exclude.yml

FILES_REG:
    - /mnt/nvme/sebeda/contrast-agnostic-centerofmass-crop-all-2022-10-13/data_processed/sub-brnoUhb02/sub-brnoUhb02_T2w.nii.gz  # Bad registration
    - /mnt/nvme/sebeda/contrast-agnostic-centerofmass-crop-all-2022-10-13/data_processed/sub-brnoUhb03/sub-brnoUhb03_T2w.nii.gz  # Bad registration
    - /mnt/nvme/sebeda/contrast-agnostic-centerofmass-crop-all-2022-10-13/data_processed/sub-brnoUhb07/sub-brnoUhb07_T2w.nii.gz  # Bad registration
    - /mnt/nvme/sebeda/contrast-agnostic-centerofmass-crop-all-2022-10-13/data_processed/sub-brnoUhb08/sub-brnoUhb08_T2w.nii.gz  # Bad registration
    - /mnt/nvme/sebeda/contrast-agnostic-centerofmass-crop-all-2022-10-13/data_processed/sub-mountSinai03/sub-mountSinai03_T2w.nii.gz  # Bad registration
    - /mnt/nvme/sebeda/contrast-agnostic-centerofmass-crop-all-2022-10-13/data_processed/sub-oxfordFmrib01/sub-oxfordFmrib01_T2w.nii.gz  # Bad registration
    - sub-ucdavis01  # Missing dwi --> _run 01, 02 and 03 in spine-generic/data-multi-subject
    - sub-ucdavis02  # Missing dwi --> _run 01, 02 and 03 in spine-generic/data-multi-subject
    - sub-ucdavis03  # Missing flip-2_mt-off_MTS
    - sub-ucdavis04  # Missing dwi --> _run 01, 02 and 03 in spine-generic/data-multi-subject
    - sub-ucdavis05  # Missing flip-2_mt-off_MTS
    - sub-ucdavis06  # Missing flip-2_mt-off_MTS
    - sub-ucdavis07  # Missing flip-2_mt-off_MTS
    - sub-beijingVerio01  # Missing all 3 MTS images
    - sub-beijingVerio02  # Missing all 3 MTS images
    - sub-beijingVerio03  # Missing all 3 MTS images
    - sub-beijingVerio04  # Missing all 3 MTS images
    - sub-beijingGE01  # Missing all 3 MTS images
    - sub-beijingGE02  # Missing all 3 MTS images
    - sub-beijingGE03  # Missing all 3 MTS images
    - sub-beijingGE04  # Missing all 3 MTS images
    - sub-ubc01  # Missing flip-2_mt-off_MTS
    - sub-oxfordOhba02  # DWI motion correction failed
    - sub-oxfordFmrib04  # Bad T1w registration