From a53bc97c585ad44e8f8d555dbafd308afe14099c Mon Sep 17 00:00:00 2001 From: sh-ikeda Date: Tue, 12 Dec 2023 11:30:49 +0900 Subject: [PATCH 1/7] update curl package version --- Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/Dockerfile b/Dockerfile index 38e64c06..3bea0757 100644 --- a/Dockerfile +++ b/Dockerfile @@ -6,7 +6,7 @@ RUN apt-get update -y && apt-get install -y \ libjson-perl=4.04000-1 \ libany-uri-escape-perl=0.01-3 \ libwww-perl=6.61-1 \ - curl=7.81.0-1ubuntu1.14 \ + curl=7.81.0-1ubuntu1.15 \ wget=1.21.2-2ubuntu1 \ gawk=1:5.1.0-1build3 \ python3=3.10.6-1~22.04 \ From d176060eac135d50a3b63bc599d34b96773f2318 Mon Sep 17 00:00:00 2001 From: sh-ikeda Date: Tue, 12 Dec 2023 11:52:52 +0900 Subject: [PATCH 2/7] add pair_count_history.tsv --- log/pair_count_history.tsv | 18 ++++++++++++++++++ 1 file changed, 18 insertions(+) create mode 100644 log/pair_count_history.tsv diff --git a/log/pair_count_history.tsv b/log/pair_count_history.tsv new file mode 100644 index 00000000..f748b529 --- /dev/null +++ b/log/pair_count_history.tsv @@ -0,0 +1,18 @@ +Date affy_probeset-ncbigene assembly_insdc-bioproject assembly_insdc-biosample assembly_insdc-insdc_master atc-pubchem_compound bioproject-biosample bioproject-geo_series bioproject-pubmed bioproject_umbrella-bioproject biosample-bioproject cellosaurus-ncit_disease cellosaurus-orphanet cellosaurus-orphanet_phenotype chebi-inchi_key chembl_compound-chebi chembl_compound-chembl_target chembl_compound-drugbank chembl_compound-hmdb chembl_compound-inchi_key chembl_compound-mesh chembl_compound-pdb_ccd chembl_compound-pubchem_compound chembl_compound-pubchem_substance chembl_compound-pubmed chembl_target-ensembl_gene chembl_target-go chembl_target-interpro chembl_target-pdb chembl_target-pfam chembl_target-reactome_pathway chembl_target-uniprot clinvar-medgen cog-insdc cog-refseq_protein doid-mesh doid-ncit_disease doid-omim_phenotype ensembl_gene-affy_probeset ensembl_gene-ensembl_protein ensembl_gene-ensembl_transcript ensembl_gene-hgnc ensembl_gene-ncbigene ensembl_gene-uniprot ensembl_protein-ensembl_transcript ensembl_transcript-affy_probeset ensembl_transcript-go ensembl_transcript-hgnc ensembl_transcript-refseq_rna gea-bioproject gea-biosample glytoucan-doid glytoucan-ncbigene glytoucan-uniprot hgnc-ccds hgnc-ec hgnc-ensembl_gene hgnc-hgnc_symbol hgnc-insdc hgnc-lrg hgnc-mgi hgnc-mgi_gene hgnc-mirbase hgnc-ncbigene hgnc-omim_gene hgnc-pubmed hgnc-refseq_rna hgnc-rgd hgnc-uniprot hmdb-chebi hmdb-inchi_key hmdb-pdb_ccd hmdb-pubchem_compound homologene-ncbigene hp_inheritance-omim_phenotype hp_phenotype-ncbigene hp_phenotype-omim_phenotype hp_phenotype-orphanet hp_phenotype-orphanet_phenotype insdc-bioproject insdc-biosample insdc_master-bioproject insdc_master-biosample interpro-go interpro-pdb interpro-pfam interpro-prosite interpro-pubmed interpro-reactome_pathway interpro-smart interpro-uniprot jga_study-jga_dataset jga_study-nbdc_human_db jga_study-pubmed lipidmaps-chebi lipidmaps-inchi_key lipidmaps-swisslipids mbgd_gene-uniprot mbgd_organism-taxonomy medgen-hp_phenotype medgen-mesh medgen-mondo medgen-ncbigene medgen-omim_phenotype medgen-orphanet medgen-orphanet_phenotype mgi_gene-ensembl_gene mgi_gene-hgnc mgi_gene-mgi_allele mgi_gene-ncbigene mgi_gene-uniprot mgi_genotype-doid mgi_genotype-mgi_allele mgi_genotype-mp mondo-doid mondo-hp_phenotype mondo-meddra mondo-mesh mondo-omim_phenotype mondo-orphanet mondo-orphanet_phenotype nando-mondo ncbigene-ensembl_gene ncbigene-ensembl_protein ncbigene-ensembl_transcript ncbigene-flybase_gene ncbigene-go ncbigene-hgnc ncbigene-mgi ncbigene-mgi_gene ncbigene-mirbase ncbigene-omim_gene ncbigene-refseq_genomic ncbigene-refseq_protein ncbigene-refseq_rna ncbigene-rgd ncbigene-sgd ncbigene-tair ncbigene-taxonomy ncbigene-vgnc ncbigene-wormbase_gene ncbigene-xenbase_gene ncbigene-zfin_gene ncit_disease-ncit_tissue oma_protein-ensembl_gene oma_protein-ensembl_transcript oma_protein-ncbigene 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refseq_rna-dbsnp refseq_rna-hgnc refseq_rna-ncbigene refseq_rna-omim_gene refseq_rna-pubmed refseq_rna-refseq_protein refseq_rna-taxonomy rhea-chebi rhea-ec rhea-go rhea-pubmed rhea-reactome_reaction rhea-uniprot sra_accession-bioproject sra_accession-biosample sra_accession-sra_analysis sra_accession-sra_experiment sra_accession-sra_project sra_accession-sra_run sra_accession-sra_sample sra_experiment-bioproject sra_experiment-biosample sra_experiment-sra_project sra_experiment-sra_sample sra_project-bioproject sra_run-bioproject sra_run-biosample sra_run-sra_experiment sra_run-sra_project sra_run-sra_sample sra_sample-biosample swisslipids-chebi swisslipids-hmdb swisslipids-inchi_key taxonomy-pubmed togovar-clinvar togovar-dbsnp togovar-ensembl_gene togovar-ensembl_transcript togovar-hgnc togovar-medgen togovar-ncbigene togovar-pubmed togovar-refseq_rna total uberon-ncit_tissue uniprot-chembl_target uniprot-dbsnp uniprot-ec uniprot-ensembl_gene uniprot-ensembl_protein 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30644195 542748 35120880 29829587 26800643 27135732 27143544 27143358 464237 28593261 28916090 28966143 28948900 28923793 27699956 4276 26026 593209 49106 720705 66877211 72473309 287277970 60732887 935843 60001809 692119 173346179 4595278330 2586 10146 65606 39736080 9437437 9647434 9647434 466768100 81875 284374766 230955 13734202 12027805 16106 7021 8188 355933 259506 49539508 251702059 437326 151 505473 11468 951 4014 1361 29837 33519 +2023-12-11 19063 1931425 1943066 1875870 2359519 197486 258531 100433 2359519 68557 38153 141392 34314 3091832 8206 11766 1915138 47707 13954 1878362 433124 1439514 2126 12004 11110 33678 3448 8014 8178 1711989 115826 3340026 4019 4849 5671 54210 12180884 14437446 44278 6179217 4924829 12180887 218298 52748677 219677 10179574 141 5046 290 1270 49240 35219 1995 40970 43667 21167 1325 23383 1912 43615 16942 33774 28381 18954 20365 13701 217899 522 104230 275237 8660 220065 129729 111606 59409158 193975949 1533582 1533178 30407 1402682 20191 1283 109057 435537 1275 718778680 199 305 130 12885 47826 12345 137319849 6318 16674 16849 21567 7229 11043 9063 56590 24607 100681 55041 79466 7723 122501 392060 10712 574 1486 8352 9693 10380 2390 9401535 10957535 11411226 25107 59267218 43742 71696 17541 18390 211691 59902828 58545286 42518 6464 32835 49172030 112107 19850 46225 27132 26233 2460780 2804840 4800754 18299774 4319 4337 4316 4298 1192 1798 7832 8040 1685211 726658 530587 339565 341431 1461 4812 141021 2327813 10789 31767 116069142 32308 69387 1252527 2814 620221 1196 267131 12983 42184 327 400679 919326 202526 3335 15106 182 710946 179950006 267549861 227165 57852462 188790 5817042 50390902 57882313 201816 7528 4387 135188 1438 36026464 465022 27780237 270279 30842754 545391 35331467 30086390 26890778 27211369 27233679 27233493 465038 28691217 28992466 29065822 29046856 29015366 27789171 4276 26026 593209 49088 720705 66877211 72473309 287277970 60732887 935843 60001809 692119 173346179 4605985207 2586 10146 65606 39736080 9437437 9647434 9647434 466768100 81875 284374766 230955 13734202 12027805 16106 7021 8188 355933 259506 49539508 251702059 437326 151 505473 11468 951 4014 1361 29837 33519 From 798e6b1a7ce613e66e608992e544be19cdd8277d Mon Sep 17 00:00:00 2001 From: sh-ikeda Date: Tue, 12 Dec 2023 11:58:43 +0900 Subject: [PATCH 3/7] add linechart --- log/pair_count_linechart.html | 84 +++++++++++++++++++++++++++++++++++ 1 file changed, 84 insertions(+) create mode 100644 log/pair_count_linechart.html diff --git a/log/pair_count_linechart.html b/log/pair_count_linechart.html new file mode 100644 index 00000000..61da1b7f --- /dev/null +++ b/log/pair_count_linechart.html @@ -0,0 +1,84 @@ + + + + + + TogoID Pair Stats + + + + + + + + + + + + From 9fe35918a5f8a5ead537ad245c763c0d51799e75 Mon Sep 17 00:00:00 2001 From: sh-ikeda Date: Tue, 12 Dec 2023 13:48:03 +0900 Subject: [PATCH 4/7] fix URL --- log/pair_count_linechart.html | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/log/pair_count_linechart.html b/log/pair_count_linechart.html index 61da1b7f..69494457 100644 --- a/log/pair_count_linechart.html +++ b/log/pair_count_linechart.html @@ -53,8 +53,7 @@ // テキストファイルから選択肢を読み込む関数 function loadOptions() { - // ファイルのパス - const filePath = 'https://raw.githubusercontent.com/sh-ikeda/togoid-stats/main/pair_count/pair_count_series.tsv'; + const filePath = 'https://raw.githubusercontent.com/togoid/togoid-config/main/log/pair_count_history.tsv'; // ファイルを非同期で読み込む fetch(filePath) .then(response => response.text()) From 5f6fcc80ca6abbc46d855465e5137e8771cbfc9b Mon Sep 17 00:00:00 2001 From: Toshiaki Katayama Date: Sat, 16 Dec 2023 06:50:58 +0900 Subject: [PATCH 5/7] Updated logs --- log/pair_count.tsv | 112 +- log/update.log | 3266 ++++++++++++++++++++++---------------------- 2 files changed, 1683 insertions(+), 1695 deletions(-) diff --git a/log/pair_count.tsv b/log/pair_count.tsv index fc6a0ebf..7107b9c4 100644 --- a/log/pair_count.tsv +++ b/log/pair_count.tsv @@ -1,12 +1,12 @@ affy_probeset-ncbigene.tsv 19063 -assembly_insdc-bioproject.tsv 1931425 -assembly_insdc-biosample.tsv 1943066 -assembly_insdc-insdc_master.tsv 1875870 -bioproject-biosample.tsv 2359519 -bioproject-geo_series.tsv 197486 -bioproject-pubmed.tsv 258531 -bioproject_umbrella-bioproject.tsv 100433 -biosample-bioproject.tsv 2359519 +assembly_insdc-bioproject.tsv 1945629 +assembly_insdc-biosample.tsv 1957294 +assembly_insdc-insdc_master.tsv 1889897 +bioproject-biosample.tsv 2381354 +bioproject-geo_series.tsv 197910 +bioproject-pubmed.tsv 259137 +bioproject_umbrella-bioproject.tsv 100626 +biosample-bioproject.tsv 2381354 cellosaurus-ncit_disease.tsv 68557 cellosaurus-orphanet_phenotype.tsv 38153 chebi-inchi_key.tsv 141392 @@ -87,8 +87,8 @@ interpro-uniprot.tsv 718778680 jga_study-jga_dataset.tsv 199 jga_study-nbdc_human_db.tsv 305 jga_study-pubmed.tsv 130 -lipidmaps-chebi.tsv 12885 -lipidmaps-inchi_key.tsv 47826 +lipidmaps-chebi.tsv 12890 +lipidmaps-inchi_key.tsv 47841 lipidmaps-swisslipids.tsv 12345 mbgd_gene-uniprot.tsv 137319849 mbgd_organism-taxonomy.tsv 6318 @@ -100,12 +100,12 @@ medgen-omim_phenotype.tsv 11043 medgen-orphanet_phenotype.tsv 9063 mgi_gene-ensembl_gene.tsv 56590 mgi_gene-hgnc.tsv 24607 -mgi_gene-mgi_allele.tsv 100681 +mgi_gene-mgi_allele.tsv 100770 mgi_gene-ncbigene.tsv 55041 mgi_gene-uniprot.tsv 79466 -mgi_genotype-doid.tsv 7723 -mgi_genotype-mgi_allele.tsv 122501 -mgi_genotype-mp.tsv 392060 +mgi_genotype-doid.tsv 7724 +mgi_genotype-mgi_allele.tsv 122809 +mgi_genotype-mp.tsv 393496 mondo-doid.tsv 10712 mondo-hp_phenotype.tsv 574 mondo-meddra.tsv 1486 @@ -113,26 +113,26 @@ mondo-mesh.tsv 8352 mondo-omim_phenotype.tsv 9693 mondo-orphanet_phenotype.tsv 10380 nando-mondo.tsv 2390 -ncbigene-ensembl_gene.tsv 9401535 -ncbigene-ensembl_protein.tsv 10957535 -ncbigene-ensembl_transcript.tsv 11411226 +ncbigene-ensembl_gene.tsv 9485712 +ncbigene-ensembl_protein.tsv 11058301 +ncbigene-ensembl_transcript.tsv 11567584 ncbigene-flybase_gene.tsv 25107 -ncbigene-go.tsv 59267218 -ncbigene-hgnc.tsv 43742 +ncbigene-go.tsv 68314687 +ncbigene-hgnc.tsv 43739 ncbigene-mgi_gene.tsv 71696 ncbigene-mirbase.tsv 17541 -ncbigene-omim_gene.tsv 18390 -ncbigene-refseq_genomic.tsv 211691 -ncbigene-refseq_protein.tsv 59902828 -ncbigene-refseq_rna.tsv 58545286 -ncbigene-rgd.tsv 42518 +ncbigene-omim_gene.tsv 18398 +ncbigene-refseq_genomic.tsv 211693 +ncbigene-refseq_protein.tsv 60108727 +ncbigene-refseq_rna.tsv 58752275 +ncbigene-rgd.tsv 42517 ncbigene-sgd.tsv 6464 ncbigene-tair.tsv 32835 -ncbigene-taxonomy.tsv 49172030 +ncbigene-taxonomy.tsv 49342670 ncbigene-vgnc.tsv 112107 ncbigene-wormbase_gene.tsv 19850 ncbigene-xenbase_gene.tsv 46225 -ncbigene-zfin_gene.tsv 27132 +ncbigene-zfin_gene.tsv 27131 ncit_disease-ncit_tissue.tsv 26233 oma_protein-ensembl_gene.tsv 2460780 oma_protein-ensembl_transcript.tsv 2804840 @@ -157,25 +157,25 @@ pubchem_compound-chebi.tsv 141021 pubchem_compound-chembl_compound.tsv 2327813 pubchem_compound-drugbank.tsv 10789 pubchem_compound-glytoucan.tsv 31767 -pubchem_compound-inchi_key.tsv 116069142 +pubchem_compound-inchi_key.tsv 116072087 pubchem_pathway-ncbigene.tsv 32308 pubchem_pathway-pathbank.tsv 69387 pubchem_pathway-pubchem_compound.tsv 1252527 pubchem_pathway-reactome_pathway.tsv 2814 pubchem_pathway-uniprot.tsv 620221 pubchem_pathway-wikipathways.tsv 1196 -reactome_pathway-chebi.tsv 267131 +reactome_pathway-chebi.tsv 264859 reactome_pathway-go.tsv 12983 -reactome_pathway-iuphar_ligand.tsv 42184 -reactome_pathway-mirbase.tsv 327 +reactome_pathway-iuphar_ligand.tsv 40546 +reactome_pathway-mirbase.tsv 332 reactome_pathway-reactome_reaction.tsv 400679 -reactome_pathway-uniprot.tsv 919326 -reactome_reaction-chebi.tsv 202526 +reactome_pathway-uniprot.tsv 861452 +reactome_reaction-chebi.tsv 198020 reactome_reaction-go.tsv 3335 -reactome_reaction-iuphar_ligand.tsv 15106 -reactome_reaction-mirbase.tsv 182 -reactome_reaction-uniprot.tsv 710946 -refseq_protein-uniprot.tsv 179950006 +reactome_reaction-iuphar_ligand.tsv 14362 +reactome_reaction-mirbase.tsv 185 +reactome_reaction-uniprot.tsv 665149 +refseq_protein-uniprot.tsv 179950008 refseq_rna-dbsnp.tsv 267549861 refseq_rna-hgnc.tsv 227165 refseq_rna-ncbigene.tsv 57852462 @@ -189,28 +189,28 @@ rhea-go.tsv 4387 rhea-pubmed.tsv 135188 rhea-reactome_reaction.tsv 1438 rhea-uniprot.tsv 36026464 -sra_accession-bioproject.tsv 465022 -sra_accession-biosample.tsv 27780237 -sra_accession-sra_analysis.tsv 270279 -sra_accession-sra_experiment.tsv 30842754 -sra_accession-sra_project.tsv 545391 -sra_accession-sra_run.tsv 35331467 -sra_accession-sra_sample.tsv 30086390 -sra_experiment-bioproject.tsv 26890778 -sra_experiment-biosample.tsv 27211369 -sra_experiment-sra_project.tsv 27233679 -sra_experiment-sra_sample.tsv 27233493 -sra_project-bioproject.tsv 465038 -sra_run-bioproject.tsv 28691217 -sra_run-biosample.tsv 28992466 -sra_run-sra_experiment.tsv 29065822 -sra_run-sra_project.tsv 29046856 -sra_run-sra_sample.tsv 29015366 -sra_sample-biosample.tsv 27789171 +sra_accession-bioproject.tsv 465654 +sra_accession-biosample.tsv 27808778 +sra_accession-sra_analysis.tsv 270359 +sra_accession-sra_experiment.tsv 30935643 +sra_accession-sra_project.tsv 547096 +sra_accession-sra_run.tsv 35427306 +sra_accession-sra_sample.tsv 30173279 +sra_experiment-bioproject.tsv 26934437 +sra_experiment-biosample.tsv 27243277 +sra_experiment-sra_project.tsv 27277338 +sra_experiment-sra_sample.tsv 27277152 +sra_project-bioproject.tsv 465670 +sra_run-bioproject.tsv 28736336 +sra_run-biosample.tsv 29024695 +sra_run-sra_experiment.tsv 29111866 +sra_run-sra_project.tsv 29091975 +sra_run-sra_sample.tsv 29059787 +sra_sample-biosample.tsv 27817712 swisslipids-chebi.tsv 4276 swisslipids-hmdb.tsv 26026 swisslipids-inchi_key.tsv 593209 -taxonomy-pubmed.tsv 49088 +taxonomy-pubmed.tsv 49092 togovar-clinvar.tsv 720705 togovar-dbsnp.tsv 66877211 togovar-ensembl_gene.tsv 72473309 @@ -249,4 +249,4 @@ wikipathways-hmdb.tsv 4014 wikipathways-lipidmaps.tsv 1361 wikipathways-ncbigene.tsv 29837 wikipathways-uniprot.tsv 33519 -total 4605985207 +total 4616648409 diff --git a/log/update.log b/log/update.log index 379bc10a..b0d4228b 100644 --- a/log/update.log +++ b/log/update.log @@ -1,9 +1,9 @@ -*** Started: 2023-12-08T17:00:17 *** +*** Started: 2023-12-15T17:00:15 *** ## Prepare input files for Bioproject # Checking lock file input/bioproject/download.lock for download -# Local file time: 2023-11-30 20:49:43 +0900 (input/bioproject/bioproject.xml) -# Remote file time: 2023-12-07 11:51:03 +0000 (https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml) +# Local file time: 2023-12-07 20:51:03 +0900 (input/bioproject/bioproject.xml) +# Remote file time: 2023-12-14 11:59:51 +0000 (https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/bioproject https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml python bin/bioproject_xml2tsv.py input/bioproject/bioproject.xml > input/bioproject/bioproject.tsv # Overwriting timestamp of the input/bioproject/download.lock @@ -16,7 +16,7 @@ python bin/bioproject_xml2tsv.py input/bioproject/bioproject.xml > input/bioproj # Preserving timestamp of the input/cellosaurus/download.lock ## Prepare input files for Ensembl # Checking lock file input/ensembl/download.lock for download -# File input/ensembl/taxonomy.txt is created 6.999995651877732 days ago (will be updated when >5 days) +# File input/ensembl/taxonomy.txt is created 7.000045357855336 days ago (will be updated when >5 days) sparql_csv2tsv.sh input/ensembl/taxonomy.rq https://rdfportal.org/ebi/sparql > input/ensembl/taxonomy.txt # Overwriting timestamp of the input/ensembl/download.lock ## Prepare input files for HMDB @@ -61,49 +61,49 @@ bin/sparql_csv2tsv.sh bin/sparql/hp_category.rq https://rdfportal.org/bioportal/ # Preserving timestamp of the input/interpro/download.lock ## Prepare input files for MGI_GENE # Checking lock file input/mgi_gene/download.lock for download -# Local file time: 2023-11-27 22:07:53 +0900 (input/mgi_gene/MRK_List2.rpt) -# Remote file time: 2023-12-04 13:08:50 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_List2.rpt) +# Local file time: 2023-12-04 22:08:50 +0900 (input/mgi_gene/MRK_List2.rpt) +# Remote file time: 2023-12-11 13:07:13 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_List2.rpt) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MRK_List2.rpt -# Local file time: 2023-11-27 22:04:20 +0900 (input/mgi_gene/MGI_Gene_Model_Coord.rpt) -# Remote file time: 2023-12-04 13:05:06 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_Gene_Model_Coord.rpt) +# Local file time: 2023-12-04 22:05:06 +0900 (input/mgi_gene/MGI_Gene_Model_Coord.rpt) +# Remote file time: 2023-12-11 13:04:51 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_Gene_Model_Coord.rpt) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MGI_Gene_Model_Coord.rpt -# Local file time: 2023-11-27 22:08:05 +0900 (input/mgi_gene/MRK_SwissProt_TrEMBL.rpt) -# Remote file time: 2023-12-04 13:09:00 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_SwissProt_TrEMBL.rpt) +# Local file time: 2023-12-04 22:09:00 +0900 (input/mgi_gene/MRK_SwissProt_TrEMBL.rpt) +# Remote file time: 2023-12-11 13:07:25 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_SwissProt_TrEMBL.rpt) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MRK_SwissProt_TrEMBL.rpt -# Local file time: 2023-11-27 22:03:30 +0900 (input/mgi_gene/HGNC_AllianceHomology.rpt) -# Remote file time: 2023-12-04 13:03:58 +0000 (https://www.informatics.jax.org/downloads/reports/HGNC_AllianceHomology.rpt) +# Local file time: 2023-12-04 22:03:58 +0900 (input/mgi_gene/HGNC_AllianceHomology.rpt) +# Remote file time: 2023-12-11 13:03:41 +0000 (https://www.informatics.jax.org/downloads/reports/HGNC_AllianceHomology.rpt) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/HGNC_AllianceHomology.rpt -# Local file time: 2023-11-27 22:06:46 +0900 (input/mgi_gene/MGI_PhenotypicAllele.rpt) -# Remote file time: 2023-12-04 13:07:33 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_PhenotypicAllele.rpt) +# Local file time: 2023-12-04 22:07:33 +0900 (input/mgi_gene/MGI_PhenotypicAllele.rpt) +# Remote file time: 2023-12-11 13:06:11 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_PhenotypicAllele.rpt) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MGI_PhenotypicAllele.rpt # Overwriting timestamp of the input/mgi_gene/download.lock ## Prepare input files for MGI_GENOTYPE # Checking lock file input/mgi_genotype/download.lock for download -# Local file time: 2023-11-27 22:04:04 +0900 (input/mgi_genotype/MGI_DiseaseGeneModel.rpt) -# Remote file time: 2023-12-04 13:04:47 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_DiseaseGeneModel.rpt) +# Local file time: 2023-12-04 22:04:47 +0900 (input/mgi_genotype/MGI_DiseaseGeneModel.rpt) +# Remote file time: 2023-12-11 13:04:30 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_DiseaseGeneModel.rpt) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_genotype https://www.informatics.jax.org/downloads/reports/MGI_DiseaseGeneModel.rpt ruby bin/query_mousemine.rb > input/mgi_genotype/mousemine_genotype.tsv # Overwriting timestamp of the input/mgi_genotype/download.lock ## Prepare input files for NCBI Gene # Checking lock file input/ncbigene/download.lock for download -# Local file time: 2023-12-01 07:39:43 +0900 (input/ncbigene/gene2refseq.gz) -# Remote file time: 2023-12-07 05:33:56 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz) +# Local file time: 2023-12-07 14:33:56 +0900 (input/ncbigene/gene2refseq.gz) +# Remote file time: 2023-12-14 22:43:25 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz gzip -dc input/ncbigene/gene2refseq.gz > input/ncbigene/gene2refseq -# Local file time: 2023-12-01 07:36:03 +0900 (input/ncbigene/gene2ensembl.gz) -# Remote file time: 2023-12-07 05:30:36 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz) +# Local file time: 2023-12-07 14:30:36 +0900 (input/ncbigene/gene2ensembl.gz) +# Remote file time: 2023-12-14 22:39:46 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz gzip -dc input/ncbigene/gene2ensembl.gz > input/ncbigene/gene2ensembl -# Local file time: 2023-12-01 07:36:59 +0900 (input/ncbigene/gene2go.gz) -# Remote file time: 2023-12-07 05:31:35 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz) +# Local file time: 2023-12-07 14:31:35 +0900 (input/ncbigene/gene2go.gz) +# Remote file time: 2023-12-14 22:40:58 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz gzip -dc input/ncbigene/gene2go.gz > input/ncbigene/gene2go -# Local file time: 2023-12-01 07:45:41 +0900 (input/ncbigene/Homo_sapiens.gene_info.gz) -# Remote file time: 2023-12-07 05:40:18 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz) +# Local file time: 2023-12-07 14:40:18 +0900 (input/ncbigene/Homo_sapiens.gene_info.gz) +# Remote file time: 2023-12-14 22:49:27 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz gzip -dc input/ncbigene/Homo_sapiens.gene_info.gz > input/ncbigene/Homo_sapiens.gene_info -# Local file time: 2023-12-01 07:41:18 +0900 (input/ncbigene/gene_info.gz) -# Remote file time: 2023-12-07 05:35:41 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz) +# Local file time: 2023-12-07 14:35:41 +0900 (input/ncbigene/gene_info.gz) +# Remote file time: 2023-12-14 22:45:00 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz gzip -dc input/ncbigene/gene_info.gz > input/ncbigene/gene_info # Overwriting timestamp of the input/ncbigene/download.lock @@ -132,58 +132,46 @@ gzip -dc input/ncbigene/gene_info.gz > input/ncbigene/gene_info ## Prepare input files for Reactome # Checking lock file input/reactome/download.lock for download # Local file time: 2023-09-01 12:02:42 +0900 (input/reactome/UniProt2ReactomeReactions.txt) -# Remote file time: 2023-09-01 03:02:42 +0000 (https://reactome.org/download/current/UniProt2ReactomeReactions.txt) -# Local file size: 99590389 (input/reactome/UniProt2ReactomeReactions.txt) -# Remote file size: 99590389 (https://reactome.org/download/current/UniProt2ReactomeReactions.txt) +# Remote file time: 2023-11-30 19:03:34 +0000 (https://reactome.org/download/current/UniProt2ReactomeReactions.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/UniProt2ReactomeReactions.txt # Local file time: 2023-09-01 12:03:40 +0900 (input/reactome/ChEBI2ReactomeReactions.txt) -# Remote file time: 2023-09-01 03:03:40 +0000 (https://reactome.org/download/current/ChEBI2ReactomeReactions.txt) -# Local file size: 28649986 (input/reactome/ChEBI2ReactomeReactions.txt) -# Remote file size: 28649986 (https://reactome.org/download/current/ChEBI2ReactomeReactions.txt) +# Remote file time: 2023-11-30 19:04:36 +0000 (https://reactome.org/download/current/ChEBI2ReactomeReactions.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/ChEBI2ReactomeReactions.txt # Local file time: 2023-09-01 12:27:24 +0900 (input/reactome/Ensembl2ReactomeReactions.txt) -# Remote file time: 2023-09-01 03:27:24 +0000 (https://reactome.org/download/current/Ensembl2ReactomeReactions.txt) -# Local file size: 403047015 (input/reactome/Ensembl2ReactomeReactions.txt) -# Remote file size: 403047015 (https://reactome.org/download/current/Ensembl2ReactomeReactions.txt) +# Remote file time: 2023-11-30 19:28:15 +0000 (https://reactome.org/download/current/Ensembl2ReactomeReactions.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/Ensembl2ReactomeReactions.txt # Local file time: 2023-09-01 12:31:18 +0900 (input/reactome/miRBase2ReactomeReactions.txt) -# Remote file time: 2023-09-01 03:31:18 +0000 (https://reactome.org/download/current/miRBase2ReactomeReactions.txt) -# Local file size: 25510 (input/reactome/miRBase2ReactomeReactions.txt) -# Remote file size: 25510 (https://reactome.org/download/current/miRBase2ReactomeReactions.txt) +# Remote file time: 2023-11-30 19:32:42 +0000 (https://reactome.org/download/current/miRBase2ReactomeReactions.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/miRBase2ReactomeReactions.txt # Local file time: 2023-09-01 12:31:13 +0900 (input/reactome/NCBI2ReactomeReactions.txt) -# Remote file time: 2023-09-01 03:31:13 +0000 (https://reactome.org/download/current/NCBI2ReactomeReactions.txt) -# Local file size: 68547660 (input/reactome/NCBI2ReactomeReactions.txt) -# Remote file size: 68547660 (https://reactome.org/download/current/NCBI2ReactomeReactions.txt) +# Remote file time: 2023-11-30 19:32:38 +0000 (https://reactome.org/download/current/NCBI2ReactomeReactions.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/NCBI2ReactomeReactions.txt # Local file time: 2023-09-01 12:31:27 +0900 (input/reactome/GtoP2ReactomeReactions.txt) -# Remote file time: 2023-09-01 03:31:27 +0000 (https://reactome.org/download/current/GtoP2ReactomeReactions.txt) -# Local file size: 1923150 (input/reactome/GtoP2ReactomeReactions.txt) -# Remote file size: 1923150 (https://reactome.org/download/current/GtoP2ReactomeReactions.txt) +# Remote file time: 2023-11-30 19:32:52 +0000 (https://reactome.org/download/current/GtoP2ReactomeReactions.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/GtoP2ReactomeReactions.txt # Local file time: 2023-09-01 12:01:58 +0900 (input/reactome/UniProt2Reactome_All_Levels.txt) -# Remote file time: 2023-09-01 03:01:58 +0000 (https://reactome.org/download/current/UniProt2Reactome_All_Levels.txt) -# Local file size: 114070074 (input/reactome/UniProt2Reactome_All_Levels.txt) -# Remote file size: 114070074 (https://reactome.org/download/current/UniProt2Reactome_All_Levels.txt) +# Remote file time: 2023-11-30 19:02:52 +0000 (https://reactome.org/download/current/UniProt2Reactome_All_Levels.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/UniProt2Reactome_All_Levels.txt # Local file time: 2023-09-01 12:03:33 +0900 (input/reactome/ChEBI2Reactome_All_Levels.txt) -# Remote file time: 2023-09-01 03:03:33 +0000 (https://reactome.org/download/current/ChEBI2Reactome_All_Levels.txt) -# Local file size: 32708925 (input/reactome/ChEBI2Reactome_All_Levels.txt) -# Remote file size: 32708925 (https://reactome.org/download/current/ChEBI2Reactome_All_Levels.txt) +# Remote file time: 2023-11-30 19:04:29 +0000 (https://reactome.org/download/current/ChEBI2Reactome_All_Levels.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/ChEBI2Reactome_All_Levels.txt # Local file time: 2023-09-01 12:24:16 +0900 (input/reactome/Ensembl2Reactome_All_Levels.txt) -# Remote file time: 2023-09-01 03:24:16 +0000 (https://reactome.org/download/current/Ensembl2Reactome_All_Levels.txt) -# Local file size: 445712640 (input/reactome/Ensembl2Reactome_All_Levels.txt) -# Remote file size: 445712640 (https://reactome.org/download/current/Ensembl2Reactome_All_Levels.txt) +# Remote file time: 2023-11-30 19:25:02 +0000 (https://reactome.org/download/current/Ensembl2Reactome_All_Levels.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/Ensembl2Reactome_All_Levels.txt # Local file time: 2023-09-01 12:31:17 +0900 (input/reactome/miRBase2Reactome_All_Levels.txt) -# Remote file time: 2023-09-01 03:31:17 +0000 (https://reactome.org/download/current/miRBase2Reactome_All_Levels.txt) -# Local file size: 40920 (input/reactome/miRBase2Reactome_All_Levels.txt) -# Remote file size: 40920 (https://reactome.org/download/current/miRBase2Reactome_All_Levels.txt) +# Remote file time: 2023-11-30 19:32:41 +0000 (https://reactome.org/download/current/miRBase2Reactome_All_Levels.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/miRBase2Reactome_All_Levels.txt # Local file time: 2023-09-01 12:30:43 +0900 (input/reactome/NCBI2Reactome_All_Levels.txt) -# Remote file time: 2023-09-01 03:30:43 +0000 (https://reactome.org/download/current/NCBI2Reactome_All_Levels.txt) -# Local file size: 77621754 (input/reactome/NCBI2Reactome_All_Levels.txt) -# Remote file size: 77621754 (https://reactome.org/download/current/NCBI2Reactome_All_Levels.txt) +# Remote file time: 2023-11-30 19:32:04 +0000 (https://reactome.org/download/current/NCBI2Reactome_All_Levels.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/NCBI2Reactome_All_Levels.txt # Local file time: 2023-09-01 12:31:26 +0900 (input/reactome/GtoP2Reactome_All_Levels.txt) -# Remote file time: 2023-09-01 03:31:26 +0000 (https://reactome.org/download/current/GtoP2Reactome_All_Levels.txt) -# Local file size: 4927611 (input/reactome/GtoP2Reactome_All_Levels.txt) -# Remote file size: 4927611 (https://reactome.org/download/current/GtoP2Reactome_All_Levels.txt) -# Preserving timestamp of the input/reactome/download.lock +# Remote file time: 2023-11-30 19:32:51 +0000 (https://reactome.org/download/current/GtoP2Reactome_All_Levels.txt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/reactome https://reactome.org/download/current/GtoP2Reactome_All_Levels.txt +# Overwriting timestamp of the input/reactome/download.lock ## Prepare input files for RefSeq Protein # Checking lock file input/refseq_protein/download.lock for download -# Local file time: 2023-11-29 20:20:45 +0900 (input/refseq_protein/gene_refseq_uniprotkb_collab.gz) -# Remote file time: 2023-12-06 10:28:32 +0000 (https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz) +# Local file time: 2023-12-06 19:28:32 +0900 (input/refseq_protein/gene_refseq_uniprotkb_collab.gz) +# Remote file time: 2023-12-13 10:29:13 +0000 (https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/refseq_protein https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz # Overwriting timestamp of the input/refseq_protein/download.lock ## Prepare input files for RefSeq RNA @@ -210,8 +198,8 @@ wget --quiet --recursive --no-parent --no-directories --timestamping --no-check- # Preserving timestamp of the input/rhea/download.lock ## Prepare input files for SRA # Checking lock file input/sra/download.lock for download -# Local file time: 2023-12-01 05:46:32 +0900 (input/sra/SRA_Accessions.tab) -# Remote file time: 2023-12-07 20:46:08 +0000 (https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab) +# Local file time: 2023-12-08 05:46:08 +0900 (input/sra/SRA_Accessions.tab) +# Remote file time: 2023-12-14 21:16:28 +0000 (https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/sra https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab # Overwriting timestamp of the input/sra/download.lock ## Prepare input files for SwissLipids @@ -226,89 +214,89 @@ gzip -dc input/swisslipids/lipids2uniprot.tsv.gz > input/swisslipids/lipids2unip # Preserving timestamp of the input/uniprot/download.lock ## Prepare input files for Taxonomy # Checking lock file input/taxonomy/download.lock for download -# Local file time: 2023-12-01 17:28:40 +0900 (input/taxonomy/taxdump.tar.gz) -# Remote file time: 2023-12-08 08:29:50 +0000 (https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz) +# Local file time: 2023-12-08 17:29:50 +0900 (input/taxonomy/taxdump.tar.gz) +# Remote file time: 2023-12-15 08:29:17 +0000 (https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/taxonomy https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz mkdir -p input/taxonomy/taxdump && tar xzf input/taxonomy/taxdump.tar.gz -C input/taxonomy/taxdump/ # Overwriting timestamp of the input/taxonomy/download.lock ### Update TSV for affy_probeset-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/affy_probeset-ncbigene.tsv is newer than config/affy_probeset-ncbigene/config.yaml # File output/tsv/affy_probeset-ncbigene.tsv has no timestamp file -# File output/tsv/affy_probeset-ncbigene.tsv is created 7.000604244924156 days ago (will be updated when >5 days) +# File output/tsv/affy_probeset-ncbigene.tsv is created 7.000742263938229 days ago (will be updated when >5 days) ## Update config/affy_probeset-ncbigene/config.yaml => output/tsv/affy_probeset-ncbigene.tsv -< 2023-12-08T17:49:47 affy_probeset-ncbigene +< 2023-12-15T17:50:52 affy_probeset-ncbigene togoid-config config/affy_probeset-ncbigene update # Success: output/tsv/affy_probeset-ncbigene.tsv is updated -> 2023-12-08T17:49:48 affy_probeset-ncbigene +> 2023-12-15T17:50:53 affy_probeset-ncbigene ### Update TSV for assembly_insdc-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/assembly_insdc-bioproject.tsv is newer than config/assembly_insdc-bioproject/config.yaml # File output/tsv/assembly_insdc-bioproject.tsv has no timestamp file -# File output/tsv/assembly_insdc-bioproject.tsv is created 7.000590471923553 days ago (will be updated when >5 days) +# File output/tsv/assembly_insdc-bioproject.tsv is created 7.0007295191554055 days ago (will be updated when >5 days) ## Update config/assembly_insdc-bioproject/config.yaml => output/tsv/assembly_insdc-bioproject.tsv -< 2023-12-08T17:49:48 assembly_insdc-bioproject +< 2023-12-15T17:50:53 assembly_insdc-bioproject togoid-config config/assembly_insdc-bioproject update # Success: output/tsv/assembly_insdc-bioproject.tsv is updated -> 2023-12-08T17:49:50 assembly_insdc-bioproject +> 2023-12-15T17:50:55 assembly_insdc-bioproject ### Update TSV for assembly_insdc-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/assembly_insdc-biosample.tsv is newer than config/assembly_insdc-biosample/config.yaml # File output/tsv/assembly_insdc-biosample.tsv has no timestamp file -# File output/tsv/assembly_insdc-biosample.tsv is created 7.0005907794320485 days ago (will be updated when >5 days) +# File output/tsv/assembly_insdc-biosample.tsv is created 7.000730063620093 days ago (will be updated when >5 days) ## Update config/assembly_insdc-biosample/config.yaml => output/tsv/assembly_insdc-biosample.tsv -< 2023-12-08T17:49:50 assembly_insdc-biosample +< 2023-12-15T17:50:55 assembly_insdc-biosample togoid-config config/assembly_insdc-biosample update # Success: output/tsv/assembly_insdc-biosample.tsv is updated -> 2023-12-08T17:49:52 assembly_insdc-biosample +> 2023-12-15T17:50:57 assembly_insdc-biosample ### Update TSV for assembly_insdc-insdc_master if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/assembly_insdc-insdc_master.tsv is newer than config/assembly_insdc-insdc_master/config.yaml # File output/tsv/assembly_insdc-insdc_master.tsv has no timestamp file -# File output/tsv/assembly_insdc-insdc_master.tsv is created 7.000589721147592 days ago (will be updated when >5 days) +# File output/tsv/assembly_insdc-insdc_master.tsv is created 7.000726291049352 days ago (will be updated when >5 days) ## Update config/assembly_insdc-insdc_master/config.yaml => output/tsv/assembly_insdc-insdc_master.tsv -< 2023-12-08T17:49:52 assembly_insdc-insdc_master +< 2023-12-15T17:50:57 assembly_insdc-insdc_master togoid-config config/assembly_insdc-insdc_master update # Success: output/tsv/assembly_insdc-insdc_master.tsv is updated -> 2023-12-08T17:49:54 assembly_insdc-insdc_master +> 2023-12-15T17:50:59 assembly_insdc-insdc_master ### Update TSV for bioproject-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject-biosample.tsv is newer than config/bioproject-biosample/config.yaml # File output/tsv/bioproject-biosample.tsv is older than input/bioproject/download.lock ## Update config/bioproject-biosample/config.yaml => output/tsv/bioproject-biosample.tsv -< 2023-12-08T17:49:54 bioproject-biosample +< 2023-12-15T17:50:59 bioproject-biosample togoid-config config/bioproject-biosample update # Success: output/tsv/bioproject-biosample.tsv is updated -> 2023-12-08T17:49:56 bioproject-biosample +> 2023-12-15T17:51:01 bioproject-biosample ### Update TSV for bioproject-geo_series if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject-geo_series.tsv is newer than config/bioproject-geo_series/config.yaml # File output/tsv/bioproject-geo_series.tsv is older than input/bioproject/download.lock ## Update config/bioproject-geo_series/config.yaml => output/tsv/bioproject-geo_series.tsv -< 2023-12-08T17:49:56 bioproject-geo_series +< 2023-12-15T17:51:01 bioproject-geo_series togoid-config config/bioproject-geo_series update # Success: output/tsv/bioproject-geo_series.tsv is updated -> 2023-12-08T17:49:58 bioproject-geo_series +> 2023-12-15T17:51:02 bioproject-geo_series ### Update TSV for bioproject-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject-pubmed.tsv is newer than config/bioproject-pubmed/config.yaml # File output/tsv/bioproject-pubmed.tsv is older than input/bioproject/download.lock ## Update config/bioproject-pubmed/config.yaml => output/tsv/bioproject-pubmed.tsv -< 2023-12-08T17:49:58 bioproject-pubmed +< 2023-12-15T17:51:02 bioproject-pubmed togoid-config config/bioproject-pubmed update # Success: output/tsv/bioproject-pubmed.tsv is updated -> 2023-12-08T17:49:59 bioproject-pubmed +> 2023-12-15T17:51:03 bioproject-pubmed ### Update TSV for bioproject_umbrella-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject_umbrella-bioproject.tsv is newer than config/bioproject_umbrella-bioproject/config.yaml # File output/tsv/bioproject_umbrella-bioproject.tsv has no timestamp file -# File output/tsv/bioproject_umbrella-bioproject.tsv is created 7.000598717593832 days ago (will be updated when >5 days) +# File output/tsv/bioproject_umbrella-bioproject.tsv is created 7.000742371413982 days ago (will be updated when >5 days) ## Update config/bioproject_umbrella-bioproject/config.yaml => output/tsv/bioproject_umbrella-bioproject.tsv -< 2023-12-08T17:49:59 bioproject_umbrella-bioproject +< 2023-12-15T17:51:03 bioproject_umbrella-bioproject togoid-config config/bioproject_umbrella-bioproject update # Success: output/tsv/bioproject_umbrella-bioproject.tsv is updated -> 2023-12-08T17:49:59 bioproject_umbrella-bioproject +> 2023-12-15T17:51:04 bioproject_umbrella-bioproject ### Update TSV for biosample-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/biosample-bioproject.tsv is newer than config/biosample-bioproject/config.yaml # File output/tsv/biosample-bioproject.tsv has no timestamp file -# File output/tsv/biosample-bioproject.tsv is created 7.0005786363534614 days ago (will be updated when >5 days) +# File output/tsv/biosample-bioproject.tsv is created 7.000722393131308 days ago (will be updated when >5 days) ## Update config/biosample-bioproject/config.yaml => output/tsv/biosample-bioproject.tsv -< 2023-12-08T17:49:59 biosample-bioproject +< 2023-12-15T17:51:04 biosample-bioproject togoid-config config/biosample-bioproject update # Success: output/tsv/biosample-bioproject.tsv is updated -> 2023-12-08T17:50:02 biosample-bioproject +> 2023-12-15T17:51:06 biosample-bioproject ### Update TSV for cellosaurus-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/cellosaurus-ncit_disease.tsv is newer than config/cellosaurus-ncit_disease/config.yaml # File output/tsv/cellosaurus-ncit_disease.tsv is newer than input/cellosaurus/download.lock @@ -320,174 +308,174 @@ togoid-config config/biosample-bioproject update ### Update TSV for chebi-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chebi-inchi_key.tsv is newer than config/chebi-inchi_key/config.yaml # File output/tsv/chebi-inchi_key.tsv has no timestamp file -# File output/tsv/chebi-inchi_key.tsv is created 7.000596536290024 days ago (will be updated when >5 days) +# File output/tsv/chebi-inchi_key.tsv is created 7.000741332226829 days ago (will be updated when >5 days) ## Update config/chebi-inchi_key/config.yaml => output/tsv/chebi-inchi_key.tsv -< 2023-12-08T17:50:02 chebi-inchi_key +< 2023-12-15T17:51:06 chebi-inchi_key togoid-config config/chebi-inchi_key update # Success: output/tsv/chebi-inchi_key.tsv is updated -> 2023-12-08T17:50:02 chebi-inchi_key +> 2023-12-15T17:51:07 chebi-inchi_key ### Update TSV for chembl_compound-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-chebi.tsv is newer than config/chembl_compound-chebi/config.yaml # File output/tsv/chembl_compound-chebi.tsv has no timestamp file -# File output/tsv/chembl_compound-chebi.tsv is created 7.000599108623808 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-chebi.tsv is created 7.000743149275544 days ago (will be updated when >5 days) ## Update config/chembl_compound-chebi/config.yaml => output/tsv/chembl_compound-chebi.tsv -< 2023-12-08T17:50:02 chembl_compound-chebi +< 2023-12-15T17:51:07 chembl_compound-chebi togoid-config config/chembl_compound-chebi update # Success: output/tsv/chembl_compound-chebi.tsv is updated -> 2023-12-08T17:50:03 chembl_compound-chebi +> 2023-12-15T17:51:07 chembl_compound-chebi ### Update TSV for chembl_compound-chembl_target if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-chembl_target.tsv is newer than config/chembl_compound-chembl_target/config.yaml # File output/tsv/chembl_compound-chembl_target.tsv has no timestamp file -# File output/tsv/chembl_compound-chembl_target.tsv is created 6.989566349396412 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-chembl_target.tsv is created 6.989579407135822 days ago (will be updated when >5 days) ## Update config/chembl_compound-chembl_target/config.yaml => output/tsv/chembl_compound-chembl_target.tsv -< 2023-12-08T17:50:03 chembl_compound-chembl_target +< 2023-12-15T17:51:07 chembl_compound-chembl_target togoid-config config/chembl_compound-chembl_target update # Success: output/tsv/chembl_compound-chembl_target.tsv is updated -> 2023-12-08T18:06:08 chembl_compound-chembl_target +> 2023-12-15T18:06:51 chembl_compound-chembl_target ### Update TSV for chembl_compound-drugbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-drugbank.tsv is newer than config/chembl_compound-drugbank/config.yaml # File output/tsv/chembl_compound-drugbank.tsv has no timestamp file -# File output/tsv/chembl_compound-drugbank.tsv is created 7.000731277782986 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-drugbank.tsv is created 7.000498770895625 days ago (will be updated when >5 days) ## Update config/chembl_compound-drugbank/config.yaml => output/tsv/chembl_compound-drugbank.tsv -< 2023-12-08T18:06:08 chembl_compound-drugbank +< 2023-12-15T18:06:51 chembl_compound-drugbank togoid-config config/chembl_compound-drugbank update # Success: output/tsv/chembl_compound-drugbank.tsv is updated -> 2023-12-08T18:06:08 chembl_compound-drugbank +> 2023-12-15T18:06:52 chembl_compound-drugbank ### Update TSV for chembl_compound-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-hmdb.tsv is newer than config/chembl_compound-hmdb/config.yaml # File output/tsv/chembl_compound-hmdb.tsv has no timestamp file -# File output/tsv/chembl_compound-hmdb.tsv is created 7.0007294805301274 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-hmdb.tsv is created 7.000501292825798 days ago (will be updated when >5 days) ## Update config/chembl_compound-hmdb/config.yaml => output/tsv/chembl_compound-hmdb.tsv -< 2023-12-08T18:06:08 chembl_compound-hmdb +< 2023-12-15T18:06:52 chembl_compound-hmdb togoid-config config/chembl_compound-hmdb update # Success: output/tsv/chembl_compound-hmdb.tsv is updated -> 2023-12-08T18:06:09 chembl_compound-hmdb +> 2023-12-15T18:06:52 chembl_compound-hmdb ### Update TSV for chembl_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-inchi_key.tsv is newer than config/chembl_compound-inchi_key/config.yaml # File output/tsv/chembl_compound-inchi_key.tsv has no timestamp file -# File output/tsv/chembl_compound-inchi_key.tsv is created 7.000684884456296 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-inchi_key.tsv is created 7.000454322152916 days ago (will be updated when >5 days) ## Update config/chembl_compound-inchi_key/config.yaml => output/tsv/chembl_compound-inchi_key.tsv -< 2023-12-08T18:06:09 chembl_compound-inchi_key +< 2023-12-15T18:06:52 chembl_compound-inchi_key togoid-config config/chembl_compound-inchi_key update # Success: output/tsv/chembl_compound-inchi_key.tsv is updated -> 2023-12-08T18:06:13 chembl_compound-inchi_key +> 2023-12-15T18:06:57 chembl_compound-inchi_key ### Update TSV for chembl_compound-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-mesh.tsv is newer than config/chembl_compound-mesh/config.yaml # File output/tsv/chembl_compound-mesh.tsv has no timestamp file -# File output/tsv/chembl_compound-mesh.tsv is created 7.000731413499966 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-mesh.tsv is created 7.000498933225811 days ago (will be updated when >5 days) ## Update config/chembl_compound-mesh/config.yaml => output/tsv/chembl_compound-mesh.tsv -< 2023-12-08T18:06:13 chembl_compound-mesh +< 2023-12-15T18:06:57 chembl_compound-mesh togoid-config config/chembl_compound-mesh update # Success: output/tsv/chembl_compound-mesh.tsv is updated -> 2023-12-08T18:06:14 chembl_compound-mesh +> 2023-12-15T18:06:57 chembl_compound-mesh ### Update TSV for chembl_compound-pdb_ccd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pdb_ccd.tsv is newer than config/chembl_compound-pdb_ccd/config.yaml # File output/tsv/chembl_compound-pdb_ccd.tsv has no timestamp file -# File output/tsv/chembl_compound-pdb_ccd.tsv is created 7.000733089177974 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-pdb_ccd.tsv is created 7.000500280647431 days ago (will be updated when >5 days) ## Update config/chembl_compound-pdb_ccd/config.yaml => output/tsv/chembl_compound-pdb_ccd.tsv -< 2023-12-08T18:06:14 chembl_compound-pdb_ccd +< 2023-12-15T18:06:57 chembl_compound-pdb_ccd togoid-config config/chembl_compound-pdb_ccd update # Success: output/tsv/chembl_compound-pdb_ccd.tsv is updated -> 2023-12-08T18:06:14 chembl_compound-pdb_ccd +> 2023-12-15T18:06:58 chembl_compound-pdb_ccd ### Update TSV for chembl_compound-pubchem_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pubchem_compound.tsv is newer than config/chembl_compound-pubchem_compound/config.yaml # File output/tsv/chembl_compound-pubchem_compound.tsv has no timestamp file -# File output/tsv/chembl_compound-pubchem_compound.tsv is created 7.000693272700671 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-pubchem_compound.tsv is created 7.000458978936134 days ago (will be updated when >5 days) ## Update config/chembl_compound-pubchem_compound/config.yaml => output/tsv/chembl_compound-pubchem_compound.tsv -< 2023-12-08T18:06:14 chembl_compound-pubchem_compound +< 2023-12-15T18:06:58 chembl_compound-pubchem_compound togoid-config config/chembl_compound-pubchem_compound update # Success: output/tsv/chembl_compound-pubchem_compound.tsv is updated -> 2023-12-08T18:06:18 chembl_compound-pubchem_compound +> 2023-12-15T18:07:02 chembl_compound-pubchem_compound ### Update TSV for chembl_compound-pubchem_substance if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pubchem_substance.tsv is newer than config/chembl_compound-pubchem_substance/config.yaml # File output/tsv/chembl_compound-pubchem_substance.tsv has no timestamp file -# File output/tsv/chembl_compound-pubchem_substance.tsv is created 7.000726705624977 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-pubchem_substance.tsv is created 7.000492712839827 days ago (will be updated when >5 days) ## Update config/chembl_compound-pubchem_substance/config.yaml => output/tsv/chembl_compound-pubchem_substance.tsv -< 2023-12-08T18:06:18 chembl_compound-pubchem_substance +< 2023-12-15T18:07:02 chembl_compound-pubchem_substance togoid-config config/chembl_compound-pubchem_substance update # Success: output/tsv/chembl_compound-pubchem_substance.tsv is updated -> 2023-12-08T18:06:19 chembl_compound-pubchem_substance +> 2023-12-15T18:07:03 chembl_compound-pubchem_substance ### Update TSV for chembl_compound-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pubmed.tsv is newer than config/chembl_compound-pubmed/config.yaml # File output/tsv/chembl_compound-pubmed.tsv has no timestamp file -# File output/tsv/chembl_compound-pubmed.tsv is created 7.000708546050441 days ago (will be updated when >5 days) +# File output/tsv/chembl_compound-pubmed.tsv is created 7.000473525645498 days ago (will be updated when >5 days) ## Update config/chembl_compound-pubmed/config.yaml => output/tsv/chembl_compound-pubmed.tsv -< 2023-12-08T18:06:19 chembl_compound-pubmed +< 2023-12-15T18:07:03 chembl_compound-pubmed togoid-config config/chembl_compound-pubmed update # Success: output/tsv/chembl_compound-pubmed.tsv is updated -> 2023-12-08T18:06:22 chembl_compound-pubmed +> 2023-12-15T18:07:06 chembl_compound-pubmed ### Update TSV for chembl_target-ensembl_gene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true # File output/tsv/chembl_target-ensembl_gene.tsv is older than config/chembl_target-ensembl_gene/config.yaml ## Update config/chembl_target-ensembl_gene/config.yaml => output/tsv/chembl_target-ensembl_gene.tsv -< 2023-12-08T18:06:22 chembl_target-ensembl_gene +< 2023-12-15T18:07:06 chembl_target-ensembl_gene togoid-config config/chembl_target-ensembl_gene update # Error: output/tsv/chembl_target-ensembl_gene.tsv new file size per old 0 / 61845 = 0.0 < 0.5 # Error: Failed to create output/tsv/chembl_target-ensembl_gene.tsv or created file was empty # Failure: output/tsv/chembl_target-ensembl_gene.tsv is not updated -> 2023-12-08T18:06:23 chembl_target-ensembl_gene +> 2023-12-15T18:07:07 chembl_target-ensembl_gene ### Update TSV for chembl_target-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-go.tsv is newer than config/chembl_target-go/config.yaml # File output/tsv/chembl_target-go.tsv has no timestamp file -# File output/tsv/chembl_target-go.tsv is created 7.00073769283073 days ago (will be updated when >5 days) +# File output/tsv/chembl_target-go.tsv is created 7.000503447946285 days ago (will be updated when >5 days) ## Update config/chembl_target-go/config.yaml => output/tsv/chembl_target-go.tsv -< 2023-12-08T18:06:23 chembl_target-go +< 2023-12-15T18:07:07 chembl_target-go togoid-config config/chembl_target-go update # Success: output/tsv/chembl_target-go.tsv is updated -> 2023-12-08T18:06:23 chembl_target-go +> 2023-12-15T18:07:07 chembl_target-go ### Update TSV for chembl_target-interpro if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-interpro.tsv is newer than config/chembl_target-interpro/config.yaml # File output/tsv/chembl_target-interpro.tsv has no timestamp file -# File output/tsv/chembl_target-interpro.tsv is created 7.000738048368577 days ago (will be updated when >5 days) +# File output/tsv/chembl_target-interpro.tsv is created 7.000503375759282 days ago (will be updated when >5 days) ## Update config/chembl_target-interpro/config.yaml => output/tsv/chembl_target-interpro.tsv -< 2023-12-08T18:06:23 chembl_target-interpro +< 2023-12-15T18:07:07 chembl_target-interpro togoid-config config/chembl_target-interpro update # Success: output/tsv/chembl_target-interpro.tsv is updated -> 2023-12-08T18:06:24 chembl_target-interpro +> 2023-12-15T18:07:08 chembl_target-interpro ### Update TSV for chembl_target-pdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-pdb.tsv is newer than config/chembl_target-pdb/config.yaml # File output/tsv/chembl_target-pdb.tsv has no timestamp file -# File output/tsv/chembl_target-pdb.tsv is created 7.000737610992743 days ago (will be updated when >5 days) +# File output/tsv/chembl_target-pdb.tsv is created 7.000503399944746 days ago (will be updated when >5 days) ## Update config/chembl_target-pdb/config.yaml => output/tsv/chembl_target-pdb.tsv -< 2023-12-08T18:06:24 chembl_target-pdb +< 2023-12-15T18:07:08 chembl_target-pdb togoid-config config/chembl_target-pdb update # Success: output/tsv/chembl_target-pdb.tsv is updated -> 2023-12-08T18:06:24 chembl_target-pdb +> 2023-12-15T18:07:08 chembl_target-pdb ### Update TSV for chembl_target-pfam if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-pfam.tsv is newer than config/chembl_target-pfam/config.yaml # File output/tsv/chembl_target-pfam.tsv has no timestamp file -# File output/tsv/chembl_target-pfam.tsv is created 7.000737769559364 days ago (will be updated when >5 days) +# File output/tsv/chembl_target-pfam.tsv is created 7.000503891385323 days ago (will be updated when >5 days) ## Update config/chembl_target-pfam/config.yaml => output/tsv/chembl_target-pfam.tsv -< 2023-12-08T18:06:24 chembl_target-pfam +< 2023-12-15T18:07:08 chembl_target-pfam togoid-config config/chembl_target-pfam update # Success: output/tsv/chembl_target-pfam.tsv is updated -> 2023-12-08T18:06:24 chembl_target-pfam +> 2023-12-15T18:07:08 chembl_target-pfam ### Update TSV for chembl_target-reactome_pathway if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-reactome_pathway.tsv is newer than config/chembl_target-reactome_pathway/config.yaml # File output/tsv/chembl_target-reactome_pathway.tsv has no timestamp file -# File output/tsv/chembl_target-reactome_pathway.tsv is created 7.000737507698414 days ago (will be updated when >5 days) +# File output/tsv/chembl_target-reactome_pathway.tsv is created 7.000504260498206 days ago (will be updated when >5 days) ## Update config/chembl_target-reactome_pathway/config.yaml => output/tsv/chembl_target-reactome_pathway.tsv -< 2023-12-08T18:06:24 chembl_target-reactome_pathway +< 2023-12-15T18:07:08 chembl_target-reactome_pathway togoid-config config/chembl_target-reactome_pathway update # Success: output/tsv/chembl_target-reactome_pathway.tsv is updated -> 2023-12-08T18:06:25 chembl_target-reactome_pathway +> 2023-12-15T18:07:09 chembl_target-reactome_pathway ### Update TSV for chembl_target-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-uniprot.tsv is newer than config/chembl_target-uniprot/config.yaml # File output/tsv/chembl_target-uniprot.tsv has no timestamp file -# File output/tsv/chembl_target-uniprot.tsv is created 7.000645732627002 days ago (will be updated when >5 days) +# File output/tsv/chembl_target-uniprot.tsv is created 7.000400527719572 days ago (will be updated when >5 days) ## Update config/chembl_target-uniprot/config.yaml => output/tsv/chembl_target-uniprot.tsv -< 2023-12-08T18:06:25 chembl_target-uniprot +< 2023-12-15T18:07:09 chembl_target-uniprot togoid-config config/chembl_target-uniprot update # Success: output/tsv/chembl_target-uniprot.tsv is updated -> 2023-12-08T18:06:34 chembl_target-uniprot +> 2023-12-15T18:07:17 chembl_target-uniprot ### Update TSV for clinvar-medgen if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/clinvar-medgen.tsv is newer than config/clinvar-medgen/config.yaml # File output/tsv/clinvar-medgen.tsv has no timestamp file -# File output/tsv/clinvar-medgen.tsv is created 7.000741662147732 days ago (will be updated when >5 days) +# File