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After running a test recieving parsing error #588

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cap-jmk opened this issue Mar 25, 2023 · 0 comments
Open

After running a test recieving parsing error #588

cap-jmk opened this issue Mar 25, 2023 · 0 comments

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@cap-jmk
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cap-jmk commented Mar 25, 2023

Summary

Expected vs actual result

Have a coverage output

Reproducer

Clone carate repo

Run

git clone https://codeberg.org/sail.black/carate.git
git checkout dev
pip install -e . 
pytest tests/

Versions

amarium                  0.1.4
astroid                  2.15.0
attrs                    22.2.0
autopep8                 2.0.2
black                    23.1.0
bleach                   6.0.0
build                    0.10.0
carate                   0.2.6      /home/developer/carate
certifi                  2022.12.7
cffi                     1.15.1
charset-normalizer       2.1.1
click                    8.1.3
cmake                    3.26.1
contourpy                1.0.7
coverage                 7.2.2
cryptography             40.0.1
cycler                   0.11.0
dill                     0.3.6
docformatter             1.5.1
docutils                 0.19
emoji                    2.2.0
exceptiongroup           1.1.1
filelock                 3.10.4
flake8                   6.0.0
fonttools                4.39.2
idna                     3.4
importlib-metadata       6.1.0
iniconfig                2.0.0
isort                    5.12.0
jaraco.classes           3.2.3
jeepney                  0.8.0
Jinja2                   3.1.2
joblib                   1.2.0
keyring                  23.13.1
kiwisolver               1.4.4
lazy-object-proxy        1.9.0
lit                      16.0.0
markdown-it-py           2.2.0
MarkupSafe               2.1.2
matplotlib               3.7.1
mccabe                   0.7.0
mdurl                    0.1.2
more-itertools           9.1.0
mpmath                   1.3.0
mypy                     1.1.1
mypy-extensions          1.0.0
networkx                 3.0
numpy                    1.24.2
nvidia-cublas-cu11       11.10.3.66
nvidia-cuda-cupti-cu11   11.7.101
nvidia-cuda-nvrtc-cu11   11.7.99
nvidia-cuda-runtime-cu11 11.7.99
nvidia-cudnn-cu11        8.5.0.96
nvidia-cufft-cu11        10.9.0.58
nvidia-curand-cu11       10.2.10.91
nvidia-cusolver-cu11     11.4.0.1
nvidia-cusparse-cu11     11.7.4.91
nvidia-nccl-cu11         2.14.3
nvidia-nvtx-cu11         11.7.91
packaging                23.0
pandas                   1.5.3
pathspec                 0.11.1
Pillow                   9.4.0
pip                      22.0.2
pkginfo                  1.9.6
platformdirs             3.1.1
pluggy                   1.0.0
prettify-py              0.2.3.12
psutil                   5.9.4
pycodestyle              2.10.0
pycparser                2.21
pyflakes                 3.0.1
Pygments                 2.14.0
pylint                   2.17.1
pyparsing                3.0.9
pyproject_hooks          1.0.0
pytest                   7.2.2
pytest-cov               4.0.0
python-dateutil          2.8.2
pytz                     2023.2
rdkit-pypi               2022.9.5
readme-renderer          37.3
requests                 2.28.2
requests-toolbelt        0.10.1
rfc3986                  2.0.0
rich                     13.3.2
scikit-learn             1.2.2
scipy                    1.10.1
SecretStorage            3.3.3
setuptools               59.6.0
six                      1.16.0
spawn-lia                0.1.17
sympy                    1.11.1
threadpoolctl            3.1.0
tomli                    2.0.1
tomlkit                  0.11.6
torch                    1.13.1
torch-cluster            1.6.1
torch-geometric          2.3.0
torch-scatter            2.1.1
torch-scatter-carate     2.1.1
torch-sparse             0.6.17
torch-sparse-carate      0.6.17
torch-spline-conv        1.2.2
torchaudio               0.13.1
torchvision              0.14.1
tqdm                     4.65.0
triton                   2.0.0
twine                    4.0.2
typing_extensions        4.5.0
untokenize               0.1.1
urllib3                  1.26.15
webencodings             0.5.1
wheel                    0.40.0
wrapt                    1.15.0
zipp                     3.15.0

Config

[coverage:run]
branch = True
omit = dist/*, docs/*, notebooks/*, plots/*, tests/*, venv/*  # define paths to omit

[coverage:report]
show_missing = True
skip_covered = True

[tool:pytest]
addopts = -v --cov-report term --cov-report html:htmlcov --cov-report xml --cov-fail-under=0 --cov=carate

Yields the error

INTERNALERROR>     raise DataError("Can't combine line data with arc data")
INTERNALERROR> coverage.exceptions.DataError: Can't combine line data with arc data
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