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htdocs

Mar 4, 2025

e61df7a · Mar 4, 2025

Name	Name	Last commit message	Last commit date
parent directory ..
A_mellifera	A_mellifera	Add missing promoter example links + Fix TAIR links	Feb 19, 2025
C_familiaris	C_familiaris	The EPD website	Jan 31, 2025
G_gallus	G_gallus	The EPD website	Jan 31, 2025
M_mulatta	M_mulatta	The EPD website	Jan 31, 2025
P_falciparum	P_falciparum	The EPD website	Jan 31, 2025
R_norvegicus	R_norvegicus	The EPD website	Jan 31, 2025
S_cerevisiae	S_cerevisiae	Add missing promoter example links + Fix TAIR links	Feb 19, 2025
S_pombe	S_pombe	Add missing promoter example links + Fix TAIR links	Feb 19, 2025
Z_mays	Z_mays	Update Z_mays example	Feb 28, 2025
arabidopsis	arabidopsis	The EPD website	Jan 31, 2025
css_epd	css_epd	The EPD website	Jan 31, 2025
current	current	Fix /ftp/epd/views/ links	Mar 4, 2025
documents	documents	The EPD website	Jan 31, 2025
downloads	downloads	The EPD website	Jan 31, 2025
drosophila	drosophila	The EPD website	Jan 31, 2025
encode_dream	encode_dream	The EPD website	Jan 31, 2025
epdnew	epdnew	Patch for maize Ensembl links	Feb 28, 2025
ftp	ftp	The EPD website	Jan 31, 2025
human	human	The EPD website	Jan 31, 2025
human_nc	human_nc	The EPD website	Jan 31, 2025
img_epd	img_epd	The EPD website	Jan 31, 2025
js_epd	js_epd	The EPD website	Jan 31, 2025
liftOver	liftOver	The EPD website	Jan 31, 2025
maintenance_tools	maintenance_tools	The EPD website	Jan 31, 2025
mga	mga	The EPD website	Jan 31, 2025
mouse	mouse	The EPD website	Jan 31, 2025
mouse_nc	mouse_nc	The EPD website	Jan 31, 2025
mysql	mysql	The EPD website	Jan 31, 2025
promoter_elements	promoter_elements	The EPD website	Jan 31, 2025
pwmlib	pwmlib	The EPD website	Jan 31, 2025
ssa	ssa	Fix embl.ptr path	Feb 28, 2025
stats	stats	The EPD website	Jan 31, 2025
ucsc	ucsc	The EPD website	Jan 31, 2025
worm	worm	The EPD website	Jan 31, 2025
zebrafish	zebrafish	The EPD website	Jan 31, 2025
EPD_database.php	EPD_database.php	The EPD website	Jan 31, 2025
EPD_download.php	EPD_download.php	The EPD website	Jan 31, 2025
EPDnew_database.php	EPDnew_database.php	The EPD website	Jan 31, 2025
EPDnew_download.php	EPDnew_download.php	The EPD website	Jan 31, 2025
EPDnew_liftover.php	EPDnew_liftover.php	The EPD website	Jan 31, 2025
EPDnew_select.php	EPDnew_select.php	The EPD website	Jan 31, 2025
EPDnew_seqextract.php	EPDnew_seqextract.php	The EPD website	Jan 31, 2025
EPDnew_study.php	EPDnew_study.php	The EPD website	Jan 31, 2025
HOW-TO_make_EPDnew.pdf	HOW-TO_make_EPDnew.pdf	The EPD website	Jan 31, 2025
Icons	Icons	The EPD website	Jan 31, 2025
README	README	The EPD website	Jan 31, 2025
ajax-loader.gif	ajax-loader.gif	The EPD website	Jan 31, 2025
chr_NC_gi	chr_NC_gi	The EPD website	Jan 31, 2025
chr_size	chr_size	The EPD website	Jan 31, 2025
chro_idx.nstorage	chro_idx.nstorage	The EPD website	Jan 31, 2025
css_files	css_files	The EPD website	Jan 31, 2025
database_tools.php	database_tools.php	The EPD website	Jan 31, 2025
documents.php	documents.php	The EPD website	Jan 31, 2025
epdNew2genome.php	epdNew2genome.php	Patch for maize Ensembl links	Feb 28, 2025
