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"If you are running on Windows, please replace 'pymol' in the following lines by the path to your PyMOL executable, such as 'C:\\ProgramData\\PyMOL\\Scripts\\pymol.exe'.",
"Also replace 'mkdssp' in the following lines by the path to the DSSP executable file (only needed with --ssa dssp).",
"Unrooted paths are interpreted as starting in the directory where this configuration file is located."