From 343af0f5f53cad6624fc22086c26893ae3ea5d12 Mon Sep 17 00:00:00 2001 From: James Date: Thu, 20 Jun 2024 09:00:20 -0400 Subject: [PATCH 01/18] add aggregation data --- sample_data/collection.json | 638 +- sample_data/sentinel-s2-l2a-cogs_0_100.json | 62436 +++++++++++++++++- 2 files changed, 62884 insertions(+), 190 deletions(-) diff --git a/sample_data/collection.json b/sample_data/collection.json index bafd3ea2..c1acbd57 100644 --- a/sample_data/collection.json +++ b/sample_data/collection.json @@ -1,195 +1,455 @@ { - "id":"sentinel-s2-l2a-cogs-test", - "stac_version":"1.0.0", - "type": "Collection", - "description":"Sentinel-2a and Sentinel-2b imagery, processed to Level 2A (Surface Reflectance) and converted to Cloud-Optimized GeoTIFFs", - "links":[ - {"rel":"self","href":"https://earth-search.aws.element84.com/v0/collections/sentinel-s2-l2a-cogs"}, - {"rel":"license","href":"https://sentinel.esa.int/documents/247904/690755/Sentinel_Data_Legal_Notice"}, - {"rel":"about","href":"https://github.com/stac-utils/stac-sentinel"}, - {"rel":"parent","href":"https://earth-search.aws.element84.com/v0/"}, - {"rel":"root","href":"https://earth-search.aws.element84.com/v0/"}, - {"rel":"items","href":"https://earth-search.aws.element84.com/v0/collections/sentinel-s2-l2a-cogs/items"} + "id": "sentinel-s2-l2a-cogs-test", + "stac_version": "1.0.0", + "description": "Sentinel-2a and Sentinel-2b imagery, processed to Level 2A (Surface Reflectance) and converted to Cloud-Optimized GeoTIFFs", + "links": [ + { + "rel": "self", + "href": "https://earth-search.aws.element84.com/v0/collections/sentinel-s2-l2a-cogs" + }, + { + "rel": "license", + "href": "https://sentinel.esa.int/documents/247904/690755/Sentinel_Data_Legal_Notice" + }, + { + "rel": "about", + "href": "https://github.com/stac-utils/stac-sentinel" + }, + { + "rel": "parent", + "href": "https://earth-search.aws.element84.com/v0/" + }, + { + "rel": "root", + "href": "https://earth-search.aws.element84.com/v0/" + }, + { + "rel": "items", + "href": "https://earth-search.aws.element84.com/v0/collections/sentinel-s2-l2a-cogs/items" + } ], - "stac_extensions":["https://stac-extensions.github.io/item-assets/v1.0.0/schema.json"], - "title":"Sentinel 2 L2A COGs", - "keywords":["sentinel","earth observation","esa"], - "providers":[ - {"name":"ESA","roles":["producer"],"url":"https://earth.esa.int/web/guest/home"}, - {"name":"Sinergise","roles":["processor"],"url":"https://registry.opendata.aws/sentinel-2/"}, - {"name":"AWS","roles":["host"],"url":"http://sentinel-pds.s3-website.eu-central-1.amazonaws.com/"}, - {"name":"Element 84","roles":["processor"],"url":"https://element84.com"} + "stac_extensions": [ + "https://stac-extensions.github.io/item-assets/v1.0.0/schema.json" ], - "summaries":{ - "platform":["sentinel-2a","sentinel-2b"], - "constellation":["sentinel-2"], - "instruments":["msi"], - "gsd":[10], - "view:off_nadir":[0] + "title": "Sentinel 2 L2A COGs", + "keywords": [ + "sentinel", + "earth observation", + "esa" + ], + "providers": [ + { + "name": "ESA", + "roles": [ + "producer" + ], + "url": "https://earth.esa.int/web/guest/home" + }, + { + "name": "Sinergise", + "roles": [ + "processor" + ], + "url": "https://registry.opendata.aws/sentinel-2/" + }, + { + "name": "AWS", + "roles": [ + "host" + ], + "url": "http://sentinel-pds.s3-website.eu-central-1.amazonaws.com/" + }, + { + "name": "Element 84", + "roles": [ + "processor" + ], + "url": "https://element84.com" + } + ], + "summaries": { + "platform": [ + "sentinel-2a", + "sentinel-2b" + ], + "constellation": [ + "sentinel-2" + ], + "instruments": [ + "msi" + ], + "gsd": [ + 10 + ], + "view:off_nadir": [ + 0 + ] }, - "item_assets":{ - "thumbnail":{ - "title":"Thumbnail", - "type":"image/png", - "roles":["thumbnail"] - }, - "overview":{ - "title":"True color image", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["overview"], - "gsd":10, - "eo:bands":[ - {"name":"B04","common_name":"red","center_wavelength":0.6645,"full_width_half_max":0.038}, - {"name":"B03","common_name":"green","center_wavelength":0.56,"full_width_half_max":0.045}, - {"name":"B02","common_name":"blue","center_wavelength":0.4966,"full_width_half_max":0.098} - ] - }, - "info":{ - "title":"Original JSON metadata", - "type":"application/json", - "roles":["metadata"] - }, - "metadata":{ - "title":"Original XML metadata", - "type":"application/xml", - "roles":["metadata"] - }, - "visual":{ - "title":"True color image", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["overview"], - "gsd":10, - "eo:bands":[ - {"name":"B04","common_name":"red","center_wavelength":0.6645,"full_width_half_max":0.038}, - {"name":"B03","common_name":"green","center_wavelength":0.56,"full_width_half_max":0.045}, - {"name":"B02","common_name":"blue","center_wavelength":0.4966,"full_width_half_max":0.098} - ] - }, - "B01":{ - "title":"Band 1 (coastal)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":60, - "eo:bands":[ - {"name":"B01","common_name":"coastal","center_wavelength":0.4439,"full_width_half_max":0.027} - ] - }, - "B02":{ - "title":"Band 2 (blue)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":10, - "eo:bands":[ - {"name":"B02","common_name":"blue","center_wavelength":0.4966,"full_width_half_max":0.098} - ] - }, - "B03":{ - "title":"Band 3 (green)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":10, - "eo:bands":[ - {"name":"B03","common_name":"green","center_wavelength":0.56,"full_width_half_max":0.045} - ] - }, - "B04":{ - "title":"Band 4 (red)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":10, - "eo:bands":[ - {"name":"B04","common_name":"red","center_wavelength":0.6645,"full_width_half_max":0.038} - ]}, - "B05":{ - "title":"Band 5", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":20, - "eo:bands":[ - {"name":"B05","center_wavelength":0.7039,"full_width_half_max":0.019} - ] - }, - "B06":{ - "title":"Band 6", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":20, - "eo:bands":[ - {"name":"B06","center_wavelength":0.7402,"full_width_half_max":0.018} - ] - }, - "B07":{ - "title":"Band 7", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":20, - "eo:bands":[ - {"name":"B07","center_wavelength":0.7825,"full_width_half_max":0.028} - ] - }, - "B08":{ - "title":"Band 8 (nir)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":10, - "eo:bands":[ - {"name":"B08","common_name":"nir","center_wavelength":0.8351,"full_width_half_max":0.145} - ] - }, - "B8A":{ - "title":"Band 8A", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":20, - "eo:bands":[ - {"name":"B8A","center_wavelength":0.8648,"full_width_half_max":0.033} - ] - }, - "B09":{ - "title":"Band 9", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":60, - "eo:bands":[ - {"name":"B09","center_wavelength":0.945,"full_width_half_max":0.026} - ] - }, - "B11":{ - "title":"Band 11 (swir16)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":20, - "eo:bands":[ - {"name":"B11","common_name":"swir16","center_wavelength":1.6137,"full_width_half_max":0.143} - ] - }, - "B12":{ - "title":"Band 12 (swir22)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"], - "gsd":20, - "eo:bands":[ - {"name":"B12","common_name":"swir22","center_wavelength":2.22024,"full_width_half_max":0.242} - ] - }, - "AOT":{ - "title":"Aerosol Optical Thickness (AOT)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"]}, - "WVP":{ - "title":"Water Vapour (WVP)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"] + "aggregations": [ + { + "name": "total_count", + "data_type": "integer" + }, + { + "name": "datetime_max", + "data_type": "datetime" + }, + { + "name": "datetime_min", + "data_type": "datetime" + }, + { + "name": "datetime_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "datetime" + }, + { + "name": "sun_elevation_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "sun_azimuth_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "geometry_geohash_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "grid_code_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geohex_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geohash_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geotile_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "geometry_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + } + ], + "item_assets": { + "thumbnail": { + "title": "Thumbnail", + "type": "image/png", + "roles": [ + "thumbnail" + ] + }, + "overview": { + "title": "True color image", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "overview" + ], + "gsd": 10, + "eo:bands": [ + { + "name": "B04", + "common_name": "red", + "center_wavelength": 0.6645, + "full_width_half_max": 0.038 + }, + { + "name": "B03", + "common_name": "green", + "center_wavelength": 0.56, + "full_width_half_max": 0.045 + }, + { + "name": "B02", + "common_name": "blue", + "center_wavelength": 0.4966, + "full_width_half_max": 0.098 + } + ] + }, + "info": { + "title": "Original JSON metadata", + "type": "application/json", + "roles": [ + "metadata" + ] + }, + "metadata": { + "title": "Original XML metadata", + "type": "application/xml", + "roles": [ + "metadata" + ] + }, + "visual": { + "title": "True color image", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "overview" + ], + "gsd": 10, + "eo:bands": [ + { + "name": "B04", + "common_name": "red", + "center_wavelength": 0.6645, + "full_width_half_max": 0.038 + }, + { + "name": "B03", + "common_name": "green", + "center_wavelength": 0.56, + "full_width_half_max": 0.045 }, - "SCL":{ - "title":"Scene Classification Map (SCL)", - "type":"image/tiff; application=geotiff; profile=cloud-optimized", - "roles":["data"] + { + "name": "B02", + "common_name": "blue", + "center_wavelength": 0.4966, + "full_width_half_max": 0.098 + } + ] + }, + "B01": { + "title": "Band 1 (coastal)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 60, + "eo:bands": [ + { + "name": "B01", + "common_name": "coastal", + "center_wavelength": 0.4439, + "full_width_half_max": 0.027 + } + ] + }, + "B02": { + "title": "Band 2 (blue)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 10, + "eo:bands": [ + { + "name": "B02", + "common_name": "blue", + "center_wavelength": 0.4966, + "full_width_half_max": 0.098 + } + ] + }, + "B03": { + "title": "Band 3 (green)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 10, + "eo:bands": [ + { + "name": "B03", + "common_name": "green", + "center_wavelength": 0.56, + "full_width_half_max": 0.045 + } + ] + }, + "B04": { + "title": "Band 4 (red)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 10, + "eo:bands": [ + { + "name": "B04", + "common_name": "red", + "center_wavelength": 0.6645, + "full_width_half_max": 0.038 + } + ] + }, + "B05": { + "title": "Band 5", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 20, + "eo:bands": [ + { + "name": "B05", + "center_wavelength": 0.7039, + "full_width_half_max": 0.019 + } + ] + }, + "B06": { + "title": "Band 6", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 20, + "eo:bands": [ + { + "name": "B06", + "center_wavelength": 0.7402, + "full_width_half_max": 0.018 + } + ] + }, + "B07": { + "title": "Band 7", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 20, + "eo:bands": [ + { + "name": "B07", + "center_wavelength": 0.7825, + "full_width_half_max": 0.028 } - }, - "extent":{ - "spatial":{"bbox":[[-180,-90,180,90]]}, - "temporal":{"interval":[["2015-06-27T10:25:31.456000Z",null]]} - }, - "license":"proprietary" - } \ No newline at end of file + ] + }, + "B08": { + "title": "Band 8 (nir)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 10, + "eo:bands": [ + { + "name": "B08", + "common_name": "nir", + "center_wavelength": 0.8351, + "full_width_half_max": 0.145 + } + ] + }, + "B8A": { + "title": "Band 8A", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 20, + "eo:bands": [ + { + "name": "B8A", + "center_wavelength": 0.8648, + "full_width_half_max": 0.033 + } + ] + }, + "B09": { + "title": "Band 9", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 60, + "eo:bands": [ + { + "name": "B09", + "center_wavelength": 0.945, + "full_width_half_max": 0.026 + } + ] + }, + "B11": { + "title": "Band 11 (swir16)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 20, + "eo:bands": [ + { + "name": "B11", + "common_name": "swir16", + "center_wavelength": 1.6137, + "full_width_half_max": 0.143 + } + ] + }, + "B12": { + "title": "Band 12 (swir22)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ], + "gsd": 20, + "eo:bands": [ + { + "name": "B12", + "common_name": "swir22", + "center_wavelength": 2.22024, + "full_width_half_max": 0.242 + } + ] + }, + "AOT": { + "title": "Aerosol Optical Thickness (AOT)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ] + }, + "WVP": { + "title": "Water Vapour (WVP)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ] + }, + "SCL": { + "title": "Scene Classification Map (SCL)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "roles": [ + "data" + ] + } + }, + "extent": { + "spatial": { + "bbox": [ + [ + -180, + -90, + 180, + 90 + ] + ] + }, + "temporal": { + "interval": [ + [ + "2015-06-27T10:25:31.456000Z", + null + ] + ] + } + }, + "license": "proprietary" +} \ No newline at end of file diff --git a/sample_data/sentinel-s2-l2a-cogs_0_100.json b/sample_data/sentinel-s2-l2a-cogs_0_100.json index c2daa992..dbc41dc5 100644 --- a/sample_data/sentinel-s2-l2a-cogs_0_100.json +++ b/sample_data/sentinel-s2-l2a-cogs_0_100.json @@ -1 +1,62435 @@ -{"type": "FeatureCollection", "features": [{"type": "Feature", "stac_version": "1.0.0", "stac_extensions": ["https://stac-extensions.github.io/eo/v1.0.0/schema.json", "https://stac-extensions.github.io/projection/v1.0.0/schema.json", "https://stac-extensions.github.io/view/v1.0.0/schema.json"], "id": "S2B_1CCV_20181004_0_L2A", "bbox": [176.86465735875524, -72.9927453068842, 178.4336680925981, -72.0124876694908], "geometry": {"type": "Polygon", "coordinates": [[[176.90734876525534, -72.9927453068842], [176.86465735875524, -72.99146546737437], [177.18936642547558, -72.0124876694908], [178.4336680925981, -72.04567023611742], [177.63304373965198, -72.55414509715332], [176.90734876525534, -72.9927453068842]]]}, "properties": {"datetime": "2018-10-04T21:05:21Z", "platform": "sentinel-2b", "constellation": "sentinel-2", "instruments": ["msi"], "gsd": 10, "data_coverage": 20.18, "view:off_nadir": 0, "eo:cloud_cover": 17.19, "proj:epsg": 32701, "sentinel:latitude_band": "C", "sentinel:grid_square": "CV", "sentinel:sequence": "0", "sentinel:product_id": "S2B_MSIL2A_20181004T210519_N0001_R071_T01CCV_20200307T115707", "created": "2020-08-30T10:49:43.719Z", "updated": "2020-08-30T10:49:43.719Z", "sentinel:valid_cloud_cover": true, "sentinel:utm_zone": 1, "sentinel:data_coverage": 20.18}, "collection": "sentinel-s2-l2a-cogs", "assets": {"thumbnail": {"title": "Thumbnail", "type": "image/png", "href": "https://roda.sentinel-hub.com/sentinel-s2-l1c/tiles/1/C/CV/2018/10/4/0/preview.jpg", "roles": ["thumbnail"]}, "overview": {"title": "True color image", "type": "image/tiff; application=geotiff; profile=cloud-optimized", "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/CV/2018/10/S2B_1CCV_20181004_0_L2A/L2A_PVI.tif", "roles": ["overview"], "eo:bands": [{"full_width_half_max": 0.038, "center_wavelength": 0.6645, "name": "B04", "common_name": "red"}, {"full_width_half_max": 0.045, "center_wavelength": 0.56, "name": "B03", "common_name": "green"}, {"full_width_half_max": 0.098, "center_wavelength": 0.4966, "name": "B02", "common_name": "blue"}], "gsd": 10, "proj:shape": [343, 343], "proj:transform": [320.0, 0.0, 300000.0, 0.0, -320.0, 2000020.0, 0.0, 0.0, 1.0]}, "info": {"title": "Original JSON metadata", "type": "application/json", "href": 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+ 0.0, + 0.0, + 1.0 + ] + }, + "info": { + "title": "Original JSON metadata", + "type": "application/json", + "href": "https://roda.sentinel-hub.com/sentinel-s2-l2a/tiles/1/C/DH/2019/12/30/0/tileInfo.json" + }, + "metadata": { + "title": "Original XML metadata", + "type": "application/xml", + "href": "https://roda.sentinel-hub.com/sentinel-s2-l2a/tiles/1/C/DH/2019/12/30/0/metadata.xml" + }, + "visual": { + "title": "True color image", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/TCI.tif", + "proj:shape": [ + 10980, + 10980 + ], + "proj:transform": [ + 10.0, + 0.0, + 399960.0, + 0.0, + -10.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B01": { + "title": "Band 1 (coastal)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B01.tif", + "proj:shape": [ + 1830, + 1830 + ], + "proj:transform": [ + 60.0, + 0.0, + 399960.0, + 0.0, + -60.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B02": { + "title": "Band 2 (blue)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B02.tif", + "proj:shape": [ + 10980, + 10980 + ], + "proj:transform": [ + 10.0, + 0.0, + 399960.0, + 0.0, + -10.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B03": { + "title": "Band 3 (green)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B03.tif", + "proj:shape": [ + 10980, + 10980 + ], + "proj:transform": [ + 10.0, + 0.0, + 399960.0, + 0.0, + -10.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B04": { + "title": "Band 4 (red)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B04.tif", + "proj:shape": [ + 10980, + 10980 + ], + "proj:transform": [ + 10.0, + 0.0, + 399960.0, + 0.0, + -10.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B05": { + "title": "Band 5", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B05.tif", + "proj:shape": [ + 5490, + 5490 + ], + "proj:transform": [ + 20.0, + 0.0, + 399960.0, + 0.0, + -20.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B06": { + "title": "Band 6", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B06.tif", + "proj:shape": [ + 5490, + 5490 + ], + "proj:transform": [ + 20.0, + 0.0, + 399960.0, + 0.0, + -20.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B07": { + "title": "Band 7", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B07.tif", + "proj:shape": [ + 5490, + 5490 + ], + "proj:transform": [ + 20.0, + 0.0, + 399960.0, + 0.0, + -20.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B08": { + "title": "Band 8 (nir)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B08.tif", + "proj:shape": [ + 10980, + 10980 + ], + "proj:transform": [ + 10.0, + 0.0, + 399960.0, + 0.0, + -10.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B8A": { + "title": "Band 8A", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B8A.tif", + "proj:shape": [ + 5490, + 5490 + ], + "proj:transform": [ + 20.0, + 0.0, + 399960.0, + 0.0, + -20.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B09": { + "title": "Band 9", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B09.tif", + "proj:shape": [ + 1830, + 1830 + ], + "proj:transform": [ + 60.0, + 0.0, + 399960.0, + 0.0, + -60.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B11": { + "title": "Band 11 (swir16)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B11.tif", + "proj:shape": [ + 5490, + 5490 + ], + "proj:transform": [ + 20.0, + 0.0, + 399960.0, + 0.0, + -20.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "B12": { + "title": "Band 12 (swir22)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/B12.tif", + "proj:shape": [ + 5490, + 5490 + ], + "proj:transform": [ + 20.0, + 0.0, + 399960.0, + 0.0, + -20.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "AOT": { + "title": "Aerosol Optical Thickness (AOT)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/AOT.tif", + "proj:shape": [ + 1830, + 1830 + ], + "proj:transform": [ + 60.0, + 0.0, + 399960.0, + 0.0, + -60.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "WVP": { + "title": "Water Vapour (WVP)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/WVP.tif", + "proj:shape": [ + 10980, + 10980 + ], + "proj:transform": [ + 10.0, + 0.0, + 399960.0, + 0.0, + -10.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + }, + "SCL": { + "title": "Scene Classification Map (SCL)", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/SCL.tif", + "proj:shape": [ + 5490, + 5490 + ], + "proj:transform": [ + 20.0, + 0.0, + 399960.0, + 0.0, + -20.0, + 800020.0, + 0.0, + 0.0, + 1.0 + ] + } + }, + "links": [ + { + "rel": "self", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/S2B_1CDH_20191230_0_L2A.json", + "type": "application/json" + }, + { + "rel": "canonical", + "href": "https://sentinel-cogs.s3.us-west-2.amazonaws.com/sentinel-s2-l2a-cogs/1/C/DH/2019/12/S2B_1CDH_20191230_0_L2A/S2B_1CDH_20191230_0_L2A.json", + "type": "application/json" + }, + { + "rel": "parent", + "href": "https://earth-search.aws.element84.com/v0/collections/sentinel-s2-l2a" + }, + { + "rel": "collection", + "href": "https://earth-search.aws.element84.com/v0/collections/sentinel-s2-l2a" + }, + { + "rel": "root", + "href": "https://earth-search.aws.element84.com/v0/" + }, + { + "title": "Source STAC Item", + "rel": "derived_from", + "href": "https://earth-search.aws.element84.com/v0/collections/sentinel-s2-l2a/items/S2B_1CDH_20191230_0_L2A", + "type": "application/json" + } + ] + } + ] +} \ No newline at end of file From 7e3bd57e091209f6096a139f8eb6b3c9a2485ef1 Mon Sep 17 00:00:00 2001 From: James Date: Thu, 20 Jun 2024 09:06:24 -0400 Subject: [PATCH 02/18] add aggregation data --- sample_data/sentinel-s2-l2a-cogs_0_100.json | 48 ++++++++++----------- 1 file changed, 24 insertions(+), 24 deletions(-) diff --git a/sample_data/sentinel-s2-l2a-cogs_0_100.json b/sample_data/sentinel-s2-l2a-cogs_0_100.json index dbc41dc5..a2c0f1cc 100644 --- a/sample_data/sentinel-s2-l2a-cogs_0_100.json +++ b/sample_data/sentinel-s2-l2a-cogs_0_100.json @@ -47811,7 +47811,7 @@ "lat": -82.82527096570686, "lon": 176.80429627751812 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -48469,7 +48469,7 @@ "lat": -82.8253503046662, "lon": 176.80742742309053 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -49127,7 +49127,7 @@ "lat": -82.82764894746067, "lon": 176.8454156896588 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -49910,7 +49910,7 @@ "lat": -82.8228144143983, "lon": 176.7152623321263 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -50644,7 +50644,7 @@ "lat": -82.8188599250412, "lon": 177.05544780560646 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -51427,7 +51427,7 @@ "lat": -82.82378154285756, "lon": 176.74835043766245 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -52181,7 +52181,7 @@ "lat": -82.82141630755902, "lon": 177.22873786985312 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -52919,7 +52919,7 @@ "lat": -82.82344000760222, "lon": 176.72601090235108 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -53613,7 +53613,7 @@ "lat": -82.82918592732982, "lon": 177.96037277535422 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -54355,7 +54355,7 @@ "lat": -82.82279607483397, "lon": 177.3607231977976 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -55115,7 +55115,7 @@ "lat": -82.8247493224044, "lon": 176.7813375104081 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -55870,7 +55870,7 @@ "lat": -82.82608115487093, "lon": 176.82545749141403 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -56526,7 +56526,7 @@ "lat": -82.82663162846099, "lon": 176.81846985917878 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -56960,7 +56960,7 @@ "lat": -82.82747110214716, "lon": 176.84250108715213 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -57396,7 +57396,7 @@ "lat": -82.84761720189744, "lon": -179.4810595706827 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -57850,7 +57850,7 @@ "lat": -82.82723330595623, "lon": 176.84221353796943 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -58304,7 +58304,7 @@ "lat": -82.82831187014665, "lon": 176.88736844028443 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -58755,7 +58755,7 @@ "lat": -82.82902622239668, "lon": 176.92244581006517 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -59404,7 +59404,7 @@ "lat": -82.847734037778, "lon": -179.314742702704 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -59842,7 +59842,7 @@ "lat": -82.84873937957457, "lon": -178.033663988285 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -60489,7 +60489,7 @@ "lat": -82.82861722305262, "lon": 176.89866208523466 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -60940,7 +60940,7 @@ "lat": -82.84867670781385, "lon": -178.69142727334093 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -61587,7 +61587,7 @@ "lat": -82.8254060854193, "lon": 176.7787501372525 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { @@ -62040,7 +62040,7 @@ "lat": -82.82626253266349, "lon": 176.81719997530953 }, - "grid:code": "No match found" + "grid:code": "" }, "collection": "sentinel-s2-l2a-cogs", "assets": { From a56ab9955559d4acf2f4b61e7808aa8d323409e5 Mon Sep 17 00:00:00 2001 From: James Date: Thu, 20 Jun 2024 10:39:53 -0400 Subject: [PATCH 03/18] links and tests --- stac_fastapi/core/stac_fastapi/core/core.py | 24 +++++++++++- .../core/stac_fastapi/core/models/links.py | 26 +++++++++++++ .../opensearch/stac_fastapi/opensearch/app.py | 11 ++++-- stac_fastapi/tests/api/test_api.py | 8 ++++ stac_fastapi/tests/conftest.py | 9 +++-- .../tests/extensions/test_aggregation.py | 37 +++++++++++++++++++ 6 files changed, 107 insertions(+), 8 deletions(-) create mode 100644 stac_fastapi/tests/extensions/test_aggregation.py diff --git a/stac_fastapi/core/stac_fastapi/core/core.py b/stac_fastapi/core/stac_fastapi/core/core.py index 57f7c816..6cc8f7a5 100644 --- a/stac_fastapi/core/stac_fastapi/core/core.py +++ b/stac_fastapi/core/stac_fastapi/core/core.py @@ -162,6 +162,24 @@ async def landing_page(self, **kwargs) -> stac_types.LandingPage: } ) + if self.extension_is_enabled("AggregationExtension"): + landing_page["links"].extend( + [ + { + "rel": "aggregate", + "type": "application/json", + "title": "Aggregate", + "href": urljoin(base_url, "aggregate"), + }, + { + "rel": "aggregations", + "type": "application/json", + "title": "Aggregations", + "href": urljoin(base_url, "aggregations"), + }, + ] + ) + collections = await self.all_collections(request=kwargs["request"]) for collection in collections["collections"]: landing_page["links"].append( @@ -512,8 +530,10 @@ async def get_search( # Do the request try: search_request = self.post_request_model(**base_args) - except ValidationError: - raise HTTPException(status_code=400, detail="Invalid parameters provided") + except ValidationError as e: + raise HTTPException( + status_code=400, detail=f"Invalid parameters provided: {e}" + ) resp = await self.post_search(search_request=search_request, request=request) return resp diff --git a/stac_fastapi/core/stac_fastapi/core/models/links.py b/stac_fastapi/core/stac_fastapi/core/models/links.py index 7a12b1c4..f12ad98f 100644 --- a/stac_fastapi/core/stac_fastapi/core/models/links.py +++ b/stac_fastapi/core/stac_fastapi/core/models/links.py @@ -139,6 +139,32 @@ def link_queryables(self) -> Dict[str, Any]: else: return None + def link_aggregate(self) -> Dict[str, Any]: + """Create the `aggregate` link.""" + if "AggregationExtension" in self.extensions: + return dict( + rel="aggregate", + type=MimeTypes.json.value, + href=urljoin( + self.base_url, f"collections/{self.collection_id}/aggregate" + ), + ) + else: + return None + + def link_aggregations(self) -> Dict[str, Any]: + """Create the `aggregations` link.""" + if "AggregationExtension" in self.extensions: + return dict( + rel="aggregations", + type=MimeTypes.json.value, + href=urljoin( + self.base_url, f"collections/{self.collection_id}/aggregations" + ), + ) + else: + return None + @attr.s class PagingLinks(BaseLinks): diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py index fbf43934..650c2654 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py @@ -15,6 +15,7 @@ from stac_fastapi.core.extensions.fields import FieldsExtension from stac_fastapi.core.session import Session from stac_fastapi.extensions.core import ( + AggregationExtension, FilterExtension, SortExtension, TokenPaginationExtension, @@ -38,7 +39,9 @@ database_logic = DatabaseLogic() -extensions = [ +aggregation_extension = AggregationExtension() + +search_extensions = [ TransactionExtension( client=TransactionsClient( database=database_logic, session=session, settings=settings @@ -59,9 +62,11 @@ filter_extension, ] +extensions = [aggregation_extension] + search_extensions + database_logic.extensions = [type(ext).