-
Notifications
You must be signed in to change notification settings - Fork 1
/
REF_ALL.bib
893 lines (782 loc) · 28.2 KB
/
REF_ALL.bib
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
@article{,
author={},
title={},
journal={},
volume={},
pages={},
year={}}
@article{Brechmann2013,
author={Brechmann, EC and Schepsmeier, U},
title={{Modelling dependence with C- and D-vine copulas: The R package CDVine}},
journal={Journal of Statistical Software},
volume={52},
pages={1-27},
year={2013}}
@article{Defriez2017_ocean,
author={Defriez, EJ and Reuman, DC},
title={A global geography of synchrony for marine phytoplankton},
journal={Global Ecology and Biogeography},
volume={26},
pages={867-877},
year={2017}}
@article{Defriez2017_land,
author={Defriez, EJ and Reuman, DC},
title={A global geography of synchrony for terrestrial vegetation},
journal={Global Ecology and Biogeography},
volume={26},
pages={878-888},
year={2017}}
@book{Zale2013,
author={Zale, AV and Parrish, DL and Sutton, TM},
title={Fisheries Techniques, 3rd Edition},
year={2013},
publisher={American Fisheries Society}}
@book{Czado2019,
title={Analyzing dependent data with vine copulas: a practical guide with R},
author={Czado, C},
year={2019},
publisher={Springer}
}
@book{Joe2011,
title={Dependence modelling: vine copula handbook},
author={Joe, H and Kurowicka, D},
year={2011},
publisher={World Scientific}
}
@article{Tilman1999,
author={Tilman, D},
title={The ecological consequences of changes in biodiversity: a search for general principles},
journal={Ecology},
volume={80},
pages={1455-1474},
year={1999}}
@article{Gonzalez2009,
author={Gonzalez, A and Loreau, M},
title={The causes and consequences of compensatory dynamics in ecological communities},
journal={Annual Review of Ecology, Evolution and Systematics},
volume={40},
pages={393-414},
year={2009}}
@article{Doak1998,
author={Doak, DF and Bigger, D and Harding, EK and Marvier, MA and O'Malley, RE and Thomson, D},
title={The statistical inevitability of stability-diversity relationships in community ecology},
journal={American Naturalist},
volume={151},
pages={264-276},
year={1998}}
@article{Wang2000,
author={Wang, W and Wells, MT},
title={Model selection and semiparametric inference for bivariate failure-time data},
journal={Journal of the American Statistical Association},
volume={95},
pages={62-72},
year={2000}}
@article{Genest2006,
author={Genest, C and Quessy, J-F and R{\'e}millard, B},
title={Goodness-of-fit procedures for copula models based on the probability inteegral transformation},
journal={Scandinavian Journal of Statistics},
volume={33},
pages={337-366},
year={2011}}
@article{genest2006goodness,
title={Goodness-of-fit procedures for copula models based on the probability integral transformation},
author={Genest, Christian and Quessy, Jean-Fran{\c{c}}ois and R{\'e}millard, Bruno},
journal={Scandinavian Journal of Statistics},
volume={33},
number={2},
pages={337--366},
year={2006},
publisher={Wiley Online Library}
}
@article{Shih1995,
author={Shih, JH and Louis, TA},
title={Inferences on the association parameter in copula models for bivariate survival data},
journal={Biometrics},
volume={51},
pages={1384-1399},
year={1995}}
@article{Genest2007,
author={Genest, C and Favre, A-C},
title={Everything you always wanted to know about copula modeling but were afraid to ask},
journal={Journal of Hydrologic Engineering},
volume={12},
pages={347-368},
year={2007}}
@article{Genest1995,
author={Genest, C and Ghoudi, K and Rivest, L-P},
title={A semiparametric estimation procedure of dependence parameters in multivariate families of distributions},
