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CMakeLists.txt
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cmake_minimum_required(VERSION 3.10 FATAL_ERROR)
project(h5bench)
# cmake_policy(SET CMP0074 NEW)
# Dependency: MPI
find_package(MPI REQUIRED)
include_directories(SYSTEM /usr/local/include)#for MPI
# Dependency: HDF5
set(HDF5_HOME $ENV{HDF5_HOME})
set(CMAKE_PREFIX_PATH ${HDF5_HOME})
find_package(HDF5 REQUIRED)
message(STATUS "Using HDF5 version: ${HDF5_VERSION}")
include_directories(${HDF5_HOME}/include)
link_directories(${HDF5_HOME}/lib)
# Dependency: VOL Async
set(ASYNC_HOME $ENV{ASYNC_HOME})
option(WITH_ASYNC_VOL "" OFF)
if(WITH_ASYNC_VOL)
if(${HDF5_VERSION} VERSION_GREATER_EQUAL "1.13.0")
add_definitions(-DUSE_ASYNC_VOL)
include_directories(${ASYNC_HOME})
link_directories(${ASYNC_HOME})
message(STATUS "VOL ASYNC: ENABLED")
else()
message(SEND_ERROR "VOL ASYNC requires HDF5 1.13.0 or newer.")
endif()
endif()
# =========== Utilility libs ==============
set(h5bench_util_src
commons/h5bench_util.c
commons/h5bench_util.h
)
add_library(h5bench_util ${h5bench_util_src})
if(WITH_ASYNC_VOL)
target_link_libraries(h5bench_util asynchdf5 h5async)
endif()
# =================================================================
# =========== Build h5bench_patterns: h5bench_write and h5bench_read ===========
set(h5bench_write_src h5bench_patterns/h5bench_write.c)
set(h5bench_read_src h5bench_patterns/h5bench_read.c)
add_executable(h5bench_write ${h5bench_write_src})
target_link_libraries(h5bench_write h5bench_util hdf5 z MPI::MPI_C)
add_executable(h5bench_read ${h5bench_read_src})
target_link_libraries(h5bench_read h5bench_util hdf5 z MPI::MPI_C)
# =========== Build exerciser ===========
set(exerciser_src exerciser/h5bench_exerciser.c)
add_executable(h5bench_exerciser ${exerciser_src})
target_link_libraries(h5bench_exerciser hdf5 z m MPI::MPI_C)
# =========== Build metadata stress test: hdf5_iotest ===========
set(meta_stress_src
metadata_stress/hdf5_iotest.c
metadata_stress/configuration.c
metadata_stress/configuration.h
metadata_stress/dataset.c
metadata_stress/dataset.h
metadata_stress/ini.c
metadata_stress/ini.h
)
add_executable(h5bench_hdf5_iotest ${meta_stress_src})
target_link_libraries(h5bench_hdf5_iotest h5bench_util hdf5 z m MPI::MPI_C)
# =========== Streaming (append) test: h5bench_vl_stream ===========
#message("============== Build without USE_DEV_VL ==============")
#add_executable(h5bench_vl_stream_hl streaming/h5bench_vl_stream.c)
#target_link_libraries(h5bench_vl_stream_hl h5bench_util hdf5 hdf5_hl z)
#set(HDF5_VL_HOME $ENV{HDF5_VL_HOME})
#include_directories(${HDF5_VL_HOME}/include)
#link_directories(${HDF5_VL_HOME}/lib)
#find_package(HDF5 1.13.0)
# message("============== Build with USE_DEV_VL ==============")
# set(HDF5_VL_HOME $ENV{HDF5_VL_HOME})
# include_directories(${HDF5_VL_HOME}/include)
# link_directories(${HDF5_VL_HOME}/lib)
# message("hdf5 home path = ${HDF5_VL_HOME}")
# add_executable(h5bench_vl_stream_lib streaming/h5bench_vl_stream.c)
# target_compile_definitions(h5bench_vl_stream_lib PUBLIC -DDEV_VL)
# target_link_libraries(h5bench_vl_stream_lib h5bench_util ${HDF5_VL_HOME}/lib/libhdf5.a z)
# install(TARGET h5bench_vl_stream_lib DESTINATION bin)
#endif()
# =========== Build AMReX ===========
set(AMReX_HDF5 YES)
set(AMReX_PARTICLES YES)
set(AMReX_MPI_THREAD_MULTIPLE YES)
add_subdirectory(amrex)
set(amrex_src amrex/Tests/HDF5Benchmark/main.cpp)
add_executable(h5bench_amrex_sync ${amrex_src})
target_link_libraries(h5bench_amrex_sync hdf5 z m amrex MPI::MPI_C)
if(WITH_ASYNC_VOL)
set(AMReX_HDF5_ASYNC YES)
add_executable(h5bench_amrex_async ${amrex_src})
target_link_libraries(h5bench_amrex_async hdf5 z m amrex asynchdf5 h5async MPI::MPI_C)
endif()
configure_file(${CMAKE_SOURCE_DIR}/h5bench ${CMAKE_BINARY_DIR}/h5bench COPYONLY)
# =================================================================
# =========== Build OpenPMD ===========
set(openPMD_USE_MPI ON)
set(openPMD_USE_HDF5 ON)
set(openPMD_USE_ADIOS1 OFF)
set(openPMD_USE_ADIOS2 OFF)
set(openPMD_USE_JSON OFF)
set(openPMD_USE_PYTHON OFF)
set(openPMD_INSTALL OFF)
set(openPMD_BUILD_TESTING OFF)
set(openPMD_BUILD_EXAMPLES OFF)
set(openPMD_BUILD_CLI_TOOLS OFF)
add_subdirectory(openpmd)
add_executable(h5bench_openpmd_write openpmd/examples/8a_benchmark_write_parallel.cpp)
target_link_libraries(h5bench_openpmd_write openPMD hdf5 MPI::MPI_C)
set_target_properties(h5bench_openpmd_write PROPERTIES
CXX_EXTENSIONS OFF
CXX_STANDARD_REQUIRED ON
RUNTIME_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}"
)
add_executable(h5bench_openpmd_read openpmd/examples/8b_benchmark_read_parallel.cpp)
target_link_libraries(h5bench_openpmd_read openPMD hdf5 MPI::MPI_C)
set_target_properties(h5bench_openpmd_read PROPERTIES
CXX_EXTENSIONS OFF
CXX_STANDARD_REQUIRED ON
RUNTIME_OUTPUT_DIRECTORY "${CMAKE_BINARY_DIR}"
)
configure_file(${CMAKE_SOURCE_DIR}/h5bench ${CMAKE_BINARY_DIR}/h5bench COPYONLY)
# =================================================================
# =========== Install binaries ===========
install(
FILES
h5bench
PERMISSIONS OWNER_EXECUTE OWNER_WRITE OWNER_READ
DESTINATION bin
)
install(TARGETS
h5bench_write
h5bench_read
h5bench_exerciser
h5bench_hdf5_iotest
h5bench_openpmd_write
h5bench_openpmd_read
h5bench_amrex_sync
#h5bench_vl_stream_hl
DESTINATION bin
)
if(WITH_ASYNC_VOL)
install(TARGETS
h5bench_amrex_async
DESTINATION bin
)
endif()