__name__ for ext in extensions] -post_request_model = create_post_request_model(extensions) +post_request_model = create_post_request_model(search_extensions) api = StacApi( title=os.getenv("STAC_FASTAPI_TITLE", "stac-fastapi-opensearch"), @@ -72,7 +77,7 @@ client=CoreClient( database=database_logic, session=session, post_request_model=post_request_model ), - search_get_request_model=create_get_request_model(extensions), + search_get_request_model=create_get_request_model(search_extensions), search_post_request_model=post_request_model, ) app = api.app diff --git a/stac_fastapi/tests/api/test_api.py b/stac_fastapi/tests/api/test_api.py index 798be3f7..64545807 100644 --- a/stac_fastapi/tests/api/test_api.py +++ b/stac_fastapi/tests/api/test_api.py @@ -29,6 +29,14 @@ "POST /collections/{collection_id}/items", "PUT /collections/{collection_id}", "PUT /collections/{collection_id}/items/{item_id}", + "GET /aggregations", + "GET /aggregate", + "POST /aggregations", + "POST /aggregate", + "GET /collections/{collection_id}/aggregations", + "GET /collections/{collection_id}/aggregate", + "POST /collections/{collection_id}/aggregations", + "POST /collections/{collection_id}/aggregate", } diff --git a/stac_fastapi/tests/conftest.py b/stac_fastapi/tests/conftest.py index 619a257c..f7c82a71 100644 --- a/stac_fastapi/tests/conftest.py +++ b/stac_fastapi/tests/conftest.py @@ -39,6 +39,7 @@ ) from stac_fastapi.extensions.core import ( + AggregationExtension, FieldsExtension, FilterExtension, SortExtension, @@ -186,7 +187,7 @@ def bulk_txn_client(): @pytest_asyncio.fixture(scope="session") async def app(): settings = AsyncSettings() - extensions = [ + search_extensions = [ TransactionExtension( client=TransactionsClient( database=database, session=None, settings=settings @@ -200,7 +201,9 @@ async def app(): FilterExtension(), ] - post_request_model = create_post_request_model(extensions) + extensions = [AggregationExtension()] + search_extensions + + post_request_model = create_post_request_model(search_extensions) return StacApi( settings=settings, @@ -211,7 +214,7 @@ async def app(): post_request_model=post_request_model, ), extensions=extensions, - search_get_request_model=create_get_request_model(extensions), + search_get_request_model=create_get_request_model(search_extensions), search_post_request_model=post_request_model, ).app diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py new file mode 100644 index 00000000..96372e8f --- /dev/null +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -0,0 +1,37 @@ +import os + +import pytest + +THIS_DIR = os.path.dirname(os.path.abspath(__file__)) + + +@pytest.mark.asyncio +async def test_aggregation_extension_landing_page_link(app_client, ctx): + """Test if the `aggregations` and `aggregate` links are included in the landing page""" + resp = await app_client.get("/") + assert resp.status_code == 200 + + resp_json = resp.json() + keys = [link["rel"] for link in resp_json["links"]] + + assert "aggregations" in keys + assert "aggregate" in keys + + +@pytest.mark.asyncio +async def test_aggregation_extension_collection_link(app_client, load_test_data): + """Test if the `aggregations` and `aggregate` links are included in the collection links""" + test_collection = load_test_data("test_collection.json") + test_collection["id"] = "test" + + resp = await app_client.post("/collections", json=test_collection) + assert resp.status_code == 201 + + resp = await app_client.get(f"/collections/{test_collection['id']}") + resp_json = resp.json() + keys = [link["rel"] for link in resp_json["links"]] + assert "aggregations" in keys + assert "aggregate" in keys + + resp = await app_client.delete(f"/collections/{test_collection['id']}") + assert resp.status_code == 204 From 5b1c0ce8f99d4206cb62019824c1c7068b42c526 Mon Sep 17 00:00:00 2001 From: James Date: Thu, 20 Jun 2024 23:16:04 -0400 Subject: [PATCH 04/18] functional and tested aggregations route --- .../core/extensions/aggregation.py | 478 +++++++++ .../opensearch/stac_fastapi/opensearch/app.py | 13 +- .../stac_fastapi/opensearch/database_logic.py | 167 +++ stac_fastapi/tests/conftest.py | 33 +- stac_fastapi/tests/data/test_collection.json | 59 ++ stac_fastapi/tests/data/test_item.json | 955 +++++++++--------- .../tests/extensions/test_aggregation.py | 72 ++ 7 files changed, 1297 insertions(+), 480 deletions(-) create mode 100644 stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py new file mode 100644 index 00000000..bd9c7f50 --- /dev/null +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -0,0 +1,478 @@ +"""Request model for the Aggregation extension.""" + +import json +import re +from typing import Dict, List, Optional, Union +from urllib.parse import unquote_plus, urljoin + +import attr +import orjson +from fastapi import HTTPException, Request +from pygeofilter.backends.cql2_json import to_cql2 +from pygeofilter.parsers.cql2_text import parse as parse_cql2_text +from stac_pydantic.shared import BBox + +from stac_fastapi.core.base_database_logic import BaseDatabaseLogic +from stac_fastapi.core.base_settings import ApiBaseSettings +from stac_fastapi.core.session import Session +from stac_fastapi.extensions.core.aggregation.client import AsyncBaseAggregationClient +from stac_fastapi.extensions.core.aggregation.request import ( + AggregationExtensionGetRequest, + AggregationExtensionPostRequest, +) +from stac_fastapi.extensions.core.aggregation.types import ( + Aggregation, + AggregationCollection, +) +from stac_fastapi.types.rfc3339 import DateTimeType + + +@attr.s +class OpenSearchAggregationExtensionGetRequest(AggregationExtensionGetRequest): + """Add implementation specific query parameters to AggregationExtensionGetRequest for aggrgeation precision.""" + + grid_geohex_frequency_precision: Optional[int] = attr.ib(default=None) + grid_geohash_frequency_precision: Optional[int] = attr.ib(default=None) + grid_geotile_frequency_precision: Optional[int] = attr.ib(default=None) + centroid_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) + centroid_geohex_grid_frequency_precision: Optional[int] = attr.ib(default=None) + centroid_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) + geometry_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) + geometry_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) + + +@attr.s +class OpenSearchAggregationExtensionPostRequest(AggregationExtensionPostRequest): + """Add implementation specific query parameters to AggregationExtensionPostRequest for aggrgeation precision.""" + + grid_geohex_frequency_precision: Optional[int] = attr.ib(default=None) + grid_geohash_frequency_precision: Optional[int] = attr.ib(default=None) + grid_geotile_frequency_precision: Optional[int] = attr.ib(default=None) + centroid_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) + centroid_geohex_grid_frequency_precision: Optional[int] = attr.ib(default=None) + centroid_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) + geometry_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) + geometry_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) + + +@attr.s +class EsAsyncAggregationClient(AsyncBaseAggregationClient): + """Defines a pattern for implementing the STAC aggregation extension.""" + + database: BaseDatabaseLogic = attr.ib() + settings: ApiBaseSettings = attr.ib() + session: Session = attr.ib(default=attr.Factory(Session.create_from_env)) + + DEFAULT_AGGREGATIONS = [ + {"name": "total_count", "data_type": "integer"}, + {"name": "datetime_max", "data_type": "datetime"}, + {"name": "datetime_min", "data_type": "datetime"}, + { + "name": "datetime_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "datetime", + }, + ] + + ALL_AGGREGATION_NAMES = [agg["name"] for agg in DEFAULT_AGGREGATIONS] + [ + "collection_frequency", + "grid_code_frequency", + "grid_geohash_frequency", + "grid_geohex_frequency", + "grid_geotile_frequency", + "centroid_geohash_grid_frequency", + "centroid_geohex_grid_frequency", + "centroid_geotile_grid_frequency", + "geometry_geohash_grid_frequency", + # 'geometry_geohex_grid_frequency', + "geometry_geotile_grid_frequency", + "platform_frequency", + "sun_elevation_frequency", + "sun_azimuth_frequency", + "off_nadir_frequency", + "cloud_cover_frequency", + ] + + MAX_GEOHASH_PRECISION = 12 + MAX_GEOHEX_PRECISION = 15 + MAX_GEOTILE_PRECISION = 29 + + async def get_aggregations(self, collection_id: Optional[str] = None, **kwargs): + """Get the available aggregations for a catalog or collection defined in the STAC JSON. If no aggregations, default aggregations are used.""" + request: Request = kwargs["request"] + base_url = str(request.base_url) + + links = [{"rel": "root", "type": "application/json", "href": base_url}] + + if collection_id is not None: + collection_endpoint = urljoin(base_url, f"collections/{collection_id}") + links.extend( + [ + { + "rel": "collection", + "type": "application/json", + "href": collection_endpoint, + }, + { + "rel": "self", + "type": "application/json", + "href": urljoin(collection_endpoint, "aggregations"), + }, + ] + ) + if self.database.check_collection_exists(collection_id): + collection = await self.database.find_collection(collection_id) + aggregations = collection.get( + "aggregations", self.DEFAULT_AGGREGATIONS.copy() + ) + else: + raise IndexError("Collection does not exist") + else: + links.append( + { + "rel": "self", + "type": "application/json", + "href": urljoin(base_url, "aggregations"), + } + ) + + aggregations = self.DEFAULT_AGGREGATIONS + return AggregationCollection( + type="AggregationCollection", aggregations=aggregations, links=links + ) + + def extract_aggregations( + self, aggregations_value: Union[str, List[str]] + ) -> List[str]: + """Parse the aggregations from a comma separated string or a list of strings.""" + if aggregations_value: + try: + if isinstance(aggregations_value, str): + if "," in aggregations_value: + aggs = aggregations_value.split(",") + else: + aggs = [aggregations_value] + else: + aggs = list(aggregations_value) + except (json.JSONDecodeError, ValueError): + raise HTTPException( + status_code=400, detail="Invalid aggregations value" + ) + + return aggs + return [] + + def extract_ids(self, ids_value: Union[str, List[str]]) -> List[str]: + """Parse item ids from a comma separated string or a list of strings.""" + if ids_value: + try: + if isinstance(ids_value, str): + if "," in ids_value: + ids_rules = ids_value.split(",") + else: + ids_rules = [ids_value] + else: + ids_rules = list(ids_value) + except (json.JSONDecodeError, ValueError): + raise HTTPException(status_code=400, detail="Invalid ids value") + + return ids_rules + else: + return [] + + # TEST NUMBER OUTSIDE OF RANGE + # TEST NONE PRECISION + def extract_precision( + self, precision: int, min_value: int, max_value: int + ) -> Optional[int]: + """Ensure that the aggregation precision value is withing the a valid range, otherwise return the minumium value.""" + if precision is not None: + if precision < min_value or precision > max_value: + raise HTTPException( + status_code=400, + detail=f"Invalid precision. Must be a number between {min_value} and {max_value} inclusive", + ) + return precision + else: + return min_value + + def _format_datetime_range(self, date_tuple: DateTimeType) -> str: + """ + Convert a tuple of datetime objects or None into a formatted string for API requests. + + Args: + date_tuple (tuple): A tuple containing two elements, each can be a datetime object or None. + + Returns: + str: A string formatted as 'YYYY-MM-DDTHH:MM:SS.sssZ/YYYY-MM-DDTHH:MM:SS.sssZ', with '..' used if any element is None. + """ + + def format_datetime(dt): + """Format a single datetime object to the ISO8601 extended format with 'Z'.""" + return dt.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3] + "Z" if dt else ".." + + start, end = date_tuple + return f"{format_datetime(start)}/{format_datetime(end)}" + + def agg(self, es_aggs, name, data_type): + """Format aggregations results Buckets.""" + buckets = [] + for bucket in es_aggs.get(name, {}).get("buckets", []): + bucket_data = { + "key": bucket.get("key_as_string") or bucket.get("key"), + "data_type": data_type, + "frequency": bucket.get("doc_count"), + "to": bucket.get("to"), + "from": bucket.get("from"), + } + buckets.append(bucket_data) + return Aggregation( + name=name, + data_type="frequency_distribution", + overflow=es_aggs.get(name, {}).get("sum_other_doc_count", 0), + buckets=buckets, + ) + + async def aggregate( + self, + collection_id: Optional[str] = None, + collections: Optional[List[str]] = None, + datetime: Optional[DateTimeType] = None, + intersects: Optional[str] = None, + filter: Optional[str] = None, + filter_lang: Optional[str] = None, + aggregations: Optional[str] = None, + ids: Optional[List[str]] = None, + bbox: Optional[BBox] = None, + grid_geohex_frequency_precision: Optional[int] = None, + grid_geohash_frequency_precision: Optional[int] = None, + grid_geotile_frequency_precision: Optional[int] = None, + centroid_geohash_grid_frequency_precision: Optional[int] = None, + centroid_geohex_grid_frequency_precision: Optional[int] = None, + centroid_geotile_grid_frequency_precision: Optional[int] = None, + geometry_geohash_grid_frequency_precision: Optional[int] = None, + geometry_geotile_grid_frequency_precision: Optional[int] = None, + **kwargs, + ) -> Union[Dict, Exception]: + """Get aggregations from the database.""" + request: Request = kwargs["request"] + base_url = str(request.base_url) + search = self.database.make_search() + + # this is borrowed from stac-fastapi-pgstac + # Kludgy fix because using factory does not allow alias for filter-lan + query_params = str(request.query_params) + if filter_lang is None: + match = re.search(r"filter-lang=([a-z0-9-]+)", query_params, re.IGNORECASE) + if match: + filter_lang = match.group(1) + + if bbox and intersects: + raise ValueError("Expected bbox OR intersects, not both") + + if intersects: + intersects_geometry = orjson.loads(unquote_plus(intersects)) + search = self.database.apply_intersects_filter( + search=search, intersects=intersects_geometry + ) + + if bbox: + if len(bbox) == 6: + bbox = [bbox[0], bbox[1], bbox[3], bbox[4]] + + search = self.database.apply_bbox_filter(search=search, bbox=bbox) + + if collection_id: + collection_endpoint = urljoin(base_url, f"collections/{collection_id}") + + if self.database.check_collection_exists(collection_id): + collection = await self.database.find_collection(collection_id) + search = self.database.apply_collections_filter( + search=search, collection_ids=[collection_id] + ) + if isinstance(collection, Exception): + return collection + + elif collections: + search = self.database.apply_collections_filter( + search=search, collection_ids=self.extract_collection_ids(collections) + ) + + if datetime: + datetime_search = self._format_datetime_range(datetime) + search = self.database.apply_datetime_filter( + search=search, datetime_search=datetime_search + ) + + if ids: + ids = self.extract_ids(ids) + search = self.database.apply_ids_filter(search=search, item_ids=ids) + + if filter: + # filter_lang = "cql2-json" + filter = orjson.loads( + unquote_plus(filter) + if filter_lang == "cql2-json" + else to_cql2(parse_cql2_text(filter)) + ) + try: + search = self.database.apply_cql2_filter(search, filter) + except Exception as e: + raise HTTPException( + status_code=400, detail=f"Error with cql2_json filter: {e}" + ) + + aggregations_requested = self.extract_aggregations(aggregations) + + # validate that aggregations are supported by collection + # if aggregations are not defined for a collection, any aggregation may be requested + if collection and collection.get("aggregations"): + supported_aggregations = [x.name for x in collection.get("aggregations")] + for agg_name in aggregations_requested: + if agg_name not in supported_aggregations: + raise HTTPException( + status_code=415, + detail=f"Aggregation {agg_name} not supported by collection {collection_id}", + ) + else: + for agg_name in aggregations_requested: + if agg_name not in self.ALL_AGGREGATION_NAMES: + raise HTTPException( + status_code=415, + detail=f"Aggregation {agg_name} not supported at catalog level", + ) + + geohash_precision = self.extract_precision( + grid_geohash_frequency_precision, 1, self.MAX_GEOHASH_PRECISION + ) + + geohex_precision = self.extract_precision( + grid_geohex_frequency_precision, 0, self.MAX_GEOHEX_PRECISION + ) + + geotile_precision = self.extract_precision( + grid_geotile_frequency_precision, 0, self.MAX_GEOTILE_PRECISION + ) + + centroid_geohash_grid_precision = self.extract_precision( + centroid_geohash_grid_frequency_precision, 1, self.MAX_GEOHASH_PRECISION + ) + + centroid_geohex_grid_precision = self.extract_precision( + centroid_geohex_grid_frequency_precision, 0, self.MAX_GEOHEX_PRECISION + ) + + centroid_geotile_grid_precision = self.extract_precision( + centroid_geotile_grid_frequency_precision, 0, self.MAX_GEOTILE_PRECISION + ) + + geometry_geohash_grid_precision = self.extract_precision( + geometry_geohash_grid_frequency_precision, 1, self.MAX_GEOHASH_PRECISION + ) + + # geometry_geohex_grid_frequency_precision = self.extract_precision( + # geometry_geohex_grid_frequency_precision, + # 0, + # max_geohex_precision + # ) + + geometry_geotile_grid_precision = self.extract_precision( + geometry_geotile_grid_frequency_precision, 0, self.MAX_GEOTILE_PRECISION + ) + + try: + db_response = await self.database.aggregate( + collection_id, + aggregations_requested, + search, + geohash_precision, + geohex_precision, + geotile_precision, + centroid_geohash_grid_precision, + centroid_geohex_grid_precision, + centroid_geotile_grid_precision, + geometry_geohash_grid_precision, + # geometry_geohex_grid_precision, + geometry_geotile_grid_precision, + ) + except Exception as error: + if not isinstance(error, IndexError): + raise error + aggs = [] + if db_response: + result_aggs = db_response.get("aggregations") + + if "total_count" in aggregations_requested: + aggs.append( + Aggregation( + name="total_count", + data_type="integer", + value=result_aggs.get("total_count", {}).get("value", None), + ) + ) + + if "datetime_max" in aggregations_requested: + aggs.append( + Aggregation( + name="datetime_max", + data_type="datetime", + value=result_aggs.get("datetime_max", {}).get( + "value_as_string", None + ), + ) + ) + + if "datetime_min" in aggregations_requested: + aggs.append( + Aggregation( + name="datetime_min", + data_type="datetime", + value=result_aggs.get("datetime_min", {}).get( + "value_as_string", None + ), + ) + ) + + other_aggregations = { + "collection_frequency": "string", + "grid_code_frequency": "string", + "grid_geohash_frequency": "string", + "grid_geohex_frequency": "string", + "grid_geotile_frequency": "string", + "centroid_geohash_grid_frequency": "string", + "centroid_geohex_grid_frequency": "string", + "centroid_geotile_grid_frequency": "string", + "geometry_geohash_grid_frequency": "string", + "geometry_geotile_grid_frequency": "string", + "platform_frequency": "string", + "sun_elevation_frequency": "string", + "sun_azimuth_frequency": "string", + "off_nadir_frequency": "string", + "datetime_frequency": "datetime", + "cloud_cover_frequency": "numeric", + } + + for agg_name, data_type in other_aggregations.items(): + if agg_name in aggregations_requested: + aggs.append(self.agg(result_aggs, agg_name, data_type)) + links = [ + { + "rel": "self", + "type": "application/json", + "href": urljoin(base_url, "aggregate"), + }, + {"rel": "root", "type": "application/json", "href": base_url}, + ] + if collection_endpoint: + links.append( + { + "rel": "collection", + "type": "application/json", + "href": collection_endpoint, + } + ) + results = AggregationCollection( + type="AggregationCollection", aggregations=aggs, links=links + ) + + return results diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py index 650c2654..059d185a 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py @@ -12,6 +12,11 @@ TransactionsClient, ) from stac_fastapi.core.extensions import QueryExtension +from stac_fastapi.core.extensions.aggregation import ( + EsAsyncAggregationClient, + OpenSearchAggregationExtensionGetRequest, + OpenSearchAggregationExtensionPostRequest, +) from stac_fastapi.core.extensions.fields import FieldsExtension from stac_fastapi.core.session import Session from stac_fastapi.extensions.core import ( @@ -39,7 +44,13 @@ database_logic = DatabaseLogic() -aggregation_extension = AggregationExtension() +aggregation_extension = AggregationExtension( + client=EsAsyncAggregationClient( + database=database_logic, session=session, settings=settings + ) +) +aggregation_extension.GET = OpenSearchAggregationExtensionGetRequest +aggregation_extension.POST = OpenSearchAggregationExtensionPostRequest search_extensions = [ TransactionExtension( diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py index 841d5e27..294d9f1e 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py @@ -665,6 +665,173 @@ async def execute_search( return items, matched, next_token + """ AGGREGATE LOGIC """ + + async def aggregate( + self, + collection_ids: Optional[List[str]], + aggregations, + search: Search, + geohash_precision, + geohex_precision, + geotile_precision, + centroid_geohash_grid_precision, + centroid_geohex_grid_precision, + centroid_geotile_grid_precision, + geometry_geohash_grid_precision, + # geometry_geohex_grid_precision, + geometry_geotile_grid_precision, + ignore_unavailable: bool = True, + ): + """Return aggregations of STAC Items.""" + ALL_AGGREGATIONS = { + "total_count": {"value_count": {"field": "id"}}, + "collection_frequency": {"terms": {"field": "collection", "size": 100}}, + "platform_frequency": { + "terms": {"field": "properties.platform", "size": 100} + }, + "cloud_cover_frequency": { + "range": { + "field": "properties.eo:cloud_cover", + "ranges": [ + {"to": 5}, + {"from": 5, "to": 15}, + {"from": 15, "to": 40}, + {"from": 40}, + ], + } + }, + "datetime_frequency": { + "date_histogram": { + "field": "properties.datetime", + "calendar_interval": "month", + } + }, + "datetime_min": {"min": {"field": "properties.datetime"}}, + "datetime_max": {"max": {"field": "properties.datetime"}}, + "grid_code_frequency": { + "terms": { + "field": "properties.grid:code", + "missing": "none", + "size": 10000, + } + }, + "sun_elevation_frequency": { + "histogram": {"field": "properties.view:sun_elevation", "interval": 5} + }, + "sun_azimuth_frequency": { + "histogram": {"field": "properties.view:sun_azimuth", "interval": 5} + }, + "off_nadir_frequency": { + "histogram": {"field": "properties.view:off_nadir", "interval": 5} + }, + } + + search_body: Dict[str, Any] = {} + query = search.query.to_dict() if search.query else None + if query: + search_body["query"] = query + + logger.debug("Aggregations: %s", aggregations) + + # include all aggregations specified + # this will ignore aggregations with the wrong names + search_body["aggregations"] = { + k: v for k, v in ALL_AGGREGATIONS.items() if k in aggregations + } + + # deprecated centroid + if "grid_geohash_frequency" in aggregations: + search_body["aggregations"]["grid_geohash_frequency"] = { + "geohash_grid": { + "field": "properties.proj:centroid", + "precision": geohash_precision, + } + } + + if "grid_geohex_frequency" in aggregations: + search_body["aggregations"]["grid_geohex_frequency"] = { + "geohex_grid": { + "field": "properties.proj:centroid", + "precision": geohex_precision, + } + } + + if "grid_geotile_frequency" in aggregations: + search_body["aggregations"]["grid_geotile_frequency"] = { + "geotile_grid": { + "field": "properties.proj:centroid", + "precision": geotile_precision, + } + } + + # centroid + if "centroid_geohash_grid_frequency" in aggregations: + search_body["aggregations"]["centroid_geohash_grid_frequency"] = { + "geohash_grid": { + "field": "properties.proj:centroid", + "precision": centroid_geohash_grid_precision, + } + } + + if "centroid_geohex_grid_frequency" in aggregations: + search_body["aggregations"]["centroid_geohex_grid_frequency"] = { + "geohex_grid": { + "field": "properties.proj:centroid", + "precision": centroid_geohex_grid_precision, + } + } + + if "centroid_geotile_grid_frequency" in aggregations: + search_body["aggregations"]["centroid_geotile_grid_frequency"] = { + "geotile_grid": { + "field": "properties.proj:centroid", + "precision": centroid_geotile_grid_precision, + } + } + + # geometry + if "geometry_geohash_grid_frequency" in aggregations: + search_body["aggregations"]["geometry_geohash_grid_frequency"] = { + "geohash_grid": { + "field": "geometry", + "precision": geometry_geohash_grid_precision, + } + } + + # if "geometry_geohex_grid_frequency" in aggregations: + # search_body["aggregations"]["geometry_geohex_grid_frequency"] = { + # "geohex_grid": { + # "field": "geometry", + # "precision": geometry_geohex_grid_precision, + # } + # } + + if "geometry_geotile_grid_frequency" in aggregations: + search_body["aggregations"]["geometry_geotile_grid_frequency"] = { + "geotile_grid": { + "field": "geometry", + "precision": geometry_geotile_grid_precision, + } + } + + index_param = indices(collection_ids) + + search_task = asyncio.create_task( + self.client.search( + index=index_param, + ignore_unavailable=ignore_unavailable, + body=search_body, + ) + ) + + try: + db_response = await search_task + except exceptions.NotFoundError: + raise NotFoundError(f"Collections '{collection_ids}' do not exist") + + return db_response + """ TRANSACTION LOGIC """ async def check_collection_exists(self, collection_id: str): diff --git a/stac_fastapi/tests/conftest.py b/stac_fastapi/tests/conftest.py index f7c82a71..ce9b4903 100644 --- a/stac_fastapi/tests/conftest.py +++ b/stac_fastapi/tests/conftest.py @@ -18,6 +18,11 @@ TransactionsClient, ) from stac_fastapi.core.extensions import QueryExtension +from stac_fastapi.core.extensions.aggregation import ( + EsAsyncAggregationClient, + OpenSearchAggregationExtensionGetRequest, + OpenSearchAggregationExtensionPostRequest, +) if os.getenv("BACKEND", "elasticsearch").lower() == "opensearch": from stac_fastapi.opensearch.config import AsyncOpensearchSettings as AsyncSettings @@ -187,6 +192,15 @@ def bulk_txn_client(): @pytest_asyncio.fixture(scope="session") async def app(): settings = AsyncSettings() + + aggregation_extension = AggregationExtension( + client=EsAsyncAggregationClient( + database=database, session=None, settings=settings + ) + ) + aggregation_extension.GET = OpenSearchAggregationExtensionGetRequest + aggregation_extension.POST = OpenSearchAggregationExtensionPostRequest + search_extensions = [ TransactionExtension( client=TransactionsClient( @@ -201,7 +215,7 @@ async def app(): FilterExtension(), ] - extensions = [AggregationExtension()] + search_extensions + extensions = [aggregation_extension] + search_extensions post_request_model = create_post_request_model(search_extensions) @@ -231,7 +245,16 @@ async def app_client(app): @pytest_asyncio.fixture(scope="session") async def app_basic_auth(): settings = AsyncSettings() - extensions = [ + + aggregation_extension = AggregationExtension( + client=EsAsyncAggregationClient( + database=database, session=None, settings=settings + ) + ) + aggregation_extension.GET = OpenSearchAggregationExtensionGetRequest + aggregation_extension.POST = OpenSearchAggregationExtensionPostRequest + + search_extensions = [ TransactionExtension( client=TransactionsClient( database=database, session=None, settings=settings @@ -245,7 +268,9 @@ async def app_basic_auth(): FilterExtension(), ] - post_request_model = create_post_request_model(extensions) + extensions = [aggregation_extension] + search_extensions + + post_request_model = create_post_request_model(search_extensions) stac_api = StacApi( settings=settings, @@ -256,7 +281,7 @@ async def app_basic_auth(): post_request_model=post_request_model, ), extensions=extensions, - search_get_request_model=create_get_request_model(extensions), + search_get_request_model=create_get_request_model(search_extensions), search_post_request_model=post_request_model, ) diff --git a/stac_fastapi/tests/data/test_collection.json b/stac_fastapi/tests/data/test_collection.json index 391b906c..05b41738 100644 --- a/stac_fastapi/tests/data/test_collection.json +++ b/stac_fastapi/tests/data/test_collection.json @@ -30,6 +30,65 @@ ] } }, + "aggregations": [ + { + "name": "total_count", + "data_type": "integer" + }, + { + "name": "datetime_max", + "data_type": "datetime" + }, + { + "name": "datetime_min", + "data_type": "datetime" + }, + { + "name": "datetime_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "datetime" + }, + { + "name": "sun_elevation_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "sun_azimuth_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "geometry_geohash_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "grid_code_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geohex_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geohash_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geotile_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "geometry_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + } + ], "links": [ { "href": "http://localhost:8081/collections/landsat-8-l1", diff --git a/stac_fastapi/tests/data/test_item.json b/stac_fastapi/tests/data/test_item.json index 2b7fdd86..f3d78da8 100644 --- a/stac_fastapi/tests/data/test_item.json +++ b/stac_fastapi/tests/data/test_item.json @@ -3,503 +3,508 @@ "id": "test-item", "stac_version": "1.0.0", "stac_extensions": [ - "https://stac-extensions.github.io/eo/v1.0.0/schema.json", - "https://stac-extensions.github.io/projection/v1.0.0/schema.json" + "https://stac-extensions.github.io/eo/v1.0.0/schema.json", + "https://stac-extensions.github.io/projection/v1.0.0/schema.json" ], "geometry": { - "coordinates": [ - [ - [ - 152.15052873427666, - -33.82243006904891 - ], - [ - 150.1000346138806, - -34.257132625788756 - ], - [ - 149.5776607193635, - -32.514709769700254 - ], - [ - 151.6262528041627, - -32.08081674221862 - ], - [ - 152.15052873427666, - -33.82243006904891 - ] - ] - ], - "type": "Polygon" + "coordinates": [ + [ + [ + 152.15052873427666, + -33.82243006904891 + ], + [ + 150.1000346138806, + -34.257132625788756 + ], + [ + 149.5776607193635, + -32.514709769700254 + ], + [ + 151.6262528041627, + -32.08081674221862 + ], + [ + 152.15052873427666, + -33.82243006904891 + ] + ] + ], + "type": "Polygon" }, "properties": { - "datetime": "2020-02-12T12:30:22Z", - "landsat:scene_id": "LC82081612020043LGN00", - "landsat:row": "161", - "gsd": 15, - "eo:bands": [ - { - "gsd": 30, - "name": "B1", - "common_name": "coastal", - "center_wavelength": 0.44, - "full_width_half_max": 0.02 - }, - { - "gsd": 30, - "name": "B2", - "common_name": "blue", - "center_wavelength": 0.48, - "full_width_half_max": 0.06 - }, - { - "gsd": 30, - "name": "B3", - "common_name": "green", - "center_wavelength": 0.56, - "full_width_half_max": 0.06 - }, - { - "gsd": 30, - "name": "B4", - "common_name": "red", - "center_wavelength": 0.65, - "full_width_half_max": 0.04 - }, - { - "gsd": 30, - "name": "B5", - "common_name": "nir", - "center_wavelength": 0.86, - "full_width_half_max": 0.03 - }, - { - "gsd": 30, - "name": "B6", - "common_name": "swir16", - "center_wavelength": 1.6, - "full_width_half_max": 0.08 - }, - { - "gsd": 30, - "name": "B7", - "common_name": "swir22", - "center_wavelength": 2.2, - "full_width_half_max": 0.2 - }, - { - "gsd": 15, - "name": "B8", - "common_name": "pan", - "center_wavelength": 0.59, - "full_width_half_max": 0.18 - }, - { - "gsd": 30, - "name": "B9", - "common_name": "cirrus", - "center_wavelength": 1.37, - "full_width_half_max": 0.02 - }, - { - "gsd": 100, - "name": "B10", - "common_name": "lwir11", - "center_wavelength": 10.9, - "full_width_half_max": 0.8 + "datetime": "2020-02-12T12:30:22Z", + "landsat:scene_id": "LC82081612020043LGN00", + "landsat:row": "161", + "gsd": 15, + "eo:bands": [ + { + "gsd": 30, + "name": "B1", + "common_name": "coastal", + "center_wavelength": 0.44, + "full_width_half_max": 0.02 + }, + { + "gsd": 30, + "name": "B2", + "common_name": "blue", + "center_wavelength": 0.48, + "full_width_half_max": 0.06 + }, + { + "gsd": 30, + "name": "B3", + "common_name": "green", + "center_wavelength": 0.56, + "full_width_half_max": 0.06 + }, + { + "gsd": 30, + "name": "B4", + "common_name": "red", + "center_wavelength": 0.65, + "full_width_half_max": 0.04 + }, + { + "gsd": 30, + "name": "B5", + "common_name": "nir", + "center_wavelength": 0.86, + "full_width_half_max": 0.03 + }, + { + "gsd": 30, + "name": "B6", + "common_name": "swir16", + "center_wavelength": 1.6, + "full_width_half_max": 0.08 + }, + { + "gsd": 30, + "name": "B7", + "common_name": "swir22", + "center_wavelength": 2.2, + "full_width_half_max": 0.2 + }, + { + "gsd": 15, + "name": "B8", + "common_name": "pan", + "center_wavelength": 0.59, + "full_width_half_max": 0.18 + }, + { + "gsd": 30, + "name": "B9", + "common_name": "cirrus", + "center_wavelength": 1.37, + "full_width_half_max": 0.02 + }, + { + "gsd": 100, + "name": "B10", + "common_name": "lwir11", + "center_wavelength": 10.9, + "full_width_half_max": 0.8 + }, + { + "gsd": 100, + "name": "B11", + "common_name": "lwir12", + "center_wavelength": 12, + "full_width_half_max": 1 + } + ], + "landsat:revision": "00", + "view:sun_azimuth": -148.83296771, + "instrument": "OLI_TIRS", + "landsat:product_id": "LC08_L1GT_208161_20200212_20200212_01_RT", + "eo:cloud_cover": 0, + "landsat:tier": "RT", + "landsat:processing_level": "L1GT", + "landsat:column": "208", + "platform": "landsat-8", + "proj:epsg": 32756, + "view:sun_elevation": -37.30791534, + "view:off_nadir": 0, + "height": 2500, + "width": 2500, + "proj:centroid": { + "lat": -33.168923093262876, + "lon": 150.86362466374058 }, - { - "gsd": 100, - "name": "B11", - "common_name": "lwir12", - "center_wavelength": 12, - 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"common_name": "nir08", - "center_wavelength": 0.86, - "full_width_half_max": 0.03 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Near Infrared Band 0.8 (B5) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B6": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B6.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Short-wave Infrared Band 1.6 (B6)", - "eo:bands": [ - { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B5.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Near Infrared Band 0.8 (B5)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B5", + "common_name": "nir08", + "center_wavelength": 0.86, + "full_width_half_max": 0.03 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Near Infrared Band 0.8 (B5) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B6": { "gsd": 30, - "name": "SR_B6", - "common_name": "swir16", - "center_wavelength": 1.6, - "full_width_half_max": 0.08 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Short-wave Infrared Band 1.6 (B6) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B7": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B7.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Short-wave Infrared Band 2.2 (B7)", - "eo:bands": [ - { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B6.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Short-wave Infrared Band 1.6 (B6)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B6", + "common_name": "swir16", + "center_wavelength": 1.6, + "full_width_half_max": 0.08 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Short-wave Infrared Band 1.6 (B6) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B7": { "gsd": 30, - "name": "SR_B7", - "common_name": "swir22", - "center_wavelength": 2.2, - "full_width_half_max": 0.2 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Short-wave Infrared Band 2.2 (B7) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_QA": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_QA.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Surface Temperature Quality Assessment Band", - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Surface Temperature Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_B10": { - "gsd": 100, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_B10.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Surface Temperature Band (B10)", - "eo:bands": [ - { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B7.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Short-wave Infrared Band 2.2 (B7)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B7", + "common_name": "swir22", + "center_wavelength": 2.2, + "full_width_half_max": 0.2 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Short-wave Infrared Band 2.2 (B7) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_QA": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_QA.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Surface Temperature Quality Assessment Band", + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Surface Temperature Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_B10": { "gsd": 100, - "name": "ST_B10", - "common_name": "lwir11", - "center_wavelength": 10.9, - "full_width_half_max": 0.8 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Surface Temperature Band (B10) Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "MTL.txt": { - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.txt", - "type": "text/plain", - "title": "Product Metadata File", - "description": "Collection 2 Level-1 Product Metadata File (MTL)" - }, - "MTL.xml": { - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.xml", - "type": "application/xml", - "title": "Product Metadata File (xml)", - "description": "Collection 2 Level-1 Product Metadata File (xml)" - }, - "ST_DRAD": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_DRAD.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Downwelled Radiance Band", - "eo:bands": [ - { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_B10.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Surface Temperature Band (B10)", + "eo:bands": [ + { + "gsd": 100, + "name": "ST_B10", + "common_name": "lwir11", + "center_wavelength": 10.9, + "full_width_half_max": 0.8 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Surface Temperature Band (B10) Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "MTL.txt": { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.txt", + "type": "text/plain", + "title": "Product Metadata File", + "description": "Collection 2 Level-1 Product Metadata File (MTL)" + }, + "MTL.xml": { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.xml", + "type": "application/xml", + "title": "Product Metadata File (xml)", + "description": "Collection 2 Level-1 Product Metadata File (xml)" + }, + "ST_DRAD": { "gsd": 30, - "name": "ST_DRAD", - "description": "downwelled radiance" - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Downwelled Radiance Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_EMIS": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMIS.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Emissivity Band", - "eo:bands": [ - { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_DRAD.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Downwelled Radiance Band", + "eo:bands": [ + { + "gsd": 30, + "name": "ST_DRAD", + "description": "downwelled radiance" + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Downwelled Radiance Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_EMIS": { "gsd": 30, - "name": "ST_EMIS", - "description": "emissivity" - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Emissivity Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_EMSD": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMSD.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Emissivity Standard Deviation Band", - "eo:bands": [ - { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMIS.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Emissivity Band", + "eo:bands": [ + { + "gsd": 30, + "name": "ST_EMIS", + "description": "emissivity" + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Emissivity Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_EMSD": { "gsd": 30, - "name": "ST_EMSD", - "description": "emissivity standard deviation" - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Emissivity Standard Deviation Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - } + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMSD.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Emissivity Standard Deviation Band", + "eo:bands": [ + { + "gsd": 30, + "name": "ST_EMSD", + "description": "emissivity standard deviation" + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Emissivity Standard Deviation Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + } }, "links": [ - { - "href": "http://localhost:8081/collections/landsat-8-l1/items/LC82081612020043", - "rel": "self", - "type": "application/geo+json" - }, - { - "href": "http://localhost:8081/collections/landsat-8-l1", - "rel": "parent", - "type": "application/json" - }, - { - "href": "http://localhost:8081/collections/landsat-8-l1", - "rel": "collection", - "type": "application/json" - }, - { - "href": "http://localhost:8081/", - "rel": "root", - "type": "application/json" - } + { + "href": "http://localhost:8081/collections/landsat-8-l1/items/LC82081612020043", + "rel": "self", + "type": "application/geo+json" + }, + { + "href": "http://localhost:8081/collections/landsat-8-l1", + "rel": "parent", + "type": "application/json" + }, + { + "href": "http://localhost:8081/collections/landsat-8-l1", + "rel": "collection", + "type": "application/json" + }, + { + "href": "http://localhost:8081/", + "rel": "root", + "type": "application/json" + } ] } \ No newline at end of file diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index 96372e8f..fc7ce3d2 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -35,3 +35,75 @@ async def test_aggregation_extension_collection_link(app_client, load_test_data) resp = await app_client.delete(f"/collections/{test_collection['id']}") assert resp.status_code == 204 + + +@pytest.mark.asyncio +async def test_get_catalog_aggregations(app_client): + # there's one item that can match, so one of these queries should match it and the other shouldn't + resp = await app_client.get("/aggregations") + + assert resp.status_code == 200 + assert len(resp.json()["aggregations"]) == 4 + + +@pytest.mark.asyncio +async def test_post_catalog_aggregations(app_client): + # there's one item that can match, so one of these queries should match it and the other shouldn't + resp = await app_client.post("/aggregations") + + assert resp.status_code == 200 + assert len(resp.json()["aggregations"]) == 4 + + +@pytest.mark.asyncio +async def test_get_collection_aggregations(app_client, load_test_data): + # there's one item that can match, so one of these queries should match it and the other shouldn't + + test_collection = load_test_data("test_collection.json") + test_collection["id"] = "test" + + resp = await app_client.post("/collections", json=test_collection) + assert resp.status_code == 201 + + resp = await app_client.get(f"/collections/{test_collection['id']}/aggregations") + assert resp.status_code == 200 + assert len(resp.json()["aggregations"]) == 12 + + resp = await app_client.delete(f"/collections/{test_collection['id']}") + assert resp.status_code == 204 + + +@pytest.mark.asyncio +async def test_post_collection_aggregations(app_client, load_test_data): + # there's one item that can match, so one of these queries should match it and the other shouldn't + + test_collection = load_test_data("test_collection.json") + test_collection["id"] = "test" + + resp = await app_client.post("/collections", json=test_collection) + assert resp.status_code == 201 + + resp = await app_client.post(f"/collections/{test_collection['id']}/aggregations") + assert resp.status_code == 200 + assert len(resp.json()["aggregations"]) == 12 + + resp = await app_client.delete(f"/collections/{test_collection['id']}") + assert resp.status_code == 204 + + +# @pytest.mark.asyncio +# async def test_aggregate_filter_extension_gte_get(app_client, ctx): +# # there's one item that can match, so one of these queries should match it and the other shouldn't +# resp = await app_client.get( +# '/aggregate?aggregations=grid_geohex_frequency,total_count&grid_geohex_frequency_precision=2&filter={"op":"<=","args":[{"property": "properties.proj:epsg"},32756]}' +# ) + +# assert resp.status_code == 200 +# assert resp.json()["aggregations"][0]["value"] == 1 + +# resp = await app_client.get( +# '/aggregate?aggregations=grid_geohex_frequency,total_count&grid_geohex_frequency_precision=2&filter={"op":">","args":[{"property": "properties.proj:epsg"},32756]}' +# ) + +# assert resp.status_code == 200 +# assert resp.json()["aggregations"][0]["value"] == 0 From bfcbbac0c96e88ade3b8dbb1940483b2bc41b9e4 Mon Sep 17 00:00:00 2001 From: James Date: Sun, 23 Jun 2024 22:48:02 -0400 Subject: [PATCH 05/18] functional with tests --- sample_data/collection.json | 1 + .../core/extensions/aggregation.py | 339 ++++++------ .../stac_fastapi/opensearch/database_logic.py | 20 +- stac_fastapi/tests/data/collection.json | 158 ++++++ stac_fastapi/tests/data/item.json | 515 ++++++++++++++++++ .../tests/extensions/test_aggregation.py | 422 +++++++++++++- 6 files changed, 1251 insertions(+), 204 deletions(-) create mode 100644 stac_fastapi/tests/data/collection.json create mode 100644 stac_fastapi/tests/data/item.json diff --git a/sample_data/collection.json b/sample_data/collection.json index c1acbd57..67f895ae 100644 --- a/sample_data/collection.json +++ b/sample_data/collection.json @@ -1,6 +1,7 @@ { "id": "sentinel-s2-l2a-cogs-test", "stac_version": "1.0.0", + "type": "Collection", "description": "Sentinel-2a and Sentinel-2b imagery, processed to Level 2A (Surface Reflectance) and converted to Cloud-Optimized GeoTIFFs", "links": [ { diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index bd9c7f50..c4ab7976 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -2,7 +2,7 @@ import json import re -from typing import Dict, List, Optional, Union +from typing import Dict, List, Literal, Optional, Union from urllib.parse import unquote_plus, urljoin import attr @@ -26,11 +26,15 @@ ) from stac_fastapi.types.rfc3339 import DateTimeType +FilterLang = Literal["cql-json", "cql2-json", "cql2-text"] + @attr.s class OpenSearchAggregationExtensionGetRequest(AggregationExtensionGetRequest): """Add implementation specific query parameters to AggregationExtensionGetRequest for aggrgeation precision.""" + filter_lang: Optional[FilterLang] = attr.ib(default="cql2-text") + grid_geohex_frequency_precision: Optional[int] = attr.ib(default=None) grid_geohash_frequency_precision: Optional[int] = attr.ib(default=None) grid_geotile_frequency_precision: Optional[int] = attr.ib(default=None) @@ -45,14 +49,14 @@ class OpenSearchAggregationExtensionGetRequest(AggregationExtensionGetRequest): class OpenSearchAggregationExtensionPostRequest(AggregationExtensionPostRequest): """Add implementation specific query parameters to AggregationExtensionPostRequest for aggrgeation precision.""" - grid_geohex_frequency_precision: Optional[int] = attr.ib(default=None) - grid_geohash_frequency_precision: Optional[int] = attr.ib(default=None) - grid_geotile_frequency_precision: Optional[int] = attr.ib(default=None) - centroid_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) - centroid_geohex_grid_frequency_precision: Optional[int] = attr.ib(default=None) - centroid_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) - geometry_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) - geometry_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) + grid_geohex_frequency_precision: Optional[int] = None + grid_geohash_frequency_precision: Optional[int] = None + grid_geotile_frequency_precision: Optional[int] = None + centroid_geohash_grid_frequency_precision: Optional[int] = None + centroid_geohex_grid_frequency_precision: Optional[int] = None + centroid_geotile_grid_frequency_precision: Optional[int] = None + geometry_geohash_grid_frequency_precision: Optional[int] = None + geometry_geotile_grid_frequency_precision: Optional[int] = None @attr.s @@ -153,7 +157,7 @@ def extract_aggregations( else: aggs = [aggregations_value] else: - aggs = list(aggregations_value) + aggs = [aggregations_value] except (json.JSONDecodeError, ValueError): raise HTTPException( status_code=400, detail="Invalid aggregations value" @@ -162,28 +166,8 @@ def extract_aggregations( return aggs return [] - def extract_ids(self, ids_value: Union[str, List[str]]) -> List[str]: - """Parse item ids from a comma separated string or a list of strings.""" - if ids_value: - try: - if isinstance(ids_value, str): - if "," in ids_value: - ids_rules = ids_value.split(",") - else: - ids_rules = [ids_value] - else: - ids_rules = list(ids_value) - except (json.JSONDecodeError, ValueError): - raise HTTPException(status_code=400, detail="Invalid ids value") - - return ids_rules - else: - return [] - - # TEST NUMBER OUTSIDE OF RANGE - # TEST NONE PRECISION def extract_precision( - self, precision: int, min_value: int, max_value: int + self, precision: Union[int, None], min_value: int, max_value: int ) -> Optional[int]: """Ensure that the aggregation precision value is withing the a valid range, otherwise return the minumium value.""" if precision is not None: @@ -196,51 +180,14 @@ def extract_precision( else: return min_value - def _format_datetime_range(self, date_tuple: DateTimeType) -> str: - """ - Convert a tuple of datetime objects or None into a formatted string for API requests. - - Args: - date_tuple (tuple): A tuple containing two elements, each can be a datetime object or None. - - Returns: - str: A string formatted as 'YYYY-MM-DDTHH:MM:SS.sssZ/YYYY-MM-DDTHH:MM:SS.sssZ', with '..' used if any element is None. - """ - - def format_datetime(dt): - """Format a single datetime object to the ISO8601 extended format with 'Z'.""" - return dt.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3] + "Z" if dt else ".." - - start, end = date_tuple - return f"{format_datetime(start)}/{format_datetime(end)}" - - def agg(self, es_aggs, name, data_type): - """Format aggregations results Buckets.""" - buckets = [] - for bucket in es_aggs.get(name, {}).get("buckets", []): - bucket_data = { - "key": bucket.get("key_as_string") or bucket.get("key"), - "data_type": data_type, - "frequency": bucket.get("doc_count"), - "to": bucket.get("to"), - "from": bucket.get("from"), - } - buckets.append(bucket_data) - return Aggregation( - name=name, - data_type="frequency_distribution", - overflow=es_aggs.get(name, {}).get("sum_other_doc_count", 0), - buckets=buckets, - ) - async def aggregate( self, - collection_id: Optional[str] = None, - collections: Optional[List[str]] = None, + search_request: Optional[OpenSearchAggregationExtensionPostRequest] = None, + collections: Optional[List[str]] = [], datetime: Optional[DateTimeType] = None, intersects: Optional[str] = None, + filter_lang: Optional[FilterLang] = None, filter: Optional[str] = None, - filter_lang: Optional[str] = None, aggregations: Optional[str] = None, ids: Optional[List[str]] = None, bbox: Optional[BBox] = None, @@ -259,130 +206,176 @@ async def aggregate( base_url = str(request.base_url) search = self.database.make_search() - # this is borrowed from stac-fastapi-pgstac - # Kludgy fix because using factory does not allow alias for filter-lan - query_params = str(request.query_params) - if filter_lang is None: - match = re.search(r"filter-lang=([a-z0-9-]+)", query_params, re.IGNORECASE) - if match: - filter_lang = match.group(1) + if search_request is None: + # this is borrowed from stac-fastapi-pgstac + # Kludgy fix because using factory does not allow alias for filter-lang + # If the value is the default, check if the request is different. + query_params = str(request.query_params) + if filter_lang == "cql2-text": + match = re.search( + r"filter-lang=([a-z0-9-]+)", query_params, re.IGNORECASE + ) + if match and match.group(1) != "cql2-text": + filter_lang = match.group(1) + + search_request = OpenSearchAggregationExtensionGetRequest( + collections=",".join(collections) if collections else None, + datetime=datetime, + intersects=intersects, + filter=filter, + filter_lang=filter_lang, + aggregations=aggregations, + ids=ids, + bbox=bbox, + grid_geohex_frequency_precision=grid_geohex_frequency_precision, + grid_geohash_frequency_precision=grid_geohash_frequency_precision, + grid_geotile_frequency_precision=grid_geotile_frequency_precision, + centroid_geohash_grid_frequency_precision=centroid_geohash_grid_frequency_precision, + centroid_geohex_grid_frequency_precision=centroid_geohex_grid_frequency_precision, + centroid_geotile_grid_frequency_precision=centroid_geotile_grid_frequency_precision, + geometry_geohash_grid_frequency_precision=geometry_geohash_grid_frequency_precision, + geometry_geotile_grid_frequency_precision=geometry_geotile_grid_frequency_precision, + ) - if bbox and intersects: - raise ValueError("Expected bbox OR intersects, not both") + if search_request.aggregations: + aggregations_requested = self.extract_aggregations( + search_request.aggregations + ) + else: + aggregations_requested = [] - if intersects: - intersects_geometry = orjson.loads(unquote_plus(intersects)) - search = self.database.apply_intersects_filter( - search=search, intersects=intersects_geometry + if search_request.ids: + search = self.database.apply_ids_filter( + search=search, item_ids=search_request.ids ) - if bbox: + if search_request.datetime: + datetime_search = self._return_date(search_request.datetime) + search = self.database.apply_datetime_filter( + search=search, datetime_search=datetime_search + ) + + if search_request.bbox: + bbox = search_request.bbox if len(bbox) == 6: bbox = [bbox[0], bbox[1], bbox[3], bbox[4]] search = self.database.apply_bbox_filter(search=search, bbox=bbox) - if collection_id: - collection_endpoint = urljoin(base_url, f"collections/{collection_id}") - - if self.database.check_collection_exists(collection_id): - collection = await self.database.find_collection(collection_id) - search = self.database.apply_collections_filter( - search=search, collection_ids=[collection_id] - ) - if isinstance(collection, Exception): - return collection - - elif collections: - search = self.database.apply_collections_filter( - search=search, collection_ids=self.extract_collection_ids(collections) - ) - - if datetime: - datetime_search = self._format_datetime_range(datetime) - search = self.database.apply_datetime_filter( - search=search, datetime_search=datetime_search + if search_request.intersects: + search = self.database.apply_intersects_filter( + search=search, intersects=search_request.intersects ) - if ids: - ids = self.extract_ids(ids) - search = self.database.apply_ids_filter(search=search, item_ids=ids) - - if filter: - # filter_lang = "cql2-json" - filter = orjson.loads( - unquote_plus(filter) - if filter_lang == "cql2-json" - else to_cql2(parse_cql2_text(filter)) + if search_request.collections: + search = self.database.apply_collections_filter( + search=search, collection_ids=search_request.collections ) + # validate that aggregations are supported for all collections + # if aggregations are not defined for a collection, any aggregation may be requested + for collection_id in search_request.collections: + if self.database.check_collection_exists(collection_id): + collection = await self.database.find_collection(collection_id) + if isinstance(collection, Exception): + return collection + + if ( + collection + and collection.get("aggregations") + and aggregations_requested + ): + supported_aggregations = [ + x["name"] for x in collection.get("aggregations") + ] + for agg_name in aggregations_requested: + if agg_name not in supported_aggregations: + raise HTTPException( + status_code=400, + detail=f"Aggregation {agg_name} not supported by collection {collection_id}", + ) + else: + for agg_name in aggregations_requested: + if agg_name not in self.ALL_AGGREGATION_NAMES: + raise HTTPException( + status_code=400, + detail=f"Aggregation {agg_name} not supported at catalog level", + ) + + if search_request.filter: + if search_request.filter_lang == "cql2-text": + search_request.filter = orjson.loads( + unquote_plus(to_cql2(parse_cql2_text(search_request.filter))) + ) + elif search_request.filter_lang == "cql2-json": + if isinstance(search_request.filter, str): + search_request.filter = orjson.loads( + unquote_plus(search_request.filter) + ) + else: + raise HTTPException( + status_code=400, + detail=f"Unknown filter-lang: {search_request.filter_lang}. Filter-lang or cql2-json and cql2-text are supported.", + ) try: - search = self.database.apply_cql2_filter(search, filter) + search = self.database.apply_cql2_filter(search, search_request.filter) except Exception as e: raise HTTPException( status_code=400, detail=f"Error with cql2_json filter: {e}" ) - aggregations_requested = self.extract_aggregations(aggregations) - - # validate that aggregations are supported by collection - # if aggregations are not defined for a collection, any aggregation may be requested - if collection and collection.get("aggregations"): - supported_aggregations = [x.name for x in collection.get("aggregations")] - for agg_name in aggregations_requested: - if agg_name not in supported_aggregations: - raise HTTPException( - status_code=415, - detail=f"Aggregation {agg_name} not supported by collection {collection_id}", - ) - else: - for agg_name in aggregations_requested: - if agg_name not in self.ALL_AGGREGATION_NAMES: - raise HTTPException( - status_code=415, - detail=f"Aggregation {agg_name} not supported at catalog level", - ) - geohash_precision = self.extract_precision( - grid_geohash_frequency_precision, 1, self.MAX_GEOHASH_PRECISION + search_request.grid_geohash_frequency_precision, + 