From 634c29c97c3ce5ceb693348935a32cd7df0d1e53 Mon Sep 17 00:00:00 2001 From: Christina Schmidt Date: Thu, 14 Nov 2024 10:51:32 +0100 Subject: [PATCH] Updated example of MCA_2Cond() --- R/MetaboliteClusteringAnalysis.R | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/R/MetaboliteClusteringAnalysis.R b/R/MetaboliteClusteringAnalysis.R index 361c163..50418f3 100644 --- a/R/MetaboliteClusteringAnalysis.R +++ b/R/MetaboliteClusteringAnalysis.R @@ -435,7 +435,11 @@ MCA_2Cond <- function(InputData_C1, #' SettingsInfo = c(Conditions = "Conditions", Biological_Replicates = "Biological_Replicates", CoRe_norm_factor = "GrowthFactor", CoRe_media = "blank"), #' CoRe=TRUE) #' -#' MediaDMA <- MetaProViz::DMA(InputData=ResM[["DF"]][["Preprocessing_output"]][ ,-c(1:4)], SettingsFile_Sample=ResM[["DF"]][["Preprocessing_output"]][ , c(1:4)], SettingsInfo = c(Conditions = "Conditions", Numerator = NULL, Denominator = "HK2"), CoRe=TRUE) +#' MediaDMA <- MetaProViz::DMA(InputData=ResM[["DF"]][["Preprocessing_output"]][ ,-c(1:4)], +#' SettingsFile_Sample=ResM[["DF"]][["Preprocessing_output"]][ , c(1:4)], +#' SettingsInfo = c(Conditions = "Conditions", Numerator = NULL, Denominator = "HK2"), +#' StatPval ="aov", +#' CoRe=TRUE) #' #' IntraDMA <- MetaProViz::ToyData(Data="IntraCells_DMA") #'