journal={Biometrika},
volume={82},
pages={543-552},
year={1995}}
@book{MaiScherer2017,
title={Simulating copulas: Stochastic models, sampling algorithms, and applications, 2nd edition},
author={Mai, J-F and Scherer, M},
year={2017},
publisher={Imperial College Press},
location={London}
}
@article{Popovic2018,
title={Untangling direct species associations from mediator species effects with graphical models},
author={Popovic, Gordana and Warton, David I and Thomson, Fiona and Hui, Francis KC and Moles, Angela T},
journal={bioRxiv},
pages={470161},
year={2018},
publisher={Cold Spring Harbor Laboratory}
}
@article{Popovic2019,
title={Untangling direct species associations from indirect mediator species effects with graphical models},
author={Popovic, Gordana C and Warton, David I and Thomson, Fiona J and Hui, Francis KC and Moles, Angela T},
journal={Methods in Ecology and Evolution},
volume={10},
number={9},
pages={1571--1583},
year={2019},
publisher={Wiley Online Library}
}
@article{Valpine2014,
author={de Valpine, P and Scranton, K and Knape, J and Ram, K and Mills, NJ},
title={The importance of individual development variation in stage-structured population models},
journal={Ecology Letters},
volume={17},
pages={1026-1038},
year={2014}}
@article{Anderson2018,
author={Anderson, MJ and de Valpine, P and Punnett, A and Miller, AE},
title={A pathway for multivariate analysis of ecological communities using copulas},
journal={Ecology and Evolution},
volume={9},
pages={3276-3294},
year={2018}}
@article{Li2000,
author={Li, DX},
title={On default correlation: a copula function approach},
journal={Journal of Fixed Income},
volume={9},
pages={43-54},
year={2000}}
@article{Batten2003,
author={Batten, SD and Clark, R and Flinkman, J and Hays, G and John, E and John, AWG and Jonas, T and Lindley, JA and Stevens, DP and Walney, A},
title={CPR sampling: the technical background, materials and methods, consistency and comparability},
journal={Progress in Oceanography},
volume={58},
pages={193-215},
year={2003}}
@article{Raitsos2014,
title={From silk to satellite: half a century of ocean colour anomalies in the Northeast Atlantic},
author={Raitsos, Dionysios E and Pradhan, Yaswant and Lavender, Samantha J and Hoteit, Ibrahim and McQuatters-Gollop, Abigail and Reid, Phillip C and Richardson, Anthony J},
journal={Global change biology},
volume={20},
number={7},
pages={2117--2123},
year={2014},
publisher={Wiley Online Library}
}
@article{Winemiller1992,
author={Winemiller, KO and Rose, KA},
title={{Patterns of life-history diversification in North American fishes: Implications
for population regulation}},
journal={Canadian Journal of Fisheries and Aquatic Sciences},
volume={49},
pages={2196-2218},
year={1992}}
@article{HueyGT2019,
title={Revisiting a Key Innovation in Evolutionary Biology: Felsenstein’s “Phylogenies and the Comparative Method”},
author={Huey, Raymond B and Garland Jr, Theodore and Turelli, Michael},
journal={The American Naturalist},
volume={193},
number={6},
pages={755--772},
year={2019},
publisher={The University of Chicago Press Chicago, IL}
}
@article{Felsenstein1985,
author={Felsenstein, J},
title={Phylogenies and the comparative method},
journal={American Naturalist},
volume={125},
pages={1-15},
year={1985}}
@article{Phillips2009,
title = "Branch-length estimation bias misleads molecular dating for a vertebrate mitochondrial phylogeny",
journal = "Gene",
volume = "441",
number = "1",
pages = "132 - 140",
year = "2009",
note = "Phylogenomics and its Future: Devoted to Masami Hasegawa",
issn = "0378-1119",
doi = "https://doi.org/10.1016/j.gene.2008.08.017",