epdNew2genome2.php	epdNew2genome2.php	Patch for maize Ensembl links	Feb 28, 2025
etc	etc	The EPD website	Jan 31, 2025
expasy.php	expasy.php	The EPD website	Jan 31, 2025
external_resources.php	external_resources.php	The EPD website	Jan 31, 2025
favicon.ico	favicon.ico	The EPD website	Jan 31, 2025
footer.html	footer.html	The EPD website	Jan 31, 2025
funders.php	funders.php	The EPD website	Jan 31, 2025
genome	genome	Update genome symlink path for a local container path to prepare moun…	Feb 13, 2025
getIdFromDatabase.php	getIdFromDatabase.php	The EPD website	Jan 31, 2025
getUcscLink.php	getUcscLink.php	Fix getUcscLink.php with Philipp's fixes	Feb 14, 2025
getUcscPicture.php	getUcscPicture.php	The EPD website	Jan 31, 2025
get_promoters.php	get_promoters.php	The EPD website	Jan 31, 2025
header.php	header.php	The EPD website	Jan 31, 2025
icons	icons	The EPD website	Jan 31, 2025
img	img	The EPD website	Jan 31, 2025
index.php	index.php	The EPD website	Jan 31, 2025
js	js	The EPD website	Jan 31, 2025
lastnews.php	lastnews.php	The EPD website	Jan 31, 2025
left_menu.php	left_menu.php	Fix local FTP links	Feb 28, 2025
left_menu_fetch_biomart.php	left_menu_fetch_biomart.php	The EPD website	Jan 31, 2025
logs	logs	The EPD website	Jan 31, 2025
master_search.php	master_search.php	The EPD website	Jan 31, 2025
menu.php	menu.php	The EPD website	Jan 31, 2025
news.php	news.php	The EPD website	Jan 31, 2025
newsTable.tsv	newsTable.tsv	The EPD website	Jan 31, 2025
othertools.html	othertools.html	The EPD website	Jan 31, 2025
privacy-notice.php	privacy-notice.php	The EPD website	Jan 31, 2025
promoter_elements.php	promoter_elements.php	The EPD website	Jan 31, 2025
references.php	references.php	The EPD website	Jan 31, 2025
resources.php	resources.php	The EPD website	Jan 31, 2025
robots.txt	robots.txt	The EPD website	Jan 31, 2025
scripts	scripts	The EPD website	Jan 31, 2025
searchDB.php	searchDB.php	The EPD website	Jan 31, 2025
searchMotifBuildMenu.php	searchMotifBuildMenu.php	The EPD website	Jan 31, 2025
search_EPD.php	search_EPD.php	The EPD website	Jan 31, 2025
search_EPDnew.php	search_EPDnew.php	The EPD website	Jan 31, 2025
send_promoters_to_ccg.php	send_promoters_to_ccg.php	The EPD website	Jan 31, 2025
sib_css	sib_css	The EPD website	Jan 31, 2025
sib_images	sib_images	The EPD website	Jan 31, 2025
stylesheets	stylesheets	The EPD website	Jan 31, 2025
tmp.pl	tmp.pl	The EPD website	Jan 31, 2025
ucsc_download_pic.php	ucsc_download_pic.php	The EPD website	Jan 31, 2025
ucsclinks.php	ucsclinks.php	The EPD website	Jan 31, 2025
upload.php	upload.php	The EPD website	Jan 31, 2025
url_extern.php	url_extern.php	The EPD website	Jan 31, 2025
url_extern.txt	url_extern.txt	The EPD website	Jan 31, 2025
user_agent.php	user_agent.php	The EPD website	Jan 31, 2025
wwwtmp	wwwtmp	The EPD website	Jan 31, 2025
wwwtmp-daily	wwwtmp-daily	The EPD website	Jan 31, 2025

README

Notes:
- session files for the selective (promoter-specific) viewers are in htdocs/epdnew/sessions/
- session files for the generic and specialized (breast ca, etc.) viewers are in htdocs/ucsc/epdHub/viewers

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