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event.m
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event.m
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% Defines the class event.
%
% Author: Nima Bigdely Shamlo, Alejandro Ojeda, SCCN, INC, UCSD
classdef event % < hedManager
properties
latencyInFrame = []; % Vector containing latencies of N event markers.
label = {}; % Cell array of strings containing the label of N
% event markers.
hedTag; % Cell array of strings containing the associated
% HED tag of N event markers. HED: Hierarchical
% Event Descriptor.
end
properties(Dependent)
uniqueLabel; % Returns the set of unique labels.
end
properties (Hidden = true)
value = [];
end
methods
%%
function obj = event(eventChannel,label)
if nargin < 1, eventChannel = 0;end
if isstruct(eventChannel) || isa(eventChannel,'event')
obj.latencyInFrame = eventChannel.latencyInFrame;
if isfield(eventChannel,'hedTag')
obj.hedTag = eventChannel.hedTag;
else obj.hedTag = eventChannel.label;
end
obj.label = eventChannel.label;
if isfield(eventChannel,'value'), obj.value = eventChannel.value;end
else
obj.latencyInFrame = find(eventChannel);
N = length(obj.latencyInFrame);
if nargin < 2
obj.hedTag = mat2cell(num2str(eventChannel(obj.latencyInFrame)),ones(N,1));
else obj.hedTag = label;
end
indBoundary = isnan(eventChannel);
[~,ind] = ismember(obj.latencyInFrame,find(indBoundary));
obj.hedTag(ind) = {'boundary'};
obj.label = obj.hedTag;
end
end
function uniqueLabel = get.uniqueLabel(obj), uniqueLabel = unique(obj.label);end
function obj = addEventFromChannel(obj,eventChannel,offset,label)
if nargin < 3, offset = 0;end
eventChannel = eventChannel(:);
tmp = find(eventChannel);
N = length(tmp);
obj.latencyInFrame(end+1:end+N) = offset+tmp;
if nargin < 4,
if isempty(obj.hedTag)
obj.hedTag = cell(N,1);
for it=1:N
obj.hedTag{it} = strtrim(num2str(eventChannel(tmp(it))));
obj.label{it} = obj.hedTag{it};
end
else
for it=1:N
obj.hedTag{end+1} = strtrim(num2str(eventChannel(tmp(it))));
obj.label{end+1} = strtrim(num2str(eventChannel(tmp(it))));
end
end
else
obj.hedTag(end+1:end+N) = label;
obj.label(end+1:end+N) = label;
end
indBoundary = isnan(eventChannel);
[~,ind] = ismember(obj.latencyInFrame,offset+find(indBoundary));
obj.hedTag(logical(ind)) = {'boundary'};
obj.label(logical(ind)) = {'boundary'};
end
%%
function obj = addEvent(obj,latencyInFrame,label,varargin)
if nargin < 3, error('prog:input','Not enough input arguments.');end
N = length(latencyInFrame);
obj.latencyInFrame(end+1:end+N) = latencyInFrame;
shortLabel = label;
if iscell(label)
obj.hedTag(end+1:end+N) = label;
if event.isHedTag([label{:}])
for it=1:length(label)
loc = find(label{it} == '/');
if length(loc) >= 2, loc = loc(2);
else loc = length(label{it})+1;
end
shortLabel{it} = label{it}(1:loc-1);
end
end
obj.label(end+1:end+N) = shortLabel;
else
obj.hedTag(end+1:end+N) = {label};
if event.isHedTag(label);
loc = find(label == '/');
if length(loc) >= 2, loc = loc(2);
else loc = length(label)+1;
end
obj.label(end+1:end+N) = {label(1:loc(end)-1)};
else obj.label(end+1:end+N) = {label};
end
end
list = cell(length(obj.latencyInFrame),1);
for it=1:length(obj.latencyInFrame), list{it} = [num2str(obj.latencyInFrame(it)) obj.hedTag{it}];end
[~,loc] = unique(list);
obj.latencyInFrame = obj.latencyInFrame(loc);
obj.hedTag = obj.hedTag(loc);
obj.label = obj.label(loc);
[~,loc] = sort(obj.latencyInFrame);
obj.latencyInFrame = obj.latencyInFrame(loc);
obj.hedTag = obj.hedTag(loc);
obj.label = obj.label(loc);
if nargin > 3
name = varargin(1:2:end);
val = varargin(2:2:end);%#ok
if isempty(obj.value)
for it=1:length(name), eval(['obj.value(1).' name{it} '= val{it}(:);']);end
obj.value(1).label = shortLabel;
else
ind = ismember({obj.value.label},shortLabel);
if ~any(ind)
n = length(obj.value);
for it=1:length(name), eval(['obj.value(n+1).' name{it} '= val{it}(:);']);end
obj.value(n+1).label = shortLabel;