url = "http://www.sciencedirect.com/science/article/pii/S0378111908004150",
author = "Matthew J. Phillips",
keywords = "Fossil calibration, Maximum likelihood, Mitochondrion, Model misspecification, RY-coding"
}
@misc{Ives2018,
title={Mixed and phylogenetic models: a conceptual introduction to correlated data},
author={Ives, AR},
year={2018},
publisher={Leanpub}
}
@article{Harmon2018,
title={Phylogenetic comparative methods: learning from trees},
author={Harmon, LJ},
journal={Self published under a CC-BY-4.0 license},
year={2018}
}
@article{HeathM2014,
title={Bayesian inference of species divergence times},
author={Heath, TA and Moore, BR},
journal={Bayesian phylogenetics: methods, algorithms, and applications},
pages={277--318},
year={2014},
publisher={Sinauer Associates, Sunderland, MA}
}
@article{GenoudIM2018,
author = {Genoud, Michel and Isler, Karin and Martin, Robert D.},
title = {Comparative analyses of basal rate of metabolism in mammals: data selection does matter},
journal = {Biological Reviews},
volume = {93},
number = {1},
pages = {404-438},
keywords = {basal rate of metabolism, BMR, brain, encephalization, allometric scaling, phylogenetic generalized least-squares regression, mammals},
doi = {10.1111/brv.12350},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/brv.12350},
eprint = {https://onlinelibrary.wiley.com/doi/pdf/10.1111/brv.12350},
year = {2018}
}
@article{DendroPy,
author = {Sukumaran, Jeet and Holder, Mark T.},
title = "{DendroPy: a Python library for phylogenetic computing}",
journal = {Bioinformatics},
volume = {26},
number = {12},
pages = {1569-1571},
year = {2010},
month = {04},
issn = {1367-4803},
doi = {10.1093/bioinformatics/btq228},
url = {https://doi.org/10.1093/bioinformatics/btq228},
eprint = {http://oup.prod.sis.lan/bioinformatics/article-pdf/26/12/1569/809362/btq228.pdf},
}
@article{Hansen2012,
author={Hansen, J and Sato, M and Ruedy, R},
title={Perception of climate change},
year={2012},
journal={Proceedings of the National Academy of Sciences},
volume={109},
pages={E2415-E2423}}
@book{MorrisDoak2002,
title={Quantitative Conservation Biology: Theory and Practice of Population Viability Analysis},
author={Morris, WF and Doak, DF},
year={2002},
publisher={Sinauer Associates},
location={Sunderland, MA, USA}
}
@book{Caswell2000,
title={Matrix Population Models: Construction, Analysis, and Interpretation},
author={Caswell, H},
year={2000},
publisher={Sinauer Associates},
location={Sunderland, MA, USA}
}
@article{GarciaCarreras2018,
author={Gar{\'i}a-Carreras, B and Sal, S and Padfield, D and Kontopoulos, D-G and Bestion, E and Schaum, C-E and Yvon-Durocher, G and Pawar, S},
title={Role of carbon allocation efficiency in the temperature dependence of autotroph growth rates},
journal={Proceedings of the National Academy of Sciences},
volume={115},
pages={E7361-7368},
year={2018}}
@article{Oconnor2007,
author={O'Connor, MI and Bruno, JF and Gaines, SD and Halpern, BS and Lester, SE and Kinlan, BP and Weiss, JM},
title={Temperature control of larval dispersal and the implications for marine ecology, evolution, and conservation},
journal={Proceedings of the National Academy of Sciences},
volume={104},
pages={1266-1271},
year={2007}}
@article{Savage2004,
author={Savage, VM and Gillooly, JF and Brown, JH and West, GB and Charnov, EL},
title={Effects of body size and temperature on population growth},
journal={American Naturalist},
volume={163},
pages={429-441},
year={2004}}
@article{YvonDurocher2014,
author={Yvon-Durocher, G and Allen, MP and Bastviken, D and Conrad, R and Gudasz, C and St-Pierre, A and Thanh-Duc, N and del Giorgio, PA},
