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I'm trying to use plot heat map along trajectory with pl.paga_path function. Besides groups_key and pseudotime, I want to add another annotation "sample" in the heat map. However, with only four unique category value in the "sample" column, I got more than four colours in the heatmap annotation. I am wondering if there is any suggestions on adding category annotation in pl.paga_path heatmap.
Hello,
I'm trying to use plot heat map along trajectory with pl.paga_path function. Besides groups_key and pseudotime, I want to add another annotation "sample" in the heat map. However, with only four unique category value in the "sample" column, I got more than four colours in the heatmap annotation. I am wondering if there is any suggestions on adding category annotation in pl.paga_path heatmap.
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