else
ind = find(ind);
ind = ind(1);%#ok
for it=1:length(name), eval(['obj.value(ind).' name{it} '(end+1:end+N)= val{it}(:);']);end
end
end
end
end
%%
function obj = eeglab2event(obj,EEG)
tmp = {EEG.event.latency};
obj.latencyInFrame = [tmp{:}];
label = {EEG.event.type}; %#ok
% eventType must contain strings
for it=1:length(label), if isnumeric(label{it}), label{it} = num2str(label{it});end;end%#ok
shortLabel = label;%#ok
obj.hedTag = label;%#ok
if event.isHedTag([label{:}])%#ok
for it=1:length(label)%#ok
loc = find(label{it} == '/');%#ok
if length(loc) >= 2, loc = loc(2);
else loc = length(label{it})+1;%#ok
end
shortLabel{it} = label{it}(1:loc-1);%#ok
end
end
obj.label = shortLabel;
end
%%
function EEG = event2eeglab(obj,EEG)
N = length(obj.label);
if N
if N == 1
latencies = {obj.latencyInFrame};
elseif N == 2
latencies = {obj.latencyInFrame(1),obj.latencyInFrame(2)};
else
latencies = num2cell(obj.latencyInFrame,[N 1]);
end
EEG = eeg_addnewevents(EEG, latencies, obj.label,{'hedTag'},obj.hedTag);
end
end
%%
function metadata = saveobj(obj)
metadata.latencyInFrame = obj.latencyInFrame;
metadata.label = obj.label;
metadata.value = obj.value;
metadata.hedTag = obj.hedTag;
end
%%
function numberOfOccurancesForEachEvent = getNumberOfOccurancesForEachEvent(obj)
N = length(obj.uniqueLabel);
numberOfOccurancesForEachEvent = zeros(1,N);
for it=1:N, numberOfOccurancesForEachEvent(it) = sum(ismember(obj.label,obj.uniqueLabel{it}));end
end
%%
function plotNumberOfOccurancesForEachEvent(obj)
numberOfOccurancesForEachEvent = getNumberOfOccurancesForEachEvent(obj);
figure;
barh(numberOfOccurancesForEachEvent);
set(gca,'ytick', 2:length(obj.uniqueLabel), 'ytickLabel', obj.uniqueLabel(2:end))
ylabel('Events');
xlabel('Number of occurences');
end
%%
function [eventLatencyInFrame, eventLabel] = getLatencyForEventLabel(obj, eventLabel)
if isnumeric(eventLabel), eventLabel = num2str(eventLabel);end
[~,loc] = ismember(obj.label,eventLabel);
eventLatencyInFrame = obj.latencyInFrame(logical(loc));
end
%%
function obj = renameLabels(obj,label,newLabel)
loc = find(ismember(obj.label,label));
if isempty(loc), return;end
for it=1:length(loc), obj.label{loc(it)} = newLabel;end
end
%%
function obj = deleteEvent(obj,index)
if length(nonzeros(index)) <= length(obj.latencyInFrame) && ~isempty(nonzeros(index))
obj.latencyInFrame(index) = [];
obj.label(index) = [];
obj.hedTag(index) = [];
end
end
%%
function obj = deleteAllEventsWithThisLabel(obj,label)
if iscell(label)
for it=1:length(label)
index = ismember(obj.label,label{it});
obj = obj.deleteEvent(index);
end
else
index = ismember(obj.label,label);
obj = obj.deleteEvent(index);
end
if ~isempty(obj.value)
ind = ismember({obj.value.label},label);
obj.value(ind) = [];
end
end
end
methods(Static=true)
%%
function obj = loadobj(a)
obj = event;
obj.latencyInFrame = a.latencyInFrame;
obj.label = a.label;
obj.value = a.value;
obj.hedTag = a.hedTag;
end
%%
function val = isHedTag(strLabel)
val = false;
if isempty(strLabel), return;end
%manager = hedManager;
%val = manager.isValidHedTag(strLabel);
if any(strLabel == '/'), val = true;end
end
end
methods(Hidden=true)
function obj = addEventWithLabels(obj,latencyInFrame,hedTag,label)
if nargin < 4, error('prog:input','Not enough input arguments.');end
N = length(latencyInFrame);
obj.latencyInFrame(end+1:end+N) = latencyInFrame;
if iscell(label)
obj.hedTag(end+1:end+N) = hedTag;
obj.label(end+1:end+N) = label;
else
obj.hedTag(end+1:end+N) = {hedTag};
obj.label(end+1:end+N) = {label};
end
end
function eventId = getIdForEventLabel(obj, eventLabel), eventId = find(strcmp(obj.uniqueLabel, eventLabel));end
%%
function obj = interpEvent(obj,x,xi)
yi = zeros(size(obj.latencyInFrame));
if ~isempty(obj.latencyInFrame)
for it=1:length(obj.latencyInFrame)
[~,loc] = min(sqrt((x(obj.latencyInFrame(it))-xi).^2));
yi(it) = loc;
end
obj.latencyInFrame = yi;
end
end
end
end