title={Methane fluxes show consistent temperature dependence across microbial to ecosystem scales},
journal={Nature},
volume={507},
pages={488-491},
year={2014}}
@article{Cohen2015,
author={Cohen, JE and Xu, M},
title={Random sampling of skewed distributions implies {T}aylor's power law of fluctuation scaling},
journal={Proceedings of the National Academy of Sciences},
volume={112},
pages={7749-7754},
year={2015}}
@article{onken2009,
author={Onken, A and Gr{\"u}nw{\"a}lder, S and Munk, MHJ and Obermayer, K},
title={Analyzing short-term noise dependencies of spike-counts in macaque prefrontal cortex using copulas and the flashlight transformation},
journal={Plos Computational Biology},
year={2009},
volume={11},
pages={e1000577}}
@article{bjornstadfalck2001,
title={Nonparametric spatial covariance functions: Estimation and testing},
author={Bj{\o}rnstad, ON and Falck, W},
journal={Environmental and Ecological Statistics},
year={2001},
volume={8},
pages={53-70}
}
@book{burnham2003_modelselection,
title={Model selection and multimodel inference: a practical information-theoretic approach},
author={Burnham, Kenneth P and Anderson, David R},
year={2003},
publisher={Springer Science \& Business Media}
}
@book{joe1997multivariate,
title={Multivariate models and multivariate dependence concepts},
author={Joe, Harry},
year={1997},
publisher={Chapman and Hall/CRC}
}
@book{joe2014_dependence,
title={Dependence Modeling with Copulas},
author={Joe, H.},
series={Chapman \& {H}all/CRC Monographs on Statistics \& Applied Probability},
year={2014},
publisher={Taylor \& Francis}
}
@book{nelsen2006_copula,
title={An Introduction to Copulas, Second Edition},
author={Nelsen, Roger B},
year={2006},
publisher={Springer},
}
@article{walteretal2017,
title={The geography of spatial synchrony},
author={Walter, J.A. and Sheppard, L.W. and Anderson, T.L. and Kastens, J.H. and Bj{\o}rnstad, O.N. and Liebhold, A.M. and Reuman, D.C.},
journal={Ecology Letters},
year={2017},
volume={20},
pages={801-814}
}
@article{sklar1959_theorem,
title={Fonctions de r{\'e}partition {\`a} n dimensions et leurs marges},
author={Sklar, A},
journal={Publications de l'institute de statistique de l'Universit{\'e} de Paris},
volume={8},
pages={229-231},
year={1959}}
@article{li2013,
author={Li, Y and Xie, K and Hu, B},
title={Copula-{ARMA} model for multivariate wind speed and its applications in reliability assessment of generating systems},
journal={Journal of Electrical Engineering and Technology},
volume={8},
pages={421-427},
year={2013}}
@article{xu2014,
author={Xu, Q and Chen, L and Zeng, P and Xu, X},
title={{Correlation modeling among multi-wind farms based on copula-ARMA wind speed model}},
journal={China international conference on electricity distribution},
volume={543-546},
pages={CP0455},
year={2014}}
@article{GenoudIM2017,
author = {Michel Genoud and Karin Isler and Robert D. Martin},
title = {Comparative analyses of basal rate of metabolism in mammals: data selection does matter},
journal = {Biological Reviews},
volume = {93},
number = {1},
pages = {404-438},
doi = {10.1111/brv.12350},
year = {2017},
url = {https://onlinelibrary.wiley.com/doi/abs/10.1111/brv.12350}
}
@Article{NEXUS,
Title = {{NEXUS}: An extensible file format for systematic information},
Author = {David R. Maddison and David L. Swofford and Wayne P. Maddison},
Journal = {Systematic Biology},
Year = {1997},
Pages = {590-621},
Volume = {46}
}
@Article{Felsenstein1985Comp,
Title = {Phylogenies and the comparative method},
Author = {Joseph Felsenstein},
Journal = {American Naturalist},
Year = {1985},