output/tsv/clinvar-medgen.tsv is created 7.000483188387905 days ago (will be updated when >5 days) ## Update config/clinvar-medgen/config.yaml => output/tsv/clinvar-medgen.tsv -< 2023-12-08T18:06:34 clinvar-medgen +< 2023-12-15T18:07:17 clinvar-medgen togoid-config config/clinvar-medgen update # Success: output/tsv/clinvar-medgen.tsv is updated -> 2023-12-08T18:06:35 clinvar-medgen +> 2023-12-15T18:07:18 clinvar-medgen ### Update TSV for cog-insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/cog-insdc.tsv is newer than config/cog-insdc/config.yaml # File output/tsv/cog-insdc.tsv is newer than input/cog/download.lock @@ -499,300 +487,300 @@ togoid-config config/clinvar-medgen update ### Update TSV for doid-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/doid-mesh.tsv is newer than config/doid-mesh/config.yaml # File output/tsv/doid-mesh.tsv has no timestamp file -# File output/tsv/doid-mesh.tsv is created 7.000749577308657 days ago (will be updated when >5 days) +# File output/tsv/doid-mesh.tsv is created 7.000491996464341 days ago (will be updated when >5 days) ## Update config/doid-mesh/config.yaml => output/tsv/doid-mesh.tsv -< 2023-12-08T18:06:35 doid-mesh +< 2023-12-15T18:07:18 doid-mesh togoid-config config/doid-mesh update # Success: output/tsv/doid-mesh.tsv is updated -> 2023-12-08T18:06:36 doid-mesh +> 2023-12-15T18:07:19 doid-mesh ### Update TSV for doid-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/doid-ncit_disease.tsv is newer than config/doid-ncit_disease/config.yaml # File output/tsv/doid-ncit_disease.tsv has no timestamp file -# File output/tsv/doid-ncit_disease.tsv is created 7.000749776298889 days ago (will be updated when >5 days) +# File output/tsv/doid-ncit_disease.tsv is created 7.00049228218147 days ago (will be updated when >5 days) ## Update config/doid-ncit_disease/config.yaml => output/tsv/doid-ncit_disease.tsv -< 2023-12-08T18:06:36 doid-ncit_disease +< 2023-12-15T18:07:19 doid-ncit_disease togoid-config config/doid-ncit_disease update # Success: output/tsv/doid-ncit_disease.tsv is updated -> 2023-12-08T18:06:36 doid-ncit_disease +> 2023-12-15T18:07:19 doid-ncit_disease ### Update TSV for doid-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/doid-omim_phenotype.tsv is newer than config/doid-omim_phenotype/config.yaml # File output/tsv/doid-omim_phenotype.tsv has no timestamp file -# File output/tsv/doid-omim_phenotype.tsv is created 7.000749799049005 days ago (will be updated when >5 days) +# File output/tsv/doid-omim_phenotype.tsv is created 7.0004929238605325 days ago (will be updated when >5 days) ## Update config/doid-omim_phenotype/config.yaml => output/tsv/doid-omim_phenotype.tsv -< 2023-12-08T18:06:36 doid-omim_phenotype +< 2023-12-15T18:07:19 doid-omim_phenotype togoid-config config/doid-omim_phenotype update # Success: output/tsv/doid-omim_phenotype.tsv is updated -> 2023-12-08T18:06:37 doid-omim_phenotype +> 2023-12-15T18:07:20 doid-omim_phenotype ### Update TSV for ensembl_gene-affy_probeset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-affy_probeset.tsv is newer than config/ensembl_gene-affy_probeset/config.yaml # File output/tsv/ensembl_gene-affy_probeset.tsv has no timestamp file -# File output/tsv/ensembl_gene-affy_probeset.tsv is created 6.99986998562934 days ago (will be updated when >5 days) +# File output/tsv/ensembl_gene-affy_probeset.tsv is created 7.000073638502604 days ago (will be updated when >5 days) ## Update config/ensembl_gene-affy_probeset/config.yaml => output/tsv/ensembl_gene-affy_probeset.tsv -< 2023-12-08T18:06:37 ensembl_gene-affy_probeset +< 2023-12-15T18:07:20 ensembl_gene-affy_probeset togoid-config config/ensembl_gene-affy_probeset update # Success: output/tsv/ensembl_gene-affy_probeset.tsv is updated -> 2023-12-08T18:07:13 ensembl_gene-affy_probeset +> 2023-12-15T18:08:34 ensembl_gene-affy_probeset ### Update TSV for ensembl_gene-ensembl_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-ensembl_protein.tsv is newer than config/ensembl_gene-ensembl_protein/config.yaml # File output/tsv/ensembl_gene-ensembl_protein.tsv has no timestamp file -# File output/tsv/ensembl_gene-ensembl_protein.tsv is created 6.999053551238356 days ago (will be updated when >5 days) +# File output/tsv/ensembl_gene-ensembl_protein.tsv is created 6.999589636758125 days ago (will be updated when >5 days) ## Update config/ensembl_gene-ensembl_protein/config.yaml => output/tsv/ensembl_gene-ensembl_protein.tsv -< 2023-12-08T18:07:13 ensembl_gene-ensembl_protein +< 2023-12-15T18:08:34 ensembl_gene-ensembl_protein togoid-config config/ensembl_gene-ensembl_protein update # Success: output/tsv/ensembl_gene-ensembl_protein.tsv is updated -> 2023-12-08T18:09:10 ensembl_gene-ensembl_protein +> 2023-12-15T18:10:34 ensembl_gene-ensembl_protein ### Update TSV for ensembl_gene-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-ensembl_transcript.tsv is newer than config/ensembl_gene-ensembl_transcript/config.yaml # File output/tsv/ensembl_gene-ensembl_transcript.tsv has no timestamp file -# File output/tsv/ensembl_gene-ensembl_transcript.tsv is created 6.999010600466712 days ago (will be updated when >5 days) +# File output/tsv/ensembl_gene-ensembl_transcript.tsv is created 6.999524868263634 days ago (will be updated when >5 days) ## Update config/ensembl_gene-ensembl_transcript/config.yaml => output/tsv/ensembl_gene-ensembl_transcript.tsv -< 2023-12-08T18:09:10 ensembl_gene-ensembl_transcript +< 2023-12-15T18:10:34 ensembl_gene-ensembl_transcript togoid-config config/ensembl_gene-ensembl_transcript update # Success: output/tsv/ensembl_gene-ensembl_transcript.tsv is updated -> 2023-12-08T18:11:15 ensembl_gene-ensembl_transcript +> 2023-12-15T18:13:04 ensembl_gene-ensembl_transcript ### Update TSV for ensembl_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-hgnc.tsv is newer than config/ensembl_gene-hgnc/config.yaml # File output/tsv/ensembl_gene-hgnc.tsv has no timestamp file -# File output/tsv/ensembl_gene-hgnc.tsv is created 7.00045095873045 days ago (will be updated when >5 days) +# File output/tsv/ensembl_gene-hgnc.tsv is created 7.001256019889688 days ago (will be updated when >5 days) ## Update config/ensembl_gene-hgnc/config.yaml => output/tsv/ensembl_gene-hgnc.tsv -< 2023-12-08T18:11:15 ensembl_gene-hgnc +< 2023-12-15T18:13:04 ensembl_gene-hgnc togoid-config config/ensembl_gene-hgnc update # Success: output/tsv/ensembl_gene-hgnc.tsv is updated -> 2023-12-08T18:11:15 ensembl_gene-hgnc +> 2023-12-15T18:13:04 ensembl_gene-hgnc ### Update TSV for ensembl_gene-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-ncbigene.tsv is newer than config/ensembl_gene-ncbigene/config.yaml # File output/tsv/ensembl_gene-ncbigene.tsv has no timestamp file -# File output/tsv/ensembl_gene-ncbigene.tsv is created 6.999517830379479 days ago (will be updated when >5 days) +# File output/tsv/ensembl_gene-ncbigene.tsv is created 7.000257419081261 days ago (will be updated when >5 days) ## Update config/ensembl_gene-ncbigene/config.yaml => output/tsv/ensembl_gene-ncbigene.tsv -< 2023-12-08T18:11:15 ensembl_gene-ncbigene +< 2023-12-15T18:13:04 ensembl_gene-ncbigene togoid-config config/ensembl_gene-ncbigene update # Success: output/tsv/ensembl_gene-ncbigene.tsv is updated -> 2023-12-08T18:12:42 ensembl_gene-ncbigene +> 2023-12-15T18:14:28 ensembl_gene-ncbigene ### Update TSV for ensembl_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-uniprot.tsv is newer than config/ensembl_gene-uniprot/config.yaml # File output/tsv/ensembl_gene-uniprot.tsv has no timestamp file -# File output/tsv/ensembl_gene-uniprot.tsv is created 6.998808924289826 days ago (will be updated when >5 days) +# File output/tsv/ensembl_gene-uniprot.tsv is created 7.000274580742442 days ago (will be updated when >5 days) ## Update config/ensembl_gene-uniprot/config.yaml => output/tsv/ensembl_gene-uniprot.tsv -< 2023-12-08T18:12:42 ensembl_gene-uniprot +< 2023-12-15T18:14:28 ensembl_gene-uniprot togoid-config config/ensembl_gene-uniprot update # Success: output/tsv/ensembl_gene-uniprot.tsv is updated -> 2023-12-08T18:14:04 ensembl_gene-uniprot +> 2023-12-15T18:15:49 ensembl_gene-uniprot ### Update TSV for ensembl_protein-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_protein-ensembl_transcript.tsv is newer than config/ensembl_protein-ensembl_transcript/config.yaml # File output/tsv/ensembl_protein-ensembl_transcript.tsv has no timestamp file -# File output/tsv/ensembl_protein-ensembl_transcript.tsv is created 6.991345023277951 days ago (will be updated when >5 days) +# File output/tsv/ensembl_protein-ensembl_transcript.tsv is created 6.999919660876585 days ago (will be updated when >5 days) ## Update config/ensembl_protein-ensembl_transcript/config.yaml => output/tsv/ensembl_protein-ensembl_transcript.tsv -< 2023-12-08T18:14:04 ensembl_protein-ensembl_transcript +< 2023-12-15T18:15:49 ensembl_protein-ensembl_transcript togoid-config config/ensembl_protein-ensembl_transcript update # Success: output/tsv/ensembl_protein-ensembl_transcript.tsv is updated -> 2023-12-08T18:15:56 ensembl_protein-ensembl_transcript +> 2023-12-15T18:17:40 ensembl_protein-ensembl_transcript ### Update TSV for ensembl_transcript-affy_probeset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_transcript-affy_probeset.tsv is newer than config/ensembl_transcript-affy_probeset/config.yaml # File output/tsv/ensembl_transcript-affy_probeset.tsv has no timestamp file -# File output/tsv/ensembl_transcript-affy_probeset.tsv is created 6.991789643432801 days ago (will be updated when >5 days) +# File output/tsv/ensembl_transcript-affy_probeset.tsv is created 7.000757556550312 days ago (will be updated when >5 days) ## Update config/ensembl_transcript-affy_probeset/config.yaml => output/tsv/ensembl_transcript-affy_probeset.tsv -< 2023-12-08T18:15:56 ensembl_transcript-affy_probeset +< 2023-12-15T18:17:40 ensembl_transcript-affy_probeset togoid-config config/ensembl_transcript-affy_probeset update # Success: output/tsv/ensembl_transcript-affy_probeset.tsv is updated -> 2023-12-08T18:16:34 ensembl_transcript-affy_probeset +> 2023-12-15T18:18:47 ensembl_transcript-affy_probeset ### Update TSV for ensembl_transcript-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_transcript-go.tsv is newer than config/ensembl_transcript-go/config.yaml # File output/tsv/ensembl_transcript-go.tsv has no timestamp file -# File output/tsv/ensembl_transcript-go.tsv is created 6.684187016031538 days ago (will be updated when >5 days) +# File output/tsv/ensembl_transcript-go.tsv is created 6.998813901050359 days ago (will be updated when >5 days) ## Update config/ensembl_transcript-go/config.yaml => output/tsv/ensembl_transcript-go.tsv -< 2023-12-08T18:16:34 ensembl_transcript-go +< 2023-12-15T18:18:47 ensembl_transcript-go togoid-config config/ensembl_transcript-go update # Success: output/tsv/ensembl_transcript-go.tsv is updated -> 2023-12-08T18:20:30 ensembl_transcript-go +> 2023-12-15T18:22:41 ensembl_transcript-go ### Update TSV for ensembl_transcript-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_transcript-hgnc.tsv is newer than config/ensembl_transcript-hgnc/config.yaml # File output/tsv/ensembl_transcript-hgnc.tsv has no timestamp file -# File output/tsv/ensembl_transcript-hgnc.tsv is created 6.686840734819467 days ago (will be updated when >5 days) +# File output/tsv/ensembl_transcript-hgnc.tsv is created 7.001511505207152 days ago (will be updated when >5 days) ## Update config/ensembl_transcript-hgnc/config.yaml => output/tsv/ensembl_transcript-hgnc.tsv -< 2023-12-08T18:20:30 ensembl_transcript-hgnc +< 2023-12-15T18:22:41 ensembl_transcript-hgnc togoid-config config/ensembl_transcript-hgnc update # Success: output/tsv/ensembl_transcript-hgnc.tsv is updated -> 2023-12-08T18:20:30 ensembl_transcript-hgnc +> 2023-12-15T18:22:42 ensembl_transcript-hgnc ### Update TSV for ensembl_transcript-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_transcript-refseq_rna.tsv is newer than config/ensembl_transcript-refseq_rna/config.yaml # File output/tsv/ensembl_transcript-refseq_rna.tsv has no timestamp file -# File output/tsv/ensembl_transcript-refseq_rna.tsv is created 6.6770171949111115 days ago (will be updated when >5 days) +# File output/tsv/ensembl_transcript-refseq_rna.tsv is created 7.000394484945903 days ago (will be updated when >5 days) ## Update config/ensembl_transcript-refseq_rna/config.yaml => output/tsv/ensembl_transcript-refseq_rna.tsv -< 2023-12-08T18:20:30 ensembl_transcript-refseq_rna +< 2023-12-15T18:22:42 ensembl_transcript-refseq_rna togoid-config config/ensembl_transcript-refseq_rna update # Success: output/tsv/ensembl_transcript-refseq_rna.tsv is updated -> 2023-12-08T18:22:08 ensembl_transcript-refseq_rna +> 2023-12-15T18:24:17 ensembl_transcript-refseq_rna ### Update TSV for gea-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/gea-bioproject.tsv is newer than config/gea-bioproject/config.yaml # File output/tsv/gea-bioproject.tsv has no timestamp file -# File output/tsv/gea-bioproject.tsv is created 6.6781361737875 days ago (will be updated when >5 days) +# File output/tsv/gea-bioproject.tsv is created 7.001495503364236 days ago (will be updated when >5 days) ## Update config/gea-bioproject/config.yaml => output/tsv/gea-bioproject.tsv -< 2023-12-08T18:22:08 gea-bioproject +< 2023-12-15T18:24:17 gea-bioproject togoid-config config/gea-bioproject update # Success: output/tsv/gea-bioproject.tsv is updated -> 2023-12-08T18:22:08 gea-bioproject +> 2023-12-15T18:24:18 gea-bioproject ### Update TSV for gea-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/gea-biosample.tsv is newer than config/gea-biosample/config.yaml # File output/tsv/gea-biosample.tsv has no timestamp file -# File output/tsv/gea-biosample.tsv is created 6.678136262817558 days ago (will be updated when >5 days) +# File output/tsv/gea-biosample.tsv is created 7.0014950978947565 days ago (will be updated when >5 days) ## Update config/gea-biosample/config.yaml => output/tsv/gea-biosample.tsv -< 2023-12-08T18:22:08 gea-biosample +< 2023-12-15T18:24:18 gea-biosample togoid-config config/gea-biosample update # Success: output/tsv/gea-biosample.tsv is updated -> 2023-12-08T18:22:09 gea-biosample +> 2023-12-15T18:24:18 gea-biosample ### Update TSV for glytoucan-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/glytoucan-doid.tsv is newer than config/glytoucan-doid/config.yaml # File output/tsv/glytoucan-doid.tsv has no timestamp file -# File output/tsv/glytoucan-doid.tsv is created 11.304873545088483 days ago (will be updated when >5 days) +# File output/tsv/glytoucan-doid.tsv is created 7.001420088858426 days ago (will be updated when >5 days) ## Update config/glytoucan-doid/config.yaml => output/tsv/glytoucan-doid.tsv -< 2023-12-08T18:22:09 glytoucan-doid +< 2023-12-15T18:24:18 glytoucan-doid togoid-config config/glytoucan-doid update # Success: output/tsv/glytoucan-doid.tsv is updated -> 2023-12-08T18:22:16 glytoucan-doid +> 2023-12-15T18:24:25 glytoucan-doid ### Update TSV for glytoucan-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/glytoucan-ncbigene.tsv is newer than config/glytoucan-ncbigene/config.yaml # File output/tsv/glytoucan-ncbigene.tsv has no timestamp file -# File output/tsv/glytoucan-ncbigene.tsv is created 11.304947157234293 days ago (will be updated when >5 days) +# File output/tsv/glytoucan-ncbigene.tsv is created 7.001490046615591 days ago (will be updated when >5 days) ## Update config/glytoucan-ncbigene/config.yaml => output/tsv/glytoucan-ncbigene.tsv -< 2023-12-08T18:22:16 glytoucan-ncbigene +< 2023-12-15T18:24:25 glytoucan-ncbigene togoid-config config/glytoucan-ncbigene update # Success: output/tsv/glytoucan-ncbigene.tsv is updated -> 2023-12-08T18:22:17 glytoucan-ncbigene +> 2023-12-15T18:24:26 glytoucan-ncbigene ### Update TSV for glytoucan-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/glytoucan-uniprot.tsv is newer than config/glytoucan-uniprot/config.yaml # File output/tsv/glytoucan-uniprot.tsv has no timestamp file -# File output/tsv/glytoucan-uniprot.tsv is created 11.304941404534617 days ago (will be updated when >5 days) +# File output/tsv/glytoucan-uniprot.tsv is created 7.001484768801979 days ago (will be updated when >5 days) ## Update config/glytoucan-uniprot/config.yaml => output/tsv/glytoucan-uniprot.tsv -< 2023-12-08T18:22:17 glytoucan-uniprot +< 2023-12-15T18:24:26 glytoucan-uniprot togoid-config config/glytoucan-uniprot update # Success: output/tsv/glytoucan-uniprot.tsv is updated -> 2023-12-08T18:22:18 glytoucan-uniprot +> 2023-12-15T18:24:28 glytoucan-uniprot ### Update TSV for hgnc-ccds if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ccds.tsv is newer than config/hgnc-ccds/config.yaml # File output/tsv/hgnc-ccds.tsv has no timestamp file -# File output/tsv/hgnc-ccds.tsv is created 6.6782387979156015 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ccds.tsv is created 7.001494902935486 days ago (will be updated when >5 days) ## Update config/hgnc-ccds/config.yaml => output/tsv/hgnc-ccds.tsv -< 2023-12-08T18:22:18 hgnc-ccds +< 2023-12-15T18:24:28 hgnc-ccds togoid-config config/hgnc-ccds update # Success: output/tsv/hgnc-ccds.tsv is updated -> 2023-12-08T18:22:18 hgnc-ccds +> 2023-12-15T18:24:28 hgnc-ccds ### Update TSV for hgnc-ec if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ec.tsv is newer than config/hgnc-ec/config.yaml # File output/tsv/hgnc-ec.tsv has no timestamp file -# File output/tsv/hgnc-ec.tsv is created 6.678239668377952 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ec.tsv is created 7.001495920990683 days ago (will be updated when >5 days) ## Update config/hgnc-ec/config.yaml => output/tsv/hgnc-ec.tsv -< 2023-12-08T18:22:18 hgnc-ec +< 2023-12-15T18:24:28 hgnc-ec togoid-config config/hgnc-ec update # Success: output/tsv/hgnc-ec.tsv is updated -> 2023-12-08T18:22:19 hgnc-ec +> 2023-12-15T18:24:29 hgnc-ec ### Update TSV for hgnc-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ensembl_gene.tsv is newer than config/hgnc-ensembl_gene/config.yaml # File output/tsv/hgnc-ensembl_gene.tsv has no timestamp file -# File output/tsv/hgnc-ensembl_gene.tsv is created 6.678229795052767 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ensembl_gene.tsv is created 7.00149488924573 days ago (will be updated when >5 days) ## Update config/hgnc-ensembl_gene/config.yaml => output/tsv/hgnc-ensembl_gene.tsv -< 2023-12-08T18:22:19 hgnc-ensembl_gene +< 2023-12-15T18:24:29 hgnc-ensembl_gene togoid-config config/hgnc-ensembl_gene update # Success: output/tsv/hgnc-ensembl_gene.tsv is updated -> 2023-12-08T18:22:19 hgnc-ensembl_gene +> 2023-12-15T18:24:29 hgnc-ensembl_gene ### Update TSV for hgnc-hgnc_symbol if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-hgnc_symbol.tsv is newer than config/hgnc-hgnc_symbol/config.yaml # File output/tsv/hgnc-hgnc_symbol.tsv has no timestamp file -# File output/tsv/hgnc-hgnc_symbol.tsv is created 6.678226636421319 days ago (will be updated when >5 days) +# File output/tsv/hgnc-hgnc_symbol.tsv is created 7.0014945714681245 days ago (will be updated when >5 days) ## Update config/hgnc-hgnc_symbol/config.yaml => output/tsv/hgnc-hgnc_symbol.tsv -< 2023-12-08T18:22:19 hgnc-hgnc_symbol +< 2023-12-15T18:24:29 hgnc-hgnc_symbol togoid-config config/hgnc-hgnc_symbol update # Success: output/tsv/hgnc-hgnc_symbol.tsv is updated -> 2023-12-08T18:22:20 hgnc-hgnc_symbol +> 2023-12-15T18:24:29 hgnc-hgnc_symbol ### Update TSV for hgnc-insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-insdc.tsv is newer than config/hgnc-insdc/config.yaml # File output/tsv/hgnc-insdc.tsv has no timestamp file -# File output/tsv/hgnc-insdc.tsv is created 6.678224508556342 days ago (will be updated when >5 days) +# File output/tsv/hgnc-insdc.tsv is created 7.001495355237685 days ago (will be updated when >5 days) ## Update config/hgnc-insdc/config.yaml => output/tsv/hgnc-insdc.tsv -< 2023-12-08T18:22:20 hgnc-insdc +< 2023-12-15T18:24:29 hgnc-insdc togoid-config config/hgnc-insdc update # Success: output/tsv/hgnc-insdc.tsv is updated -> 2023-12-08T18:22:20 hgnc-insdc +> 2023-12-15T18:24:30 hgnc-insdc ### Update TSV for hgnc-lrg if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-lrg.tsv is newer than config/hgnc-lrg/config.yaml # File output/tsv/hgnc-lrg.tsv has no timestamp file -# File output/tsv/hgnc-lrg.tsv is created 6.678224955773519 days ago (will be updated when >5 days) +# File output/tsv/hgnc-lrg.tsv is created 7.001496092940359 days ago (will be updated when >5 days) ## Update config/hgnc-lrg/config.yaml => output/tsv/hgnc-lrg.tsv -< 2023-12-08T18:22:20 hgnc-lrg +< 2023-12-15T18:24:30 hgnc-lrg togoid-config config/hgnc-lrg update # Success: output/tsv/hgnc-lrg.tsv is updated -> 2023-12-08T18:22:21 hgnc-lrg +> 2023-12-15T18:24:30 hgnc-lrg ### Update TSV for hgnc-mgi_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-mgi_gene.tsv is newer than config/hgnc-mgi_gene/config.yaml # File output/tsv/hgnc-mgi_gene.tsv has no timestamp file -# File output/tsv/hgnc-mgi_gene.tsv is created 6.678221950471215 days ago (will be updated when >5 days) +# File output/tsv/hgnc-mgi_gene.tsv is created 7.00149580391647 days ago (will be updated when >5 days) ## Update config/hgnc-mgi_gene/config.yaml => output/tsv/hgnc-mgi_gene.tsv -< 2023-12-08T18:22:21 hgnc-mgi_gene +< 2023-12-15T18:24:30 hgnc-mgi_gene togoid-config config/hgnc-mgi_gene update # Success: output/tsv/hgnc-mgi_gene.tsv is updated -> 2023-12-08T18:22:21 hgnc-mgi_gene +> 2023-12-15T18:24:31 hgnc-mgi_gene ### Update TSV for hgnc-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-mirbase.tsv is newer than config/hgnc-mirbase/config.yaml # File output/tsv/hgnc-mirbase.tsv has no timestamp file -# File output/tsv/hgnc-mirbase.tsv is created 6.678222126153484 days ago (will be updated when >5 days) +# File output/tsv/hgnc-mirbase.tsv is created 7.00149716651051 days ago (will be updated when >5 days) ## Update config/hgnc-mirbase/config.yaml => output/tsv/hgnc-mirbase.tsv -< 2023-12-08T18:22:21 hgnc-mirbase +< 2023-12-15T18:24:31 hgnc-mirbase togoid-config config/hgnc-mirbase update # Success: output/tsv/hgnc-mirbase.tsv is updated -> 2023-12-08T18:22:22 hgnc-mirbase +> 2023-12-15T18:24:31 hgnc-mirbase ### Update TSV for hgnc-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ncbigene.tsv is newer than config/hgnc-ncbigene/config.yaml # File output/tsv/hgnc-ncbigene.tsv has no timestamp file -# File output/tsv/hgnc-ncbigene.tsv is created 6.678214998222917 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ncbigene.tsv is created 7.001496598491737 days ago (will be updated when >5 days) ## Update config/hgnc-ncbigene/config.yaml => output/tsv/hgnc-ncbigene.tsv -< 2023-12-08T18:22:22 hgnc-ncbigene +< 2023-12-15T18:24:31 hgnc-ncbigene togoid-config config/hgnc-ncbigene update # Success: output/tsv/hgnc-ncbigene.tsv is updated -> 2023-12-08T18:22:22 hgnc-ncbigene +> 2023-12-15T18:24:32 hgnc-ncbigene ### Update TSV for hgnc-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-omim_gene.tsv is newer than config/hgnc-omim_gene/config.yaml # File output/tsv/hgnc-omim_gene.tsv has no timestamp file -# File output/tsv/hgnc-omim_gene.tsv is created 6.678213006012107 days ago (will be updated when >5 days) +# File output/tsv/hgnc-omim_gene.tsv is created 7.001496771569422 days ago (will be updated when >5 days) ## Update config/hgnc-omim_gene/config.yaml => output/tsv/hgnc-omim_gene.tsv -< 2023-12-08T18:22:22 hgnc-omim_gene +< 2023-12-15T18:24:32 hgnc-omim_gene togoid-config config/hgnc-omim_gene update # Success: output/tsv/hgnc-omim_gene.tsv is updated -> 2023-12-08T18:22:23 hgnc-omim_gene +> 2023-12-15T18:24:32 hgnc-omim_gene ### Update TSV for hgnc-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-pubmed.tsv is newer than config/hgnc-pubmed/config.yaml # File output/tsv/hgnc-pubmed.tsv has no timestamp file -# File output/tsv/hgnc-pubmed.tsv is created 6.678208376593924 days ago (will be updated when >5 days) +# File output/tsv/hgnc-pubmed.tsv is created 7.001496198261829 days ago (will be updated when >5 days) ## Update config/hgnc-pubmed/config.yaml => output/tsv/hgnc-pubmed.tsv -< 2023-12-08T18:22:23 hgnc-pubmed +< 2023-12-15T18:24:32 hgnc-pubmed togoid-config config/hgnc-pubmed update # Success: output/tsv/hgnc-pubmed.tsv is updated -> 2023-12-08T18:22:23 hgnc-pubmed +> 2023-12-15T18:24:33 hgnc-pubmed ### Update TSV for hgnc-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-refseq_rna.tsv is newer than config/hgnc-refseq_rna/config.yaml # File output/tsv/hgnc-refseq_rna.tsv has no timestamp file -# File output/tsv/hgnc-refseq_rna.tsv is created 6.678204815425035 days ago (will be updated when >5 days) +# File output/tsv/hgnc-refseq_rna.tsv is created 7.001493558930741 days ago (will be updated when >5 days) ## Update config/hgnc-refseq_rna/config.yaml => output/tsv/hgnc-refseq_rna.tsv -< 2023-12-08T18:22:23 hgnc-refseq_rna +< 2023-12-15T18:24:33 hgnc-refseq_rna togoid-config config/hgnc-refseq_rna update # Success: output/tsv/hgnc-refseq_rna.tsv is updated -> 2023-12-08T18:22:24 hgnc-refseq_rna +> 2023-12-15T18:24:33 hgnc-refseq_rna ### Update TSV for hgnc-rgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-rgd.tsv is newer than config/hgnc-rgd/config.yaml # File output/tsv/hgnc-rgd.tsv has no timestamp file -# File output/tsv/hgnc-rgd.tsv is created 6.678206984074179 days ago (will be updated when >5 days) +# File output/tsv/hgnc-rgd.tsv is created 7.001493733897731 days ago (will be updated when >5 days) ## Update config/hgnc-rgd/config.yaml => output/tsv/hgnc-rgd.tsv -< 2023-12-08T18:22:24 hgnc-rgd +< 2023-12-15T18:24:33 hgnc-rgd togoid-config config/hgnc-rgd update # Success: output/tsv/hgnc-rgd.tsv is updated -> 2023-12-08T18:22:24 hgnc-rgd +> 2023-12-15T18:24:34 hgnc-rgd ### Update TSV for hgnc-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-uniprot.tsv is newer than config/hgnc-uniprot/config.yaml # File output/tsv/hgnc-uniprot.tsv has no timestamp file -# File output/tsv/hgnc-uniprot.tsv is created 6.678205701043958 days ago (will be updated when >5 days) +# File output/tsv/hgnc-uniprot.tsv is created 7.0014941489539355 days ago (will be updated when >5 days) ## Update config/hgnc-uniprot/config.yaml => output/tsv/hgnc-uniprot.tsv -< 2023-12-08T18:22:24 hgnc-uniprot +< 2023-12-15T18:24:34 hgnc-uniprot togoid-config config/hgnc-uniprot update # Success: output/tsv/hgnc-uniprot.tsv is updated -> 2023-12-08T18:22:25 hgnc-uniprot +> 2023-12-15T18:24:34 hgnc-uniprot ### Update TSV for hmdb-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/hmdb-chebi.tsv is newer than config/hmdb-chebi/config.yaml # File output/tsv/hmdb-chebi.tsv is newer than input/hmdb/download.lock @@ -816,12 +804,12 @@ togoid-config config/hgnc-uniprot update ### Update TSV for hp_inheritance-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hp_inheritance-omim_phenotype.tsv is newer than config/hp_inheritance-omim_phenotype/config.yaml # File output/tsv/hp_inheritance-omim_phenotype.tsv has no timestamp file -# File output/tsv/hp_inheritance-omim_phenotype.tsv is created 6.6781991341371985 days ago (will be updated when >5 days) +# File output/tsv/hp_inheritance-omim_phenotype.tsv is created 7.0014886648764705 days ago (will be updated when >5 days) ## Update config/hp_inheritance-omim_phenotype/config.yaml => output/tsv/hp_inheritance-omim_phenotype.tsv -< 2023-12-08T18:22:25 hp_inheritance-omim_phenotype +< 2023-12-15T18:24:34 hp_inheritance-omim_phenotype togoid-config config/hp_inheritance-omim_phenotype update # Success: output/tsv/hp_inheritance-omim_phenotype.tsv is updated -> 2023-12-08T18:22:26 hp_inheritance-omim_phenotype +> 2023-12-15T18:24:35 hp_inheritance-omim_phenotype ### Update TSV for hp_phenotype-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/hp_phenotype-omim_phenotype.tsv is newer than config/hp_phenotype-omim_phenotype/config.yaml # File output/tsv/hp_phenotype-omim_phenotype.tsv is newer than input/hp_phenotype/download.lock @@ -833,39 +821,39 @@ togoid-config config/hp_inheritance-omim_phenotype update ### Update TSV for insdc-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc-bioproject.tsv is newer than config/insdc-bioproject/config.yaml # File output/tsv/insdc-bioproject.tsv has no timestamp file -# File output/tsv/insdc-bioproject.tsv is created 6.677924754810104 days ago (will be updated when >5 days) +# File output/tsv/insdc-bioproject.tsv is created 7.001232013244584 days ago (will be updated when >5 days) ## Update config/insdc-bioproject/config.yaml => output/tsv/insdc-bioproject.tsv -< 2023-12-08T18:22:26 insdc-bioproject +< 2023-12-15T18:24:35 insdc-bioproject togoid-config config/insdc-bioproject update # Success: output/tsv/insdc-bioproject.tsv is updated -> 2023-12-08T18:22:49 insdc-bioproject +> 2023-12-15T18:24:59 insdc-bioproject ### Update TSV for insdc-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc-biosample.tsv is newer than config/insdc-biosample/config.yaml # File output/tsv/insdc-biosample.tsv has no timestamp file -# File output/tsv/insdc-biosample.tsv is created 6.677313457803276 days ago (will be updated when >5 days) +# File output/tsv/insdc-biosample.tsv is created 7.000630936858727 days ago (will be updated when >5 days) ## Update config/insdc-biosample/config.yaml => output/tsv/insdc-biosample.tsv -< 2023-12-08T18:22:49 insdc-biosample +< 2023-12-15T18:24:59 insdc-biosample togoid-config config/insdc-biosample update # Success: output/tsv/insdc-biosample.tsv is updated -> 2023-12-08T18:24:04 insdc-biosample +> 2023-12-15T18:26:18 insdc-biosample ### Update TSV for insdc_master-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc_master-bioproject.tsv is newer than config/insdc_master-bioproject/config.yaml # File output/tsv/insdc_master-bioproject.tsv has no timestamp file -# File output/tsv/insdc_master-bioproject.tsv is created 6.6781680403521415 days ago (will be updated when >5 days) +# File output/tsv/insdc_master-bioproject.tsv is created 7.0015299306952885 days ago (will be updated when >5 days) ## Update config/insdc_master-bioproject/config.yaml => output/tsv/insdc_master-bioproject.tsv -< 2023-12-08T18:24:04 insdc_master-bioproject +< 2023-12-15T18:26:18 insdc_master-bioproject togoid-config config/insdc_master-bioproject update # Success: output/tsv/insdc_master-bioproject.tsv is updated -> 2023-12-08T18:24:06 insdc_master-bioproject +> 2023-12-15T18:26:19 insdc_master-bioproject ### Update TSV for insdc_master-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc_master-biosample.tsv is newer than config/insdc_master-biosample/config.yaml # File output/tsv/insdc_master-biosample.tsv has no timestamp file -# File output/tsv/insdc_master-biosample.tsv is created 6.678166945661123 days ago (will be updated when >5 days) +# File output/tsv/insdc_master-biosample.tsv is created 7.001529338749376 days ago (will be updated when >5 days) ## Update config/insdc_master-biosample/config.yaml => output/tsv/insdc_master-biosample.tsv -< 2023-12-08T18:24:06 insdc_master-biosample +< 2023-12-15T18:26:19 insdc_master-biosample togoid-config config/insdc_master-biosample update # Success: output/tsv/insdc_master-biosample.tsv is updated -> 2023-12-08T18:24:07 insdc_master-biosample +> 2023-12-15T18:26:21 insdc_master-biosample ### Update TSV for interpro-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/interpro-go.tsv is newer than config/interpro-go/config.yaml # File output/tsv/interpro-go.tsv is newer than input/interpro/download.lock @@ -901,425 +889,425 @@ togoid-config config/insdc_master-biosample update ### Update TSV for jga_study-jga_dataset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/jga_study-jga_dataset.tsv is newer than config/jga_study-jga_dataset/config.yaml # File output/tsv/jga_study-jga_dataset.tsv has no timestamp file -# File output/tsv/jga_study-jga_dataset.tsv is created 6.678179375586423 days ago (will be updated when >5 days) +# File output/tsv/jga_study-jga_dataset.tsv is created 7.001544186766562 days ago (will be updated when >5 days) ## Update config/jga_study-jga_dataset/config.yaml => output/tsv/jga_study-jga_dataset.tsv -< 2023-12-08T18:24:07 jga_study-jga_dataset +< 2023-12-15T18:26:21 jga_study-jga_dataset togoid-config config/jga_study-jga_dataset update # Success: output/tsv/jga_study-jga_dataset.tsv is updated -> 2023-12-08T18:24:08 jga_study-jga_dataset +> 2023-12-15T18:26:21 jga_study-jga_dataset ### Update TSV for jga_study-nbdc_human_db if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/jga_study-nbdc_human_db.tsv is newer than config/jga_study-nbdc_human_db/config.yaml # File output/tsv/jga_study-nbdc_human_db.tsv has no timestamp file -# File output/tsv/jga_study-nbdc_human_db.tsv is created 6.678178340541772 days ago (will be updated when >5 days) +# File output/tsv/jga_study-nbdc_human_db.tsv is created 7.001544575363634 days ago (will be updated when >5 days) ## Update config/jga_study-nbdc_human_db/config.yaml => output/tsv/jga_study-nbdc_human_db.tsv -< 2023-12-08T18:24:08 jga_study-nbdc_human_db +< 2023-12-15T18:26:21 jga_study-nbdc_human_db togoid-config config/jga_study-nbdc_human_db update # Success: output/tsv/jga_study-nbdc_human_db.tsv is updated -> 2023-12-08T18:24:08 jga_study-nbdc_human_db +> 2023-12-15T18:26:22 jga_study-nbdc_human_db ### Update TSV for jga_study-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/jga_study-pubmed.tsv is newer than config/jga_study-pubmed/config.yaml # File output/tsv/jga_study-pubmed.tsv has no timestamp file -# File output/tsv/jga_study-pubmed.tsv is created 6.678178148080255 days ago (will be updated when >5 days) +# File output/tsv/jga_study-pubmed.tsv is created 7.001543772029607 days ago (will be updated when >5 days) ## Update config/jga_study-pubmed/config.yaml => output/tsv/jga_study-pubmed.tsv -< 2023-12-08T18:24:08 jga_study-pubmed +< 2023-12-15T18:26:22 jga_study-pubmed togoid-config config/jga_study-pubmed update # Success: output/tsv/jga_study-pubmed.tsv is updated -> 2023-12-08T18:24:08 jga_study-pubmed +> 2023-12-15T18:26:22 jga_study-pubmed ### Update TSV for lipidmaps-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/lipidmaps-chebi.tsv is newer than config/lipidmaps-chebi/config.yaml # File output/tsv/lipidmaps-chebi.tsv has no timestamp file -# File output/tsv/lipidmaps-chebi.tsv is created 11.295741577278218 days ago (will be updated when >5 days) +# File output/tsv/lipidmaps-chebi.tsv is created 7.00148217822993 days ago (will be updated when >5 days) ## Update config/lipidmaps-chebi/config.yaml => output/tsv/lipidmaps-chebi.tsv -< 2023-12-08T18:24:08 lipidmaps-chebi +< 2023-12-15T18:26:22 lipidmaps-chebi togoid-config config/lipidmaps-chebi update # Success: output/tsv/lipidmaps-chebi.tsv is updated -> 2023-12-08T18:24:14 lipidmaps-chebi +> 2023-12-15T18:26:26 lipidmaps-chebi ### Update TSV for lipidmaps-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/lipidmaps-inchi_key.tsv is newer than config/lipidmaps-inchi_key/config.yaml # File output/tsv/lipidmaps-inchi_key.tsv has no timestamp file -# File output/tsv/lipidmaps-inchi_key.tsv is created 11.295769969515904 days ago (will be updated when >5 days) +# File output/tsv/lipidmaps-inchi_key.tsv is created 7.001496737057106 days ago (will be updated when >5 days) ## Update config/lipidmaps-inchi_key/config.yaml => output/tsv/lipidmaps-inchi_key.tsv -< 2023-12-08T18:24:14 lipidmaps-inchi_key +< 2023-12-15T18:26:26 lipidmaps-inchi_key togoid-config config/lipidmaps-inchi_key update # Success: output/tsv/lipidmaps-inchi_key.tsv is updated -> 2023-12-08T18:24:17 lipidmaps-inchi_key +> 2023-12-15T18:26:29 lipidmaps-inchi_key ### Update TSV for lipidmaps-swisslipids if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/lipidmaps-swisslipids.tsv is newer than config/lipidmaps-swisslipids/config.yaml # File output/tsv/lipidmaps-swisslipids.tsv has no timestamp file -# File output/tsv/lipidmaps-swisslipids.tsv is created 11.295776296747963 days ago (will be updated when >5 days) +# File output/tsv/lipidmaps-swisslipids.tsv is created 7.001505034392349 days ago (will be updated when >5 days) ## Update config/lipidmaps-swisslipids/config.yaml => output/tsv/lipidmaps-swisslipids.tsv -< 2023-12-08T18:24:17 lipidmaps-swisslipids +< 2023-12-15T18:26:29 lipidmaps-swisslipids togoid-config config/lipidmaps-swisslipids update # Success: output/tsv/lipidmaps-swisslipids.tsv is updated -> 2023-12-08T18:24:19 lipidmaps-swisslipids +> 2023-12-15T18:26:32 lipidmaps-swisslipids ### Update TSV for mbgd_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mbgd_gene-uniprot.tsv is newer than config/mbgd_gene-uniprot/config.yaml # File output/tsv/mbgd_gene-uniprot.tsv has no timestamp file -# File output/tsv/mbgd_gene-uniprot.tsv