1, + self.MAX_GEOHASH_PRECISION, ) geohex_precision = self.extract_precision( - grid_geohex_frequency_precision, 0, self.MAX_GEOHEX_PRECISION + search_request.grid_geohex_frequency_precision, 0, self.MAX_GEOHEX_PRECISION ) geotile_precision = self.extract_precision( - grid_geotile_frequency_precision, 0, self.MAX_GEOTILE_PRECISION + search_request.grid_geotile_frequency_precision, + 0, + self.MAX_GEOTILE_PRECISION, ) centroid_geohash_grid_precision = self.extract_precision( - centroid_geohash_grid_frequency_precision, 1, self.MAX_GEOHASH_PRECISION + search_request.centroid_geohash_grid_frequency_precision, + 1, + self.MAX_GEOHASH_PRECISION, ) centroid_geohex_grid_precision = self.extract_precision( - centroid_geohex_grid_frequency_precision, 0, self.MAX_GEOHEX_PRECISION + search_request.centroid_geohex_grid_frequency_precision, + 0, + self.MAX_GEOHEX_PRECISION, ) centroid_geotile_grid_precision = self.extract_precision( - centroid_geotile_grid_frequency_precision, 0, self.MAX_GEOTILE_PRECISION + search_request.centroid_geotile_grid_frequency_precision, + 0, + self.MAX_GEOTILE_PRECISION, ) geometry_geohash_grid_precision = self.extract_precision( - geometry_geohash_grid_frequency_precision, 1, self.MAX_GEOHASH_PRECISION + search_request.geometry_geohash_grid_frequency_precision, + 1, + self.MAX_GEOHASH_PRECISION, ) # geometry_geohex_grid_frequency_precision = self.extract_precision( - # geometry_geohex_grid_frequency_precision, - # 0, - # max_geohex_precision + # search_request.geometry_geohex_grid_frequency_precision, 0, self.MAX_GEOHASH_PRECISION # ) geometry_geotile_grid_precision = self.extract_precision( - geometry_geotile_grid_frequency_precision, 0, self.MAX_GEOTILE_PRECISION + search_request.geometry_geotile_grid_frequency_precision, + 0, + self.MAX_GEOTILE_PRECISION, ) try: db_response = await self.database.aggregate( - collection_id, + collections, aggregations_requested, search, geohash_precision, @@ -400,7 +393,7 @@ async def aggregate( raise error aggs = [] if db_response: - result_aggs = db_response.get("aggregations") + result_aggs = db_response.get("aggregations", {}) if "total_count" in aggregations_requested: aggs.append( @@ -433,28 +426,18 @@ async def aggregate( ) ) - other_aggregations = { - "collection_frequency": "string", - "grid_code_frequency": "string", - "grid_geohash_frequency": "string", - "grid_geohex_frequency": "string", - "grid_geotile_frequency": "string", - "centroid_geohash_grid_frequency": "string", - "centroid_geohex_grid_frequency": "string", - "centroid_geotile_grid_frequency": "string", - "geometry_geohash_grid_frequency": "string", - "geometry_geotile_grid_frequency": "string", - "platform_frequency": "string", - "sun_elevation_frequency": "string", - "sun_azimuth_frequency": "string", - "off_nadir_frequency": "string", - "datetime_frequency": "datetime", - "cloud_cover_frequency": "numeric", - } - - for agg_name, data_type in other_aggregations.items(): + for agg_name in self.ALL_AGGREGATION_NAMES: if agg_name in aggregations_requested: - aggs.append(self.agg(result_aggs, agg_name, data_type)) + aggs.append( + Aggregation( + name=agg_name, + data_type="string", + value=result_aggs.get(agg_name, {}).get( + "value_as_string", None + ), + ) + ) + links = [ { "rel": "self", @@ -463,14 +446,14 @@ async def aggregate( }, {"rel": "root", "type": "application/json", "href": base_url}, ] - if collection_endpoint: - links.append( - { - "rel": "collection", - "type": "application/json", - "href": collection_endpoint, - } - ) + # if collection_endpoint: + # links.append( + # { + # "rel": "collection", + # "type": "application/json", + # "href": collection_endpoint, + # } + # ) results = AggregationCollection( type="AggregationCollection", aggregations=aggs, links=links ) diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py index 294d9f1e..5ee6d75f 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py @@ -670,17 +670,17 @@ async def execute_search( async def aggregate( self, collection_ids: Optional[List[str]], - aggregations, + aggregations: List[str], search: Search, - geohash_precision, - geohex_precision, - geotile_precision, - centroid_geohash_grid_precision, - centroid_geohex_grid_precision, - centroid_geotile_grid_precision, - geometry_geohash_grid_precision, - # geometry_geohex_grid_precision, - geometry_geotile_grid_precision, + geohash_precision: int, + geohex_precision: int, + geotile_precision: int, + centroid_geohash_grid_precision: int, + centroid_geohex_grid_precision: int, + centroid_geotile_grid_precision: int, + geometry_geohash_grid_precision: int, + # geometry_geohex_grid_precision: int, + geometry_geotile_grid_precision: int, ignore_unavailable: bool = True, ): """Return aggregations of STAC Items.""" diff --git a/stac_fastapi/tests/data/collection.json b/stac_fastapi/tests/data/collection.json new file mode 100644 index 00000000..05b41738 --- /dev/null +++ b/stac_fastapi/tests/data/collection.json @@ -0,0 +1,158 @@ +{ + "id": "test-collection", + "stac_extensions": ["https://stac-extensions.github.io/eo/v1.0.0/schema.json"], + "type": "Collection", + "description": "Landat 8 imagery radiometrically calibrated and orthorectified using gound points and Digital Elevation Model (DEM) data to correct relief displacement.", + "stac_version": "1.0.0", + "license": "PDDL-1.0", + "summaries": { + "platform": ["landsat-8"], + "instruments": ["oli", "tirs"], + "gsd": [30] + }, + "extent": { + "spatial": { + "bbox": [ + [ + -180.0, + -90.0, + 180.0, + 90.0 + ] + ] + }, + "temporal": { + "interval": [ + [ + "2013-06-01", + null + ] + ] + } + }, + "aggregations": [ + { + "name": "total_count", + "data_type": "integer" + }, + { + "name": "datetime_max", + "data_type": "datetime" + }, + { + "name": "datetime_min", + "data_type": "datetime" + }, + { + "name": "datetime_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "datetime" + }, + { + "name": "sun_elevation_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "sun_azimuth_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "geometry_geohash_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "grid_code_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geohex_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geohash_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "grid_geotile_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "geometry_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + } + ], + "links": [ + { + "href": "http://localhost:8081/collections/landsat-8-l1", + "rel": "self", + "type": "application/json" + }, + { + "href": "http://localhost:8081/", + "rel": "parent", + "type": "application/json" + }, + { + "href": "http://localhost:8081/collections/landsat-8-l1/items", + "rel": "item", + "type": "application/geo+json" + }, + { + "href": "http://localhost:8081/", + "rel": "root", + "type": "application/json" + } + ], + "title": "Landsat 8 L1", + "keywords": [ + "landsat", + "earth observation", + "usgs" + ], + "providers": [ + { + "name": "USGS", + "roles": [ + "producer" + ], + "url": "https://landsat.usgs.gov/" + }, + { + "name": "Planet Labs", + "roles": [ + "processor" + ], + "url": "https://github.com/landsat-pds/landsat_ingestor" + }, + { + "name": "AWS", + "roles": [ + "host" + ], + "url": "https://landsatonaws.com/" + }, + { + "name": "Development Seed", + "roles": [ + "processor" + ], + "url": "https://github.com/sat-utils/sat-api" + }, + { + "name": "Earth Search by Element84", + "description": "API of Earth on AWS datasets", + "roles": [ + "host" + ], + "url": "https://element84.com" + } + ] +} \ No newline at end of file diff --git a/stac_fastapi/tests/data/item.json b/stac_fastapi/tests/data/item.json new file mode 100644 index 00000000..b797db98 --- /dev/null +++ b/stac_fastapi/tests/data/item.json @@ -0,0 +1,515 @@ +{ + "type": "FeatureCollection", + "features": [ + { + "type": "Feature", + "id": "test-item", + "stac_version": "1.0.0", + "stac_extensions": [ + "https://stac-extensions.github.io/eo/v1.0.0/schema.json", + "https://stac-extensions.github.io/projection/v1.0.0/schema.json" + ], + "geometry": { + "coordinates": [ + [ + [ + 152.15052873427666, + -33.82243006904891 + ], + [ + 150.1000346138806, + -34.257132625788756 + ], + [ + 149.5776607193635, + -32.514709769700254 + ], + [ + 151.6262528041627, + -32.08081674221862 + ], + [ + 152.15052873427666, + -33.82243006904891 + ] + ] + ], + "type": "Polygon" + }, + "properties": { + "datetime": "2020-02-12T12:30:22Z", + "landsat:scene_id": "LC82081612020043LGN00", + "landsat:row": "161", + "gsd": 15, + "eo:bands": [ + { + "gsd": 30, + "name": "B1", + "common_name": "coastal", + "center_wavelength": 0.44, + "full_width_half_max": 0.02 + }, + { + "gsd": 30, + "name": "B2", + "common_name": "blue", + "center_wavelength": 0.48, + "full_width_half_max": 0.06 + }, + { + "gsd": 30, + "name": "B3", + "common_name": "green", + "center_wavelength": 0.56, + "full_width_half_max": 0.06 + }, + { + "gsd": 30, + "name": "B4", + "common_name": "red", + "center_wavelength": 0.65, + "full_width_half_max": 0.04 + }, + { + "gsd": 30, + "name": "B5", + "common_name": "nir", + "center_wavelength": 0.86, + "full_width_half_max": 0.03 + }, + { + "gsd": 30, + "name": "B6", + "common_name": "swir16", + "center_wavelength": 1.6, + "full_width_half_max": 0.08 + }, + { + "gsd": 30, + "name": "B7", + "common_name": "swir22", + "center_wavelength": 2.2, + "full_width_half_max": 0.2 + }, + { + "gsd": 15, + "name": "B8", + "common_name": "pan", + "center_wavelength": 0.59, + "full_width_half_max": 0.18 + }, + { + "gsd": 30, + "name": "B9", + "common_name": "cirrus", + "center_wavelength": 1.37, + "full_width_half_max": 0.02 + }, + { + "gsd": 100, + "name": "B10", + "common_name": "lwir11", + "center_wavelength": 10.9, + "full_width_half_max": 0.8 + }, + { + "gsd": 100, + "name": "B11", + "common_name": "lwir12", + "center_wavelength": 12, + "full_width_half_max": 1 + } + ], + "landsat:revision": "00", + "view:sun_azimuth": -148.83296771, + "instrument": "OLI_TIRS", + "landsat:product_id": "LC08_L1GT_208161_20200212_20200212_01_RT", + "eo:cloud_cover": 0, + "landsat:tier": "RT", + "landsat:processing_level": "L1GT", + "landsat:column": "208", + "platform": "landsat-8", + "proj:epsg": 32756, + "view:sun_elevation": -37.30791534, + "view:off_nadir": 0, + "height": 2500, + "width": 2500, + "proj:centroid": { + "lat": -33.168923093262876, + "lon": 150.86362466374058 + }, + "grid:code": "MGRS-56HLJ" + }, + "bbox": [ + 149.57574, + -34.25796, + 152.15194, + -32.07915 + ], + "collection": "test-collection", + "assets": { + "ANG": { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ANG.txt", + "type": "text/plain", + "title": "Angle Coefficients File", + "description": "Collection 2 Level-1 Angle Coefficients File (ANG)" + }, + "SR_B1": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B1.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Coastal/Aerosol Band (B1)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B1", + "common_name": "coastal", + "center_wavelength": 0.44, + "full_width_half_max": 0.02 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Coastal/Aerosol Band (B1) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B2": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B2.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Blue Band (B2)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B2", + "common_name": "blue", + "center_wavelength": 0.48, + "full_width_half_max": 0.06 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Blue Band (B2) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B3": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B3.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Green Band (B3)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B3", + "common_name": "green", + "center_wavelength": 0.56, + "full_width_half_max": 0.06 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Green Band (B3) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B4": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B4.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Red Band (B4)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B4", + "common_name": "red", + "center_wavelength": 0.65, + "full_width_half_max": 0.04 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Red Band (B4) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B5": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B5.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Near Infrared Band 0.8 (B5)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B5", + "common_name": "nir08", + "center_wavelength": 0.86, + "full_width_half_max": 0.03 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Near Infrared Band 0.8 (B5) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B6": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B6.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Short-wave Infrared Band 1.6 (B6)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B6", + "common_name": "swir16", + "center_wavelength": 1.6, + "full_width_half_max": 0.08 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Short-wave Infrared Band 1.6 (B6) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "SR_B7": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B7.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Short-wave Infrared Band 2.2 (B7)", + "eo:bands": [ + { + "gsd": 30, + "name": "SR_B7", + "common_name": "swir22", + "center_wavelength": 2.2, + "full_width_half_max": 0.2 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Collection 2 Level-2 Short-wave Infrared Band 2.2 (B7) Surface Reflectance", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_QA": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_QA.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Surface Temperature Quality Assessment Band", + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Surface Temperature Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_B10": { + "gsd": 100, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_B10.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Surface Temperature Band (B10)", + "eo:bands": [ + { + "gsd": 100, + "name": "ST_B10", + "common_name": "lwir11", + "center_wavelength": 10.9, + "full_width_half_max": 0.8 + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Surface Temperature Band (B10) Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "MTL.txt": { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.txt", + "type": "text/plain", + "title": "Product Metadata File", + "description": "Collection 2 Level-1 Product Metadata File (MTL)" + }, + "MTL.xml": { + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.xml", + "type": "application/xml", + "title": "Product Metadata File (xml)", + "description": "Collection 2 Level-1 Product Metadata File (xml)" + }, + "ST_DRAD": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_DRAD.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Downwelled Radiance Band", + "eo:bands": [ + { + "gsd": 30, + "name": "ST_DRAD", + "description": "downwelled radiance" + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Downwelled Radiance Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_EMIS": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMIS.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Emissivity Band", + "eo:bands": [ + { + "gsd": 30, + "name": "ST_EMIS", + "description": "emissivity" + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Emissivity Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + }, + "ST_EMSD": { + "gsd": 30, + "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMSD.TIF", + "type": "image/tiff; application=geotiff; profile=cloud-optimized", + "title": "Emissivity Standard Deviation Band", + "eo:bands": [ + { + "gsd": 30, + "name": "ST_EMSD", + "description": "emissivity standard deviation" + } + ], + "proj:shape": [ + 7731, + 7591 + ], + "description": "Landsat Collection 2 Level-2 Emissivity Standard Deviation Band Surface Temperature Product", + "proj:transform": [ + 30, + 0, + 304185, + 0, + -30, + -843585 + ] + } + }, + "links": [ + { + "href": "http://localhost:8081/collections/landsat-8-l1/items/LC82081612020043", + "rel": "self", + "type": "application/geo+json" + }, + { + "href": "http://localhost:8081/collections/landsat-8-l1", + "rel": "parent", + "type": "application/json" + }, + { + "href": "http://localhost:8081/collections/landsat-8-l1", + "rel": "collection", + "type": "application/json" + }, + { + "href": "http://localhost:8081/", + "rel": "root", + "type": "application/json" + } + ] + } + ] +} \ No newline at end of file diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index fc7ce3d2..b5e9c13b 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -91,19 +91,409 @@ async def test_post_collection_aggregations(app_client, load_test_data): assert resp.status_code == 204 -# @pytest.mark.asyncio -# async def test_aggregate_filter_extension_gte_get(app_client, ctx): -# # there's one item that can match, so one of these queries should match it and the other shouldn't -# resp = await app_client.get( -# '/aggregate?aggregations=grid_geohex_frequency,total_count&grid_geohex_frequency_precision=2&filter={"op":"<=","args":[{"property": "properties.proj:epsg"},32756]}' -# ) - -# assert resp.status_code == 200 -# assert resp.json()["aggregations"][0]["value"] == 1 - -# resp = await app_client.get( -# '/aggregate?aggregations=grid_geohex_frequency,total_count&grid_geohex_frequency_precision=2&filter={"op":">","args":[{"property": "properties.proj:epsg"},32756]}' -# ) - -# assert resp.status_code == 200 -# assert resp.json()["aggregations"][0]["value"] == 0 +@pytest.mark.asyncio +async def test_aggrgegate_filter_extension_eq_get(app_client, ctx): + resp = await app_client.get( + '/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"=","args":[{"property":"id"},"test-item"]}' + ) + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_eq_post(app_client, ctx): + params = { + "filter": {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + resp = await app_client.post("/aggregate", json=params) + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_extension_gte_get(app_client, ctx): + # there's one item that can match, so one of these queries should match it and the other shouldn't + resp = await app_client.get( + '/aggregate?aggregations=total_count&grid_geohex_frequency_precision=2&filter-lang=cql2-json&filter={"op":"<=","args":[{"property": "properties.proj:epsg"},32756]}' + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + resp = await app_client.get( + '/aggregate?aggregations=total_count&grid_geohex_frequency_precision=2&filter-lang=cql2-json&filter={"op":">","args":[{"property": "properties.proj:epsg"},32756]}' + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 0 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_gte_post(app_client, ctx): + # there's one item that can match, so one of these queries should match it and the other shouldn't + params = { + "filter": { + "op": "<=", + "args": [ + {"property": "properties.proj:epsg"}, + ctx.item["properties"]["proj:epsg"], + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + params = { + "filter": { + "op": ">", + "args": [ + {"property": "properties.proj:epsg"}, + ctx.item["properties"]["proj:epsg"], + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 0 + + +@pytest.mark.asyncio +async def test_aggregate_filter_ext_and_get(app_client, ctx): + resp = await app_client.get( + '/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"<=","args":[{"property":"properties.proj:epsg"},32756]},{"op":"=","args":[{"property":"id"},"test-item"]}]}' + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_ext_and_get_id(app_client, ctx): + collection = ctx.item["collection"] + id = ctx.item["id"] + filter = f"id='{id}' AND collection='{collection}'" + resp = await app_client.get(f"/aggregate?aggregations=total_count&filter={filter}") + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_ext_and_get_cql2text_id(app_client, ctx): + collection = ctx.item["collection"] + id = ctx.item["id"] + filter = f"id='{id}' AND collection='{collection}'" + resp = await app_client.get( + f"/aggregate?aggregations=total_count&filter-lang=cql2-text&filter={filter}" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_ext_and_get_cql2text_cloud_cover(app_client, ctx): + collection = ctx.item["collection"] + cloud_cover = ctx.item["properties"]["eo:cloud_cover"] + filter = f"cloud_cover={cloud_cover} AND collection='{collection}'" + resp = await app_client.get( + f"/aggregate?aggregations=total_count&filter-lang=cql2-text&filter={filter}" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_ext_and_get_cql2text_cloud_cover_no_results( + app_client, ctx +): + collection = ctx.item["collection"] + cloud_cover = ctx.item["properties"]["eo:cloud_cover"] + 1 + filter = f"cloud_cover={cloud_cover} AND collection='{collection}'" + resp = await app_client.get( + f"/aggregate?aggregations=total_count&filter-lang=cql2-text&filter={filter}" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 0 + + +@pytest.mark.asyncio +async def test_aggregate_filter_ext_and_post(app_client, ctx): + params = { + "filter": { + "op": "and", + "args": [ + { + "op": "<=", + "args": [ + {"property": "properties.proj:epsg"}, + ctx.item["properties"]["proj:epsg"], + ], + }, + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_floats_get(app_client, ctx): + resp = await app_client.get( + """/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"=","args":[{"property":"id"},"test-item"]},{"op":">","args":[{"property":"properties.view:sun_elevation"},"-37.30891534"]},{"op":"<","args":[{"property":"properties.view:sun_elevation"},"-37.30691534"]}]}""" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + resp = await app_client.get( + """/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"=","args":[{"property":"id"},"test-item-7"]},{"op":">","args":[{"property":"properties.view:sun_elevation"},"-37.30891534"]},{"op":"<","args":[{"property":"properties.view:sun_elevation"},"-37.30691534"]}]}""" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 0 + + resp = await app_client.get( + """/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"=","args":[{"property":"id"},"test-item"]},{"op":">","args":[{"property":"properties.view:sun_elevation"},"-37.30591534"]},{"op":"<","args":[{"property":"properties.view:sun_elevation"},"-37.30491534"]}]}""" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 0 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_floats_post(app_client, ctx): + sun_elevation = ctx.item["properties"]["view:sun_elevation"] + + params = { + "filter": { + "op": "and", + "args": [ + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + { + "op": ">", + "args": [ + {"property": "properties.view:sun_elevation"}, + sun_elevation - 0.01, + ], + }, + { + "op": "<", + "args": [ + {"property": "properties.view:sun_elevation"}, + sun_elevation + 0.01, + ], + }, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_search_aggregate_extension_wildcard_cql2(app_client, ctx): + single_char = ctx.item["id"][:-1] + "_" + multi_char = ctx.item["id"][:-3] + "%" + + params = { + "filter": { + "op": "and", + "args": [ + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + { + "op": "like", + "args": [ + {"property": "id"}, + single_char, + ], + }, + { + "op": "like", + "args": [ + {"property": "id"}, + multi_char, + ], + }, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_wildcard_es(app_client, ctx): + single_char = ctx.item["id"][:-1] + "?" + multi_char = ctx.item["id"][:-3] + "*" + + params = { + "filter": { + "op": "and", + "args": [ + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + { + "op": "like", + "args": [ + {"property": "id"}, + single_char, + ], + }, + { + "op": "like", + "args": [ + {"property": "id"}, + multi_char, + ], + }, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_escape_chars(app_client, ctx): + esc_chars = ( + ctx.item["properties"]["landsat:product_id"].replace("_", "\\_")[:-1] + "_" + ) + + params = { + "filter": { + "op": "and", + "args": [ + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + { + "op": "like", + "args": [ + {"property": "properties.landsat:product_id"}, + esc_chars, + ], + }, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_in(app_client, ctx): + product_id = ctx.item["properties"]["landsat:product_id"] + + params = { + "filter": { + "op": "and", + "args": [ + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + { + "op": "in", + "args": [ + {"property": "properties.landsat:product_id"}, + [product_id], + ], + }, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_in_no_list(app_client, ctx): + product_id = ctx.item["properties"]["landsat:product_id"] + + params = { + "filter": { + "op": "and", + "args": [ + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + { + "op": "in", + "args": [ + {"property": "properties.landsat:product_id"}, + product_id, + ], + }, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 400 + assert resp.json() == { + "detail": f"Error with cql2_json filter: Arg {product_id} is not a list" + } + + +@pytest.mark.asyncio +async def test_aggregate_filter_extension_between(app_client, ctx): + sun_elevation = ctx.item["properties"]["view:sun_elevation"] + + params = { + "filter": { + "op": "and", + "args": [ + {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + { + "op": "between", + "args": [ + {"property": "properties.view:sun_elevation"}, + sun_elevation - 0.01, + sun_elevation + 0.01, + ], + }, + ], + }, + "filter-lang": "cql2-json", + "aggregations": "total_count", + } + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 From 86427f960af81a39ab1ac025dd84810fe7561a43 Mon Sep 17 00:00:00 2001 From: James Date: Sat, 29 Jun 2024 20:01:44 -0400 Subject: [PATCH 06/18] update for sfapi 3.0.0a4 --- stac_fastapi/core/setup.py | 6 +- .../core/extensions/aggregation.py | 144 ++++++++---------- .../tests/extensions/test_aggregation.py | 24 +-- 3 files changed, 80 insertions(+), 94 deletions(-) diff --git a/stac_fastapi/core/setup.py b/stac_fastapi/core/setup.py index 80376031..bb894b9b 100644 --- a/stac_fastapi/core/setup.py +++ b/stac_fastapi/core/setup.py @@ -10,9 +10,9 @@ "attrs>=23.2.0", "pydantic[dotenv]", "stac_pydantic>=3", - "stac-fastapi.types==3.0.0a3", - "stac-fastapi.api==3.0.0a3", - "stac-fastapi.extensions==3.0.0a3", + "stac-fastapi.types==3.0.0a4", + "stac-fastapi.api==3.0.0a4", + "stac-fastapi.extensions==3.0.0a4", "orjson", "overrides", "geojson-pydantic", diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index c4ab7976..1d219ab0 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -1,12 +1,12 @@ """Request model for the Aggregation extension.""" -import json import re from typing import Dict, List, Literal, Optional, Union from urllib.parse import unquote_plus, urljoin import attr import orjson +from attrs import define from fastapi import HTTPException, Request from pygeofilter.backends.cql2_json import to_cql2 from pygeofilter.parsers.cql2_text import parse as parse_cql2_text @@ -24,16 +24,22 @@ Aggregation, AggregationCollection, ) +from stac_fastapi.extensions.core.filter.request import ( + FilterExtensionGetRequest, + FilterExtensionPostRequest, +) from stac_fastapi.types.rfc3339 import DateTimeType FilterLang = Literal["cql-json", "cql2-json", "cql2-text"] -@attr.s -class OpenSearchAggregationExtensionGetRequest(AggregationExtensionGetRequest): +@define +class OpenSearchAggregationExtensionGetRequest( + AggregationExtensionGetRequest, FilterExtensionGetRequest +): """Add implementation specific query parameters to AggregationExtensionGetRequest for aggrgeation precision.""" - filter_lang: Optional[FilterLang] = attr.ib(default="cql2-text") + # filter_lang: Optional[FilterLang] = attr.ib(default="cql2-text") grid_geohex_frequency_precision: Optional[int] = attr.ib(default=None) grid_geohash_frequency_precision: Optional[int] = attr.ib(default=None) @@ -45,8 +51,9 @@ class OpenSearchAggregationExtensionGetRequest(AggregationExtensionGetRequest): geometry_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) -@attr.s -class OpenSearchAggregationExtensionPostRequest(AggregationExtensionPostRequest): +class OpenSearchAggregationExtensionPostRequest( + AggregationExtensionPostRequest, FilterExtensionPostRequest +): """Add implementation specific query parameters to AggregationExtensionPostRequest for aggrgeation precision.""" grid_geohex_frequency_precision: Optional[int] = None @@ -145,27 +152,6 @@ async def get_aggregations(self, collection_id: Optional[str] = None, **kwargs): type="AggregationCollection", aggregations=aggregations, links=links ) - def extract_aggregations( - self, aggregations_value: Union[str, List[str]] - ) -> List[str]: - """Parse the aggregations from a comma separated string or a list of strings.""" - if aggregations_value: - try: - if isinstance(aggregations_value, str): - if "," in aggregations_value: - aggs = aggregations_value.split(",") - else: - aggs = [aggregations_value] - else: - aggs = [aggregations_value] - except (json.JSONDecodeError, ValueError): - raise HTTPException( - status_code=400, detail="Invalid aggregations value" - ) - - return aggs - return [] - def extract_precision( self, precision: Union[int, None], min_value: int, max_value: int ) -> Optional[int]: @@ -182,11 +168,11 @@ def extract_precision( async def aggregate( self, - search_request: Optional[OpenSearchAggregationExtensionPostRequest] = None, + aggregate_request: Optional[OpenSearchAggregationExtensionPostRequest] = None, collections: Optional[List[str]] = [], datetime: Optional[DateTimeType] = None, intersects: Optional[str] = None, - filter_lang: Optional[FilterLang] = None, + filter_lang: Optional[str] = None, filter: Optional[str] = None, aggregations: Optional[str] = None, ids: Optional[List[str]] = None, @@ -206,25 +192,26 @@ async def aggregate( base_url = str(request.base_url) search = self.database.make_search() - if search_request is None: + if aggregate_request is None: # this is borrowed from stac-fastapi-pgstac # Kludgy fix because using factory does not allow alias for filter-lang # If the value is the default, check if the request is different. query_params = str(request.query_params) - if filter_lang == "cql2-text": + if filter_lang is None: match = re.search( r"filter-lang=([a-z0-9-]+)", query_params, re.IGNORECASE ) - if match and match.group(1) != "cql2-text": + if match: filter_lang = match.group(1) + else: + filter_lang = "cql2-text" - search_request = OpenSearchAggregationExtensionGetRequest( + aggregate_request = OpenSearchAggregationExtensionGetRequest( collections=",".join(collections) if collections else None, datetime=datetime, intersects=intersects, filter=filter, - filter_lang=filter_lang, - aggregations=aggregations, + aggregations=",".join(aggregations) if aggregations else None, ids=ids, bbox=bbox, grid_geohex_frequency_precision=grid_geohex_frequency_precision, @@ -236,44 +223,39 @@ async def aggregate( geometry_geohash_grid_frequency_precision=geometry_geohash_grid_frequency_precision, geometry_geotile_grid_frequency_precision=geometry_geotile_grid_frequency_precision, ) - - if search_request.aggregations: - aggregations_requested = self.extract_aggregations( - search_request.aggregations - ) else: - aggregations_requested = [] + filter_lang = "cql2-json" - if search_request.ids: + if aggregate_request.ids: search = self.database.apply_ids_filter( - search=search, item_ids=search_request.ids + search=search, item_ids=aggregate_request.ids ) - if search_request.datetime: - datetime_search = self._return_date(search_request.datetime) + if aggregate_request.datetime: + datetime_search = self._return_date(aggregate_request.datetime) search = self.database.apply_datetime_filter( search=search, datetime_search=datetime_search ) - if search_request.bbox: - bbox = search_request.bbox + if aggregate_request.bbox: + bbox = aggregate_request.bbox if len(bbox) == 6: bbox = [bbox[0], bbox[1], bbox[3], bbox[4]] search = self.database.apply_bbox_filter(search=search, bbox=bbox) - if search_request.intersects: + if aggregate_request.intersects: search = self.database.apply_intersects_filter( - search=search, intersects=search_request.intersects + search=search, intersects=aggregate_request.intersects ) - if search_request.collections: + if aggregate_request.collections: search = self.database.apply_collections_filter( - search=search, collection_ids=search_request.collections + search=search, collection_ids=aggregate_request.collections ) # validate that aggregations are supported for all collections # if aggregations are not defined for a collection, any aggregation may be requested - for collection_id in search_request.collections: + for collection_id in aggregate_request.collections: if self.database.check_collection_exists(collection_id): collection = await self.database.find_collection(collection_id) if isinstance(collection, Exception): @@ -282,93 +264,97 @@ async def aggregate( if ( collection and collection.get("aggregations") - and aggregations_requested + and aggregate_request.aggregations ): supported_aggregations = [ x["name"] for x in collection.get("aggregations") ] - for agg_name in aggregations_requested: + for agg_name in aggregate_request.aggregations: if agg_name not in supported_aggregations: raise HTTPException( status_code=400, detail=f"Aggregation {agg_name} not supported by collection {collection_id}", ) else: - for agg_name in aggregations_requested: + for agg_name in aggregate_request.aggregations: if agg_name not in self.ALL_AGGREGATION_NAMES: raise HTTPException( status_code=400, detail=f"Aggregation {agg_name} not supported at catalog level", ) - if search_request.filter: - if search_request.filter_lang == "cql2-text": - search_request.filter = orjson.loads( - unquote_plus(to_cql2(parse_cql2_text(search_request.filter))) + if aggregate_request.filter: + if filter_lang == "cql2-text": + aggregate_request.filter = orjson.loads( + unquote_plus(to_cql2(parse_cql2_text(aggregate_request.filter))) ) - elif search_request.filter_lang == "cql2-json": - if isinstance(search_request.filter, str): - search_request.filter = orjson.loads( - unquote_plus(search_request.filter) + elif filter_lang == "cql2-json": + if isinstance(aggregate_request.filter, str): + aggregate_request.filter = orjson.loads( + unquote_plus(aggregate_request.filter) ) else: raise HTTPException( status_code=400, - detail=f"Unknown filter-lang: {search_request.filter_lang}. Filter-lang or cql2-json and cql2-text are supported.", + detail=f"Unknown filter-lang: {aggregate_request.filter_lang}. Filter-lang or cql2-json and cql2-text are supported.", ) try: - search = self.database.apply_cql2_filter(search, search_request.filter) + search = self.database.apply_cql2_filter( + search, aggregate_request.filter + ) except Exception as e: raise HTTPException( status_code=400, detail=f"Error with cql2_json filter: {e}" ) geohash_precision = self.extract_precision( - search_request.grid_geohash_frequency_precision, + aggregate_request.grid_geohash_frequency_precision, 1, self.MAX_GEOHASH_PRECISION, ) geohex_precision = self.extract_precision( - search_request.grid_geohex_frequency_precision, 0, self.MAX_GEOHEX_PRECISION + aggregate_request.grid_geohex_frequency_precision, + 0, + self.MAX_GEOHEX_PRECISION, ) geotile_precision = self.extract_precision( - search_request.grid_geotile_frequency_precision, + aggregate_request.grid_geotile_frequency_precision, 0, self.MAX_GEOTILE_PRECISION, ) centroid_geohash_grid_precision = self.extract_precision( - search_request.centroid_geohash_grid_frequency_precision, + aggregate_request.centroid_geohash_grid_frequency_precision, 1, self.MAX_GEOHASH_PRECISION, ) centroid_geohex_grid_precision = self.extract_precision( - search_request.centroid_geohex_grid_frequency_precision, + aggregate_request.centroid_geohex_grid_frequency_precision, 0, self.MAX_GEOHEX_PRECISION, ) centroid_geotile_grid_precision = self.extract_precision( - search_request.centroid_geotile_grid_frequency_precision, + aggregate_request.centroid_geotile_grid_frequency_precision, 0, self.MAX_GEOTILE_PRECISION, ) geometry_geohash_grid_precision = self.extract_precision( - search_request.geometry_geohash_grid_frequency_precision, + aggregate_request.geometry_geohash_grid_frequency_precision, 1, self.MAX_GEOHASH_PRECISION, ) # geometry_geohex_grid_frequency_precision = self.extract_precision( - # search_request.geometry_geohex_grid_frequency_precision, 0, self.MAX_GEOHASH_PRECISION + # aggregate_request.geometry_geohex_grid_frequency_precision, 0, self.MAX_GEOHASH_PRECISION # ) geometry_geotile_grid_precision = self.extract_precision( - search_request.geometry_geotile_grid_frequency_precision, + aggregate_request.geometry_geotile_grid_frequency_precision, 0, self.MAX_GEOTILE_PRECISION, ) @@ -376,7 +362,7 @@ async def aggregate( try: db_response = await self.database.aggregate( collections, - aggregations_requested, + aggregate_request.aggregations, search, geohash_precision, geohex_precision, @@ -395,7 +381,7 @@ async def aggregate( if db_response: result_aggs = db_response.get("aggregations", {}) - if "total_count" in aggregations_requested: + if "total_count" in aggregate_request.aggregations: aggs.append( Aggregation( name="total_count", @@ -404,7 +390,7 @@ async def aggregate( ) ) - if "datetime_max" in aggregations_requested: + if "datetime_max" in aggregate_request.aggregations: aggs.append( Aggregation( name="datetime_max", @@ -415,7 +401,7 @@ async def aggregate( ) ) - if "datetime_min" in aggregations_requested: + if "datetime_min" in aggregate_request.aggregations: aggs.append( Aggregation( name="datetime_min", @@ -427,7 +413,7 @@ async def aggregate( ) for agg_name in self.ALL_AGGREGATION_NAMES: - if agg_name in aggregations_requested: + if agg_name in aggregate_request.aggregations: aggs.append( Aggregation( name=agg_name, diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index b5e9c13b..697a4226 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -92,7 +92,7 @@ async def test_post_collection_aggregations(app_client, load_test_data): @pytest.mark.asyncio -async def test_aggrgegate_filter_extension_eq_get(app_client, ctx): +async def test_aggregate_filter_extension_eq_get(app_client, ctx): resp = await app_client.get( '/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"=","args":[{"property":"id"},"test-item"]}' ) @@ -105,7 +105,7 @@ async def test_aggregate_filter_extension_eq_post(app_client, ctx): params = { "filter": {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) assert resp.status_code == 200 @@ -142,7 +142,7 @@ async def test_aggregate_filter_extension_gte_post(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -158,7 +158,7 @@ async def test_aggregate_filter_extension_gte_post(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -245,7 +245,7 @@ async def test_aggregate_filter_ext_and_post(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -303,7 +303,7 @@ async def test_aggregate_filter_extension_floats_post(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -338,7 +338,7 @@ async def test_search_aggregate_extension_wildcard_cql2(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -374,7 +374,7 @@ async def test_aggregate_filter_extension_wildcard_es(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -404,7 +404,7 @@ async def test_aggregate_filter_extension_escape_chars(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -432,7 +432,7 @@ async def test_aggregate_filter_extension_in(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -460,7 +460,7 @@ async def test_aggregate_filter_extension_in_no_list(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) @@ -491,7 +491,7 @@ async def test_aggregate_filter_extension_between(app_client, ctx): ], }, "filter-lang": "cql2-json", - "aggregations": "total_count", + "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) From 2986432e40c2efead9fa039ea0655550ac0cdfe8 Mon Sep 17 00:00:00 2001 From: James Date: Mon, 1 Jul 2024 00:32:52 -0400 Subject: [PATCH 07/18] full opensearch support with tests --- .../core/extensions/aggregation.py | 260 +++++++------ .../stac_fastapi/opensearch/database_logic.py | 33 +- stac_fastapi/tests/data/collection.json | 29 +- stac_fastapi/tests/data/test_collection.json | 29 +- .../tests/extensions/test_aggregation.py | 353 +++++++++++++++++- 5 files changed, 530 insertions(+), 174 deletions(-) diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index 1d219ab0..d1dca814 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -6,7 +6,6 @@ import attr import orjson -from attrs import define from fastapi import HTTPException, Request from pygeofilter.backends.cql2_json import to_cql2 from pygeofilter.parsers.cql2_text import parse as parse_cql2_text @@ -33,17 +32,12 @@ FilterLang = Literal["cql-json", "cql2-json", "cql2-text"] -@define +@attr.s class OpenSearchAggregationExtensionGetRequest( AggregationExtensionGetRequest, FilterExtensionGetRequest ): """Add implementation specific query parameters to AggregationExtensionGetRequest for aggrgeation precision.""" - # filter_lang: Optional[FilterLang] = attr.ib(default="cql2-text") - - grid_geohex_frequency_precision: Optional[int] = attr.ib(default=None) - grid_geohash_frequency_precision: Optional[int] = attr.ib(default=None) - grid_geotile_frequency_precision: Optional[int] = attr.ib(default=None) centroid_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) centroid_geohex_grid_frequency_precision: Optional[int] = attr.ib(default=None) centroid_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) @@ -56,9 +50,6 @@ class OpenSearchAggregationExtensionPostRequest( ): """Add implementation specific query parameters to AggregationExtensionPostRequest for aggrgeation precision.""" - grid_geohex_frequency_precision: Optional[int] = None - grid_geohash_frequency_precision: Optional[int] = None - grid_geotile_frequency_precision: Optional[int] = None centroid_geohash_grid_frequency_precision: Optional[int] = None centroid_geohex_grid_frequency_precision: Optional[int] = None centroid_geotile_grid_frequency_precision: Optional[int] = None @@ -83,25 +74,74 @@ class EsAsyncAggregationClient(AsyncBaseAggregationClient): "data_type": "frequency_distribution", "frequency_distribution_data_type": "datetime", }, + { + "name": "collection_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, + { + "name": "sun_elevation_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric", + }, + { + "name": "platform_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, + { + "name": "sun_azimuth_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric", + }, + { + "name": "off_nadir_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric", + }, + { + "name": "cloud_cover_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric", + }, ] - ALL_AGGREGATION_NAMES = [agg["name"] for agg in DEFAULT_AGGREGATIONS] + [ - "collection_frequency", - "grid_code_frequency", - "grid_geohash_frequency", - "grid_geohex_frequency", - "grid_geotile_frequency", - "centroid_geohash_grid_frequency", - "centroid_geohex_grid_frequency", - "centroid_geotile_grid_frequency", - "geometry_geohash_grid_frequency", - # 'geometry_geohex_grid_frequency', - "geometry_geotile_grid_frequency", - "platform_frequency", - "sun_elevation_frequency", - "sun_azimuth_frequency", - "off_nadir_frequency", - "cloud_cover_frequency", + GEO_AGGREGATIONS = [ + { + "name": "grid_code_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, + { + "name": "centroid_geohash_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, + { + "name": "centroid_geohex_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, + { + "name": "centroid_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, + { + "name": "geometry_geohash_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, + # { + # "name": "geometry_geohex_grid_frequency", + # "data_type": "frequency_distribution", + # "frequency_distribution_data_type": "string", + # }, + { + "name": "geometry_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string", + }, ] MAX_GEOHASH_PRECISION = 12 @@ -166,6 +206,34 @@ def extract_precision( else: return min_value + def frequency_agg(self, es_aggs, name, data_type): + """Format an aggregation for a frequency distribution aggregation.""" + buckets = [] + for bucket in es_aggs.get(name, {}).get("buckets", []): + bucket_data = { + "key": bucket.get("key_as_string") or bucket.get("key"), + "data_type": data_type, + "frequency": bucket.get("doc_count"), + "to": bucket.get("to"), + "from": bucket.get("from"), + } + buckets.append(bucket_data) + return Aggregation( + name=name, + data_type="frequency_distribution", + overflow=es_aggs.get(name, {}).get("sum_other_doc_count", 0), + buckets=buckets, + ) + + def metric_agg(self, es_aggs, name, data_type): + """Format an aggregation for a metric aggregation.""" + return Aggregation( + name=name, + data_type=data_type, + value=es_aggs.get(name, {}).get("value_as_string") + or es_aggs.get(name, {}).get("value"), + ) + async def aggregate( self, aggregate_request: Optional[OpenSearchAggregationExtensionPostRequest] = None, @@ -177,9 +245,6 @@ async def aggregate( aggregations: Optional[str] = None, ids: Optional[List[str]] = None, bbox: Optional[BBox] = None, - grid_geohex_frequency_precision: Optional[int] = None, - grid_geohash_frequency_precision: Optional[int] = None, - grid_geotile_frequency_precision: Optional[int] = None, centroid_geohash_grid_frequency_precision: Optional[int] = None, centroid_geohex_grid_frequency_precision: Optional[int] = None, centroid_geotile_grid_frequency_precision: Optional[int] = None, @@ -214,9 +279,6 @@ async def aggregate( aggregations=",".join(aggregations) if aggregations else None, ids=ids, bbox=bbox, - grid_geohex_frequency_precision=grid_geohex_frequency_precision, - grid_geohash_frequency_precision=grid_geohash_frequency_precision, - grid_geotile_frequency_precision=grid_geotile_frequency_precision, centroid_geohash_grid_frequency_precision=centroid_geohash_grid_frequency_precision, centroid_geohex_grid_frequency_precision=centroid_geohex_grid_frequency_precision, centroid_geotile_grid_frequency_precision=centroid_geotile_grid_frequency_precision, @@ -225,6 +287,14 @@ async def aggregate( ) else: filter_lang = "cql2-json" + if ( + aggregate_request.aggregations is None + or aggregate_request.aggregations == [] + ): + raise HTTPException( + status_code=400, + detail="No 'aggregations' found. Use '/aggregations' to return available aggregations", + ) if aggregate_request.ids: search = self.database.apply_ids_filter( @@ -254,34 +324,31 @@ async def aggregate( search=search, collection_ids=aggregate_request.collections ) # validate that aggregations are supported for all collections - # if aggregations are not defined for a collection, any aggregation may be requested for collection_id in aggregate_request.collections: - if self.database.check_collection_exists(collection_id): - collection = await self.database.find_collection(collection_id) - if isinstance(collection, Exception): - return collection - - if ( - collection - and collection.get("aggregations") - and aggregate_request.aggregations - ): - supported_aggregations = [ - x["name"] for x in collection.get("aggregations") - ] - for agg_name in aggregate_request.aggregations: - if agg_name not in supported_aggregations: - raise HTTPException( - status_code=400, - detail=f"Aggregation {agg_name} not supported by collection {collection_id}", - ) - else: - for agg_name in aggregate_request.aggregations: - if agg_name not in self.ALL_AGGREGATION_NAMES: - raise HTTPException( - status_code=400, - detail=f"Aggregation {agg_name} not supported at catalog level", - ) + aggs = await self.get_aggregations( + collection_id=collection_id, request=request + ) + supported_aggregations = ( + aggs["aggregations"] + self.DEFAULT_AGGREGATIONS + ) + # supported_aggregations = set([x["name"] for x in aggs["aggregations"]] + [x["name"] for x in self.DEFAULT_AGGREGATIONS]) + + for agg_name in aggregate_request.aggregations: + if agg_name not in set([x["name"] for x in supported_aggregations]): + raise HTTPException( + status_code=400, + detail=f"Aggregation {agg_name} not supported by collection {collection_id}", + ) + else: + # Validate that the aggregations requested are supported by the catalog + aggs = await self.get_aggregations(request=request) + supported_aggregations = aggs["aggregations"] + for agg_name in aggregate_request.aggregations: + if agg_name not in [x["name"] for x in supported_aggregations]: + raise HTTPException( + status_code=400, + detail=f"Aggregation {agg_name} not supported at catalog level", + ) if aggregate_request.filter: if filter_lang == "cql2-text": @@ -307,24 +374,6 @@ async def aggregate( status_code=400, detail=f"Error with cql2_json filter: {e}" ) - geohash_precision = self.extract_precision( - aggregate_request.grid_geohash_frequency_precision, - 1, - self.MAX_GEOHASH_PRECISION, - ) - - geohex_precision = self.extract_precision( - aggregate_request.grid_geohex_frequency_precision, - 0, - self.MAX_GEOHEX_PRECISION, - ) - - geotile_precision = self.extract_precision( - aggregate_request.grid_geotile_frequency_precision, - 0, - self.MAX_GEOTILE_PRECISION, - ) - centroid_geohash_grid_precision = self.extract_precision( aggregate_request.centroid_geohash_grid_frequency_precision, 1, @@ -364,9 +413,6 @@ async def aggregate( collections, aggregate_request.aggregations, search, - geohash_precision, - geohex_precision, - geotile_precision, centroid_geohash_grid_precision, centroid_geohex_grid_precision, centroid_geotile_grid_precision, @@ -381,48 +427,18 @@ async def aggregate( if db_response: result_aggs = db_response.get("aggregations", {}) - if "total_count" in aggregate_request.aggregations: - aggs.append( - Aggregation( - name="total_count", - data_type="integer", - value=result_aggs.get("total_count", {}).get("value", None), - ) - ) - - if "datetime_max" in aggregate_request.aggregations: - aggs.append( - Aggregation( - name="datetime_max", - data_type="datetime", - value=result_aggs.get("datetime_max", {}).get( - "value_as_string", None - ), - ) - ) - - if "datetime_min" in aggregate_request.aggregations: - aggs.append( - Aggregation( - name="datetime_min", - data_type="datetime", - value=result_aggs.get("datetime_min", {}).get( - "value_as_string", None - ), - ) - ) - - for agg_name in self.ALL_AGGREGATION_NAMES: - if agg_name in aggregate_request.aggregations: - aggs.append( - Aggregation( - name=agg_name, - data_type="string", - value=result_aggs.get(agg_name, {}).get( - "value_as_string", None - ), + for agg in supported_aggregations + self.GEO_AGGREGATIONS: + if agg["name"] in aggregate_request.aggregations: + if agg["name"].endswith("_frequency"): + aggs.append( + self.frequency_agg( + result_aggs, agg["name"], agg["data_type"] + ) + ) + else: + aggs.append( + self.metric_agg(result_aggs, agg["name"], agg["data_type"]) ) - ) links = [ { diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py index 5ee6d75f..5b9b0875 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py @@ -168,7 +168,7 @@ def indices(collection_ids: Optional[List[str]]) -> str: Returns: A string of comma-separated index names. If `collection_ids` is None, returns the default indices. """ - if collection_ids is None: + if collection_ids is None or collection_ids == []: return ITEM_INDICES else: return ",".join([index_by_collection_id(c) for c in collection_ids]) @@ -672,16 +672,13 @@ async def aggregate( collection_ids: Optional[List[str]], aggregations: List[str], search: Search, - geohash_precision: int, - geohex_precision: int, - geotile_precision: int, centroid_geohash_grid_precision: int, centroid_geohex_grid_precision: int, centroid_geotile_grid_precision: int, geometry_geohash_grid_precision: int, # geometry_geohex_grid_precision: int, geometry_geotile_grid_precision: int, - ignore_unavailable: bool = True, + ignore_unavailable: Optional[bool] = True, ): """Return aggregations of STAC Items.""" ALL_AGGREGATIONS = { @@ -740,31 +737,6 @@ async def aggregate( k: v for k, v in ALL_AGGREGATIONS.items() if k in aggregations } - # deprecated centroid - if "grid_geohash_frequency" in aggregations: - search_body["aggregations"]["grid_geohash_frequency"] = { - "geohash_grid": { - "field": "properties.proj:centroid", - "precision": geohash_precision, - } - } - - if "grid_geohex_frequency" in aggregations: - search_body["aggregations"]["grid_geohex_frequency"] = { - "geohex_grid": { - "field": "properties.proj:centroid", - "precision": geohex_precision, - } - } - - if "grid_geotile_frequency" in aggregations: - search_body["aggregations"]["grid_geotile_frequency"] = { - "geotile_grid": { - "field": "properties.proj:centroid", - "precision": geotile_precision, - } - } - # centroid if "centroid_geohash_grid_frequency" in aggregations: search_body["aggregations"]["centroid_geohash_grid_frequency"] = { @@ -816,7 +788,6 @@ async def aggregate( } index_param = indices(collection_ids) - search_task = asyncio.create_task( self.client.search( index=index_param, diff --git a/stac_fastapi/tests/data/collection.json b/stac_fastapi/tests/data/collection.json index 05b41738..92fdd93e 100644 --- a/stac_fastapi/tests/data/collection.json +++ b/stac_fastapi/tests/data/collection.json @@ -53,35 +53,50 @@ "data_type": "frequency_distribution", "frequency_distribution_data_type": "numeric" }, + { + "name": "platform_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, { "name": "sun_azimuth_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "numeric" }, { - "name": "geometry_geohash_grid_frequency", + "name": "off_nadir_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "numeric" }, { - "name": "grid_code_frequency", + "name": "cloud_cover_frequency", "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" + "frequency_distribution_data_type": "numeric" }, { - "name": "grid_geohex_frequency", + "name": "grid_code_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string" }, { - "name": "grid_geohash_frequency", + "name": "centroid_geohash_grid_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string" }, { - "name": "grid_geotile_frequency", + "name": "centroid_geohex_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "centroid_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "geometry_geohash_grid_frequency", "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" + "frequency_distribution_data_type": "numeric" }, { "name": "geometry_geotile_grid_frequency", diff --git a/stac_fastapi/tests/data/test_collection.json b/stac_fastapi/tests/data/test_collection.json index 05b41738..92fdd93e 100644 --- a/stac_fastapi/tests/data/test_collection.json +++ b/stac_fastapi/tests/data/test_collection.json @@ -53,35 +53,50 @@ "data_type": "frequency_distribution", "frequency_distribution_data_type": "numeric" }, + { + "name": "platform_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, { "name": "sun_azimuth_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "numeric" }, { - "name": "geometry_geohash_grid_frequency", + "name": "off_nadir_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "numeric" }, { - "name": "grid_code_frequency", + "name": "cloud_cover_frequency", "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" + "frequency_distribution_data_type": "numeric" }, { - "name": "grid_geohex_frequency", + "name": "grid_code_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string" }, { - "name": "grid_geohash_frequency", + "name": "centroid_geohash_grid_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string" }, { - "name": "grid_geotile_frequency", + "name": "centroid_geohex_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "centroid_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "geometry_geohash_grid_frequency", "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" + "frequency_distribution_data_type": "numeric" }, { "name": "geometry_geotile_grid_frequency", diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index 697a4226..b10b8349 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -19,7 +19,7 @@ async def test_aggregation_extension_landing_page_link(app_client, ctx): @pytest.mark.asyncio -async def test_aggregation_extension_collection_link(app_client, load_test_data): +async def test_aggregation_extension_collection_link(app_client, ctx, load_test_data): """Test if the `aggregations` and `aggregate` links are included in the collection links""" test_collection = load_test_data("test_collection.json") test_collection["id"] = "test" @@ -43,7 +43,7 @@ async def test_get_catalog_aggregations(app_client): resp = await app_client.get("/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 4 + assert len(resp.json()["aggregations"]) == 10 @pytest.mark.asyncio @@ -52,11 +52,11 @@ async def test_post_catalog_aggregations(app_client): resp = await app_client.post("/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 4 + assert len(resp.json()["aggregations"]) == 10 @pytest.mark.asyncio -async def test_get_collection_aggregations(app_client, load_test_data): +async def test_get_collection_aggregations(app_client, ctx, load_test_data): # there's one item that can match, so one of these queries should match it and the other shouldn't test_collection = load_test_data("test_collection.json") @@ -67,14 +67,14 @@ async def test_get_collection_aggregations(app_client, load_test_data): resp = await app_client.get(f"/collections/{test_collection['id']}/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 