diff --git a/workflow/scripts/adapter_removal_paired.py b/workflow/scripts/adapter_removal_paired.py index 9db04ea0..c7613ba4 100755 --- a/workflow/scripts/adapter_removal_paired.py +++ b/workflow/scripts/adapter_removal_paired.py @@ -28,7 +28,7 @@ "--cores", str(snakemake.threads), ] - args += snakemake.config["qc"]["cutadapt_opts"].split(" ") + args += snakemake.config["qc"]["cutadapt_opts"].split(" ") if snakemake.config["qc"]["cutadapt_opts"] else [] args += fwd_adapter_str.split(" ") args += rev_adapter_str.split(" ") args += [ diff --git a/workflow/scripts/adapter_removal_unpaired.py b/workflow/scripts/adapter_removal_unpaired.py index 221b866f..b28bcc64 100755 --- a/workflow/scripts/adapter_removal_unpaired.py +++ b/workflow/scripts/adapter_removal_unpaired.py @@ -27,7 +27,7 @@ "--cores", str(snakemake.threads), ] - args += snakemake.config["qc"]["cutadapt_opts"].split(" ") + args += snakemake.config["qc"]["cutadapt_opts"].split(" ") if snakemake.config["qc"]["cutadapt_opts"] else [] args += fwd_adapter_str.split(" ") args += rev_adapter_str.split(" ") args += [