test.yml

name: Test workflows

on:
  push:
    branches:
    - main
  pull_request:
    branches:
    - main
  schedule:
  - cron: "0 5 * * TUE"

# Cancel any in-progress runs when a new run is triggered
concurrency:
  group: ${{ github.workflow }}-${{ github.ref }}
  cancel-in-progress: true

env:
  CACHE_NUMBER: 0  # Change this value to manually reset the environment cache

jobs:
  run-tests:
    name: OS
    runs-on: ${{ matrix.os }}-latest
    strategy:
      fail-fast: false
      matrix:
        os: [ubuntu, macos] #, windows]
        include:
        - os: ubuntu
          env_file: envs/linux-pinned.yaml
        - os: macos
          env_file: envs/macos-pinned.yaml
        # - os: windows
        #   env_file: envs/windows-pinned.yaml

    defaults:
      run:
        shell: bash -l {0}

    steps:
    - uses: actions/checkout@v4


    - name: Setup micromamba
      uses: mamba-org/setup-micromamba@v2
      with:
        micromamba-version: '1.5.9-1'
        environment-file: ${{ matrix.env_file }}
        log-level: debug
        init-shell: bash
        cache-environment: true
        cache-downloads: true


    - name: Set cache dates
      run: |
        echo "WEEK=$(date +'%Y%U')" >> $GITHUB_ENV

    - name: Cache data and cutouts folders
      uses: actions/cache@v4
      with:
        path: |
          data
          cutouts
        key: data-cutouts-${{ env.WEEK }}-${{ env.CACHE_NUMBER }}


    - name: Micromamba list
      run: micromamba list

    - name: Run Test
      run: make test

    - name: Upload artifacts
      if: always()
      uses: actions/upload-artifact@v4
      with:
        name: results-${{ matrix.os }}
        path: |
          logs
          .snakemake/log
          results
        retention-days: 3

      # - name: Test plotting and summaries
      #   run: |
      #     snakemake --cores all plot_all_p_nom
      #     snakemake --cores all plot_all_summaries
      #     snakemake --cores all make_all_summaries
      #     rm -rf resources/*.nc resources/*.geojson resources/*.h5 networks results