BEDQC is a tool to validate and profile genomic intervals in BED format.
Once you upload a file to BEDQC, it will automatically
compare your file to the BED specifications, including
checking the delimiter and line endings. A count
of intervals and their lengths will also tabulated
and presented. No data is transferred from your local environment.
Once a BED file is uploaded, you can choose to perform more complex tasks on your BED file including calculating metrics based on the intervals and intersecting your file with various other annotations. For instance, since most annotations will not overlap gaps in the same genome build, you can use this tool to help determine your file's genome build comparing to gaps from various builds to find which has the fewest intersecting hits.
This tool utilizes the biowasm project to execute bedtools in the browser.