diff --git a/data_processing.ipynb b/data_processing.ipynb index 30df0da..42e087e 100644 --- a/data_processing.ipynb +++ b/data_processing.ipynb @@ -191,12 +191,10 @@ "outputs": [], "source": [ "# Run segmentation on GRE scan\n", - "# ℹ️ The \"CoV reduction\" RF shimming scenario was chosen as the segmentation baseline due to the more \n", - "# homogeneous signal intensity in the I-->S direction, which results in a better segmentation peformance\n", - "# in the C7-T2 region\n", "\n", "for subject in subjects:\n", " os.chdir(os.path.join(path_data, subject, \"anat\"))\n", + " # The \"CoV\" RF shimming scenario was chosen as the segmentation baseline due to the more homogeneous signal intensity in the I-->S direction, which results in a better segmentation peformance in the C7-T2 region\n", " fname_manual_seg = os.path.join(path_labels, subject, \"anat\", f\"{subject}_acq-CoV_T2starw_label-SC_seg.nii.gz\")\n", " if os.path.exists(fname_manual_seg):\n", " # Manual segmentation already exists. Copy it to local folder\n",