removed rpy2 and moved to actions menu

saezlab · May 7, 2024 · 109188c · 109188c
1 parent 505969b
commit 109188c
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diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -15,6 +15,7 @@ jobs:
         environment-file: environment.yml
     - name: Install additional dependencies
       run: |
+        pip install rpy2
         pip install git+https://github.com/saezlab/corneto.git@dev .
     - name: Lint with flake8
       run: |

diff --git a/environment.yml b/environment.yml
@@ -1,4 +1,4 @@
-name: networkcommons
+name: networkcommons_test
 channels:
   - bioconda
   - r
@@ -25,7 +25,6 @@ dependencies:
       - pytest==8.2.0
       - pytest-cov==5.0.0
       - requests==2.31.0
-      - rpy2==3.5.16
       - ruamel-yaml==0.18.6
       - ruamel-yaml-clib==0.2.8
       - scipy==1.11.4