Pages = {1--15},
Volume = {125}
}
@Article{SukumaranH2010,
Title = {{DendroPy}: A Python library for phylogenetic computing},
Author = {Jeet Sukumaran and Mark T. Holder},
Journal = {Bioinformatics},
Year = {2010},
Number = {12},
Pages = {1569-1571},
Volume = {26}
}
@article {MahlerIRL2013,
author = {Mahler, D. Luke and Ingram, Travis and Revell, Liam J. and Losos, Jonathan B.},
title = {Exceptional Convergence on the Macroevolutionary Landscape in Island Lizard Radiations},
volume = {341},
number = {6143},
pages = {292--295},
year = {2013},
doi = {10.1126/science.1232392},
issn = {0036-8075},
URL = {http://science.sciencemag.org/content/341/6143/292},
eprint = {http://science.sciencemag.org/content/341/6143/292.full.pdf},
journal = {Science}
}
@misc{MahlerIRL2013Data,
title = {Data from: Exceptional convergence on the macroevolutionary landscape in island lizard radiations},
author = {Mahler, DL and Ingram, T and Revell, LJ and Losos, JB},
year = {2013},
journal = {Science},
URL = {https://doi.org/10.5061/dryad.9g182},
doi = {doi:10.5061/dryad.9g182},
publisher = {Dryad Digital Repository}
}
@Inbook{Wills2014,
author="Wills, Skye
and Loecke, Terrance
and Sequeira, Cleiton
and Teachman, George
and Grunwald, Sabine
and West, Larry T.",
editor="Hartemink, Alfred E.
and McSweeney, Kevin",
title="Overview of the {U.S.} {R}apid {C}arbon {A}ssessment {P}roject: Sampling Design, Initial Summary and Uncertainty Estimates",
bookTitle="Soil Carbon",
year="2014",
publisher="Springer International Publishing",
address="Cham",
pages="95--104",
isbn="978-3-319-04084-4",
doi="10.1007/978-3-319-04084-4_10",
url="https://doi.org/10.1007/978-3-319-04084-4_10"
}
@Inbook{Holland1999,
author="E A Holland and G P Robertson and J Greenberg and P Groffman and R Boone and J Gosz",
editor="G P Robertson and C S Bledsoe and D C Coleman and P Sollins",
title="Soil $CO_{2}$, $N_{2}O$, and $CH_{4}$ Exchange",
bookTitle="Standard Soil Methods for Long-Term Ecological Research",
year="1999",
publisher="Oxford University Press",
pages="185--201",
isbn="9780198028260",
url="https://books.google.com/books?id=n3FUQdCjSpEC"
}
@article{Jarecke2016,
title = "Coupled soil oxygen and greenhouse gas dynamics under variable hydrology",
journal = "Soil Biology and Biochemistry",
volume = "95",
pages = "164 - 172",
year = "2016",
issn = "0038-0717",
doi = "https://doi.org/10.1016/j.soilbio.2015.12.018",
url = "http://www.sciencedirect.com/science/article/pii/S003807171600002X",
author = "Karla M. Jarecke and Terrance D. Loecke and Amy J. Burgin",
keywords = "Soil oxygen dynamics, Soil moisture, Greenhouse gases, Biogeochemical processes, Soil gas transport"
}
@article {Tilman2001,
author = {Tilman, David and Reich, Peter B. and Knops, Johannes and Wedin, David and Mielke, Troy and Lehman, Clarence},
title = {Diversity and Productivity in a Long-Term Grassland Experiment},
volume = {294},
number = {5543},
pages = {843--845},
year = {2001},
doi = {10.1126/science.1060391},
publisher = {American Association for the Advancement of Science},
issn = {0036-8075},
URL = {http://science.sciencemag.org/content/294/5543/843},
eprint = {http://science.sciencemag.org/content/294/5543/843.full.pdf},
journal = {Science}
}
@article{Tilman2006,
title={Biodiversity and ecosystem stability in a decade-long grassland experiment},
author={Tilman, David and Reich, Peter B and Knops, Johannes MH},
journal={Nature},
volume={441},
number={7093},
pages={629},
year={2006},
doi={https://doi.org/10.1038/nature04742},
publisher={Nature Publishing Group}
}
@article{Kim2008,
author="Kim, Jong-Min
and Jung, Yoon-Sung
and Sungur, Engin A.
