses: snok/install-poetry@v1 with: virtualenvs-create: true diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml index a96c328..c475611 100644 --- a/.github/workflows/publish.yml +++ b/.github/workflows/publish.yml @@ -19,7 +19,7 @@ jobs: fetch-depth: 0 # Necessary to get tags - uses: actions/setup-python@v5 with: - python-version: "3.8" + python-version: "3.9" - uses: snok/install-poetry@v1 with: virtualenvs-create: true diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index cacb16b..75ad702 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -11,7 +11,7 @@ jobs: runs-on: ubuntu-latest strategy: matrix: - python-version: ["3.8", "3.9", "3.10", "3.11"] + python-version: ["3.9", "3.10", "3.11", "3.12"] steps: - uses: actions/checkout@v4 diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md index e30fbd7..1756952 100644 --- a/CONTRIBUTING.md +++ b/CONTRIBUTING.md @@ -6,7 +6,7 @@ Welcome! We're glad to have you. If you would like to report a bug, request a ne 1. Python - `modelscan` requires python version `>=3.8` and `<3.11` + `modelscan` requires python version `>=3.9` and `<3.13` 2. Poetry diff --git a/README.md b/README.md index c54937d..89df32b 100644 --- a/README.md +++ b/README.md @@ -91,7 +91,7 @@ At present, ModelScan supports any Pickle derived format and many others: | Classic ML Libraries (Sklearn, XGBoost etc.) | pickle.dump(), dill.dump(), joblib.dump(), cloudpickle.dump() | Pickle, Cloudpickle, Dill, Joblib | Yes | ### Installation -ModelScan is installed on your systems as a Python package(Python 3.8 to 3.11 supported). As shown from above you can install +ModelScan is installed on your systems as a Python package(Python 3.9 to 3.12 supported). As shown from above you can install it by running this in your terminal: ```bash diff --git a/poetry.lock b/poetry.lock index ae55605..62fcb93 100644 --- a/poetry.lock +++ b/poetry.lock @@ -4,7 +4,7 @@ name = "absl-py" version = "2.1.0" description = "Abseil Python Common Libraries, see https://github.com/abseil/abseil-py." -optional = true +optional = false python-versions = ">=3.7" files = [ {file = "absl-py-2.1.0.tar.gz", hash = "sha256:7820790efbb316739cde8b4e19357243fc3608a152024288513dd968d7d959ff"}, @@ -125,7 +125,7 @@ frozenlist = ">=1.1.0" name = "astunparse" version = "1.6.3" description = "An AST unparser for Python" -optional = true +optional = false python-versions = "*" files = [ {file = "astunparse-1.6.3-py2.py3-none-any.whl", hash = "sha256:c2652417f2c8b5bb325c885ae329bdf3f86424075c4fd1a128674bc6fba4b8e8"}, @@ -237,17 +237,6 @@ d = ["aiohttp (>=3.7.4)", "aiohttp (>=3.7.4,!=3.9.0)"] jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"] uvloop = ["uvloop (>=0.15.2)"] 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"sphinx-lint"] -test = ["big-O", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] +test = ["big-O", "importlib-resources", "jaraco.functools", "jaraco.itertools", "jaraco.test", "more-itertools", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy", "pytest-ruff (>=0.2.1)"] [extras] h5py = ["h5py"] @@ -2317,5 +2382,5 @@ tensorflow = ["tensorflow", "tensorflow-macos"] [metadata] lock-version = "2.0" -python-versions = ">=3.8,<3.13" -content-hash = "20e1482fe5c530234417d8b96c1afebaddb66e6329e36ba4de4a2de701cbec7c" +python-versions = ">=3.9,<3.13" +content-hash = "d6bb3ae1f07c9a42be290597817a84ea91ffc78a6931006c29506c66387f3692" diff --git a/pyproject.toml b/pyproject.toml index 0fac29b..90ee919 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -12,17 +12,16 @@ exclude = ["tests/*", "Makefile"] modelscan = "modelscan.cli:main" [tool.poetry.dependencies] -python = ">=3.8,<3.13" +python = ">=3.9,<3.13" click = "^8.1.3" -numpy = "1.24.3" +numpy = ">=1.24.3" rich = "^13.4.2" tomlkit = ">=0.12.3,<0.14.0" h5py = { version = "^3.9.0", optional = true } # TODO: Add py3.12 once TF release supports -tensorflow = { version = "^2.13.0", optional = true, python = "<3.12" } -tensorflow-macos = { version = "^2.13.0", platform = "darwin", optional = true, python = "<3.12" } -tensorflow-io-gcs-filesystem = { version = ">=0.23.1,<0.35", optional = true, python = "<3.12" } +tensorflow = { version = "^2.16.2", optional = true } +tensorflow-macos = { version = "^2.16.2", platform = "darwin", optional = true } [tool.poetry.extras] tensorflow = ["tensorflow", "tensorflow-macos"] @@ -37,6 +36,7 @@ aiohttp = "^3.8.5" dill = "^0.3.7" types-requests = ">1.26" torch = "^2.1.2" +tf-keras = "^2.16.0" [tool.poetry.group.dev.dependencies] diff --git a/tests/test_modelscan.py b/tests/test_modelscan.py index 4355798..1c10a76 100644 --- a/tests/test_modelscan.py +++ b/tests/test_modelscan.py @@ -14,7 +14,7 @@ import sys import torch import tensorflow as tf -from tensorflow import keras +import tf_keras as keras from typing import Any, List, Set, Dict from test_utils import ( generate_dill_unsafe_file, @@ -325,6 +325,9 @@ def file_path(tmp_path_factory: Any) -> Any: @pytest.fixture(scope="session") def tensorflow_file_path(tmp_path_factory: Any) -> Any: + # Use Keras 2.0 + os.environ["TF_USE_LEGACY_KERAS"] = "1" + # Create a simple model. inputs = keras.Input(shape=(32,)) outputs = keras.layers.Dense(1)(inputs) @@ -340,17 +343,18 @@ def tensorflow_file_path(tmp_path_factory: Any) -> Any: tmp = tmp_path_factory.mktemp("tensorflow") safe_tensorflow_model_dir = tmp / "saved_model_safe" safe_tensorflow_model_dir.mkdir(parents=True) - tensorflow_model.save(safe_tensorflow_model_dir) + tensorflow_model.export(safe_tensorflow_model_dir) # Create an unsafe model unsafe_tensorflow_model = MaliciousModule(tensorflow_model) unsafe_tensorflow_model.build(input_shape=(32, 32)) + unsafe_tensorflow_model.predict(np.random.random((32, 32)).astype(np.float32)) # Save the unsafe model unsafe_tensorflow_model_dir = tmp / "saved_model_unsafe" unsafe_tensorflow_model_dir.mkdir(parents=True) unsafe_model_path = os.path.join(unsafe_tensorflow_model_dir) - unsafe_tensorflow_model.save(unsafe_model_path) + unsafe_tensorflow_model.export(unsafe_model_path) return safe_tensorflow_model_dir, unsafe_tensorflow_model_dir @@ -362,6 +366,9 @@ def keras_file_extensions() -> List[str]: @pytest.fixture(scope="session") def keras_file_path(tmp_path_factory: Any, keras_file_extensions: List[str]) -> Any: + # Use Keras 2.0 + os.environ["TF_USE_LEGACY_KERAS"] = "1" + # Create a simple model. inputs = keras.Input(shape=(32,)) @@ -403,7 +410,7 @@ def keras_file_path(tmp_path_factory: Any, keras_file_extensions: List[str]) -> first_lambda_layer = keras.layers.Lambda(attack)(input_to_new_layer) second_lambda_layer = keras.layers.Lambda(attack)(first_lambda_layer) - malicious_model = tf.keras.Model( + malicious_model = keras.Model( inputs=keras_model.inputs, outputs=[second_lambda_layer] ) malicious_model.compile(optimizer="adam", loss="mean_squared_error") @@ -1485,7 +1492,6 @@ def test_scan_tensorflow(tensorflow_file_path: Any) -> None: assert ms.issues.all_issues == [] assert set(results["summary"]["scanned"]["scanned_files"]) == { "fingerprint.pb", - "keras_metadata.pb", "saved_model.pb", } assert set( @@ -1527,7 +1533,6 @@ def test_scan_tensorflow(tensorflow_file_path: Any) -> None: assert ms.issues.all_issues == expected assert set(results["summary"]["scanned"]["scanned_files"]) == { "fingerprint.pb", - "keras_metadata.pb", "saved_model.pb", } assert set( From 992c46686aa337ca326458e95fe21d0284a35a8f Mon Sep 17 00:00:00 2001 From: Sam Washko Date: Thu, 25 Jul 2024 16:20:03 -0400 Subject: [PATCH 2/5] test_utils import --- tests/test_modelscan.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/tests/test_modelscan.py b/tests/test_modelscan.py index 1c10a76..5fabedf 100644 --- a/tests/test_modelscan.py +++ b/tests/test_modelscan.py @@ -16,7 +16,7 @@ import tensorflow as tf import tf_keras as keras from typing import Any, List, Set, Dict -from test_utils import ( +from tests.test_utils import ( generate_dill_unsafe_file, generate_unsafe_pickle_file, MaliciousModule, From e23bca2493d5ff21efc54ce0eec585c5c107079e Mon Sep 17 00:00:00 2001 From: Sam Washko Date: Thu, 25 Jul 2024 16:23:34 -0400 Subject: [PATCH 3/5] tf_keras in test_utils --- tests/test_modelscan.py | 2 +- tests/test_utils.