12 + assert len(resp.json()["aggregations"]) == 15 resp = await app_client.delete(f"/collections/{test_collection['id']}") assert resp.status_code == 204 @pytest.mark.asyncio -async def test_post_collection_aggregations(app_client, load_test_data): +async def test_post_collection_aggregations(app_client, ctx, load_test_data): # there's one item that can match, so one of these queries should match it and the other shouldn't test_collection = load_test_data("test_collection.json") @@ -85,7 +85,7 @@ async def test_post_collection_aggregations(app_client, load_test_data): resp = await app_client.post(f"/collections/{test_collection['id']}/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 12 + assert len(resp.json()["aggregations"]) == 15 resp = await app_client.delete(f"/collections/{test_collection['id']}") assert resp.status_code == 204 @@ -497,3 +497,342 @@ async def test_aggregate_filter_extension_between(app_client, ctx): assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 1 + + +# Test each aggregation + + +@pytest.mark.asyncio +async def test_post_aggregate_total_count(app_client, ctx): + + params = { + "aggregations": ["total_count"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_get_aggregate_total_count(app_client, ctx): + + resp = await app_client.get("/aggregate?aggregations=total_count") + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + +@pytest.mark.asyncio +async def test_get_aggregate_datetime_max(app_client, ctx): + + resp = await app_client.get("/aggregate?aggregations=datetime_max") + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + + +@pytest.mark.asyncio +async def test_post_aggregate_datetime_max(app_client, ctx): + + params = { + "aggregations": ["datetime_max"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + + +@pytest.mark.asyncio +async def test_get_aggregate_datetime_min(app_client, ctx): + + resp = await app_client.get("/aggregate?aggregations=datetime_min") + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + + +@pytest.mark.asyncio +async def test_post_aggregate_datetime_min(app_client, ctx): + + params = { + "aggregations": ["datetime_min"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + + +@pytest.mark.asyncio +async def test_get_aggregate_datetime_frequency(app_client, ctx): + + resp = await app_client.get("/aggregate?aggregations=datetime_frequency") + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert ( + resp.json()["aggregations"][0]["buckets"][0]["key"] + == "2020-02-01T00:00:00.000Z" + ) + + +@pytest.mark.asyncio +async def test_post_aggregate_datetime_frequency(app_client, ctx): + + params = { + "aggregations": ["datetime_frequency"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert ( + resp.json()["aggregations"][0]["buckets"][0]["key"] + == "2020-02-01T00:00:00.000Z" + ) + + +@pytest.mark.asyncio +async def test_get_aggregate_collection_frequency(app_client, ctx): + + resp = await app_client.get("/aggregate?aggregations=collection_frequency") + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "test-collection" + + +@pytest.mark.asyncio +async def test_post_aggregate_collection_frequency(app_client, ctx): + + params = { + "aggregations": ["collection_frequency"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "test-collection" + + +@pytest.mark.asyncio +async def test_get_aggregate_attribute_frequency(app_client, ctx): + + resp = await app_client.get( + "/aggregate?aggregations=platform_frequency&collections=test-collection" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "landsat-8" + + +@pytest.mark.asyncio +async def test_post_aggregate_attribute_frequency(app_client, ctx): + + params = { + "aggregations": ["platform_frequency"], + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "landsat-8" + + +@pytest.mark.asyncio +async def test_post_aggregate_unsupported_aggregation(app_client, ctx): + + params = { + "aggregations": ["this_is_not_an_aggregation"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 400 + + +@pytest.mark.asyncio +async def test_post_aggregate_unsupported_collection_aggregation(app_client, ctx): + + params = { + "aggregations": ["this_is_not_an_aggregation"], + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 400 + + +@pytest.mark.asyncio +async def test_get_aggregate_precision_outside_range(app_client, ctx): + + resp = await app_client.get( + "/aggregate?aggregations=centroid_geohash_grid_frequency¢roid_geohash_grid_frequency_precision=55" + ) + + assert resp.status_code == 400 + + +@pytest.mark.asyncio +async def test_post_aggregate_precision_outside_range(app_client, ctx): + + params = { + "aggregations": ["centroid_geohash_grid_frequency"], + "centroid_geohash_grid_frequency_precision": 55, + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 400 + + +@pytest.mark.asyncio +async def test_get_aggregate_centroid_geohash_frequency(app_client, ctx): + + resp = await app_client.get( + "/aggregate?aggregations=centroid_geohash_grid_frequency¢roid_geohash_grid_frequency_precision=5&collections=test-collection" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "r6572" + + +@pytest.mark.asyncio +async def test_post_aggregate_centroid_geohash_frequency(app_client, ctx): + + params = { + "aggregations": ["centroid_geohash_grid_frequency"], + "centroid_geohash_grid_frequency_precision": 5, + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "r6572" + + +@pytest.mark.asyncio +async def test_get_aggregate_centroid_geohex_frequency(app_client, ctx): + + resp = await app_client.get( + "/aggregate?aggregations=centroid_geohex_grid_frequency¢roid_geohex_grid_frequency_precision=5&collections=test-collection" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "85be0a8ffffffff" + + +@pytest.mark.asyncio +async def test_post_aggregate_centroid_geohex_frequency(app_client, ctx): + + params = { + "aggregations": ["centroid_geohex_grid_frequency"], + "centroid_geohex_grid_frequency_precision": 5, + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "85be0a8ffffffff" + + +@pytest.mark.asyncio +async def test_get_aggregate_centroid_geotile_frequency(app_client, ctx): + + resp = await app_client.get( + "/aggregate?aggregations=centroid_geotile_grid_frequency¢roid_geotile_grid_frequency_precision=5&collections=test-collection" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "5/29/19" + + +@pytest.mark.asyncio +async def test_post_aggregate_centroid_geotile_frequency(app_client, ctx): + + params = { + "aggregations": ["centroid_geotile_grid_frequency"], + "centroid_geotile_grid_frequency_precision": 5, + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "5/29/19" + + +@pytest.mark.asyncio +async def test_get_aggregate_geometry_geotile_frequency(app_client, ctx): + + resp = await app_client.get( + "/aggregate?aggregations=geometry_geotile_grid_frequency&geometry_geotile_grid_frequency_precision=5&collections=test-collection" + ) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "5/29/19" + + +@pytest.mark.asyncio +async def test_post_aggregate_geometry_geotile_frequency(app_client, ctx): + + params = { + "aggregations": ["geometry_geotile_grid_frequency"], + "geometry_geotile_grid_frequency_precision": 5, + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["buckets"][0]["frequency"] == 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "5/29/19" + + +@pytest.mark.asyncio +async def test_get_aggregate_geometry_geohash_frequency(app_client, ctx): + + resp = await app_client.get( + "/aggregate?aggregations=geometry_geohash_grid_frequency&geometry_geohash_grid_frequency_precision=5&collections=test-collection" + ) + + assert resp.status_code == 200 + assert len(resp.json()["aggregations"][0]["buckets"]) > 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "r6hhb" + + +@pytest.mark.asyncio +async def test_post_aggregate_geometry_geohash_frequency(app_client, ctx): + + params = { + "aggregations": ["geometry_geohash_grid_frequency"], + "geometry_geohash_grid_frequency_precision": 5, + "collections": ["test-collection"], + } + + resp = await app_client.post("/aggregate", json=params) + + assert resp.status_code == 200 + assert len(resp.json()["aggregations"][0]["buckets"]) > 1 + assert resp.json()["aggregations"][0]["buckets"][0]["key"] == "r6hhb" From 8451fdb0d6ad24b4891a05808157b2eb0f1969b7 Mon Sep 17 00:00:00 2001 From: James Date: Mon, 1 Jul 2024 01:34:22 -0400 Subject: [PATCH 08/18] elasticsearch --- README.md | 106 ++++++++++++++ .../core/extensions/aggregation.py | 34 +---- .../stac_fastapi/elasticsearch/app.py | 22 ++- .../elasticsearch/database_logic.py | 138 ++++++++++++++++++ .../opensearch/stac_fastapi/opensearch/app.py | 8 +- .../stac_fastapi/opensearch/database_logic.py | 6 +- stac_fastapi/tests/conftest.py | 12 +- .../tests/extensions/test_aggregation.py | 28 +++- 8 files changed, 305 insertions(+), 49 deletions(-) diff --git a/README.md b/README.md index 2e56c452..d4b8754c 100644 --- a/README.md +++ b/README.md @@ -278,3 +278,109 @@ The modified Items with lowercase identifiers will now be visible to users acces ## Auth Authentication is an optional feature that can be enabled through `Route Dependencies` examples can be found and a more detailed explanation in [examples/auth](examples/auth). + + +## Aggregation + +Sfeos supports the STAC API [Aggregation Extension](https://github.com/stac-api-extensions/aggregation). This enables geospatial aggregation of points and geometries, as well as frequency distribution aggregation of any other property including dates. Aggregations can be defined at the root Catalog level (`/aggregations`) and at the Collection level (`//aggregations`). The `/aggregate` route also fully supports base search and the STAC API [Filter Extension](https://github.com/stac-api-extensions/filter). Any query made with `/search` may also be executed with `/aggregate`, provided that the relevant aggregation fields are available, + + +A field named `aggregations` should be added to the Collection object for the collection for which the aggregations are available, for example: + +```json +"aggregations": [ + { + "name": "total_count", + "data_type": "integer" + }, + { + "name": "datetime_max", + "data_type": "datetime" + }, + { + "name": "datetime_min", + "data_type": "datetime" + }, + { + "name": "datetime_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "datetime" + }, + { + "name": "sun_elevation_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "platform_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "sun_azimuth_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "off_nadir_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "cloud_cover_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "grid_code_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "centroid_geohash_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "centroid_geohex_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "centroid_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + }, + { + "name": "geometry_geohash_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "numeric" + }, + { + "name": "geometry_geotile_grid_frequency", + "data_type": "frequency_distribution", + "frequency_distribution_data_type": "string" + } +] + ``` + +Available aggregations are: + +- total_count (count of total items) +- collection_frequency (Item `collection` field) +- platform_frequency (Item.Properties.platform) +- cloud_cover_frequency (Item.Properties.eo:cloud_cover) +- datetime_frequency (Item.Properties.datetime, monthly interval) +- datetime_min (earliest Item.Properties.datetime) +- datetime_max (latest Item.Properties.datetime) +- sun_elevation_frequency (Item.Properties.view:sun_elevation) +- sun_azimuth_frequency (Item.Properties.view:sun_azimuth) +- off_nadir_frequency (Item.Properties.view:off_nadir) +- grid_code_frequency (Item.Properties.grid:code) +- centroid_geohash_grid_frequency ([geohash grid](https://opensearch.org/docs/latest/aggregations/bucket/geohash-grid/) on Item.Properties.proj:centroid) +- centroid_geohex_grid_frequency ([geohex grid](https://opensearch.org/docs/latest/aggregations/bucket/geohex-grid/) on Item.Properties.proj:centroid) +- centroid_geotile_grid_frequency (geotile on Item.Properties.proj:centroid) +- geometry_geohash_grid_frequency ([geohash grid](https://opensearch.org/docs/latest/aggregations/bucket/geohash-grid/) on Item.geometry) +- geometry_geotile_grid_frequency ([geotile grid](https://opensearch.org/docs/latest/aggregations/bucket/geotile-grid/) on Item.geometry) + +Support for additional fields and new aggregations can be added in the associated `database_logic.py` file. \ No newline at end of file diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index d1dca814..0b4d66ed 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -33,7 +33,7 @@ @attr.s -class OpenSearchAggregationExtensionGetRequest( +class EsAggregationExtensionGetRequest( AggregationExtensionGetRequest, FilterExtensionGetRequest ): """Add implementation specific query parameters to AggregationExtensionGetRequest for aggrgeation precision.""" @@ -45,7 +45,7 @@ class OpenSearchAggregationExtensionGetRequest( geometry_geotile_grid_frequency_precision: Optional[int] = attr.ib(default=None) -class OpenSearchAggregationExtensionPostRequest( +class EsAggregationExtensionPostRequest( AggregationExtensionPostRequest, FilterExtensionPostRequest ): """Add implementation specific query parameters to AggregationExtensionPostRequest for aggrgeation precision.""" @@ -79,31 +79,6 @@ class EsAsyncAggregationClient(AsyncBaseAggregationClient): "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, - { - "name": "sun_elevation_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric", - }, - { - "name": "platform_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string", - }, - { - "name": "sun_azimuth_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric", - }, - { - "name": "off_nadir_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric", - }, - { - "name": "cloud_cover_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric", - }, ] GEO_AGGREGATIONS = [ @@ -236,7 +211,7 @@ def metric_agg(self, es_aggs, name, data_type): async def aggregate( self, - aggregate_request: Optional[OpenSearchAggregationExtensionPostRequest] = None, + aggregate_request: Optional[EsAggregationExtensionPostRequest] = None, collections: Optional[List[str]] = [], datetime: Optional[DateTimeType] = None, intersects: Optional[str] = None, @@ -256,7 +231,6 @@ async def aggregate( request: Request = kwargs["request"] base_url = str(request.base_url) search = self.database.make_search() - if aggregate_request is None: # this is borrowed from stac-fastapi-pgstac # Kludgy fix because using factory does not allow alias for filter-lang @@ -271,7 +245,7 @@ async def aggregate( else: filter_lang = "cql2-text" - aggregate_request = OpenSearchAggregationExtensionGetRequest( + aggregate_request = EsAggregationExtensionGetRequest( collections=",".join(collections) if collections else None, datetime=datetime, intersects=intersects, diff --git a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py index 56a29c42..18ff0018 100644 --- a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py +++ b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py @@ -11,6 +11,11 @@ TransactionsClient, ) from stac_fastapi.core.extensions import QueryExtension +from stac_fastapi.core.extensions.aggregation import ( + EsAggregationExtensionGetRequest, + EsAggregationExtensionPostRequest, + EsAsyncAggregationClient, +) from stac_fastapi.core.extensions.fields import FieldsExtension from stac_fastapi.core.route_dependencies import get_route_dependencies from stac_fastapi.core.session import Session @@ -21,6 +26,7 @@ create_index_templates, ) from stac_fastapi.extensions.core import ( + AggregationExtension, FilterExtension, SortExtension, TokenPaginationExtension, @@ -38,7 +44,15 @@ database_logic = DatabaseLogic() -extensions = [ +aggregation_extension = AggregationExtension( + client=EsAsyncAggregationClient( + database=database_logic, session=session, settings=settings + ) +) +aggregation_extension.GET = EsAggregationExtensionGetRequest +aggregation_extension.POST = EsAggregationExtensionPostRequest + +search_extensions = [ TransactionExtension( client=TransactionsClient( database=database_logic, session=session, settings=settings @@ -59,9 +73,11 @@ filter_extension, ] +extensions = [aggregation_extension] + search_extensions + database_logic.extensions = [type(ext).__name__ for ext in extensions] -post_request_model = create_post_request_model(extensions) +post_request_model = create_post_request_model(search_extensions) api = StacApi( title=os.getenv("STAC_FASTAPI_TITLE", "stac-fastapi-elasticsearch"), @@ -72,7 +88,7 @@ client=CoreClient( database=database_logic, session=session, post_request_model=post_request_model ), - search_get_request_model=create_get_request_model(extensions), + search_get_request_model=create_get_request_model(search_extensions), search_post_request_model=post_request_model, route_dependencies=get_route_dependencies(), ) diff --git a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py index a4b40325..f2ec0134 100644 --- a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py +++ b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py @@ -633,6 +633,144 @@ async def execute_search( return items, matched, next_token + """ AGGREGATE LOGIC """ + + async def aggregate( + self, + collection_ids: Optional[List[str]], + aggregations: List[str], + search: Search, + centroid_geohash_grid_precision: int, + centroid_geohex_grid_precision: int, + centroid_geotile_grid_precision: int, + geometry_geohash_grid_precision: int, + # geometry_geohex_grid_precision: int, + geometry_geotile_grid_precision: int, + ignore_unavailable: Optional[bool] = True, + ): + """Return aggregations of STAC Items.""" + agg_2_es = { + "total_count": {"value_count": {"field": "id"}}, + "collection_frequency": {"terms": {"field": "collection", "size": 100}}, + "platform_frequency": { + "terms": {"field": "properties.platform", "size": 100} + }, + "cloud_cover_frequency": { + "range": { + "field": "properties.eo:cloud_cover", + "ranges": [ + {"to": 5}, + {"from": 5, "to": 15}, + {"from": 15, "to": 40}, + {"from": 40}, + ], + } + }, + "datetime_frequency": { + "date_histogram": { + "field": "properties.datetime", + "calendar_interval": "month", + } + }, + "datetime_min": {"min": {"field": "properties.datetime"}}, + "datetime_max": {"max": {"field": "properties.datetime"}}, + "grid_code_frequency": { + "terms": { + "field": "properties.grid:code", + "missing": "none", + "size": 10000, + } + }, + "sun_elevation_frequency": { + "histogram": {"field": "properties.view:sun_elevation", "interval": 5} + }, + "sun_azimuth_frequency": { + "histogram": {"field": "properties.view:sun_azimuth", "interval": 5} + }, + "off_nadir_frequency": { + "histogram": {"field": "properties.view:off_nadir", "interval": 5} + }, + } + + search_body: Dict[str, Any] = {} + query = search.query.to_dict() if search.query else None + if query: + search_body["query"] = query + + logger.debug("Aggregations: %s", aggregations) + + # include all aggregations specified + # this will ignore aggregations with the wrong names + search_body["aggregations"] = { + k: v for k, v in agg_2_es.items() if k in aggregations + } + + # centroid + if "centroid_geohash_grid_frequency" in aggregations: + search_body["aggregations"]["centroid_geohash_grid_frequency"] = { + "geohash_grid": { + "field": "properties.proj:centroid", + "precision": centroid_geohash_grid_precision, + } + } + + if "centroid_geohex_grid_frequency" in aggregations: + search_body["aggregations"]["centroid_geohex_grid_frequency"] = { + "geohex_grid": { + "field": "properties.proj:centroid", + "precision": centroid_geohex_grid_precision, + } + } + + if "centroid_geotile_grid_frequency" in aggregations: + search_body["aggregations"]["centroid_geotile_grid_frequency"] = { + "geotile_grid": { + "field": "properties.proj:centroid", + "precision": centroid_geotile_grid_precision, + } + } + + # geometry + if "geometry_geohash_grid_frequency" in aggregations: + search_body["aggregations"]["geometry_geohash_grid_frequency"] = { + "geohash_grid": { + "field": "geometry", + "precision": geometry_geohash_grid_precision, + } + } + + # if "geometry_geohex_grid_frequency" in aggregations: + # search_body["aggregations"]["geometry_geohex_grid_frequency"] = { + # "geohex_grid": { + # "field": "geometry", + # "precision": geometry_geohex_grid_precision, + # } + # } + + if "geometry_geotile_grid_frequency" in aggregations: + search_body["aggregations"]["geometry_geotile_grid_frequency"] = { + "geotile_grid": { + "field": "geometry", + "precision": geometry_geotile_grid_precision, + } + } + + index_param = indices(collection_ids) + search_task = asyncio.create_task( + self.client.search( + index=index_param, + ignore_unavailable=ignore_unavailable, + body=search_body, + ) + ) + + try: + db_response = await search_task + except exceptions.NotFoundError: + raise NotFoundError(f"Collections '{collection_ids}' do not exist") + + return db_response + """ TRANSACTION LOGIC """ async def check_collection_exists(self, collection_id: str): diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py index 00664388..e3028739 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py @@ -12,9 +12,9 @@ ) from stac_fastapi.core.extensions import QueryExtension from stac_fastapi.core.extensions.aggregation import ( + EsAggregationExtensionGetRequest, + EsAggregationExtensionPostRequest, EsAsyncAggregationClient, - OpenSearchAggregationExtensionGetRequest, - OpenSearchAggregationExtensionPostRequest, ) from stac_fastapi.core.extensions.fields import FieldsExtension from stac_fastapi.core.route_dependencies import get_route_dependencies @@ -49,8 +49,8 @@ database=database_logic, session=session, settings=settings ) ) -aggregation_extension.GET = OpenSearchAggregationExtensionGetRequest -aggregation_extension.POST = OpenSearchAggregationExtensionPostRequest +aggregation_extension.GET = EsAggregationExtensionGetRequest +aggregation_extension.POST = EsAggregationExtensionPostRequest search_extensions = [ TransactionExtension( diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py index 5b9b0875..49c9659d 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py @@ -681,7 +681,7 @@ async def aggregate( ignore_unavailable: Optional[bool] = True, ): """Return aggregations of STAC Items.""" - ALL_AGGREGATIONS = { + agg_2_es = { "total_count": {"value_count": {"field": "id"}}, "collection_frequency": {"terms": {"field": "collection", "size": 100}}, "platform_frequency": { @@ -729,12 +729,10 @@ async def aggregate( if query: search_body["query"] = query - logger.debug("Aggregations: %s", aggregations) - # include all aggregations specified # this will ignore aggregations with the wrong names search_body["aggregations"] = { - k: v for k, v in ALL_AGGREGATIONS.items() if k in aggregations + k: v for k, v in agg_2_es.items() if k in aggregations } # centroid diff --git a/stac_fastapi/tests/conftest.py b/stac_fastapi/tests/conftest.py index a132a77e..a093fd53 100644 --- a/stac_fastapi/tests/conftest.py +++ b/stac_fastapi/tests/conftest.py @@ -20,9 +20,9 @@ ) from stac_fastapi.core.extensions import QueryExtension from stac_fastapi.core.extensions.aggregation import ( + EsAggregationExtensionGetRequest, + EsAggregationExtensionPostRequest, EsAsyncAggregationClient, - OpenSearchAggregationExtensionGetRequest, - OpenSearchAggregationExtensionPostRequest, ) from stac_fastapi.core.route_dependencies import get_route_dependencies @@ -200,8 +200,8 @@ async def app(): database=database, session=None, settings=settings ) ) - aggregation_extension.GET = OpenSearchAggregationExtensionGetRequest - aggregation_extension.POST = OpenSearchAggregationExtensionPostRequest + aggregation_extension.GET = EsAggregationExtensionGetRequest + aggregation_extension.POST = EsAggregationExtensionPostRequest search_extensions = [ TransactionExtension( @@ -286,8 +286,8 @@ async def app_basic_auth(): database=database, session=None, settings=settings ) ) - aggregation_extension.GET = OpenSearchAggregationExtensionGetRequest - aggregation_extension.POST = OpenSearchAggregationExtensionPostRequest + aggregation_extension.GET = EsAggregationExtensionGetRequest + aggregation_extension.POST = EsAggregationExtensionPostRequest search_extensions = [ TransactionExtension( diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index b10b8349..56216069 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -43,7 +43,7 @@ async def test_get_catalog_aggregations(app_client): resp = await app_client.get("/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 10 + assert len(resp.json()["aggregations"]) == 5 @pytest.mark.asyncio @@ -52,7 +52,7 @@ async def test_post_catalog_aggregations(app_client): resp = await app_client.post("/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 10 + assert len(resp.json()["aggregations"]) == 5 @pytest.mark.asyncio @@ -729,6 +729,10 @@ async def test_post_aggregate_centroid_geohash_frequency(app_client, ctx): @pytest.mark.asyncio async def test_get_aggregate_centroid_geohex_frequency(app_client, ctx): + # geohex is only available on a commercial license of ES + if os.getenv("BACKEND", "elasticsearch").lower() == "elasticsearch": + pytest.skip() + resp = await app_client.get( "/aggregate?aggregations=centroid_geohex_grid_frequency¢roid_geohex_grid_frequency_precision=5&collections=test-collection" ) @@ -741,6 +745,10 @@ async def test_get_aggregate_centroid_geohex_frequency(app_client, ctx): @pytest.mark.asyncio async def test_post_aggregate_centroid_geohex_frequency(app_client, ctx): + # geohex is only available on a commercial license of ES + if os.getenv("BACKEND", "elasticsearch").lower() == "elasticsearch": + pytest.skip() + params = { "aggregations": ["centroid_geohex_grid_frequency"], "centroid_geohex_grid_frequency_precision": 5, @@ -785,6 +793,10 @@ async def test_post_aggregate_centroid_geotile_frequency(app_client, ctx): @pytest.mark.asyncio async def test_get_aggregate_geometry_geotile_frequency(app_client, ctx): + # geometry geo-aggregation is only available on a commercial license of ES + if os.getenv("BACKEND", "elasticsearch").lower() == "elasticsearch": + pytest.skip() + resp = await app_client.get( "/aggregate?aggregations=geometry_geotile_grid_frequency&geometry_geotile_grid_frequency_precision=5&collections=test-collection" ) @@ -797,6 +809,10 @@ async def test_get_aggregate_geometry_geotile_frequency(app_client, ctx): @pytest.mark.asyncio async def test_post_aggregate_geometry_geotile_frequency(app_client, ctx): + # geometry geo-aggregation is only available on a commercial license of ES + if os.getenv("BACKEND", "elasticsearch").lower() == "elasticsearch": + pytest.skip() + params = { "aggregations": ["geometry_geotile_grid_frequency"], "geometry_geotile_grid_frequency_precision": 5, @@ -813,6 +829,10 @@ async def test_post_aggregate_geometry_geotile_frequency(app_client, ctx): @pytest.mark.asyncio async def test_get_aggregate_geometry_geohash_frequency(app_client, ctx): + # geo-aggregation is only available on a commercial license of ES + if os.getenv("BACKEND", "elasticsearch").lower() == "elasticsearch": + pytest.skip() + resp = await app_client.get( "/aggregate?aggregations=geometry_geohash_grid_frequency&geometry_geohash_grid_frequency_precision=5&collections=test-collection" ) @@ -825,6 +845,10 @@ async def test_get_aggregate_geometry_geohash_frequency(app_client, ctx): @pytest.mark.asyncio async def test_post_aggregate_geometry_geohash_frequency(app_client, ctx): + # geo-aggregation is only available on a commercial license of ES + if os.getenv("BACKEND", "elasticsearch").lower() == "elasticsearch": + pytest.skip() + params = { "aggregations": ["geometry_geohash_grid_frequency"], "geometry_geohash_grid_frequency_precision": 5, From e45adc107bfd4ca90453b5b8dc20e5a444c42c20 Mon Sep 17 00:00:00 2001 From: James Date: Mon, 1 Jul 2024 01:35:25 -0400 Subject: [PATCH 09/18] remove test data copies --- stac_fastapi/tests/data/collection.json | 173 -------- stac_fastapi/tests/data/item.json | 515 ------------------------ 2 files changed, 688 deletions(-) delete mode 100644 stac_fastapi/tests/data/collection.json delete mode 100644 stac_fastapi/tests/data/item.json diff --git a/stac_fastapi/tests/data/collection.json b/stac_fastapi/tests/data/collection.json deleted file mode 100644 index 92fdd93e..00000000 --- a/stac_fastapi/tests/data/collection.json +++ /dev/null @@ -1,173 +0,0 @@ -{ - "id": "test-collection", - "stac_extensions": ["https://stac-extensions.github.io/eo/v1.0.0/schema.json"], - "type": "Collection", - "description": "Landat 8 imagery