is created 11.2683393588625 days ago (will be updated when >5 days) +# File output/tsv/mbgd_gene-uniprot.tsv is created 6.973856908661018 days ago (will be updated when >5 days) ## Update config/mbgd_gene-uniprot/config.yaml => output/tsv/mbgd_gene-uniprot.tsv -< 2023-12-08T18:24:19 mbgd_gene-uniprot +< 2023-12-15T18:26:32 mbgd_gene-uniprot togoid-config config/mbgd_gene-uniprot update # Success: output/tsv/mbgd_gene-uniprot.tsv is updated -> 2023-12-08T19:04:11 mbgd_gene-uniprot +> 2023-12-15T19:06:25 mbgd_gene-uniprot ### Update TSV for mbgd_organism-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mbgd_organism-taxonomy.tsv is newer than config/mbgd_organism-taxonomy/config.yaml # File output/tsv/mbgd_organism-taxonomy.tsv has no timestamp file -# File output/tsv/mbgd_organism-taxonomy.tsv is created 11.296010918622395 days ago (will be updated when >5 days) +# File output/tsv/mbgd_organism-taxonomy.tsv is created 7.00155619482544 days ago (will be updated when >5 days) ## Update config/mbgd_organism-taxonomy/config.yaml => output/tsv/mbgd_organism-taxonomy.tsv -< 2023-12-08T19:04:11 mbgd_organism-taxonomy +< 2023-12-15T19:06:25 mbgd_organism-taxonomy togoid-config config/mbgd_organism-taxonomy update # Success: output/tsv/mbgd_organism-taxonomy.tsv is updated -> 2023-12-08T19:04:11 mbgd_organism-taxonomy +> 2023-12-15T19:06:26 mbgd_organism-taxonomy ### Update TSV for medgen-hp_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-hp_phenotype.tsv is newer than config/medgen-hp_phenotype/config.yaml # File output/tsv/medgen-hp_phenotype.tsv has no timestamp file -# File output/tsv/medgen-hp_phenotype.tsv is created 6.705907856983564 days ago (will be updated when >5 days) +# File output/tsv/medgen-hp_phenotype.tsv is created 7.001554756301018 days ago (will be updated when >5 days) ## Update config/medgen-hp_phenotype/config.yaml => output/tsv/medgen-hp_phenotype.tsv -< 2023-12-08T19:04:11 medgen-hp_phenotype +< 2023-12-15T19:06:26 medgen-hp_phenotype togoid-config config/medgen-hp_phenotype update # Success: output/tsv/medgen-hp_phenotype.tsv is updated -> 2023-12-08T19:04:11 medgen-hp_phenotype +> 2023-12-15T19:06:26 medgen-hp_phenotype ### Update TSV for medgen-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-mesh.tsv is newer than config/medgen-mesh/config.yaml # File output/tsv/medgen-mesh.tsv has no timestamp file -# File output/tsv/medgen-mesh.tsv is created 6.70590035375029 days ago (will be updated when >5 days) +# File output/tsv/medgen-mesh.tsv is created 7.001553826602107 days ago (will be updated when >5 days) ## Update config/medgen-mesh/config.yaml => output/tsv/medgen-mesh.tsv -< 2023-12-08T19:04:11 medgen-mesh +< 2023-12-15T19:06:26 medgen-mesh togoid-config config/medgen-mesh update # Success: output/tsv/medgen-mesh.tsv is updated -> 2023-12-08T19:04:12 medgen-mesh +> 2023-12-15T19:06:27 medgen-mesh ### Update TSV for medgen-mondo if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-mondo.tsv is newer than config/medgen-mondo/config.yaml # File output/tsv/medgen-mondo.tsv has no timestamp file -# File output/tsv/medgen-mondo.tsv is created 6.705890139594341 days ago (will be updated when >5 days) +# File output/tsv/medgen-mondo.tsv is created 7.0015534777499875 days ago (will be updated when >5 days) ## Update config/medgen-mondo/config.yaml => output/tsv/medgen-mondo.tsv -< 2023-12-08T19:04:12 medgen-mondo +< 2023-12-15T19:06:27 medgen-mondo togoid-config config/medgen-mondo update # Success: output/tsv/medgen-mondo.tsv is updated -> 2023-12-08T19:04:12 medgen-mondo +> 2023-12-15T19:06:27 medgen-mondo ### Update TSV for medgen-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-ncbigene.tsv is newer than config/medgen-ncbigene/config.yaml # File output/tsv/medgen-ncbigene.tsv has no timestamp file -# File output/tsv/medgen-ncbigene.tsv is created 6.705888587383784 days ago (will be updated when >5 days) +# File output/tsv/medgen-ncbigene.tsv is created 7.001553371880464 days ago (will be updated when >5 days) ## Update config/medgen-ncbigene/config.yaml => output/tsv/medgen-ncbigene.tsv -< 2023-12-08T19:04:12 medgen-ncbigene +< 2023-12-15T19:06:27 medgen-ncbigene togoid-config config/medgen-ncbigene update # Success: output/tsv/medgen-ncbigene.tsv is updated -> 2023-12-08T19:04:13 medgen-ncbigene +> 2023-12-15T19:06:27 medgen-ncbigene ### Update TSV for medgen-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-omim_phenotype.tsv is newer than config/medgen-omim_phenotype/config.yaml # File output/tsv/medgen-omim_phenotype.tsv has no timestamp file -# File output/tsv/medgen-omim_phenotype.tsv is created 6.7058822191659715 days ago (will be updated when >5 days) +# File output/tsv/medgen-omim_phenotype.tsv is created 7.001552305186145 days ago (will be updated when >5 days) ## Update config/medgen-omim_phenotype/config.yaml => output/tsv/medgen-omim_phenotype.tsv -< 2023-12-08T19:04:13 medgen-omim_phenotype +< 2023-12-15T19:06:27 medgen-omim_phenotype togoid-config config/medgen-omim_phenotype update # Success: output/tsv/medgen-omim_phenotype.tsv is updated -> 2023-12-08T19:04:13 medgen-omim_phenotype +> 2023-12-15T19:06:28 medgen-omim_phenotype ### Update TSV for medgen-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-orphanet_phenotype.tsv is newer than config/medgen-orphanet_phenotype/config.yaml # File output/tsv/medgen-orphanet_phenotype.tsv has no timestamp file -# File output/tsv/medgen-orphanet_phenotype.tsv is created 6.705879513938646 days ago (will be updated when >5 days) +# File output/tsv/medgen-orphanet_phenotype.tsv is created 7.001550980322512 days ago (will be updated when >5 days) ## Update config/medgen-orphanet_phenotype/config.yaml => output/tsv/medgen-orphanet_phenotype.tsv -< 2023-12-08T19:04:13 medgen-orphanet_phenotype +< 2023-12-15T19:06:28 medgen-orphanet_phenotype togoid-config config/medgen-orphanet_phenotype update # Success: output/tsv/medgen-orphanet_phenotype.tsv is updated -> 2023-12-08T19:04:14 medgen-orphanet_phenotype +> 2023-12-15T19:06:28 medgen-orphanet_phenotype ### Update TSV for mgi_gene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-ensembl_gene.tsv is newer than config/mgi_gene-ensembl_gene/config.yaml # File output/tsv/mgi_gene-ensembl_gene.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-ensembl_gene/config.yaml => output/tsv/mgi_gene-ensembl_gene.tsv -< 2023-12-08T19:04:14 mgi_gene-ensembl_gene +< 2023-12-15T19:06:28 mgi_gene-ensembl_gene togoid-config config/mgi_gene-ensembl_gene update # Success: output/tsv/mgi_gene-ensembl_gene.tsv is updated -> 2023-12-08T19:04:14 mgi_gene-ensembl_gene +> 2023-12-15T19:06:29 mgi_gene-ensembl_gene ### Update TSV for mgi_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-hgnc.tsv is newer than config/mgi_gene-hgnc/config.yaml # File output/tsv/mgi_gene-hgnc.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-hgnc/config.yaml => output/tsv/mgi_gene-hgnc.tsv -< 2023-12-08T19:04:14 mgi_gene-hgnc +< 2023-12-15T19:06:29 mgi_gene-hgnc togoid-config config/mgi_gene-hgnc update # Success: output/tsv/mgi_gene-hgnc.tsv is updated -> 2023-12-08T19:04:15 mgi_gene-hgnc +> 2023-12-15T19:06:29 mgi_gene-hgnc ### Update TSV for mgi_gene-mgi_allele if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-mgi_allele.tsv is newer than config/mgi_gene-mgi_allele/config.yaml # File output/tsv/mgi_gene-mgi_allele.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-mgi_allele/config.yaml => output/tsv/mgi_gene-mgi_allele.tsv -< 2023-12-08T19:04:15 mgi_gene-mgi_allele +< 2023-12-15T19:06:29 mgi_gene-mgi_allele togoid-config config/mgi_gene-mgi_allele update # Success: output/tsv/mgi_gene-mgi_allele.tsv is updated -> 2023-12-08T19:04:16 mgi_gene-mgi_allele +> 2023-12-15T19:06:31 mgi_gene-mgi_allele ### Update TSV for mgi_gene-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-ncbigene.tsv is newer than config/mgi_gene-ncbigene/config.yaml # File output/tsv/mgi_gene-ncbigene.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-ncbigene/config.yaml => output/tsv/mgi_gene-ncbigene.tsv -< 2023-12-08T19:04:16 mgi_gene-ncbigene +< 2023-12-15T19:06:31 mgi_gene-ncbigene togoid-config config/mgi_gene-ncbigene update # Success: output/tsv/mgi_gene-ncbigene.tsv is updated -> 2023-12-08T19:04:17 mgi_gene-ncbigene +> 2023-12-15T19:06:31 mgi_gene-ncbigene ### Update TSV for mgi_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-uniprot.tsv is newer than config/mgi_gene-uniprot/config.yaml # File output/tsv/mgi_gene-uniprot.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-uniprot/config.yaml => output/tsv/mgi_gene-uniprot.tsv -< 2023-12-08T19:04:17 mgi_gene-uniprot +< 2023-12-15T19:06:31 mgi_gene-uniprot togoid-config config/mgi_gene-uniprot update # Success: output/tsv/mgi_gene-uniprot.tsv is updated -> 2023-12-08T19:04:17 mgi_gene-uniprot +> 2023-12-15T19:06:31 mgi_gene-uniprot ### Update TSV for mgi_genotype-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_genotype-doid.tsv is newer than config/mgi_genotype-doid/config.yaml # File output/tsv/mgi_genotype-doid.tsv is older than input/mgi_genotype/download.lock ## Update config/mgi_genotype-doid/config.yaml => output/tsv/mgi_genotype-doid.tsv -< 2023-12-08T19:04:17 mgi_genotype-doid +< 2023-12-15T19:06:31 mgi_genotype-doid togoid-config config/mgi_genotype-doid update # Success: output/tsv/mgi_genotype-doid.tsv is updated -> 2023-12-08T19:04:20 mgi_genotype-doid +> 2023-12-15T19:06:35 mgi_genotype-doid ### Update TSV for mgi_genotype-mgi_allele if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_genotype-mgi_allele.tsv is newer than config/mgi_genotype-mgi_allele/config.yaml # File output/tsv/mgi_genotype-mgi_allele.tsv is older than input/mgi_genotype/download.lock ## Update config/mgi_genotype-mgi_allele/config.yaml => output/tsv/mgi_genotype-mgi_allele.tsv -< 2023-12-08T19:04:20 mgi_genotype-mgi_allele +< 2023-12-15T19:06:35 mgi_genotype-mgi_allele togoid-config config/mgi_genotype-mgi_allele update # Success: output/tsv/mgi_genotype-mgi_allele.tsv is updated -> 2023-12-08T19:04:22 mgi_genotype-mgi_allele +> 2023-12-15T19:06:36 mgi_genotype-mgi_allele ### Update TSV for mgi_genotype-mp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_genotype-mp.tsv is newer than config/mgi_genotype-mp/config.yaml # File output/tsv/mgi_genotype-mp.tsv is older than input/mgi_genotype/download.lock ## Update config/mgi_genotype-mp/config.yaml => output/tsv/mgi_genotype-mp.tsv -< 2023-12-08T19:04:22 mgi_genotype-mp +< 2023-12-15T19:06:36 mgi_genotype-mp togoid-config config/mgi_genotype-mp update # Success: output/tsv/mgi_genotype-mp.tsv is updated -> 2023-12-08T19:04:24 mgi_genotype-mp +> 2023-12-15T19:06:38 mgi_genotype-mp ### Update TSV for mondo-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-doid.tsv is newer than config/mondo-doid/config.yaml # File output/tsv/mondo-doid.tsv has no timestamp file -# File output/tsv/mondo-doid.tsv is created 6.70587632061595 days ago (will be updated when >5 days) +# File output/tsv/mondo-doid.tsv is created 7.001551762906215 days ago (will be updated when >5 days) ## Update config/mondo-doid/config.yaml => output/tsv/mondo-doid.tsv -< 2023-12-08T19:04:24 mondo-doid +< 2023-12-15T19:06:38 mondo-doid togoid-config config/mondo-doid update # Success: output/tsv/mondo-doid.tsv is updated -> 2023-12-08T19:04:24 mondo-doid +> 2023-12-15T19:06:39 mondo-doid ### Update TSV for mondo-hp_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-hp_phenotype.tsv is newer than config/mondo-hp_phenotype/config.yaml # File output/tsv/mondo-hp_phenotype.tsv has no timestamp file -# File output/tsv/mondo-hp_phenotype.tsv is created 6.705874662944641 days ago (will be updated when >5 days) +# File output/tsv/mondo-hp_phenotype.tsv is created 7.001552009316794 days ago (will be updated when >5 days) ## Update config/mondo-hp_phenotype/config.yaml => output/tsv/mondo-hp_phenotype.tsv -< 2023-12-08T19:04:24 mondo-hp_phenotype +< 2023-12-15T19:06:39 mondo-hp_phenotype togoid-config config/mondo-hp_phenotype update # Success: output/tsv/mondo-hp_phenotype.tsv is updated -> 2023-12-08T19:04:25 mondo-hp_phenotype +> 2023-12-15T19:06:39 mondo-hp_phenotype ### Update TSV for mondo-meddra if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-meddra.tsv is newer than config/mondo-meddra/config.yaml # File output/tsv/mondo-meddra.tsv has no timestamp file -# File output/tsv/mondo-meddra.tsv is created 6.7058723534572575 days ago (will be updated when >5 days) +# File output/tsv/mondo-meddra.tsv is created 7.001551466598091 days ago (will be updated when >5 days) ## Update config/mondo-meddra/config.yaml => output/tsv/mondo-meddra.tsv -< 2023-12-08T19:04:25 mondo-meddra +< 2023-12-15T19:06:39 mondo-meddra togoid-config config/mondo-meddra update # Success: output/tsv/mondo-meddra.tsv is updated -> 2023-12-08T19:04:25 mondo-meddra +> 2023-12-15T19:06:39 mondo-meddra ### Update TSV for mondo-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-mesh.tsv is newer than config/mondo-mesh/config.yaml # File output/tsv/mondo-mesh.tsv has no timestamp file -# File output/tsv/mondo-mesh.tsv is created 6.705869590603357 days ago (will be updated when >5 days) +# File output/tsv/mondo-mesh.tsv is created 7.001551187360046 days ago (will be updated when >5 days) ## Update config/mondo-mesh/config.yaml => output/tsv/mondo-mesh.tsv -< 2023-12-08T19:04:25 mondo-mesh +< 2023-12-15T19:06:39 mondo-mesh togoid-config config/mondo-mesh update # Success: output/tsv/mondo-mesh.tsv is updated -> 2023-12-08T19:04:25 mondo-mesh +> 2023-12-15T19:06:40 mondo-mesh ### Update TSV for mondo-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-omim_phenotype.tsv is newer than config/mondo-omim_phenotype/config.yaml # File output/tsv/mondo-omim_phenotype.tsv has no timestamp file -# File output/tsv/mondo-omim_phenotype.tsv is created 6.705866992057789 days ago (will be updated when >5 days) +# File output/tsv/mondo-omim_phenotype.tsv is created 7.001550924447245 days ago (will be updated when >5 days) ## Update config/mondo-omim_phenotype/config.yaml => output/tsv/mondo-omim_phenotype.tsv -< 2023-12-08T19:04:25 mondo-omim_phenotype +< 2023-12-15T19:06:40 mondo-omim_phenotype togoid-config config/mondo-omim_phenotype update # Success: output/tsv/mondo-omim_phenotype.tsv is updated -> 2023-12-08T19:04:26 mondo-omim_phenotype +> 2023-12-15T19:06:40 mondo-omim_phenotype ### Update TSV for mondo-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-orphanet_phenotype.tsv is newer than config/mondo-orphanet_phenotype/config.yaml # File output/tsv/mondo-orphanet_phenotype.tsv has no timestamp file -# File output/tsv/mondo-orphanet_phenotype.tsv is created 6.705864460072789 days ago (will be updated when >5 days) +# File output/tsv/mondo-orphanet_phenotype.tsv is created 7.001550672898009 days ago (will be updated when >5 days) ## Update config/mondo-orphanet_phenotype/config.yaml => output/tsv/mondo-orphanet_phenotype.tsv -< 2023-12-08T19:04:26 mondo-orphanet_phenotype +< 2023-12-15T19:06:40 mondo-orphanet_phenotype togoid-config config/mondo-orphanet_phenotype update # Success: output/tsv/mondo-orphanet_phenotype.tsv is updated -> 2023-12-08T19:04:26 mondo-orphanet_phenotype +> 2023-12-15T19:06:41 mondo-orphanet_phenotype ### Update TSV for nando-mondo if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/nando-mondo.tsv is newer than config/nando-mondo/config.yaml # File output/tsv/nando-mondo.tsv has no timestamp file -# File output/tsv/nando-mondo.tsv is created 6.705860951717685 days ago (will be updated when >5 days) +# File output/tsv/nando-mondo.tsv is created 7.001550638943043 days ago (will be updated when >5 days) ## Update config/nando-mondo/config.yaml => output/tsv/nando-mondo.tsv -< 2023-12-08T19:04:26 nando-mondo +< 2023-12-15T19:06:41 nando-mondo togoid-config config/nando-mondo update # Success: output/tsv/nando-mondo.tsv is updated -> 2023-12-08T19:04:27 nando-mondo +> 2023-12-15T19:06:41 nando-mondo ### Update TSV for ncbigene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-ensembl_gene.tsv is newer than config/ncbigene-ensembl_gene/config.yaml # File output/tsv/ncbigene-ensembl_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-ensembl_gene/config.yaml => output/tsv/ncbigene-ensembl_gene.tsv -< 2023-12-08T19:04:27 ncbigene-ensembl_gene +< 2023-12-15T19:06:41 ncbigene-ensembl_gene togoid-config config/ncbigene-ensembl_gene update # Success: output/tsv/ncbigene-ensembl_gene.tsv is updated -> 2023-12-08T19:04:56 ncbigene-ensembl_gene +> 2023-12-15T19:07:09 ncbigene-ensembl_gene ### Update TSV for ncbigene-ensembl_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-ensembl_protein.tsv is newer than config/ncbigene-ensembl_protein/config.yaml # File output/tsv/ncbigene-ensembl_protein.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-ensembl_protein/config.yaml => output/tsv/ncbigene-ensembl_protein.tsv -< 2023-12-08T19:04:56 ncbigene-ensembl_protein +< 2023-12-15T19:07:09 ncbigene-ensembl_protein togoid-config config/ncbigene-ensembl_protein update # Success: output/tsv/ncbigene-ensembl_protein.tsv is updated -> 2023-12-08T19:05:54 ncbigene-ensembl_protein +> 2023-12-15T19:08:03 ncbigene-ensembl_protein ### Update TSV for ncbigene-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-ensembl_transcript.tsv is newer than config/ncbigene-ensembl_transcript/config.yaml # File output/tsv/ncbigene-ensembl_transcript.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-ensembl_transcript/config.yaml => output/tsv/ncbigene-ensembl_transcript.tsv -< 2023-12-08T19:05:54 ncbigene-ensembl_transcript +< 2023-12-15T19:08:03 ncbigene-ensembl_transcript togoid-config config/ncbigene-ensembl_transcript update # Success: output/tsv/ncbigene-ensembl_transcript.tsv is updated -> 2023-12-08T19:06:43 ncbigene-ensembl_transcript +> 2023-12-15T19:08:59 ncbigene-ensembl_transcript ### Update TSV for ncbigene-flybase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-flybase_gene.tsv is newer than config/ncbigene-flybase_gene/config.yaml # File output/tsv/ncbigene-flybase_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-flybase_gene/config.yaml => output/tsv/ncbigene-flybase_gene.tsv -< 2023-12-08T19:06:43 ncbigene-flybase_gene +< 2023-12-15T19:08:59 ncbigene-flybase_gene togoid-config config/ncbigene-flybase_gene update # Success: output/tsv/ncbigene-flybase_gene.tsv is updated -> 2023-12-08T19:07:56 ncbigene-flybase_gene +> 2023-12-15T19:10:15 ncbigene-flybase_gene ### Update TSV for ncbigene-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-go.tsv is newer than config/ncbigene-go/config.yaml # File output/tsv/ncbigene-go.