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I am so sorry Jeff, I missed your message, I am just discovering it now.
Did you try something like "\r\n\r\n" instead of "\n\n" ?
If it does not solve the problem I am a little bit stuck as I only have access to Linux OS.
A small annoyance but on Windows RunStan produces double spacing between each line
e.g.
method = sample (Default)
sample
...
I tried modifying RunStan with
If[verbose, Print[StringReplace[runprocessResult["StandardOutput"],"\n\n"->"\n"]]];
but no joy.
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