and Han, Kap-Hoon
and Park, Changyi
and Sohn, Insuk",
title="A copula method for modeling directional dependence of genes",
journal="BMC Bioinformatics",
year="2008",
month="May",
day="01",
volume="9",
number="1",
pages="225",
issn="1471-2105",
doi="10.1186/1471-2105-9-225",
url="https://doi.org/10.1186/1471-2105-9-225"
}
@article{Emura2016,
author = {Takeshi Emura and Yi-Hau Chen},
title ={Gene selection for survival data under dependent censoring: A copula-based approach},
journal = {Statistical Methods in Medical Research},
volume = {25},
number = {6},
pages = {2840-2857},
year = {2016},
doi = {10.1177/0962280214533378},
note ={PMID: 24821000},
URL = {https://doi.org/10.1177/0962280214533378}
}
@article{Serinaldi2008,
author = {Serinaldi, Francesco},
year = {2008},
month = {10},
pages = {671-688},
title = {Analysis of inter-gauge dependence by {K}endall's $\tau_K$, upper tail dependence coefficient, and 2-copulas with application to rainfall fields},
volume = {22},
journal = {Stochastic Environmental Research and Risk Assessment}
}
@article{Goswami2018,
title={Copula-based probabilistic characterization of precipitation extremes over {N}orth {S}ikkim {H}imalaya},
author={Goswami, Uttam P and Hazra, B and Goyal, Manish Kumar},
journal={Atmospheric Research},
volume={212},
pages={273--284},
year={2018},
publisher={Elsevier}
}
@article{She2018,
title={Copulas-based drought characteristics analysis and risk assessment across the {L}oess {P}lateau of {C}hina},
author={She, Dunxian and Xia, Jun},
journal={Water Resources Management},
volume={32},
number={2},
pages={547--564},
year={2018},
publisher={Springer}
}
@article{Macaulay1988,
title={The Rothamsted Insect Survey ‘12-metre' suction trap},
volume={78}, DOI={10.1017/S0007485300016126},
number={1}, journal={Bulletin of Entomological Research},
publisher={Cambridge University Press},
author={Macaulay, E. D. M. and Tatchell, G. M. and Taylor, L. R.},
year={1988}, pages={121–128}}
@article{Harrington2014,
title={The {R}othamsted {I}nsect {S}urvey strikes gold},
author={Harrington, R},
journal={Antenna},
volume={38},
pages={159--166},
year={2014}
}
@Article{Colebrook1979,
author="Colebrook, J. M.",
title="Continuous Plankton Records: Seasonal cycles of phytoplankton and copepods in the North Atlantic ocean and the North Sea",
journal="Marine Biology",
year="1979",
month="Mar",
day="01",
volume="51",
number="1",
pages="23--32",
issn="1432-1793",
doi="10.1007/BF00389027"
}
@article{Sheppard2016,
title={Changes in large-scale climate alter spatial synchrony of aphid pests},
author={Sheppard, Lawrence W and Bell, James R and Harrington, Richard and Reuman, Daniel C},
journal={Nature Climate Change},
volume={6},
number={6},
pages={610},
year={2016},
publisher={Nature Publishing Group}}
@article{Sheppard2017,
title={Rapid surrogate testing of wavelet coherences},
volume={5}, DOI={10.1051/epjnbp/2017000}, journal={EPJ Nonlinear Biomedical Physics},
author={Sheppard, Lawrence W. and Reid, Philip C. and Reuman, Daniel C.},
year={2017}, pages={1}}
@article{Moran1953,
title={The statistical analysis of the Canadian lynx cycle. II. Synchronization and meteorology},
volume={1}, DOI={10.1071/zo9530291}, journal={Australian Journal of Zoology},
author={Moran, P. A. P.},
year={1953}, pages={291}}
