iterated.qmd

---
title: "Iterated filtering: principles and practice"
author: Qianying (Ruby) Lin, Spencer J. Fox, Zian (Larry) Zhuang
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|                              |                                                                                       |
|-----------------------------------|--------------------------------------------------------------------------------------------|
| Lecture slides | [PDF](slides/mif/main.pdf) |
| Reference Recording (2020,2021) | [Video (110 min)](https://www.youtube.com/playlist?list=PLluGwj6FGt2S9cNE-rD3CZJY6X_KydOMi) |
| Quiz | [PDF](slides/mif/quiz.pdf) |
| **Data** for the lesson | [data](slides/mif/Measles_Consett_1948.csv)|
| **R** script for the Measles SIR model | [**R**](slides/mif/model_measSIR.R)|
| **R** script for the lesson | [**R**](slides/mif/main.R) |
| Workflow slides | [PDF](slides/mif/workflow.pdf) |
| **R** script for the workflow | [**R**](slides/mif/workflow.R) |
| Windows-safe **R** script for the lesson | [**R**](slides/mif/main_win.R) |
| Supplement: Tuning IF2 | [HTML](slides/mif/if2_settings.html) |
| Worked solution to Exercise 4.1 | [HTML](slides/mif/Q_fit_seir.html) |
| Worked solution to Exercise 4.2 | [HTML](slides/mif/Q_fit_all.html) |


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