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QuPath

Open source software for bioimage analysis
README.md

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  1. qupath qupath Public

    QuPath - Open-source bioimage analysis for research

    Java 1.1k 282

  2. qupath-docs qupath-docs Public

    QuPath documentation

    Python 17 22

  3. qupath-extension-stardist qupath-extension-stardist Public

    QuPath extension to run StarDist nucleus detection

    Java 35 6

  4. qupath-extension-djl qupath-extension-djl Public

    A QuPath extension for working with Deep Java Library (https://djl.ai)

    Java 6 4

  5. qupath-extension-omero-web qupath-extension-omero-web Public

    QuPath extension to work with images through OMERO's web API

    Java 8 12

  6. qupath-extension-bioimageio qupath-extension-bioimageio Public

    A QuPath extension for working with the Bioimage Model Zoo (https://bioimage.io)

    Java 4 3

Repositories

Showing 10 of 41 repositories
  • qupath Public

    QuPath - Open-source bioimage analysis for research

    qupath/qupath’s past year of commit activity
    Java 1,067 GPL-3.0 282 42 6 Updated Nov 29, 2024
  • qupath-gradle-plugin Public

    Gradle plugins to help create QuPath extensions

    qupath/qupath-gradle-plugin’s past year of commit activity
    Java 0 Apache-2.0 1 0 0 Updated Nov 29, 2024
  • qubalab Public

    Lab for quantitative bioimage analysis experiments in Python

    qupath/qubalab’s past year of commit activity
    Python 8 Apache-2.0 3 0 0 Updated Nov 27, 2024
  • qupath-extension-instanseg Public

    The official QuPath extension for InstanSeg

    qupath/qupath-extension-instanseg’s past year of commit activity
    Java 10 Apache-2.0 5 4 2 Updated Nov 26, 2024
  • i2k-qupath-for-python-programmers Public
    qupath/i2k-qupath-for-python-programmers’s past year of commit activity
    Jupyter Notebook 6 Apache-2.0 1 0 0 Updated Nov 25, 2024
  • qupath-extension-training Public

    A QuPath extension to help with learning the software

    qupath/qupath-extension-training’s past year of commit activity
    Java 1 Apache-2.0 2 0 0 Updated Nov 25, 2024
  • qupath-extension-omero Public

    QuPath extension to work with images through OMERO's APIs

    qupath/qupath-extension-omero’s past year of commit activity
    Java 4 Apache-2.0 1 26 1 Updated Nov 15, 2024
  • c-blosc-jars Public

    JAR files for the c-blosc native library.

    qupath/c-blosc-jars’s past year of commit activity
    1 1 0 0 Updated Nov 12, 2024
  • qubalab-docs Public
    qupath/qubalab-docs’s past year of commit activity
    HTML 0 Apache-2.0 0 0 0 Updated Nov 11, 2024
  • i2k2024 Public
    qupath/i2k2024’s past year of commit activity
    Groovy 2 2 0 1 Updated Oct 29, 2024
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