@article{Reuman2017,
author = {Reuman, Daniel C. and Zhao, Lei and Sheppard, Lawrence W. and Reid, Philip C. and Cohen, Joel E.},
title = {Synchrony affects {T}aylor's law in theory and data},
volume = {114},
number = {26},
pages = {6788--6793},
year = {2017},
doi = {10.1073/pnas.1703593114},
publisher = {National Academy of Sciences},
issn = {0027-8424},
URL = {http://www.pnas.org/content/114/26/6788},
eprint = {http://www.pnas.org/content/114/26/6788.full.pdf},
journal = {Proceedings of the National Academy of Sciences}
}
@article{Taylor1961,
title={Aggregation, variance and the mean},
author={Taylor, LR},
journal={Nature},
volume={189},
number={4766},
pages={732--735},
year={1961},
publisher={Springer}
}
@article{Doring2015,
title={Taylor’s power law and the stability of crop yields},
author={D{\"o}ring, Thomas F and Knapp, Samuel and Cohen, Joel E},
journal={Field Crops Research},
volume={183},
pages={294--302},
year={2015},
publisher={Elsevier}
}
@article{Kuo2016,
title={Life history traits and exploitation affect the spatial mean-variance relationship in fish abundance},
author={Kuo, Ting-Chun and Mandal, Sandip and Yamauchi, Atsushi and Hsieh, Chih-hao},
journal={Ecology},
year={2016},
publisher={Wiley Online Library}
}
@article{Xu2016,
title={Taylor’s power law and fixed-precision sampling: application to abundance of fish sampled by gillnets in an {A}frican lake},
author={Xu, Meng and Kolding, Jeppe and Cohen, Joel E},
journal={Canadian journal of fisheries and aquatic sciences},
volume={74},
number={1},
pages={87--100},
year={2016},
publisher={NRC Research Press}
}
@article{Taylor1988,
title={Specificity of the spatial power-law exponent in ecology and agriculture},
author={Taylor, LR and Perry, JN and Woiwod, IP and Taylor, RAJ},
journal={Nature},
volume={332},
number={6166},
pages={721},
year={1988},
publisher={Nature Publishing Group}
}
@article{Cohen2013,
title={{T}aylor's law applies to spatial variation in a human population},
author={Cohen, Joel E and Xu, Meng and Brunborg, Helge},
journal={Genus},
volume={69},
number={1},
year={2013},
publisher={JSTOR}
}
@article{Liebhold2004,
author = {Liebhold, Andrew and Koenig, Walter D. and Bjørnstad, Ottar N.},
title = {Spatial Synchrony in Population Dynamics},
journal = {Annual Review of Ecology, Evolution, and Systematics},
volume = {35},
number = {1},
pages = {467-490},
year = {2004},
doi = {10.1146/annurev.ecolsys.34.011802.132516},
URL = {https://doi.org/10.1146/annurev.ecolsys.34.011802.132516},
eprint = {https://doi.org/10.1146/annurev.ecolsys.34.011802.132516}
}
@article{Mcnab_2008,
title = "An analysis of the factors that influence the level and scaling of mammalian {BMR}",
journal = "Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology",
volume = "151",
number = "1",
pages = "5 - 28",
year = "2008",
issn = "1095-6433",
doi = "https://doi.org/10.1016/j.cbpa.2008.05.008",
url = "http://www.sciencedirect.com/science/article/pii/S1095643308007782",
author = "Brian Keith McNab",
keywords = "Body mass, Ecological factors, Energetics, Eutherian reproduction, Marsupials, Monotremes, Phylogeny"
}
@article{Mcnab_2009,
title = "Ecological factors affect the level and scaling of avian {BMR}",
journal = "Comparative Biochemistry and Physiology Part A: Molecular & Integrative Physiology",