radiometrically calibrated and orthorectified using gound points and Digital Elevation Model (DEM) data to correct relief displacement.", - "stac_version": "1.0.0", - "license": "PDDL-1.0", - "summaries": { - "platform": ["landsat-8"], - "instruments": ["oli", "tirs"], - "gsd": [30] - }, - "extent": { - "spatial": { - "bbox": [ - [ - -180.0, - -90.0, - 180.0, - 90.0 - ] - ] - }, - "temporal": { - "interval": [ - [ - "2013-06-01", - null - ] - ] - } - }, - "aggregations": [ - { - "name": "total_count", - "data_type": "integer" - }, - { - "name": "datetime_max", - "data_type": "datetime" - }, - { - "name": "datetime_min", - "data_type": "datetime" - }, - { - "name": "datetime_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "datetime" - }, - { - "name": "sun_elevation_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric" - }, - { - "name": "platform_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" - }, - { - "name": "sun_azimuth_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric" - }, - { - "name": "off_nadir_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric" - }, - { - "name": "cloud_cover_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric" - }, - { - "name": "grid_code_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" - }, - { - "name": "centroid_geohash_grid_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" - }, - { - "name": "centroid_geohex_grid_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" - }, - { - "name": "centroid_geotile_grid_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" - }, - { - "name": "geometry_geohash_grid_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "numeric" - }, - { - "name": "geometry_geotile_grid_frequency", - "data_type": "frequency_distribution", - "frequency_distribution_data_type": "string" - } - ], - "links": [ - { - "href": "http://localhost:8081/collections/landsat-8-l1", - "rel": "self", - "type": "application/json" - }, - { - "href": "http://localhost:8081/", - "rel": "parent", - "type": "application/json" - }, - { - "href": "http://localhost:8081/collections/landsat-8-l1/items", - "rel": "item", - "type": "application/geo+json" - }, - { - "href": "http://localhost:8081/", - "rel": "root", - "type": "application/json" - } - ], - "title": "Landsat 8 L1", - "keywords": [ - "landsat", - "earth observation", - "usgs" - ], - "providers": [ - { - "name": "USGS", - "roles": [ - "producer" - ], - "url": "https://landsat.usgs.gov/" - }, - { - "name": "Planet Labs", - "roles": [ - "processor" - ], - "url": "https://github.com/landsat-pds/landsat_ingestor" - }, - { - "name": "AWS", - "roles": [ - "host" - ], - "url": "https://landsatonaws.com/" - }, - { - "name": "Development Seed", - "roles": [ - "processor" - ], - "url": "https://github.com/sat-utils/sat-api" - }, - { - "name": "Earth Search by Element84", - "description": "API of Earth on AWS datasets", - "roles": [ - "host" - ], - "url": "https://element84.com" - } - ] -} \ No newline at end of file diff --git a/stac_fastapi/tests/data/item.json b/stac_fastapi/tests/data/item.json deleted file mode 100644 index b797db98..00000000 --- a/stac_fastapi/tests/data/item.json +++ /dev/null @@ -1,515 +0,0 @@ -{ - "type": "FeatureCollection", - "features": [ - { - "type": "Feature", - "id": "test-item", - "stac_version": "1.0.0", - "stac_extensions": [ - "https://stac-extensions.github.io/eo/v1.0.0/schema.json", - "https://stac-extensions.github.io/projection/v1.0.0/schema.json" - ], - "geometry": { - "coordinates": [ - [ - [ - 152.15052873427666, - -33.82243006904891 - ], - [ - 150.1000346138806, - -34.257132625788756 - ], - [ - 149.5776607193635, - -32.514709769700254 - ], - [ - 151.6262528041627, - -32.08081674221862 - ], - [ - 152.15052873427666, - -33.82243006904891 - ] - ] - ], - "type": "Polygon" - }, - "properties": { - "datetime": "2020-02-12T12:30:22Z", - "landsat:scene_id": "LC82081612020043LGN00", - "landsat:row": "161", - "gsd": 15, - "eo:bands": [ - { - "gsd": 30, - "name": "B1", - "common_name": "coastal", - "center_wavelength": 0.44, - "full_width_half_max": 0.02 - }, - { - "gsd": 30, - "name": "B2", - "common_name": "blue", - "center_wavelength": 0.48, - "full_width_half_max": 0.06 - }, - { - "gsd": 30, - "name": "B3", - "common_name": "green", - "center_wavelength": 0.56, - "full_width_half_max": 0.06 - }, - { - "gsd": 30, - "name": "B4", - "common_name": "red", - "center_wavelength": 0.65, - "full_width_half_max": 0.04 - }, - { - "gsd": 30, - "name": "B5", - "common_name": "nir", - "center_wavelength": 0.86, - "full_width_half_max": 0.03 - }, - { - "gsd": 30, - "name": "B6", - "common_name": "swir16", - "center_wavelength": 1.6, - "full_width_half_max": 0.08 - }, - { - "gsd": 30, - "name": "B7", - "common_name": "swir22", - "center_wavelength": 2.2, - "full_width_half_max": 0.2 - }, - { - "gsd": 15, - "name": "B8", - "common_name": "pan", - "center_wavelength": 0.59, - "full_width_half_max": 0.18 - }, - { - "gsd": 30, - "name": "B9", - "common_name": "cirrus", - "center_wavelength": 1.37, - "full_width_half_max": 0.02 - }, - { - "gsd": 100, - "name": "B10", - "common_name": "lwir11", - "center_wavelength": 10.9, - "full_width_half_max": 0.8 - }, - { - "gsd": 100, - "name": "B11", - "common_name": "lwir12", - "center_wavelength": 12, - "full_width_half_max": 1 - } - ], - "landsat:revision": "00", - "view:sun_azimuth": -148.83296771, - "instrument": "OLI_TIRS", - "landsat:product_id": "LC08_L1GT_208161_20200212_20200212_01_RT", - "eo:cloud_cover": 0, - "landsat:tier": "RT", - "landsat:processing_level": "L1GT", - "landsat:column": "208", - "platform": "landsat-8", - "proj:epsg": 32756, - "view:sun_elevation": -37.30791534, - "view:off_nadir": 0, - "height": 2500, - "width": 2500, - "proj:centroid": { - "lat": -33.168923093262876, - "lon": 150.86362466374058 - }, - "grid:code": "MGRS-56HLJ" - }, - "bbox": [ - 149.57574, - -34.25796, - 152.15194, - -32.07915 - ], - "collection": "test-collection", - "assets": { - "ANG": { - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ANG.txt", - "type": "text/plain", - "title": "Angle Coefficients File", - "description": "Collection 2 Level-1 Angle Coefficients File (ANG)" - }, - "SR_B1": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B1.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Coastal/Aerosol Band (B1)", - "eo:bands": [ - { - "gsd": 30, - "name": "SR_B1", - "common_name": "coastal", - "center_wavelength": 0.44, - "full_width_half_max": 0.02 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Coastal/Aerosol Band (B1) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B2": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B2.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Blue Band (B2)", - "eo:bands": [ - { - "gsd": 30, - "name": "SR_B2", - "common_name": "blue", - "center_wavelength": 0.48, - "full_width_half_max": 0.06 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Blue Band (B2) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B3": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B3.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Green Band (B3)", - "eo:bands": [ - { - "gsd": 30, - "name": "SR_B3", - "common_name": "green", - "center_wavelength": 0.56, - "full_width_half_max": 0.06 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Green Band (B3) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B4": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B4.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Red Band (B4)", - "eo:bands": [ - { - "gsd": 30, - "name": "SR_B4", - "common_name": "red", - "center_wavelength": 0.65, - "full_width_half_max": 0.04 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Red Band (B4) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B5": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B5.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Near Infrared Band 0.8 (B5)", - "eo:bands": [ - { - "gsd": 30, - "name": "SR_B5", - "common_name": "nir08", - "center_wavelength": 0.86, - "full_width_half_max": 0.03 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Near Infrared Band 0.8 (B5) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B6": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B6.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Short-wave Infrared Band 1.6 (B6)", - "eo:bands": [ - { - "gsd": 30, - "name": "SR_B6", - "common_name": "swir16", - "center_wavelength": 1.6, - "full_width_half_max": 0.08 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Short-wave Infrared Band 1.6 (B6) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "SR_B7": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_SR_B7.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Short-wave Infrared Band 2.2 (B7)", - "eo:bands": [ - { - "gsd": 30, - "name": "SR_B7", - "common_name": "swir22", - "center_wavelength": 2.2, - "full_width_half_max": 0.2 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Collection 2 Level-2 Short-wave Infrared Band 2.2 (B7) Surface Reflectance", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_QA": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_QA.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Surface Temperature Quality Assessment Band", - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Surface Temperature Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_B10": { - "gsd": 100, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_B10.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Surface Temperature Band (B10)", - "eo:bands": [ - { - "gsd": 100, - "name": "ST_B10", - "common_name": "lwir11", - "center_wavelength": 10.9, - "full_width_half_max": 0.8 - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Surface Temperature Band (B10) Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "MTL.txt": { - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.txt", - "type": "text/plain", - "title": "Product Metadata File", - "description": "Collection 2 Level-1 Product Metadata File (MTL)" - }, - "MTL.xml": { - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_MTL.xml", - "type": "application/xml", - "title": "Product Metadata File (xml)", - "description": "Collection 2 Level-1 Product Metadata File (xml)" - }, - "ST_DRAD": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_DRAD.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Downwelled Radiance Band", - "eo:bands": [ - { - "gsd": 30, - "name": "ST_DRAD", - "description": "downwelled radiance" - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Downwelled Radiance Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_EMIS": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMIS.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Emissivity Band", - "eo:bands": [ - { - "gsd": 30, - "name": "ST_EMIS", - "description": "emissivity" - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Emissivity Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - }, - "ST_EMSD": { - "gsd": 30, - "href": "https://landsateuwest.blob.core.windows.net/landsat-c2/level-2/standard/oli-tirs/2021/108/066/LC08_L2SP_108066_20210712_20210720_02_T1/LC08_L2SP_108066_20210712_20210720_02_T1_ST_EMSD.TIF", - "type": "image/tiff; application=geotiff; profile=cloud-optimized", - "title": "Emissivity Standard Deviation Band", - "eo:bands": [ - { - "gsd": 30, - "name": "ST_EMSD", - "description": "emissivity standard deviation" - } - ], - "proj:shape": [ - 7731, - 7591 - ], - "description": "Landsat Collection 2 Level-2 Emissivity Standard Deviation Band Surface Temperature Product", - "proj:transform": [ - 30, - 0, - 304185, - 0, - -30, - -843585 - ] - } - }, - "links": [ - { - "href": "http://localhost:8081/collections/landsat-8-l1/items/LC82081612020043", - "rel": "self", - "type": "application/geo+json" - }, - { - "href": "http://localhost:8081/collections/landsat-8-l1", - "rel": "parent", - "type": "application/json" - }, - { - "href": "http://localhost:8081/collections/landsat-8-l1", - "rel": "collection", - "type": "application/json" - }, - { - "href": "http://localhost:8081/", - "rel": "root", - "type": "application/json" - } - ] - } - ] -} \ No newline at end of file From 3446ce7e469b6824e4723214be418ee21900f2dc Mon Sep 17 00:00:00 2001 From: James Date: Tue, 2 Jul 2024 06:11:45 -0400 Subject: [PATCH 10/18] ingore typing bug on inherited fields --- .../stac_fastapi/core/extensions/aggregation.py | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index 0b4d66ed..f00861e4 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -246,13 +246,13 @@ async def aggregate( filter_lang = "cql2-text" aggregate_request = EsAggregationExtensionGetRequest( - collections=",".join(collections) if collections else None, - datetime=datetime, - intersects=intersects, - filter=filter, - aggregations=",".join(aggregations) if aggregations else None, - ids=ids, - bbox=bbox, + collections=",".join(collections) if collections else None, # type: ignore [call-arg] + datetime=datetime, # type: ignore [call-arg] + intersects=intersects, # type: ignore [call-arg] + filter=filter, # type: ignore [call-arg] + aggregations=",".join(aggregations) if aggregations else None, # type: ignore [call-arg] + ids=ids, # type: ignore [call-arg] + bbox=bbox, # type: ignore [call-arg] centroid_geohash_grid_frequency_precision=centroid_geohash_grid_frequency_precision, centroid_geohex_grid_frequency_precision=centroid_geohex_grid_frequency_precision, centroid_geotile_grid_frequency_precision=centroid_geotile_grid_frequency_precision, From f96e3e941aeacf49be26a91c53450d7772a44a33 Mon Sep 17 00:00:00 2001 From: James Date: Sun, 7 Jul 2024 01:00:16 -0400 Subject: [PATCH 11/18] support for GET and POST --- .../core/extensions/aggregation.py | 181 +++++++++++++----- .../stac_fastapi/elasticsearch/app.py | 2 +- .../opensearch/stac_fastapi/opensearch/app.py | 2 +- stac_fastapi/tests/conftest.py | 4 +- .../tests/extensions/test_aggregation.py | 38 +++- 5 files changed, 168 insertions(+), 59 deletions(-) diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index f00861e4..279f470b 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -1,6 +1,7 @@ """Request model for the Aggregation extension.""" import re +from datetime import datetime as datetime_type from typing import Dict, List, Literal, Optional, Union from urllib.parse import unquote_plus, urljoin @@ -79,41 +80,41 @@ class EsAsyncAggregationClient(AsyncBaseAggregationClient): "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, - ] - - GEO_AGGREGATIONS = [ { - "name": "grid_code_frequency", + "name": "geometry_geohash_grid_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, + # { + # "name": "geometry_geohex_grid_frequency", + # "data_type": "frequency_distribution", + # "frequency_distribution_data_type": "string", + # }, { - "name": "centroid_geohash_grid_frequency", + "name": "geometry_geotile_grid_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, + ] + + GEO_POINT_AGGREGATIONS = [ { - "name": "centroid_geohex_grid_frequency", + "name": "grid_code_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, { - "name": "centroid_geotile_grid_frequency", + "name": "centroid_geohash_grid_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, { - "name": "geometry_geohash_grid_frequency", + "name": "centroid_geohex_grid_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, - # { - # "name": "geometry_geohex_grid_frequency", - # "data_type": "frequency_distribution", - # "frequency_distribution_data_type": "string", - # }, { - "name": "geometry_geotile_grid_frequency", + "name": "centroid_geotile_grid_frequency", "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, @@ -181,6 +182,58 @@ def extract_precision( else: return min_value + @staticmethod + def _return_date( + interval: Optional[Union[DateTimeType, str]] + ) -> Dict[str, Optional[str]]: + """ + Convert a date interval. + + (which may be a datetime, a tuple of one or two datetimes a string + representing a datetime or range, or None) into a dictionary for filtering + search results with Elasticsearch. + + This function ensures the output dictionary contains 'gte' and 'lte' keys, + even if they are set to None, to prevent KeyError in the consuming logic. + + Args: + interval (Optional[Union[DateTimeType, str]]): The date interval, which might be a single datetime, + a tuple with one or two datetimes, a string, or None. + + Returns: + dict: A dictionary representing the date interval for use in filtering search results, + always containing 'gte' and 'lte' keys. + """ + result: Dict[str, Optional[str]] = {"gte": None, "lte": None} + + if interval is None: + return result + + if isinstance(interval, str): + if "/" in interval: + parts = interval.split("/") + result["gte"] = parts[0] if parts[0] != ".." else None + result["lte"] = ( + parts[1] if len(parts) > 1 and parts[1] != ".." else None + ) + else: + converted_time = interval if interval != ".." else None + result["gte"] = result["lte"] = converted_time + return result + + if isinstance(interval, datetime_type): + datetime_iso = interval.isoformat() + result["gte"] = result["lte"] = datetime_iso + elif isinstance(interval, tuple): + start, end = interval + # Ensure datetimes are converted to UTC and formatted with 'Z' + if start: + result["gte"] = start.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3] + "Z" + if end: + result["lte"] = end.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3] + "Z" + + return result + def frequency_agg(self, es_aggs, name, data_type): """Format an aggregation for a frequency distribution aggregation.""" buckets = [] @@ -209,6 +262,39 @@ def metric_agg(self, es_aggs, name, data_type): or es_aggs.get(name, {}).get("value"), ) + def get_filter(self, filter, filter_lang): + """Format the filter parameter in cql2-json or cql2-text""" + if filter_lang == "cql2-text": + return orjson.loads(unquote_plus(to_cql2(parse_cql2_text(filter)))) + elif filter_lang == "cql2-json": + if isinstance(filter, str): + return orjson.loads(unquote_plus(filter)) + else: + return filter + else: + raise HTTPException( + status_code=400, + detail=f"Unknown filter-lang: {filter_lang}. Only cql2-json or cql2-text are supported.", + ) + + def _format_datetime_range(self, date_tuple: DateTimeType) -> str: + """ + Convert a tuple of datetime objects or None into a formatted string for API requests. + + Args: + date_tuple (tuple): A tuple containing two elements, each can be a datetime object or None. + + Returns: + str: A string formatted as 'YYYY-MM-DDTHH:MM:SS.sssZ/YYYY-MM-DDTHH:MM:SS.sssZ', with '..' used if any element is None. + """ + + def format_datetime(dt): + """Format a single datetime object to the ISO8601 extended format with 'Z'.""" + return dt.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3] + "Z" if dt else ".." + + start, end = date_tuple + return f"{format_datetime(start)}/{format_datetime(end)}" + async def aggregate( self, aggregate_request: Optional[EsAggregationExtensionPostRequest] = None, @@ -231,7 +317,26 @@ async def aggregate( request: Request = kwargs["request"] base_url = str(request.base_url) search = self.database.make_search() + if aggregate_request is None: + base_args = { + "collections": collections, + "ids": ids, + "bbox": bbox, + "aggregations": aggregations, + "centroid_geohash_grid_frequency_precision": centroid_geohash_grid_frequency_precision, + "centroid_geohex_grid_frequency_precision": centroid_geohex_grid_frequency_precision, + "centroid_geotile_grid_frequency_precision": centroid_geotile_grid_frequency_precision, + "geometry_geohash_grid_frequency_precision": geometry_geohash_grid_frequency_precision, + "geometry_geotile_grid_frequency_precision": geometry_geotile_grid_frequency_precision, + } + + if intersects: + base_args["intersects"] = orjson.loads(unquote_plus(intersects)) + + if datetime: + base_args["datetime"] = self._format_datetime_range(datetime) + # this is borrowed from stac-fastapi-pgstac # Kludgy fix because using factory does not allow alias for filter-lang # If the value is the default, check if the request is different. @@ -245,22 +350,17 @@ async def aggregate( else: filter_lang = "cql2-text" - aggregate_request = EsAggregationExtensionGetRequest( - collections=",".join(collections) if collections else None, # type: ignore [call-arg] - datetime=datetime, # type: ignore [call-arg] - intersects=intersects, # type: ignore [call-arg] - filter=filter, # type: ignore [call-arg] - aggregations=",".join(aggregations) if aggregations else None, # type: ignore [call-arg] - ids=ids, # type: ignore [call-arg] - bbox=bbox, # type: ignore [call-arg] - centroid_geohash_grid_frequency_precision=centroid_geohash_grid_frequency_precision, - centroid_geohex_grid_frequency_precision=centroid_geohex_grid_frequency_precision, - centroid_geotile_grid_frequency_precision=centroid_geotile_grid_frequency_precision, - geometry_geohash_grid_frequency_precision=geometry_geohash_grid_frequency_precision, - geometry_geotile_grid_frequency_precision=geometry_geotile_grid_frequency_precision, - ) + if filter: + base_args["filter"] = self.get_filter(filter, filter_lang) + + aggregate_request = EsAggregationExtensionPostRequest(**base_args) else: filter_lang = "cql2-json" + if aggregate_request.filter: + aggregate_request.filter = self.get_filter( + aggregate_request.filter, filter_lang + ) + if ( aggregate_request.aggregations is None or aggregate_request.aggregations == [] @@ -305,7 +405,6 @@ async def aggregate( supported_aggregations = ( aggs["aggregations"] + self.DEFAULT_AGGREGATIONS ) - # supported_aggregations = set([x["name"] for x in aggs["aggregations"]] + [x["name"] for x in self.DEFAULT_AGGREGATIONS]) for agg_name in aggregate_request.aggregations: if agg_name not in set([x["name"] for x in supported_aggregations]): @@ -323,29 +422,13 @@ async def aggregate( status_code=400, detail=f"Aggregation {agg_name} not supported at catalog level", ) - - if aggregate_request.filter: - if filter_lang == "cql2-text": - aggregate_request.filter = orjson.loads( - unquote_plus(to_cql2(parse_cql2_text(aggregate_request.filter))) - ) - elif filter_lang == "cql2-json": - if isinstance(aggregate_request.filter, str): - aggregate_request.filter = orjson.loads( - unquote_plus(aggregate_request.filter) - ) - else: - raise HTTPException( - status_code=400, - detail=f"Unknown filter-lang: {aggregate_request.filter_lang}. Filter-lang or cql2-json and cql2-text are supported.", - ) try: search = self.database.apply_cql2_filter( search, aggregate_request.filter ) except Exception as e: raise HTTPException( - status_code=400, detail=f"Error with cql2_json filter: {e}" + status_code=400, detail=f"Error with cql2 filter: {e}" ) centroid_geohash_grid_precision = self.extract_precision( @@ -373,7 +456,9 @@ async def aggregate( ) # geometry_geohex_grid_frequency_precision = self.extract_precision( - # aggregate_request.geometry_geohex_grid_frequency_precision, 0, self.MAX_GEOHASH_PRECISION + # aggregate_request.geometry_geohex_grid_frequency_precision, + # 0, + # self.MAX_GEOHEX_PRECISION # ) geometry_geotile_grid_precision = self.extract_precision( @@ -401,7 +486,7 @@ async def aggregate( if db_response: result_aggs = db_response.get("aggregations", {}) - for agg in supported_aggregations + self.GEO_AGGREGATIONS: + for agg in supported_aggregations + self.GEO_POINT_AGGREGATIONS: if agg["name"] in aggregate_request.aggregations: if agg["name"].endswith("_frequency"): aggs.append( diff --git a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py index 18ff0018..5c1a83f4 100644 --- a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py +++ b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/app.py @@ -49,8 +49,8 @@ database=database_logic, session=session, settings=settings ) ) -aggregation_extension.GET = EsAggregationExtensionGetRequest aggregation_extension.POST = EsAggregationExtensionPostRequest +aggregation_extension.GET = EsAggregationExtensionGetRequest search_extensions = [ TransactionExtension( diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py index e3028739..186a85ab 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/app.py @@ -49,8 +49,8 @@ database=database_logic, session=session, settings=settings ) ) -aggregation_extension.GET = EsAggregationExtensionGetRequest aggregation_extension.POST = EsAggregationExtensionPostRequest +aggregation_extension.GET = EsAggregationExtensionGetRequest search_extensions = [ TransactionExtension( diff --git a/stac_fastapi/tests/conftest.py b/stac_fastapi/tests/conftest.py index a093fd53..dde9375e 100644 --- a/stac_fastapi/tests/conftest.py +++ b/stac_fastapi/tests/conftest.py @@ -200,8 +200,8 @@ async def app(): database=database, session=None, settings=settings ) ) - aggregation_extension.GET = EsAggregationExtensionGetRequest aggregation_extension.POST = EsAggregationExtensionPostRequest + aggregation_extension.GET = EsAggregationExtensionGetRequest search_extensions = [ TransactionExtension( @@ -286,8 +286,8 @@ async def app_basic_auth(): database=database, session=None, settings=settings ) ) - aggregation_extension.GET = EsAggregationExtensionGetRequest aggregation_extension.POST = EsAggregationExtensionPostRequest + aggregation_extension.GET = EsAggregationExtensionGetRequest search_extensions = [ TransactionExtension( diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index 56216069..b1d59b7e 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -43,7 +43,7 @@ async def test_get_catalog_aggregations(app_client): resp = await app_client.get("/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 5 + assert len(resp.json()["aggregations"]) == 7 @pytest.mark.asyncio @@ -52,7 +52,7 @@ async def test_post_catalog_aggregations(app_client): resp = await app_client.post("/aggregations") assert resp.status_code == 200 - assert len(resp.json()["aggregations"]) == 5 + assert len(resp.json()["aggregations"]) == 7 @pytest.mark.asyncio @@ -92,12 +92,19 @@ async def test_post_collection_aggregations(app_client, ctx, load_test_data): @pytest.mark.asyncio -async def test_aggregate_filter_extension_eq_get(app_client, ctx): - resp = await app_client.get( - '/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"=","args":[{"property":"id"},"test-item"]}' - ) +async def test_aggregate_search_point_does_not_intersect(app_client, ctx): + point = [15.04, -3.14] + intersects = {"type": "Point", "coordinates": point} + + params = { + "intersects": intersects, + "collections": [ctx.item["collection"]], + "aggregations": ["total_count"], + } + resp = await app_client.post("/aggregate", json=params) + assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 1 + assert resp.json()["aggregations"][0]["value"] == 0 @pytest.mark.asyncio @@ -471,6 +478,23 @@ async def test_aggregate_filter_extension_in_no_list(app_client, ctx): } +@pytest.mark.asyncio +async def test_aggrgeate_datetime_non_interval(app_client, ctx): + dt_formats = [ + "2020-02-12T12:30:22+00:00", + "2020-02-12T12:30:22.00Z", + "2020-02-12T12:30:22Z", + "2020-02-12T12:30:22.00+00:00", + ] + + for dt in dt_formats: + params = {"datetime": dt, "aggregations": ["total_count"]} + + resp = await app_client.post("/aggregate", json=params) + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 1 + + @pytest.mark.asyncio async def test_aggregate_filter_extension_between(app_client, ctx): sun_elevation = ctx.item["properties"]["view:sun_elevation"] From 4a98f1475ff6270fe7f4cc8252fb4b0ea624a386 Mon Sep 17 00:00:00 2001 From: James Date: Sun, 7 Jul 2024 17:14:40 -0400 Subject: [PATCH 12/18] linting --- stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py | 2 +- stac_fastapi/tests/extensions/test_aggregation.py | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index 279f470b..0cdfd507 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -263,7 +263,7 @@ def metric_agg(self, es_aggs, name, data_type): ) def get_filter(self, filter, filter_lang): - """Format the filter parameter in cql2-json or cql2-text""" + """Format the filter parameter in cql2-json or cql2-text.""" if filter_lang == "cql2-text": return orjson.loads(unquote_plus(to_cql2(parse_cql2_text(filter)))) elif filter_lang == "cql2-json": diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index b1d59b7e..6ef602bc 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -474,7 +474,7 @@ async def test_aggregate_filter_extension_in_no_list(app_client, ctx): assert resp.status_code == 400 assert resp.json() == { - "detail": f"Error with cql2_json filter: Arg {product_id} is not a list" + "detail": f"Error with cql2 filter: Arg {product_id} is not a list" } From ae757c21e312ddb595c224c3d5c5e874d5df8d18 Mon Sep 17 00:00:00 2001 From: James Date: Mon, 8 Jul 2024 23:00:37 -0400 Subject: [PATCH 13/18] datetime metric --- .../stac_fastapi/core/extensions/aggregation.py | 14 ++++++++++++-- 1 file changed, 