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-go/config.yaml => output/tsv/ncbigene-go.tsv -< 2023-12-08T19:07:56 ncbigene-go +< 2023-12-15T19:10:15 ncbigene-go togoid-config config/ncbigene-go update # Success: output/tsv/ncbigene-go.tsv is updated -> 2023-12-08T19:10:51 ncbigene-go +> 2023-12-15T19:13:29 ncbigene-go ### Update TSV for ncbigene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-hgnc.tsv is newer than config/ncbigene-hgnc/config.yaml # File output/tsv/ncbigene-hgnc.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-hgnc/config.yaml => output/tsv/ncbigene-hgnc.tsv -< 2023-12-08T19:10:51 ncbigene-hgnc +< 2023-12-15T19:13:29 ncbigene-hgnc togoid-config config/ncbigene-hgnc update # Success: output/tsv/ncbigene-hgnc.tsv is updated -> 2023-12-08T19:10:52 ncbigene-hgnc +> 2023-12-15T19:13:29 ncbigene-hgnc ### Update TSV for ncbigene-mgi_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-mgi_gene.tsv is newer than config/ncbigene-mgi_gene/config.yaml # File output/tsv/ncbigene-mgi_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-mgi_gene/config.yaml => output/tsv/ncbigene-mgi_gene.tsv -< 2023-12-08T19:10:52 ncbigene-mgi_gene +< 2023-12-15T19:13:29 ncbigene-mgi_gene togoid-config config/ncbigene-mgi_gene update # Success: output/tsv/ncbigene-mgi_gene.tsv is updated -> 2023-12-08T19:11:47 ncbigene-mgi_gene +> 2023-12-15T19:14:25 ncbigene-mgi_gene ### Update TSV for ncbigene-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-mirbase.tsv is newer than config/ncbigene-mirbase/config.yaml # File output/tsv/ncbigene-mirbase.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-mirbase/config.yaml => output/tsv/ncbigene-mirbase.tsv -< 2023-12-08T19:11:47 ncbigene-mirbase +< 2023-12-15T19:14:25 ncbigene-mirbase togoid-config config/ncbigene-mirbase update # Success: output/tsv/ncbigene-mirbase.tsv is updated -> 2023-12-08T19:13:21 ncbigene-mirbase +> 2023-12-15T19:15:58 ncbigene-mirbase ### Update TSV for ncbigene-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-omim_gene.tsv is newer than config/ncbigene-omim_gene/config.yaml # File output/tsv/ncbigene-omim_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-omim_gene/config.yaml => output/tsv/ncbigene-omim_gene.tsv -< 2023-12-08T19:13:21 ncbigene-omim_gene +< 2023-12-15T19:15:58 ncbigene-omim_gene togoid-config config/ncbigene-omim_gene update # Success: output/tsv/ncbigene-omim_gene.tsv is updated -> 2023-12-08T19:13:22 ncbigene-omim_gene +> 2023-12-15T19:15:59 ncbigene-omim_gene ### Update TSV for ncbigene-refseq_genomic if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-refseq_genomic.tsv is newer than config/ncbigene-refseq_genomic/config.yaml # File output/tsv/ncbigene-refseq_genomic.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-refseq_genomic/config.yaml => output/tsv/ncbigene-refseq_genomic.tsv -< 2023-12-08T19:13:22 ncbigene-refseq_genomic +< 2023-12-15T19:15:59 ncbigene-refseq_genomic togoid-config config/ncbigene-refseq_genomic update # Success: output/tsv/ncbigene-refseq_genomic.tsv is updated -> 2023-12-08T19:17:09 ncbigene-refseq_genomic +> 2023-12-15T19:19:49 ncbigene-refseq_genomic ### Update TSV for ncbigene-refseq_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-refseq_protein.tsv is newer than config/ncbigene-refseq_protein/config.yaml # File output/tsv/ncbigene-refseq_protein.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-refseq_protein/config.yaml => output/tsv/ncbigene-refseq_protein.tsv -< 2023-12-08T19:17:09 ncbigene-refseq_protein +< 2023-12-15T19:19:49 ncbigene-refseq_protein togoid-config config/ncbigene-refseq_protein update # Success: output/tsv/ncbigene-refseq_protein.tsv is updated -> 2023-12-08T19:21:19 ncbigene-refseq_protein +> 2023-12-15T19:23:59 ncbigene-refseq_protein ### Update TSV for ncbigene-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-refseq_rna.tsv is newer than config/ncbigene-refseq_rna/config.yaml # File output/tsv/ncbigene-refseq_rna.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-refseq_rna/config.yaml => output/tsv/ncbigene-refseq_rna.tsv -< 2023-12-08T19:21:19 ncbigene-refseq_rna +< 2023-12-15T19:23:59 ncbigene-refseq_rna togoid-config config/ncbigene-refseq_rna update # Success: output/tsv/ncbigene-refseq_rna.tsv is updated -> 2023-12-08T19:25:00 ncbigene-refseq_rna +> 2023-12-15T19:27:37 ncbigene-refseq_rna ### Update TSV for ncbigene-rgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-rgd.tsv is newer than config/ncbigene-rgd/config.yaml # File output/tsv/ncbigene-rgd.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-rgd/config.yaml => output/tsv/ncbigene-rgd.tsv -< 2023-12-08T19:25:00 ncbigene-rgd +< 2023-12-15T19:27:37 ncbigene-rgd togoid-config config/ncbigene-rgd update # Success: output/tsv/ncbigene-rgd.tsv is updated -> 2023-12-08T19:25:56 ncbigene-rgd +> 2023-12-15T19:28:32 ncbigene-rgd ### Update TSV for ncbigene-sgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-sgd.tsv is newer than config/ncbigene-sgd/config.yaml # File output/tsv/ncbigene-sgd.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-sgd/config.yaml => output/tsv/ncbigene-sgd.tsv -< 2023-12-08T19:25:56 ncbigene-sgd +< 2023-12-15T19:28:32 ncbigene-sgd togoid-config config/ncbigene-sgd update # Success: output/tsv/ncbigene-sgd.tsv is updated -> 2023-12-08T19:27:00 ncbigene-sgd +> 2023-12-15T19:29:37 ncbigene-sgd ### Update TSV for ncbigene-tair if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-tair.tsv is newer than config/ncbigene-tair/config.yaml # File output/tsv/ncbigene-tair.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-tair/config.yaml => output/tsv/ncbigene-tair.tsv -< 2023-12-08T19:27:00 ncbigene-tair +< 2023-12-15T19:29:37 ncbigene-tair togoid-config config/ncbigene-tair update # Success: output/tsv/ncbigene-tair.tsv is updated -> 2023-12-08T19:28:04 ncbigene-tair +> 2023-12-15T19:30:43 ncbigene-tair ### Update TSV for ncbigene-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-taxonomy.tsv is newer than config/ncbigene-taxonomy/config.yaml # File output/tsv/ncbigene-taxonomy.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-taxonomy/config.yaml => output/tsv/ncbigene-taxonomy.tsv -< 2023-12-08T19:28:04 ncbigene-taxonomy +< 2023-12-15T19:30:43 ncbigene-taxonomy togoid-config config/ncbigene-taxonomy update # Success: output/tsv/ncbigene-taxonomy.tsv is updated -> 2023-12-08T19:28:46 ncbigene-taxonomy +> 2023-12-15T19:31:28 ncbigene-taxonomy ### Update TSV for ncbigene-vgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-vgnc.tsv is newer than config/ncbigene-vgnc/config.yaml # File output/tsv/ncbigene-vgnc.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-vgnc/config.yaml => output/tsv/ncbigene-vgnc.tsv -< 2023-12-08T19:28:46 ncbigene-vgnc +< 2023-12-15T19:31:28 ncbigene-vgnc togoid-config config/ncbigene-vgnc update # Success: output/tsv/ncbigene-vgnc.tsv is updated -> 2023-12-08T19:29:51 ncbigene-vgnc +> 2023-12-15T19:32:32 ncbigene-vgnc ### Update TSV for ncbigene-wormbase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-wormbase_gene.tsv is newer than config/ncbigene-wormbase_gene/config.yaml # File output/tsv/ncbigene-wormbase_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-wormbase_gene/config.yaml => output/tsv/ncbigene-wormbase_gene.tsv -< 2023-12-08T19:29:51 ncbigene-wormbase_gene +< 2023-12-15T19:32:32 ncbigene-wormbase_gene togoid-config config/ncbigene-wormbase_gene update # Success: output/tsv/ncbigene-wormbase_gene.tsv is updated -> 2023-12-08T19:30:55 ncbigene-wormbase_gene +> 2023-12-15T19:33:37 ncbigene-wormbase_gene ### Update TSV for ncbigene-xenbase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-xenbase_gene.tsv is newer than config/ncbigene-xenbase_gene/config.yaml # File output/tsv/ncbigene-xenbase_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-xenbase_gene/config.yaml => output/tsv/ncbigene-xenbase_gene.tsv -< 2023-12-08T19:30:55 ncbigene-xenbase_gene +< 2023-12-15T19:33:37 ncbigene-xenbase_gene togoid-config config/ncbigene-xenbase_gene update # Success: output/tsv/ncbigene-xenbase_gene.tsv is updated -> 2023-12-08T19:31:59 ncbigene-xenbase_gene +> 2023-12-15T19:34:41 ncbigene-xenbase_gene ### Update TSV for ncbigene-zfin_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-zfin_gene.tsv is newer than config/ncbigene-zfin_gene/config.yaml # File output/tsv/ncbigene-zfin_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-zfin_gene/config.yaml => output/tsv/ncbigene-zfin_gene.tsv -< 2023-12-08T19:31:59 ncbigene-zfin_gene +< 2023-12-15T19:34:41 ncbigene-zfin_gene togoid-config config/ncbigene-zfin_gene update # Success: output/tsv/ncbigene-zfin_gene.tsv is updated -> 2023-12-08T19:33:03 ncbigene-zfin_gene +> 2023-12-15T19:35:46 ncbigene-zfin_gene ### Update TSV for ncit_disease-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncit_disease-ncit_tissue.tsv is newer than config/ncit_disease-ncit_tissue/config.yaml # File output/tsv/ncit_disease-ncit_tissue.tsv has no timestamp file -# File output/tsv/ncit_disease-ncit_tissue.tsv is created 11.28817725726177 days ago (will be updated when >5 days) +# File output/tsv/ncit_disease-ncit_tissue.tsv is created 7.001854873073286 days ago (will be updated when >5 days) ## Update config/ncit_disease-ncit_tissue/config.yaml => output/tsv/ncit_disease-ncit_tissue.tsv -< 2023-12-08T19:33:03 ncit_disease-ncit_tissue +< 2023-12-15T19:35:46 ncit_disease-ncit_tissue togoid-config config/ncit_disease-ncit_tissue update # Success: output/tsv/ncit_disease-ncit_tissue.tsv is updated -> 2023-12-08T19:33:06 ncit_disease-ncit_tissue +> 2023-12-15T19:35:52 ncit_disease-ncit_tissue ### Update TSV for oma_protein-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/oma_protein-ensembl_gene.tsv is newer than config/oma_protein-ensembl_gene/config.yaml # File output/tsv/oma_protein-ensembl_gene.tsv is newer than input/oma_protein/download.lock @@ -1339,120 +1327,120 @@ togoid-config config/ncit_disease-ncit_tissue update ### Update TSV for orphanet_gene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-ensembl_gene.tsv is newer than config/orphanet_gene-ensembl_gene/config.yaml # File output/tsv/orphanet_gene-ensembl_gene.tsv has no timestamp file -# File output/tsv/orphanet_gene-ensembl_gene.tsv is created 6.705389125147407 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-ensembl_gene.tsv is created 7.001921250512291 days ago (will be updated when >5 days) ## Update config/orphanet_gene-ensembl_gene/config.yaml => output/tsv/orphanet_gene-ensembl_gene.tsv -< 2023-12-08T19:33:06 orphanet_gene-ensembl_gene +< 2023-12-15T19:35:52 orphanet_gene-ensembl_gene togoid-config config/orphanet_gene-ensembl_gene update # Success: output/tsv/orphanet_gene-ensembl_gene.tsv is updated -> 2023-12-08T19:33:06 orphanet_gene-ensembl_gene +> 2023-12-15T19:35:53 orphanet_gene-ensembl_gene ### Update TSV for orphanet_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-hgnc.tsv is newer than config/orphanet_gene-hgnc/config.yaml # File output/tsv/orphanet_gene-hgnc.tsv has no timestamp file -# File output/tsv/orphanet_gene-hgnc.tsv is created 6.705389173841794 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-hgnc.tsv is created 7.001923569398055 days ago (will be updated when >5 days) ## Update config/orphanet_gene-hgnc/config.yaml => output/tsv/orphanet_gene-hgnc.tsv -< 2023-12-08T19:33:06 orphanet_gene-hgnc +< 2023-12-15T19:35:53 orphanet_gene-hgnc togoid-config config/orphanet_gene-hgnc update # Success: output/tsv/orphanet_gene-hgnc.tsv is updated -> 2023-12-08T19:33:07 orphanet_gene-hgnc +> 2023-12-15T19:35:53 orphanet_gene-hgnc ### Update TSV for orphanet_gene-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-omim_gene.tsv is newer than config/orphanet_gene-omim_gene/config.yaml # File output/tsv/orphanet_gene-omim_gene.tsv has no timestamp file -# File output/tsv/orphanet_gene-omim_gene.tsv is created 6.705387355726818 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-omim_gene.tsv is created 7.001923255711423 days ago (will be updated when >5 days) ## Update config/orphanet_gene-omim_gene/config.yaml => output/tsv/orphanet_gene-omim_gene.tsv -< 2023-12-08T19:33:07 orphanet_gene-omim_gene +< 2023-12-15T19:35:53 orphanet_gene-omim_gene togoid-config config/orphanet_gene-omim_gene update # Success: output/tsv/orphanet_gene-omim_gene.tsv is updated -> 2023-12-08T19:33:07 orphanet_gene-omim_gene +> 2023-12-15T19:35:54 orphanet_gene-omim_gene ### Update TSV for orphanet_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-uniprot.tsv is newer than config/orphanet_gene-uniprot/config.yaml # File output/tsv/orphanet_gene-uniprot.tsv has no timestamp file -# File output/tsv/orphanet_gene-uniprot.tsv is created 6.705385843943113 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-uniprot.tsv is created 7.00192265289088 days ago (will be updated when >5 days) ## Update config/orphanet_gene-uniprot/config.yaml => output/tsv/orphanet_gene-uniprot.tsv -< 2023-12-08T19:33:07 orphanet_gene-uniprot +< 2023-12-15T19:35:54 orphanet_gene-uniprot togoid-config config/orphanet_gene-uniprot update # Success: output/tsv/orphanet_gene-uniprot.tsv is updated -> 2023-12-08T19:33:08 orphanet_gene-uniprot +> 2023-12-15T19:35:54 orphanet_gene-uniprot ### Update TSV for orphanet_phenotype-meddra if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-meddra.tsv is newer than config/orphanet_phenotype-meddra/config.yaml # File output/tsv/orphanet_phenotype-meddra.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-meddra.tsv is created 6.705383222066574 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-meddra.tsv is created 7.001923074115163 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-meddra/config.yaml => output/tsv/orphanet_phenotype-meddra.tsv -< 2023-12-08T19:33:08 orphanet_phenotype-meddra +< 2023-12-15T19:35:54 orphanet_phenotype-meddra togoid-config config/orphanet_phenotype-meddra update # Success: output/tsv/orphanet_phenotype-meddra.tsv is updated -> 2023-12-08T19:33:08 orphanet_phenotype-meddra +> 2023-12-15T19:35:55 orphanet_phenotype-meddra ### Update TSV for orphanet_phenotype-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-mesh.tsv is newer than config/orphanet_phenotype-mesh/config.yaml # File output/tsv/orphanet_phenotype-mesh.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-mesh.tsv is created 6.705380776104491 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-mesh.tsv is created 7.001923183787107 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-mesh/config.yaml => output/tsv/orphanet_phenotype-mesh.tsv -< 2023-12-08T19:33:08 orphanet_phenotype-mesh +< 2023-12-15T19:35:55 orphanet_phenotype-mesh togoid-config config/orphanet_phenotype-mesh update # Success: output/tsv/orphanet_phenotype-mesh.tsv is updated -> 2023-12-08T19:33:08 orphanet_phenotype-mesh +> 2023-12-15T19:35:55 orphanet_phenotype-mesh ### Update TSV for orphanet_phenotype-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-omim_phenotype.tsv is newer than config/orphanet_phenotype-omim_phenotype/config.yaml # File output/tsv/orphanet_phenotype-omim_phenotype.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-omim_phenotype.tsv is created 6.705376113770638 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-omim_phenotype.tsv is created 7.001923199446157 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-omim_phenotype/config.yaml => output/tsv/orphanet_phenotype-omim_phenotype.tsv -< 2023-12-08T19:33:08 orphanet_phenotype-omim_phenotype +< 2023-12-15T19:35:55 orphanet_phenotype-omim_phenotype togoid-config config/orphanet_phenotype-omim_phenotype update # Success: output/tsv/orphanet_phenotype-omim_phenotype.tsv is updated -> 2023-12-08T19:33:09 orphanet_phenotype-omim_phenotype +> 2023-12-15T19:35:55 orphanet_phenotype-omim_phenotype ### Update TSV for orphanet_phenotype-orphanet_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-orphanet_gene.tsv is newer than config/orphanet_phenotype-orphanet_gene/config.yaml # File output/tsv/orphanet_phenotype-orphanet_gene.