volume = "152",
number = "1",
pages = "22 - 45",
year = "2009",
issn = "1095-6433",
doi = "https://doi.org/10.1016/j.cbpa.2008.08.021",
url = "http://www.sciencedirect.com/science/article/pii/S1095643308011185",
author = "Brian Keith McNab",
keywords = "Avian flight, Ecological factors, Energetics, Geography, Mammalian flight, Migration, Non-passerines, Passerines, Phylogeny"
}
@article{Bell2015,
title={Long-term phenological trends, species accumulation rates, aphid traits and climate: five decades of change in migrating aphids},
author={Bell, James R and Alderson, Lynda and Izera, Daniela and Kruger, Tracey and Parker, Sue and Pickup, Jon and Shortall, Chris R and Taylor, Mark S and Verrier, Paul and Harrington, Richard},
journal={Journal of Animal Ecology},
volume={84},
number={1},
pages={21--34},
year={2015},
publisher={Wiley Online Library}
}
@article{liu2016probabilistic,
title={A probabilistic assessment of the likelihood of vegetation drought under varying climate conditions across China},
author={Liu, Zhiyong and Li, Chao and Zhou, Ping and Chen, Xiuzhi},
journal={Scientific reports},
volume={6},
pages={35105},
year={2016},
publisher={Nature Publishing Group}
}
@article{smyth2019using,
title={Using high-frequency soil oxygen sensors to predict greenhouse gas emissions from wetlands},
author={Smyth, Ashley R and Loecke, Terrance D and Franz, Trenton E and Burgin, Amy J},
journal={Soil Biology and Biochemistry},
volume={128},
pages={182--192},
year={2019},
publisher={Elsevier}
}
@article{agliardi2019relationship,
title={On the relationship between GHGs and global temperature anomalies: multi-level rolling analysis and copula calibration},
author={Agliardi, Elettra and Alexopoulos, Thomas and Cech, Christian},
journal={Environmental and Resource Economics},
volume={72},
number={1},
pages={109--133},
year={2019},
publisher={Springer}
}
@misc{ccdataple120,
title = {Plant aboveground biomass data: Biodiversity {II}: Effects of {P}lant {B}iodiversity on {P}opulation and {E}cosystem {P}rocesses. {E}nvironmental {D}ata {I}nitiative. {A}vailable at: \url{ https://doi.org/10.6073/pasta/ab7b3604fb36e6875535fee68bd500a5}},
author = {Tilman, D},
year={2018},
URL = {https://doi.org/10.6073/pasta/ab7b3604fb36e6875535fee68bd500a5},
doi = {doi:10.6073/pasta/ab7b3604fb36e6875535fee68bd500a5}
}
@misc{ccdatapce120,
title = {Plant species percent cover data: Biodiversity {II}: Effects of {P}lant {B}iodiversity on {P}opulation and {E}cosystem {P}rocesses. {E}nvironmental {D}ata {I}nitiative. {A}vailable at: \url{ https://doi.org/10.6073/pasta/ae57e6e9d87dd5fd204422eeec37b442}},
author = {Tilman, D},
year={2018},
URL = {https://doi.org/10.6073/pasta/ae57e6e9d87dd5fd204422eeec37b442},
doi = {doi:10.6073/pasta/ae57e6e9d87dd5fd204422eeec37b442}
}
@misc{ccdataplotse120,
title = {Plot coordinates for the {E}120 {B}ig {B}iodiversity {F}ield: Biodiversity {II}: Effects of {P}lant {B}iodiversity on {P}opulation and {E}cosystem {P}rocesses. {E}nvironmental {D}ata {I}nitiative. {A}vailable at: \url{ https://doi.org/10.6073/pasta/940934edb437799bba2ca0a996cf072c}},
author = {Tilman, D},
year={2018},
URL = {https://doi.org/10.6073/pasta/940934edb437799bba2ca0a996cf072c},
doi = {doi:10.6073/pasta/940934edb437799bba2ca0a996cf072c}
}