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Raxml zombie process #37

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Raxml zombie process #37

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2 changes: 2 additions & 0 deletions sate/tools.py
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Original file line number Diff line number Diff line change
Expand Up @@ -26,6 +26,7 @@
import time
import platform
import shutil
import random

from alignment import Alignment
from sate import get_logger, GLOBAL_DEBUG, SATE_SYSTEM_PATHS_CFGFILE, DEFAULT_MAX_MB
Expand Down Expand Up @@ -794,6 +795,7 @@ def create_job(self, alignment, starting_tree=None, name='default', **kwargs):
'-n', name,
'-q', parfn,
'-s', seqfn,
'-p', str(random.randint(1,1000000000)),
# '-M', # Branch length estimates per partition
]
#x = open(parfn).readlines()
Expand Down