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/tests/test_modelscan.py b/tests/test_modelscan.py index 5fabedf..1c10a76 100644 --- a/tests/test_modelscan.py +++ b/tests/test_modelscan.py @@ -16,7 +16,7 @@ import tensorflow as tf import tf_keras as keras from typing import Any, List, Set, Dict -from tests.test_utils import ( +from test_utils import ( generate_dill_unsafe_file, generate_unsafe_pickle_file, MaliciousModule, diff --git a/tests/test_utils.py b/tests/test_utils.py index 52a195c..15236d7 100644 --- a/tests/test_utils.py +++ b/tests/test_utils.py @@ -6,7 +6,7 @@ import torch import torch.nn as nn import tensorflow as tf -from tensorflow import keras +import tf_keras as keras class MaliciousModule(keras.Model): # type: ignore From 1d0a35b31e2efbea4dd2ca136076e11cd59eced2 Mon Sep 17 00:00:00 2001 From: Sam Washko Date: Thu, 25 Jul 2024 16:40:46 -0400 Subject: [PATCH 4/5] bump torch, revert to save --- poetry.lock | 169 ++++++++++++---------------------------- pyproject.toml | 5 +- tests/test_modelscan.py | 10 +-- 3 files changed, 57 insertions(+), 127 deletions(-) diff --git a/poetry.lock b/poetry.lock index 62fcb93..25e7234 100644 --- a/poetry.lock +++ b/poetry.lock @@ -941,28 +941,28 @@ files = [ 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[tool.poetry.extras] -tensorflow = ["tensorflow", "tensorflow-macos"] +tensorflow = ["tensorflow"] h5py = ["h5py"] [tool.poetry.group.test.dependencies] @@ -35,7 +34,7 @@ requests = "^2.31.0" aiohttp = "^3.8.5" dill = "^0.3.7" types-requests = ">1.26" -torch = "^2.1.2" +torch = "^2.2" tf-keras = "^2.16.0" diff --git a/tests/test_modelscan.py b/tests/test_modelscan.py index 1c10a76..0953ad3 100644 --- a/tests/test_modelscan.py +++ b/tests/test_modelscan.py @@ -325,9 +325,6 @@ def file_path(tmp_path_factory: Any) -> Any: @pytest.fixture(scope="session") def tensorflow_file_path(tmp_path_factory: Any) -> Any: - # Use Keras 2.0 - os.environ["TF_USE_LEGACY_KERAS"] = "1" - # Create a simple model. inputs = keras.Input(shape=(32,)) outputs = keras.layers.Dense(1)(inputs) @@ -343,18 +340,17 @@ def tensorflow_file_path(tmp_path_factory: Any) -> Any: tmp = tmp_path_factory.mktemp("tensorflow") safe_tensorflow_model_dir = tmp / "saved_model_safe" safe_tensorflow_model_dir.mkdir(parents=True) - tensorflow_model.export(safe_tensorflow_model_dir) + tensorflow_model.save(safe_tensorflow_model_dir) # Create an unsafe model unsafe_tensorflow_model = MaliciousModule(tensorflow_model) unsafe_tensorflow_model.build(input_shape=(32, 32)) - unsafe_tensorflow_model.predict(np.random.random((32, 32)).astype(np.float32)) # Save the unsafe model unsafe_tensorflow_model_dir = tmp / "saved_model_unsafe" unsafe_tensorflow_model_dir.mkdir(parents=True) unsafe_model_path = os.path.join(unsafe_tensorflow_model_dir) - unsafe_tensorflow_model.export(unsafe_model_path) + unsafe_tensorflow_model.save(unsafe_model_path) return safe_tensorflow_model_dir, unsafe_tensorflow_model_dir @@ -1492,6 +1488,7 @@ def test_scan_tensorflow(tensorflow_file_path: Any) -> None: assert ms.issues.all_issues == [] assert set(results["summary"]["scanned"]["scanned_files"]) == { "fingerprint.pb", + "keras_metadata.pb", "saved_model.pb", } assert set( @@ -1533,6 +1530,7 @@ def test_scan_tensorflow(tensorflow_file_path: Any) -> None: assert ms.issues.all_issues == expected assert set(results["summary"]["scanned"]["scanned_files"]) == { "fingerprint.pb", + "keras_metadata.pb", "saved_model.pb", } assert set( From 33a553c9693041bf3b2158361c2bbb8f33072b1c Mon Sep 17 00:00:00 2001 From: Sam Washko Date: Fri, 26 Jul 2024 12:19:29 -0400 Subject: [PATCH 5/5] tf 2.17 --- poetry.lock | 2 +- pyproject.toml | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/poetry.lock b/poetry.lock index 25e7234..e0cd432 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2316,4 +2316,4 @@ tensorflow = ["tensorflow"] [metadata] lock-version = "2.0" python-versions = ">=3.9,<3.13" -content-hash = "7773fbf381d9728ae95dccfe68bee21c6b0c2547d4418abaef8d7fad8cf146e5" +content-hash = "0f63a0c5b209d3634c1e2fbd9e0ccf6086d90fa6a4b95769f191a4f8ea51d9ba" diff --git a/pyproject.toml b/pyproject.toml index 816e53e..0748d56 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -20,7 +20,7 @@ tomlkit = ">=0.12.3,<0.14.0" h5py = { version = "^3.9.0", optional = true } # TODO: Add py3.12 once TF release supports -tensorflow = { version = "^2.16.2", optional = true } +tensorflow = { version = "^2.17", optional = true } [tool.poetry.extras] tensorflow = ["tensorflow"]