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Merge pull request #155 from AQLT/develop #92

Merge pull request #155 from AQLT/develop

Merge pull request #155 from AQLT/develop #92

Workflow file for this run

on:
push:
branches:
- develop
- master
pull_request:
branches:
- develop
- master
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os-name }}, R ${{ matrix.config.r }}, Java ${{ matrix.config.java }}
strategy:
fail-fast: false
matrix:
config:
- {os: windows-latest, r: 'release', java: 12, os-name: windows}
- {os: windows-latest, r: 'devel', java: 12, os-name: windows}
#- {os: windows-latest, r: 'oldrel', java: 12, os-name: windows}
- {os: macOS-latest, r: 'release', java: 13, os-name: macos}
- {os: macOS-latest, r: 'devel', java: 17, os-name: macos}
#- {os: macOS-latest, r: 'oldrel', java: 12, os-name: macos}
- {os: windows-latest, r: 'devel', java: 17, os-name: windows}
#- {os: ubuntu-20.04, r: 'release', java: 12,os-name: ubuntu}
#- {os: ubuntu-20.04, r: 'devel', java: 12,os-name: ubuntu}
#- {os: ubuntu-20.04, r: 'release', java: 16,os-name: ubuntu}
steps:
- uses: actions/checkout@v2
- uses: actions/setup-java@v4
with:
distribution: 'zulu'
java-version: ${{ matrix.config.java }}
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
- name: Info
run: "bash -c 'java -version && which java && echo $PATH && echo $JAVA_HOME'"
- name: Setup R Java support
if: runner.os != 'Windows'
run: "echo export PATH=$PATH > reconf.sh; echo export JAVA_HOME=$JAVA_HOME >> reconf.sh; echo R CMD javareconf >> reconf.sh; sudo bash reconf.sh"
- name: print effective R version
run: version
shell: Rscript {0}
- uses: r-lib/actions/setup-pandoc@v2
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Restore R package cache
uses: actions/cache@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install system dependencies
if: runner.os == 'Linux'
run: |
while read -r cmd
do
eval sudo $cmd
done < <(Rscript -e 'writeLines(remotes::system_requirements("ubuntu", "20.04"))')
- name: Install dependencies
run: |
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
shell: Rscript {0}
- name: Check
env:
_R_CHECK_CRAN_INCOMING_REMOTE_: false
run: |
options(crayon.enabled = TRUE)
rcmdcheck::rcmdcheck(args = c("--no-manual", "--as-cran", "--no-multiarch", "--run-donttest"), error_on = "warning", check_dir = "check")
shell: Rscript {0}
- name: Upload check results
if: failure()
uses: actions/upload-artifact@main
with:
name: ${{ runner.os }}-r${{ matrix.config.r }}-results
path: check