Broken URL for example expression data

[yasharw]

Hi all,

I'm making my way through the vignette. When I try loading the example expression data from its URL (lines 130-133), I'm getting an Error 404 not found. The other two URLs seem to work fine.

Thanks in advance for your help!

-Will

[adc0032]

Hi!
I was hoping to use the benchmarking vingette, but it seems the data hosted on google drive is not accessible.
Is there any plan to do so?

[PauBadiaM]

Sorry for the delayed response, somehow I missed your issue @yasharw, thanks to @adc0032 comment I got notified. The original benchmark data from the publication can be accessed from the manuscript's Zenodo: https://zenodo.org/record/5645208
However, I would recommend to use a new benchmark dataset that has more coverage than the one we used for our publication. Here we showcase how to use the new one (it is in Python though): https://decoupler-py.readthedocs.io/en/latest/notebooks/benchmark.html
If that is an issue, you could always download the new benchmark dataset from Zenodo and run it in R: https://zenodo.org/record/7035528/
Hope this is helpful!