TODO

TODO add noisy-min/max
calcNoisyMinTable <-
  function (skillLevels,obsLevels, bypass,
            noSlip=rep(1,length(obsLevels-1))) {
  pdims <- sapply(skillLevels,length)
  ## Logical values indicating if each value has met the threshold.
  svals <- vector("list",length(skillLevels))
  for (j in 1:length(skillLevels)) {
    svals[[j]] <- rev(cumsum(rev(skillLevels[[j]]==thresholds[j])))
  }
  ss <- as.matrix(do.call("expand.grid",svals))
  rr <- sweep(ss,2,bypass,function(s,r) ifelse(s,1,r))
  probs <- noSlip*apply(rr,1,prod)
  probs <- cbind(probs,1-probs)
  colnames(probs)<-obsLevels
  probs
}

  Missing link or links in documentation object 'LanguageData.Rd':
     ‘[Peanut]{NetworkTester}’
   

TODO add softmax link


TODO docs for ciTest, localDepTest, 
  ‘ciTest’ ‘‘localDepTest’ 

TODO -- check state orders in barplot.CPF


TODO -- reverse state order

TODO -- better error messages when parent names doen't match expected
values (Pnet2Qmat)

* getNonOffsetRule

TODO -- vignettes

TODO -- need to better understand convergence of the mapGPC algorithm.