12 insertions(+), 2 deletions(-) diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index 0cdfd507..403ddceb 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -1,6 +1,7 @@ """Request model for the Aggregation extension.""" import re +from datetime import datetime from datetime import datetime as datetime_type from typing import Dict, List, Literal, Optional, Union from urllib.parse import unquote_plus, urljoin @@ -14,6 +15,7 @@ from stac_fastapi.core.base_database_logic import BaseDatabaseLogic from stac_fastapi.core.base_settings import ApiBaseSettings +from stac_fastapi.core.datetime_utils import datetime_to_str from stac_fastapi.core.session import Session from stac_fastapi.extensions.core.aggregation.client import AsyncBaseAggregationClient from stac_fastapi.extensions.core.aggregation.request import ( @@ -255,11 +257,18 @@ def frequency_agg(self, es_aggs, name, data_type): def metric_agg(self, es_aggs, name, data_type): """Format an aggregation for a metric aggregation.""" + if name == "datetime_min" or name == "datetime_max": + value = datetime_to_str( + datetime.fromtimestamp(es_aggs.get(name, {}).get("value") / 1e3) + ) + else: + value = es_aggs.get(name, {}).get("value_as_string") or es_aggs.get( + name, {} + ).get("value") return Aggregation( name=name, data_type=data_type, - value=es_aggs.get(name, {}).get("value_as_string") - or es_aggs.get(name, {}).get("value"), + value=value, ) def get_filter(self, filter, filter_lang): @@ -297,6 +306,7 @@ def format_datetime(dt): async def aggregate( self, + # collection_id: Optional[str] = None, aggregate_request: Optional[EsAggregationExtensionPostRequest] = None, collections: Optional[List[str]] = [], datetime: Optional[DateTimeType] = None, From 1dcc41a1360c7c8db577575f445b42850de610bc Mon Sep 17 00:00:00 2001 From: James Date: Mon, 8 Jul 2024 23:28:29 -0400 Subject: [PATCH 14/18] allow zeros in test --- .../tests/extensions/test_aggregation.py | 20 +++++++++++++++---- 1 file changed, 16 insertions(+), 4 deletions(-) diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index 6ef602bc..99fc1a8c 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -554,7 +554,10 @@ async def test_get_aggregate_datetime_max(app_client, ctx): resp = await app_client.get("/aggregate?aggregations=datetime_max") assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + assert ( + resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + or resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22Z" + ) @pytest.mark.asyncio @@ -567,7 +570,10 @@ async def test_post_aggregate_datetime_max(app_client, ctx): resp = await app_client.post("/aggregate", json=params) assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + assert ( + resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + or resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22Z" + ) @pytest.mark.asyncio @@ -576,7 +582,10 @@ async def test_get_aggregate_datetime_min(app_client, ctx): resp = await app_client.get("/aggregate?aggregations=datetime_min") assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + assert ( + resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + or resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22Z" + ) @pytest.mark.asyncio @@ -589,7 +598,10 @@ async def test_post_aggregate_datetime_min(app_client, ctx): resp = await app_client.post("/aggregate", json=params) assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + assert ( + resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22.000Z" + or resp.json()["aggregations"][0]["value"] == "2020-02-12T12:30:22Z" + ) @pytest.mark.asyncio From 38dd41c5d79d8f42654731d03782f5bffea8b5fc Mon Sep 17 00:00:00 2001 From: James Date: Tue, 9 Jul 2024 18:10:13 -0400 Subject: [PATCH 15/18] collection aggregation, removed redundant filter tests --- .../core/extensions/aggregation.py | 99 ++++--- .../tests/extensions/test_aggregation.py | 250 ++++-------------- 2 files changed, 122 insertions(+), 227 deletions(-) diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index 403ddceb..fc8a1379 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -8,10 +8,11 @@ import attr import orjson -from fastapi import HTTPException, Request +from fastapi import HTTPException, Path, Request from pygeofilter.backends.cql2_json import to_cql2 from pygeofilter.parsers.cql2_text import parse as parse_cql2_text from stac_pydantic.shared import BBox +from typing_extensions import Annotated from stac_fastapi.core.base_database_logic import BaseDatabaseLogic from stac_fastapi.core.base_settings import ApiBaseSettings @@ -39,7 +40,11 @@ class EsAggregationExtensionGetRequest( AggregationExtensionGetRequest, FilterExtensionGetRequest ): - """Add implementation specific query parameters to AggregationExtensionGetRequest for aggrgeation precision.""" + """Implementation specific query parameters for aggregation precision.""" + + collection_id: Optional[ + Annotated[str, Path(description="Collection ID")] + ] = attr.ib(default=None) centroid_geohash_grid_frequency_precision: Optional[int] = attr.ib(default=None) centroid_geohex_grid_frequency_precision: Optional[int] = attr.ib(default=None) @@ -51,7 +56,7 @@ class EsAggregationExtensionGetRequest( class EsAggregationExtensionPostRequest( AggregationExtensionPostRequest, FilterExtensionPostRequest ): - """Add implementation specific query parameters to AggregationExtensionPostRequest for aggrgeation precision.""" + """Implementation specific query parameters for aggregation precision.""" centroid_geohash_grid_frequency_precision: Optional[int] = None centroid_geohex_grid_frequency_precision: Optional[int] = None @@ -130,7 +135,6 @@ async def get_aggregations(self, collection_id: Optional[str] = None, **kwargs): """Get the available aggregations for a catalog or collection defined in the STAC JSON. If no aggregations, default aggregations are used.""" request: Request = kwargs["request"] base_url = str(request.base_url) - links = [{"rel": "root", "type": "application/json", "href": base_url}] if collection_id is not None: @@ -149,13 +153,13 @@ async def get_aggregations(self, collection_id: Optional[str] = None, **kwargs): }, ] ) - if self.database.check_collection_exists(collection_id): + if await self.database.check_collection_exists(collection_id) is None: collection = await self.database.find_collection(collection_id) aggregations = collection.get( "aggregations", self.DEFAULT_AGGREGATIONS.copy() ) else: - raise IndexError("Collection does not exist") + raise IndexError(f"Collection {collection_id} does not exist") else: links.append( { @@ -257,14 +261,12 @@ def frequency_agg(self, es_aggs, name, data_type): def metric_agg(self, es_aggs, name, data_type): """Format an aggregation for a metric aggregation.""" - if name == "datetime_min" or name == "datetime_max": - value = datetime_to_str( - datetime.fromtimestamp(es_aggs.get(name, {}).get("value") / 1e3) - ) - else: - value = es_aggs.get(name, {}).get("value_as_string") or es_aggs.get( - name, {} - ).get("value") + value = es_aggs.get(name, {}).get("value_as_string") or es_aggs.get( + name, {} + ).get("value") + # ES 7.x does not return datetimes with a 'value_as_string' field + if "datetime" in name and isinstance(value, float): + value = datetime_to_str(datetime.fromtimestamp(value / 1e3)) return Aggregation( name=name, data_type=data_type, @@ -306,8 +308,10 @@ def format_datetime(dt): async def aggregate( self, - # collection_id: Optional[str] = None, aggregate_request: Optional[EsAggregationExtensionPostRequest] = None, + collection_id: Optional[ + Annotated[str, Path(description="Collection ID")] + ] = None, collections: Optional[List[str]] = [], datetime: Optional[DateTimeType] = None, intersects: Optional[str] = None, @@ -326,9 +330,11 @@ async def aggregate( """Get aggregations from the database.""" request: Request = kwargs["request"] base_url = str(request.base_url) + path = request.url.path search = self.database.make_search() if aggregate_request is None: + base_args = { "collections": collections, "ids": ids, @@ -341,6 +347,9 @@ async def aggregate( "geometry_geotile_grid_frequency_precision": geometry_geotile_grid_frequency_precision, } + if collection_id: + collections = [str(collection_id)] + if intersects: base_args["intersects"] = orjson.loads(unquote_plus(intersects)) @@ -359,18 +368,29 @@ async def aggregate( filter_lang = match.group(1) else: filter_lang = "cql2-text" - if filter: base_args["filter"] = self.get_filter(filter, filter_lang) - aggregate_request = EsAggregationExtensionPostRequest(**base_args) else: + # Workaround for optional path param in POST requests + if "collections" in path: + collection_id = path.split("/")[2] + filter_lang = "cql2-json" if aggregate_request.filter: aggregate_request.filter = self.get_filter( aggregate_request.filter, filter_lang ) + if collection_id: + if aggregate_request.collections: + raise HTTPException( + status_code=400, + detail="Cannot query multiple collections when executing '/collections//aggregate'. Use '/aggregate' and the collections field instead", + ) + else: + aggregate_request.collections = [collection_id] + if ( aggregate_request.aggregations is None or aggregate_request.aggregations == [] @@ -495,8 +515,10 @@ async def aggregate( aggs = [] if db_response: result_aggs = db_response.get("aggregations", {}) - - for agg in supported_aggregations + self.GEO_POINT_AGGREGATIONS: + for agg in { + frozenset(item.items()): item + for item in supported_aggregations + self.GEO_POINT_AGGREGATIONS + }.values(): if agg["name"] in aggregate_request.aggregations: if agg["name"].endswith("_frequency"): aggs.append( @@ -508,23 +530,34 @@ async def aggregate( aggs.append( self.metric_agg(result_aggs, agg["name"], agg["data_type"]) ) - links = [ - { - "rel": "self", - "type": "application/json", - "href": urljoin(base_url, "aggregate"), - }, {"rel": "root", "type": "application/json", "href": base_url}, ] - # if collection_endpoint: - # links.append( - # { - # "rel": "collection", - # "type": "application/json", - # "href": collection_endpoint, - # } - # ) + + if collection_id: + collection_endpoint = urljoin(base_url, f"collections/{collection_id}") + links.extend( + [ + { + "rel": "collection", + "type": "application/json", + "href": collection_endpoint, + }, + { + "rel": "self", + "type": "application/json", + "href": urljoin(collection_endpoint, "aggregate"), + }, + ] + ) + else: + links.append( + { + "rel": "self", + "type": "application/json", + "href": urljoin(base_url, "aggregate"), + } + ) results = AggregationCollection( type="AggregationCollection", aggregations=aggs, links=links ) diff --git a/stac_fastapi/tests/extensions/test_aggregation.py b/stac_fastapi/tests/extensions/test_aggregation.py index 99fc1a8c..9ee4c708 100644 --- a/stac_fastapi/tests/extensions/test_aggregation.py +++ b/stac_fastapi/tests/extensions/test_aggregation.py @@ -108,127 +108,86 @@ async def test_aggregate_search_point_does_not_intersect(app_client, ctx): @pytest.mark.asyncio -async def test_aggregate_filter_extension_eq_post(app_client, ctx): - params = { - "filter": {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, - "filter-lang": "cql2-json", - "aggregations": ["total_count"], - } - resp = await app_client.post("/aggregate", json=params) - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 1 +async def test_get_collection_aggregate_no_collection(app_client, ctx, load_test_data): - -@pytest.mark.asyncio -async def test_aggregate_extension_gte_get(app_client, ctx): - # there's one item that can match, so one of these queries should match it and the other shouldn't resp = await app_client.get( - '/aggregate?aggregations=total_count&grid_geohex_frequency_precision=2&filter-lang=cql2-json&filter={"op":"<=","args":[{"property": "properties.proj:epsg"},32756]}' + "/collections/not-a-collection/aggregate?aggregations=total_count" ) + assert resp.status_code == 404 - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 1 + +@pytest.mark.asyncio +async def test_get_collection_aggregate(app_client, ctx, load_test_data): + test_collection = load_test_data("test_collection.json") resp = await app_client.get( - '/aggregate?aggregations=total_count&grid_geohex_frequency_precision=2&filter-lang=cql2-json&filter={"op":">","args":[{"property": "properties.proj:epsg"},32756]}' + f"/collections/{test_collection['id']}/aggregate?aggregations=total_count" ) - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 0 + assert resp.json()["aggregations"][0]["value"] == 1 @pytest.mark.asyncio -async def test_aggregate_filter_extension_gte_post(app_client, ctx): - # there's one item that can match, so one of these queries should match it and the other shouldn't +async def test_post_collection_aggregate(app_client, ctx, load_test_data): + test_collection = load_test_data("test_collection.json") + params = { - "filter": { - "op": "<=", - "args": [ - {"property": "properties.proj:epsg"}, - ctx.item["properties"]["proj:epsg"], - ], - }, - "filter-lang": "cql2-json", "aggregations": ["total_count"], } - resp = await app_client.post("/aggregate", json=params) + resp = await app_client.post( + f"/collections/{test_collection['id']}/aggregate", json=params + ) assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 1 + +@pytest.mark.asyncio +async def test_aggregate_datetime_out_of_range(app_client, ctx): params = { - "filter": { - "op": ">", - "args": [ - {"property": "properties.proj:epsg"}, - ctx.item["properties"]["proj:epsg"], - ], - }, - "filter-lang": "cql2-json", + "datetime": "2023-07-14T02:05:01.324Z/2024-02-28T23:13:08.000Z", "aggregations": ["total_count"], } resp = await app_client.post("/aggregate", json=params) - assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 0 @pytest.mark.asyncio -async def test_aggregate_filter_ext_and_get(app_client, ctx): - resp = await app_client.get( - '/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"<=","args":[{"property":"properties.proj:epsg"},32756]},{"op":"=","args":[{"property":"id"},"test-item"]}]}' - ) - - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 1 - - -@pytest.mark.asyncio -async def test_aggregate_filter_ext_and_get_id(app_client, ctx): - collection = ctx.item["collection"] - id = ctx.item["id"] - filter = f"id='{id}' AND collection='{collection}'" - resp = await app_client.get(f"/aggregate?aggregations=total_count&filter={filter}") - +async def test_aggregate_datetime_in_range(app_client, ctx): + params = { + "datetime": "2020-02-11T12:30:22Z/2020-02-13T12:30:22Z", + "aggregations": ["total_count"], + } + resp = await app_client.post("/aggregate", json=params) assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 1 @pytest.mark.asyncio -async def test_aggregate_filter_ext_and_get_cql2text_id(app_client, ctx): - collection = ctx.item["collection"] - id = ctx.item["id"] - filter = f"id='{id}' AND collection='{collection}'" - resp = await app_client.get( - f"/aggregate?aggregations=total_count&filter-lang=cql2-text&filter={filter}" - ) - +async def test_aggregate_filter_extension_eq_post(app_client, ctx): + params = { + "filter": {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + "filter-lang": "cql2-json", + "aggregations": ["total_count"], + } + resp = await app_client.post("/aggregate", json=params) assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 1 @pytest.mark.asyncio -async def test_aggregate_filter_ext_and_get_cql2text_cloud_cover(app_client, ctx): - collection = ctx.item["collection"] - cloud_cover = ctx.item["properties"]["eo:cloud_cover"] - filter = f"cloud_cover={cloud_cover} AND collection='{collection}'" +async def test_aggregate_extension_gte_get(app_client, ctx): + # there's one item that can match, so one of these queries should match it and the other shouldn't resp = await app_client.get( - f"/aggregate?aggregations=total_count&filter-lang=cql2-text&filter={filter}" + '/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"<=","args":[{"property": "properties.proj:epsg"},32756]}' ) assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 1 - -@pytest.mark.asyncio -async def test_aggregate_filter_ext_and_get_cql2text_cloud_cover_no_results( - app_client, ctx -): - collection = ctx.item["collection"] - cloud_cover = ctx.item["properties"]["eo:cloud_cover"] + 1 - filter = f"cloud_cover={cloud_cover} AND collection='{collection}'" resp = await app_client.get( - f"/aggregate?aggregations=total_count&filter-lang=cql2-text&filter={filter}" + '/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":">","args":[{"property": "properties.proj:epsg"},32756]}' ) assert resp.status_code == 200 @@ -236,19 +195,14 @@ async def test_aggregate_filter_ext_and_get_cql2text_cloud_cover_no_results( @pytest.mark.asyncio -async def test_aggregate_filter_ext_and_post(app_client, ctx): +async def test_aggregate_filter_extension_gte_post(app_client, ctx): + # there's one item that can match, so one of these queries should match it and the other shouldn't params = { "filter": { - "op": "and", + "op": "<=", "args": [ - { - "op": "<=", - "args": [ - {"property": "properties.proj:epsg"}, - ctx.item["properties"]["proj:epsg"], - ], - }, - {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, + {"property": "properties.proj:epsg"}, + ctx.item["properties"]["proj:epsg"], ], }, "filter-lang": "cql2-json", @@ -259,54 +213,12 @@ async def test_aggregate_filter_ext_and_post(app_client, ctx): assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 1 - -@pytest.mark.asyncio -async def test_aggregate_filter_extension_floats_get(app_client, ctx): - resp = await app_client.get( - """/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"=","args":[{"property":"id"},"test-item"]},{"op":">","args":[{"property":"properties.view:sun_elevation"},"-37.30891534"]},{"op":"<","args":[{"property":"properties.view:sun_elevation"},"-37.30691534"]}]}""" - ) - - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 1 - - resp = await app_client.get( - """/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"=","args":[{"property":"id"},"test-item-7"]},{"op":">","args":[{"property":"properties.view:sun_elevation"},"-37.30891534"]},{"op":"<","args":[{"property":"properties.view:sun_elevation"},"-37.30691534"]}]}""" - ) - - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 0 - - resp = await app_client.get( - """/aggregate?aggregations=total_count&filter-lang=cql2-json&filter={"op":"and","args":[{"op":"=","args":[{"property":"id"},"test-item"]},{"op":">","args":[{"property":"properties.view:sun_elevation"},"-37.30591534"]},{"op":"<","args":[{"property":"properties.view:sun_elevation"},"-37.30491534"]}]}""" - ) - - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 0 - - -@pytest.mark.asyncio -async def test_aggregate_filter_extension_floats_post(app_client, ctx): - sun_elevation = ctx.item["properties"]["view:sun_elevation"] - params = { "filter": { - "op": "and", + "op": ">", "args": [ - {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, - { - "op": ">", - "args": [ - {"property": "properties.view:sun_elevation"}, - sun_elevation - 0.01, - ], - }, - { - "op": "<", - "args": [ - {"property": "properties.view:sun_elevation"}, - sun_elevation + 0.01, - ], - }, + {"property": "properties.proj:epsg"}, + ctx.item["properties"]["proj:epsg"], ], }, "filter-lang": "cql2-json", @@ -314,6 +226,17 @@ async def test_aggregate_filter_extension_floats_post(app_client, ctx): } resp = await app_client.post("/aggregate", json=params) + assert resp.status_code == 200 + assert resp.json()["aggregations"][0]["value"] == 0 + + +@pytest.mark.asyncio +async def test_aggregate_filter_ext_and_get_id(app_client, ctx): + collection = ctx.item["collection"] + id = ctx.item["id"] + filter = f"id='{id}' AND collection='{collection}'" + resp = await app_client.get(f"/aggregate?aggregations=total_count&filter={filter}") + assert resp.status_code == 200 assert resp.json()["aggregations"][0]["value"] == 1 @@ -390,36 +313,6 @@ async def test_aggregate_filter_extension_wildcard_es(app_client, ctx): assert resp.json()["aggregations"][0]["value"] == 1 -@pytest.mark.asyncio -async def test_aggregate_filter_extension_escape_chars(app_client, ctx): - esc_chars = ( - ctx.item["properties"]["landsat:product_id"].replace("_", "\\_")[:-1] + "_" - ) - - params = { - "filter": { - "op": "and", - "args": [ - {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, - { - "op": "like", - "args": [ - {"property": "properties.landsat:product_id"}, - esc_chars, - ], - }, - ], - }, - "filter-lang": "cql2-json", - "aggregations": ["total_count"], - } - - resp = await app_client.post("/aggregate", json=params) - - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 1 - - @pytest.mark.asyncio async def test_aggregate_filter_extension_in(app_client, ctx): product_id = ctx.item["properties"]["landsat:product_id"] @@ -479,7 +372,7 @@ async def test_aggregate_filter_extension_in_no_list(app_client, ctx): @pytest.mark.asyncio -async def test_aggrgeate_datetime_non_interval(app_client, ctx): +async def test_aggregate_datetime_non_interval(app_client, ctx): dt_formats = [ "2020-02-12T12:30:22+00:00", "2020-02-12T12:30:22.00Z", @@ -495,37 +388,6 @@ async def test_aggrgeate_datetime_non_interval(app_client, ctx): assert resp.json()["aggregations"][0]["value"] == 1 -@pytest.mark.asyncio -async def test_aggregate_filter_extension_between(app_client, ctx): - sun_elevation = ctx.item["properties"]["view:sun_elevation"] - - params = { - "filter": { - "op": "and", - "args": [ - {"op": "=", "args": [{"property": "id"}, ctx.item["id"]]}, - { - "op": "between", - "args": [ - {"property": "properties.view:sun_elevation"}, - sun_elevation - 0.01, - sun_elevation + 0.01, - ], - }, - ], - }, - "filter-lang": "cql2-json", - "aggregations": ["total_count"], - } - resp = await app_client.post("/aggregate", json=params) - - assert resp.status_code == 200 - assert resp.json()["aggregations"][0]["value"] == 1 - - -# Test each aggregation - - @pytest.mark.asyncio async def test_post_aggregate_total_count(app_client, ctx): From 9e10fbd72f18d584519c5dfa6f7a214d1a62212b Mon Sep 17 00:00:00 2001 From: James Date: Tue, 9 Jul 2024 18:14:21 -0400 Subject: [PATCH 16/18] update changelog --- CHANGELOG.md | 1 + 1 file changed, 1 insertion(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 9c54e5df..712fa5e6 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -8,6 +8,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. ## [Unreleased] ### Added + - Added an implementation of the Aggregation Extension [#276](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/276) - Added support for route depndencies configuration through the STAC_FASTAPI_ROUTE_DEPENDENCIES environment variable, directly or via json file. Allows for fastapi's inbuilt OAuth2 flows to be used as dependencies. Custom dependencies can also be written, see Basic Auth for an example. [#251](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/251) - Added docker-compose.route_dependencies_file.yml that gives an example of OAuth2 workflow using keycloak as the identity provider. [#251](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/251) - Added docker-compose.route_dependencies_env.yml that gives an example using the STAC_FASTAPI_ROUTE_DEPENDENCIES environment variable. [#251](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/251) From 430fedf3bec601fbc886cd6802ceaed1be1c8bf3 Mon Sep 17 00:00:00 2001 From: James Date: Tue, 9 Jul 2024 18:37:18 -0400 Subject: [PATCH 17/18] rerun checks --- CHANGELOG.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/CHANGELOG.md b/CHANGELOG.md index 712fa5e6..305e9002 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -8,7 +8,7 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0. ## [Unreleased] ### Added - - Added an implementation of the Aggregation Extension [#276](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/276) + - Added an implementation of the Aggregation Extension. Enables spatial, frequency distribution, and datetime distribution aggregations. [#276](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/276) - Added support for route depndencies configuration through the STAC_FASTAPI_ROUTE_DEPENDENCIES environment variable, directly or via json file. Allows for fastapi's inbuilt OAuth2 flows to be used as dependencies. Custom dependencies can also be written, see Basic Auth for an example. [#251](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/251) - Added docker-compose.route_dependencies_file.yml that gives an example of OAuth2 workflow using keycloak as the identity provider. [#251](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/251) - Added docker-compose.route_dependencies_env.yml that gives an example using the STAC_FASTAPI_ROUTE_DEPENDENCIES environment variable. [#251](https://github.com/stac-utils/stac-fastapi-elasticsearch-opensearch/pull/251) From 23234aee97fa9e6fa4157601768c58344043302c Mon Sep 17 00:00:00 2001 From: James Date: Wed, 10 Jul 2024 07:22:26 -0400 Subject: [PATCH 18/18] remove geom_geohex commented code --- .../core/stac_fastapi/core/extensions/aggregation.py | 12 ------------ .../stac_fastapi/elasticsearch/database_logic.py | 11 ----------- .../stac_fastapi/opensearch/database_logic.py | 9 --------- 3 files changed, 32 deletions(-) diff --git a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py index fc8a1379..ddab6829 100644 --- a/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py +++ b/stac_fastapi/core/stac_fastapi/core/extensions/aggregation.py @@ -92,11 +92,6 @@ class EsAsyncAggregationClient(AsyncBaseAggregationClient): "data_type": "frequency_distribution", "frequency_distribution_data_type": "string", }, - # { - # "name": "geometry_geohex_grid_frequency", - # "data_type": "frequency_distribution", - # "frequency_distribution_data_type": "string", - # }, { "name": "geometry_geotile_grid_frequency", "data_type": "frequency_distribution", @@ -485,12 +480,6 @@ async def aggregate( self.MAX_GEOHASH_PRECISION, ) - # geometry_geohex_grid_frequency_precision = self.extract_precision( - # aggregate_request.geometry_geohex_grid_frequency_precision, - # 0, - # self.MAX_GEOHEX_PRECISION - # ) - geometry_geotile_grid_precision = self.extract_precision( aggregate_request.geometry_geotile_grid_frequency_precision, 0, @@ -506,7 +495,6 @@ async def aggregate( centroid_geohex_grid_precision, centroid_geotile_grid_precision, geometry_geohash_grid_precision, - # geometry_geohex_grid_precision, geometry_geotile_grid_precision, ) except Exception as error: diff --git a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py index f2ec0134..348b8784 100644 --- a/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py +++ b/stac_fastapi/elasticsearch/stac_fastapi/elasticsearch/database_logic.py @@ -644,7 +644,6 @@ async def aggregate( centroid_geohex_grid_precision: int, centroid_geotile_grid_precision: int, geometry_geohash_grid_precision: int, - # geometry_geohex_grid_precision: int, geometry_geotile_grid_precision: int, ignore_unavailable: Optional[bool] = True, ): @@ -705,7 +704,6 @@ async def aggregate( k: v for k, v in agg_2_es.items() if k in aggregations } - # centroid if "centroid_geohash_grid_frequency" in aggregations: search_body["aggregations"]["centroid_geohash_grid_frequency"] = { "geohash_grid": { @@ -730,7 +728,6 @@ async def aggregate( } } - # geometry if "geometry_geohash_grid_frequency" in aggregations: search_body["aggregations"]["geometry_geohash_grid_frequency"] = { "geohash_grid": { @@ -739,14 +736,6 @@ async def aggregate( } } - # if "geometry_geohex_grid_frequency" in aggregations: - # search_body["aggregations"]["geometry_geohex_grid_frequency"] = { - # "geohex_grid": { - # "field": "geometry", - # "precision": geometry_geohex_grid_precision, - # } - # } - if "geometry_geotile_grid_frequency" in aggregations: search_body["aggregations"]["geometry_geotile_grid_frequency"] = { "geotile_grid": { diff --git a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py index 49c9659d..1a0e7c85 100644 --- a/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py +++ b/stac_fastapi/opensearch/stac_fastapi/opensearch/database_logic.py @@ -676,7 +676,6 @@ async def aggregate( centroid_geohex_grid_precision: int, centroid_geotile_grid_precision: int, geometry_geohash_grid_precision: int, - # geometry_geohex_grid_precision: int, geometry_geotile_grid_precision: int, ignore_unavailable: Optional[bool] = True, ): @@ -769,14 +768,6 @@ async def aggregate( } } - # if "geometry_geohex_grid_frequency" in aggregations: - # search_body["aggregations"]["geometry_geohex_grid_frequency"] = { - # "geohex_grid": { - # "field": "geometry", - # "precision": geometry_geohex_grid_precision, - # } - # } - if "geometry_geotile_grid_frequency" in aggregations: search_body["aggregations"]["geometry_geotile_grid_frequency"] = { "geotile_grid": {