Merge pull request #150 from AQLT/develop #86
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on: | |
push: | |
branches: | |
- develop | |
- master | |
pull_request: | |
branches: | |
- develop | |
- master | |
name: R-CMD-check | |
jobs: | |
R-CMD-check: | |
runs-on: ${{ matrix.config.os }} | |
name: ${{ matrix.config.os-name }}, R ${{ matrix.config.r }}, Java ${{ matrix.config.java }} | |
strategy: | |
fail-fast: false | |
matrix: | |
config: | |
- {os: windows-latest, r: 'release', java: 12, os-name: windows} | |
- {os: windows-latest, r: 'devel', java: 12, os-name: windows} | |
#- {os: windows-latest, r: 'oldrel', java: 12, os-name: windows} | |
- {os: macOS-latest, r: 'release', java: 13, os-name: macos} | |
- {os: macOS-latest, r: 'devel', java: 17, os-name: macos} | |
#- {os: macOS-latest, r: 'oldrel', java: 12, os-name: macos} | |
- {os: windows-latest, r: 'devel', java: 17, os-name: windows} | |
#- {os: ubuntu-20.04, r: 'release', java: 12,os-name: ubuntu} | |
#- {os: ubuntu-20.04, r: 'devel', java: 12,os-name: ubuntu} | |
#- {os: ubuntu-20.04, r: 'release', java: 16,os-name: ubuntu} | |
steps: | |
- uses: actions/checkout@v2 | |
- uses: actions/setup-java@v4 | |
with: | |
distribution: 'zulu' | |
java-version: ${{ matrix.config.java }} | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
r-version: ${{ matrix.config.r }} | |
- name: Info | |
run: "bash -c 'java -version && which java && echo $PATH && echo $JAVA_HOME'" | |
- name: Setup R Java support | |
if: runner.os != 'Windows' | |
run: "echo export PATH=$PATH > reconf.sh; echo export JAVA_HOME=$JAVA_HOME >> reconf.sh; echo R CMD javareconf >> reconf.sh; sudo bash reconf.sh" | |
- name: print effective R version | |
run: version | |
shell: Rscript {0} | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- name: Query dependencies | |
run: | | |
install.packages('remotes') | |
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
shell: Rscript {0} | |
- name: Restore R package cache | |
uses: actions/cache@v2 | |
with: | |
path: ${{ env.R_LIBS_USER }} | |
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
- name: Install system dependencies | |
if: runner.os == 'Linux' | |
run: | | |
while read -r cmd | |
do | |
eval sudo $cmd | |
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))') | |
- name: Install dependencies | |
run: | | |
remotes::install_deps(dependencies = TRUE) | |
remotes::install_cran("rcmdcheck") | |
shell: Rscript {0} | |
- name: Check | |
env: | |
_R_CHECK_CRAN_INCOMING_REMOTE_: false | |
run: | | |
options(crayon.enabled = TRUE) | |
rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran", "--no-multiarch", "--run-donttest"), error_on = "warning", check_dir = "check") | |
shell: Rscript {0} | |
- name: Upload check results | |
if: failure() | |
uses: actions/upload-artifact@main | |
with: | |
name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
path: check |