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-orphanet_gene.tsv is created 6.705363453298623 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-orphanet_gene.tsv is created 7.001923727545128 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-orphanet_gene/config.yaml => output/tsv/orphanet_phenotype-orphanet_gene.tsv -< 2023-12-08T19:33:09 orphanet_phenotype-orphanet_gene +< 2023-12-15T19:35:55 orphanet_phenotype-orphanet_gene togoid-config config/orphanet_phenotype-orphanet_gene update # Success: output/tsv/orphanet_phenotype-orphanet_gene.tsv is updated -> 2023-12-08T19:33:09 orphanet_phenotype-orphanet_gene +> 2023-12-15T19:35:56 orphanet_phenotype-orphanet_gene ### Update TSV for pdb-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-go.tsv is newer than config/pdb-go/config.yaml # File output/tsv/pdb-go.tsv has no timestamp file -# File output/tsv/pdb-go.tsv is created 6.703349459325509 days ago (will be updated when >5 days) +# File output/tsv/pdb-go.tsv is created 7.001868051167176 days ago (will be updated when >5 days) ## Update config/pdb-go/config.yaml => output/tsv/pdb-go.tsv -< 2023-12-08T19:33:09 pdb-go +< 2023-12-15T19:35:56 pdb-go togoid-config config/pdb-go update # Success: output/tsv/pdb-go.tsv is updated -> 2023-12-08T19:33:14 pdb-go +> 2023-12-15T19:36:00 pdb-go ### Update TSV for pdb-interpro if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-interpro.tsv is newer than config/pdb-interpro/config.yaml # File output/tsv/pdb-interpro.tsv has no timestamp file -# File output/tsv/pdb-interpro.tsv is created 6.703054705754131 days ago (will be updated when >5 days) +# File output/tsv/pdb-interpro.tsv is created 7.001901543165545 days ago (will be updated when >5 days) ## Update config/pdb-interpro/config.yaml => output/tsv/pdb-interpro.tsv -< 2023-12-08T19:33:14 pdb-interpro +< 2023-12-15T19:36:00 pdb-interpro togoid-config config/pdb-interpro update # Success: output/tsv/pdb-interpro.tsv is updated -> 2023-12-08T19:33:16 pdb-interpro +> 2023-12-15T19:36:02 pdb-interpro ### Update TSV for pdb-pdb_ccd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-pdb_ccd.tsv is newer than config/pdb-pdb_ccd/config.yaml # File output/tsv/pdb-pdb_ccd.tsv has no timestamp file -# File output/tsv/pdb-pdb_ccd.tsv is created 6.702986664549768 days ago (will be updated when >5 days) +# File output/tsv/pdb-pdb_ccd.tsv is created 7.001905747787118 days ago (will be updated when >5 days) ## Update config/pdb-pdb_ccd/config.yaml => output/tsv/pdb-pdb_ccd.tsv -< 2023-12-08T19:33:16 pdb-pdb_ccd +< 2023-12-15T19:36:02 pdb-pdb_ccd togoid-config config/pdb-pdb_ccd update # Success: output/tsv/pdb-pdb_ccd.tsv is updated -> 2023-12-08T19:33:17 pdb-pdb_ccd +> 2023-12-15T19:36:03 pdb-pdb_ccd ### Update TSV for pdb-pfam if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-pfam.tsv is newer than config/pdb-pfam/config.yaml # File output/tsv/pdb-pfam.tsv has no timestamp file -# File output/tsv/pdb-pfam.tsv is created 6.702921265190764 days ago (will be updated when >5 days) +# File output/tsv/pdb-pfam.tsv is created 7.001908141667708 days ago (will be updated when >5 days) ## Update config/pdb-pfam/config.yaml => output/tsv/pdb-pfam.tsv -< 2023-12-08T19:33:17 pdb-pfam +< 2023-12-15T19:36:03 pdb-pfam togoid-config config/pdb-pfam update # Success: output/tsv/pdb-pfam.tsv is updated -> 2023-12-08T19:33:18 pdb-pfam +> 2023-12-15T19:36:04 pdb-pfam ### Update TSV for pdb-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-uniprot.tsv is newer than config/pdb-uniprot/config.yaml # File output/tsv/pdb-uniprot.tsv has no timestamp file -# File output/tsv/pdb-uniprot.tsv is created 6.702873455486355 days ago (will be updated when >5 days) +# File output/tsv/pdb-uniprot.tsv is created 7.001907939958217 days ago (will be updated when >5 days) ## Update config/pdb-uniprot/config.yaml => output/tsv/pdb-uniprot.tsv -< 2023-12-08T19:33:18 pdb-uniprot +< 2023-12-15T19:36:04 pdb-uniprot togoid-config config/pdb-uniprot update # Success: output/tsv/pdb-uniprot.tsv is updated -> 2023-12-08T19:33:19 pdb-uniprot +> 2023-12-15T19:36:05 pdb-uniprot ### Update TSV for prosite-prosite_prorule if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/prosite-prosite_prorule.tsv is newer than config/prosite-prosite_prorule/config.yaml # File output/tsv/prosite-prosite_prorule.tsv is newer than input/prosite/download.lock @@ -1460,217 +1448,217 @@ togoid-config config/pdb-uniprot update ### Update TSV for pubchem_compound-atc if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true # File output/tsv/pubchem_compound-atc.tsv is older than config/pubchem_compound-atc/config.yaml ## Update config/pubchem_compound-atc/config.yaml => output/tsv/pubchem_compound-atc.tsv -< 2023-12-08T19:33:19 pubchem_compound-atc +< 2023-12-15T19:36:05 pubchem_compound-atc togoid-config config/pubchem_compound-atc update # Error: output/tsv/pubchem_compound-atc.tsv new file size per old 28643 / 72636 = 0.39433614185803184 < 0.5 # Failure: output/tsv/pubchem_compound-atc.tsv is not updated -> 2023-12-08T19:33:20 pubchem_compound-atc +> 2023-12-15T19:36:08 pubchem_compound-atc ### Update TSV for pubchem_compound-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-chebi.tsv is newer than config/pubchem_compound-chebi/config.yaml # File output/tsv/pubchem_compound-chebi.tsv has no timestamp file -# File output/tsv/pubchem_compound-chebi.tsv is created 6.702363741051273 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-chebi.tsv is created 7.00194437389971 days ago (will be updated when >5 days) ## Update config/pubchem_compound-chebi/config.yaml => output/tsv/pubchem_compound-chebi.tsv -< 2023-12-08T19:33:20 pubchem_compound-chebi +< 2023-12-15T19:36:08 pubchem_compound-chebi togoid-config config/pubchem_compound-chebi update # Success: output/tsv/pubchem_compound-chebi.tsv is updated -> 2023-12-08T19:33:20 pubchem_compound-chebi +> 2023-12-15T19:36:14 pubchem_compound-chebi ### Update TSV for pubchem_compound-chembl_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-chembl_compound.tsv is newer than config/pubchem_compound-chembl_compound/config.yaml # File output/tsv/pubchem_compound-chembl_compound.tsv has no timestamp file -# File output/tsv/pubchem_compound-chembl_compound.tsv is created 6.700092132916677 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-chembl_compound.tsv is created 7.001952570511331 days ago (will be updated when >5 days) ## Update config/pubchem_compound-chembl_compound/config.yaml => output/tsv/pubchem_compound-chembl_compound.tsv -< 2023-12-08T19:33:20 pubchem_compound-chembl_compound +< 2023-12-15T19:36:14 pubchem_compound-chembl_compound togoid-config config/pubchem_compound-chembl_compound update # Success: output/tsv/pubchem_compound-chembl_compound.tsv is updated -> 2023-12-08T19:33:25 pubchem_compound-chembl_compound +> 2023-12-15T19:37:17 pubchem_compound-chembl_compound ### Update TSV for pubchem_compound-drugbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-drugbank.tsv is newer than config/pubchem_compound-drugbank/config.yaml # File output/tsv/pubchem_compound-drugbank.tsv has no timestamp file -# File output/tsv/pubchem_compound-drugbank.tsv is created 6.700106982694039 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-drugbank.tsv is created 7.002679098910128 days ago (will be updated when >5 days) ## Update config/pubchem_compound-drugbank/config.yaml => output/tsv/pubchem_compound-drugbank.tsv -< 2023-12-08T19:33:25 pubchem_compound-drugbank +< 2023-12-15T19:37:17 pubchem_compound-drugbank togoid-config config/pubchem_compound-drugbank update # Success: output/tsv/pubchem_compound-drugbank.tsv is updated -> 2023-12-08T19:33:26 pubchem_compound-drugbank +> 2023-12-15T19:37:19 pubchem_compound-drugbank ### Update TSV for pubchem_compound-glytoucan if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-glytoucan.tsv is newer than config/pubchem_compound-glytoucan/config.yaml # File output/tsv/pubchem_compound-glytoucan.tsv has no timestamp file -# File output/tsv/pubchem_compound-glytoucan.tsv is created 6.700100170236598 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-glytoucan.tsv is created 7.002696437338981 days ago (will be updated when >5 days) ## Update config/pubchem_compound-glytoucan/config.yaml => output/tsv/pubchem_compound-glytoucan.tsv -< 2023-12-08T19:33:26 pubchem_compound-glytoucan +< 2023-12-15T19:37:19 pubchem_compound-glytoucan togoid-config config/pubchem_compound-glytoucan update # Success: output/tsv/pubchem_compound-glytoucan.tsv is updated -> 2023-12-08T19:33:26 pubchem_compound-glytoucan +> 2023-12-15T19:37:22 pubchem_compound-glytoucan ### Update TSV for pubchem_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-inchi_key.tsv is newer than config/pubchem_compound-inchi_key/config.yaml # File output/tsv/pubchem_compound-inchi_key.tsv has no timestamp file -# File output/tsv/pubchem_compound-inchi_key.tsv is created 11.283599973976377 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-inchi_key.tsv is created 6.997969869987604 days ago (will be updated when >5 days) ## Update config/pubchem_compound-inchi_key/config.yaml => output/tsv/pubchem_compound-inchi_key.tsv -< 2023-12-08T19:33:26 pubchem_compound-inchi_key +< 2023-12-15T19:37:22 pubchem_compound-inchi_key togoid-config config/pubchem_compound-inchi_key update # Success: output/tsv/pubchem_compound-inchi_key.tsv is updated -> 2023-12-08T19:40:18 pubchem_compound-inchi_key +> 2023-12-15T19:43:41 pubchem_compound-inchi_key ### Update TSV for pubchem_pathway-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-ncbigene.tsv is newer than config/pubchem_pathway-ncbigene/config.yaml # File output/tsv/pubchem_pathway-ncbigene.tsv has no timestamp file -# File output/tsv/pubchem_pathway-ncbigene.tsv is created 6.704792786792709 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-ncbigene.tsv is created 7.002349237725 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-ncbigene/config.yaml => output/tsv/pubchem_pathway-ncbigene.tsv -< 2023-12-08T19:40:18 pubchem_pathway-ncbigene +< 2023-12-15T19:43:41 pubchem_pathway-ncbigene togoid-config config/pubchem_pathway-ncbigene update # Success: output/tsv/pubchem_pathway-ncbigene.tsv is updated -> 2023-12-08T19:40:18 pubchem_pathway-ncbigene +> 2023-12-15T19:43:44 pubchem_pathway-ncbigene ### Update TSV for pubchem_pathway-pathbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-pathbank.tsv is newer than config/pubchem_pathway-pathbank/config.yaml # File output/tsv/pubchem_pathway-pathbank.tsv has no timestamp file -# File output/tsv/pubchem_pathway-pathbank.tsv is created 6.704779593590405 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-pathbank.tsv is created 7.002377510119687 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-pathbank/config.yaml => output/tsv/pubchem_pathway-pathbank.tsv -< 2023-12-08T19:40:18 pubchem_pathway-pathbank +< 2023-12-15T19:43:44 pubchem_pathway-pathbank togoid-config config/pubchem_pathway-pathbank update # Success: output/tsv/pubchem_pathway-pathbank.tsv is updated -> 2023-12-08T19:40:19 pubchem_pathway-pathbank +> 2023-12-15T19:43:48 pubchem_pathway-pathbank ### Update TSV for pubchem_pathway-pubchem_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-pubchem_compound.tsv is newer than config/pubchem_pathway-pubchem_compound/config.yaml # File output/tsv/pubchem_pathway-pubchem_compound.tsv has no timestamp file -# File output/tsv/pubchem_pathway-pubchem_compound.tsv is created 6.704408358813669 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-pubchem_compound.tsv is created 7.002393534171724 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-pubchem_compound/config.yaml => output/tsv/pubchem_pathway-pubchem_compound.tsv -< 2023-12-08T19:40:19 pubchem_pathway-pubchem_compound +< 2023-12-15T19:43:48 pubchem_pathway-pubchem_compound togoid-config config/pubchem_pathway-pubchem_compound update # Success: output/tsv/pubchem_pathway-pubchem_compound.tsv is updated -> 2023-12-08T19:40:21 pubchem_pathway-pubchem_compound +> 2023-12-15T19:44:22 pubchem_pathway-pubchem_compound ### Update TSV for pubchem_pathway-reactome_pathway if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-reactome_pathway.tsv is newer than config/pubchem_pathway-reactome_pathway/config.yaml # File output/tsv/pubchem_pathway-reactome_pathway.tsv has no timestamp file -# File output/tsv/pubchem_pathway-reactome_pathway.tsv is created 6.7044270301498035 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-reactome_pathway.tsv is created 7.002783550646956 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-reactome_pathway/config.yaml => output/tsv/pubchem_pathway-reactome_pathway.tsv -< 2023-12-08T19:40:21 pubchem_pathway-reactome_pathway +< 2023-12-15T19:44:22 pubchem_pathway-reactome_pathway togoid-config config/pubchem_pathway-reactome_pathway update # Success: output/tsv/pubchem_pathway-reactome_pathway.tsv is updated -> 2023-12-08T19:40:22 pubchem_pathway-reactome_pathway +> 2023-12-15T19:44:25 pubchem_pathway-reactome_pathway ### Update TSV for pubchem_pathway-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-uniprot.tsv is newer than config/pubchem_pathway-uniprot/config.yaml # File output/tsv/pubchem_pathway-uniprot.tsv has no timestamp file -# File output/tsv/pubchem_pathway-uniprot.tsv is created 6.703984523270082 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-uniprot.tsv is created 7.002795323596112 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-uniprot/config.yaml => output/tsv/pubchem_pathway-uniprot.tsv -< 2023-12-08T19:40:22 pubchem_pathway-uniprot +< 2023-12-15T19:44:25 pubchem_pathway-uniprot togoid-config config/pubchem_pathway-uniprot update # Success: output/tsv/pubchem_pathway-uniprot.tsv is updated -> 2023-12-08T19:40:23 pubchem_pathway-uniprot +> 2023-12-15T19:44:41 pubchem_pathway-uniprot ### Update TSV for pubchem_pathway-wikipathways if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-wikipathways.tsv is newer than config/pubchem_pathway-wikipathways/config.yaml # File output/tsv/pubchem_pathway-wikipathways.tsv has no timestamp file -# File output/tsv/pubchem_pathway-wikipathways.tsv is created 6.703993188148379 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-wikipathways.tsv is created 7.002981482449143 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-wikipathways/config.yaml => output/tsv/pubchem_pathway-wikipathways.tsv -< 2023-12-08T19:40:23 pubchem_pathway-wikipathways +< 2023-12-15T19:44:41 pubchem_pathway-wikipathways togoid-config config/pubchem_pathway-wikipathways update # Success: output/tsv/pubchem_pathway-wikipathways.tsv is updated -> 2023-12-08T19:40:24 pubchem_pathway-wikipathways +> 2023-12-15T19:44:43 pubchem_pathway-wikipathways ### Update TSV for reactome_pathway-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-chebi.tsv is newer than config/reactome_pathway-chebi/config.yaml # File output/tsv/reactome_pathway-chebi.tsv has no timestamp file -# File output/tsv/reactome_pathway-chebi.tsv is created 11.28840158606846 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-chebi.tsv is created 7.002996929176273 days ago (will be updated when >5 days) ## Update config/reactome_pathway-chebi/config.yaml => output/tsv/reactome_pathway-chebi.tsv -< 2023-12-08T19:40:24 reactome_pathway-chebi +< 2023-12-15T19:44:43 reactome_pathway-chebi togoid-config config/reactome_pathway-chebi update # Success: output/tsv/reactome_pathway-chebi.tsv is updated -> 2023-12-08T19:40:24 reactome_pathway-chebi +> 2023-12-15T19:44:44 reactome_pathway-chebi ### Update TSV for reactome_pathway-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-go.tsv is newer than config/reactome_pathway-go/config.yaml # File output/tsv/reactome_pathway-go.tsv has no timestamp file -# File output/tsv/reactome_pathway-go.tsv is created 6.7039773056264 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-go.tsv is created 7.003000503322419 days ago (will be updated when >5 days) ## Update config/reactome_pathway-go/config.yaml => output/tsv/reactome_pathway-go.tsv -< 2023-12-08T19:40:24 reactome_pathway-go +< 2023-12-15T19:44:44 reactome_pathway-go togoid-config config/reactome_pathway-go update # Success: output/tsv/reactome_pathway-go.tsv is updated -> 2023-12-08T19:40:25 reactome_pathway-go +> 2023-12-15T19:44:44 reactome_pathway-go ### Update TSV for reactome_pathway-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-iuphar_ligand.tsv is newer than config/reactome_pathway-iuphar_ligand/config.yaml # File output/tsv/reactome_pathway-iuphar_ligand.tsv has no timestamp file -# File output/tsv/reactome_pathway-iuphar_ligand.tsv is created 11.288404730861458 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-iuphar_ligand.tsv is created 7.0030016339432635 days ago (will be updated when >5 days) ## Update config/reactome_pathway-iuphar_ligand/config.yaml => output/tsv/reactome_pathway-iuphar_ligand.tsv -< 2023-12-08T19:40:25 reactome_pathway-iuphar_ligand +< 2023-12-15T19:44:44 reactome_pathway-iuphar_ligand togoid-config config/reactome_pathway-iuphar_ligand update # Success: output/tsv/reactome_pathway-iuphar_ligand.tsv is updated -> 2023-12-08T19:40:25 reactome_pathway-iuphar_ligand +> 2023-12-15T19:44:45 reactome_pathway-iuphar_ligand ### Update TSV for reactome_pathway-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-mirbase.tsv is newer than config/reactome_pathway-mirbase/config.yaml # File output/tsv/reactome_pathway-mirbase.tsv has no timestamp file -# File output/tsv/reactome_pathway-mirbase.tsv is created 11.288406611286076 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-mirbase.tsv is created 7.003003307033253 days ago (will be updated when >5 days) ## Update config/reactome_pathway-mirbase/config.yaml => output/tsv/reactome_pathway-mirbase.tsv -< 2023-12-08T19:40:25 reactome_pathway-mirbase +< 2023-12-15T19:44:45 reactome_pathway-mirbase togoid-config config/reactome_pathway-mirbase update # Success: output/tsv/reactome_pathway-mirbase.tsv is updated -> 2023-12-08T19:40:25 reactome_pathway-mirbase +> 2023-12-15T19:44:45 reactome_pathway-mirbase ### Update TSV for reactome_pathway-reactome_reaction if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-reactome_reaction.tsv is newer than config/reactome_pathway-reactome_reaction/config.yaml # File output/tsv/reactome_pathway-reactome_reaction.tsv has no timestamp file -# File output/tsv/reactome_pathway-reactome_reaction.tsv is created 6.7039244163524305 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-reactome_reaction.tsv is created 7.002989228875636 days ago (will be updated when >5 days) ## Update config/reactome_pathway-reactome_reaction/config.yaml => output/tsv/reactome_pathway-reactome_reaction.tsv -< 2023-12-08T19:40:25 reactome_pathway-reactome_reaction +< 2023-12-15T19:44:45 reactome_pathway-reactome_reaction togoid-config config/reactome_pathway-reactome_reaction update # Success: output/tsv/reactome_pathway-reactome_reaction.tsv is updated -> 2023-12-08T19:40:27 reactome_pathway-reactome_reaction +> 2023-12-15T19:44:46 reactome_pathway-reactome_reaction ### Update TSV for reactome_pathway-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-uniprot.tsv is newer than config/reactome_pathway-uniprot/config.yaml # File output/tsv/reactome_pathway-uniprot.tsv has no timestamp file -# File output/tsv/reactome_pathway-uniprot.tsv is created 11.288404738482674 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-uniprot.tsv is created 7.002991493096852 days ago (will be updated when >5 days) ## Update config/reactome_pathway-uniprot/config.yaml => output/tsv/reactome_pathway-uniprot.tsv -< 2023-12-08T19:40:27 reactome_pathway-uniprot +< 2023-12-15T19:44:46 reactome_pathway-uniprot togoid-config config/reactome_pathway-uniprot update # Success: output/tsv/reactome_pathway-uniprot.tsv is updated -> 2023-12-08T19:40:28 reactome_pathway-uniprot +> 2023-12-15T19:44:48 reactome_pathway-uniprot ### Update TSV for reactome_reaction-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_reaction-chebi.tsv is newer than config/reactome_reaction-chebi/config.yaml # File output/tsv/reactome_reaction-chebi.tsv has no timestamp file -# File output/tsv/reactome_reaction-chebi.tsv is created 11.288412679188436 days ago (will be updated when >5 days) +# File output/tsv/reactome_reaction-chebi.tsv is created 7.00300340724632 days ago (will be updated when >5 days) ## Update config/reactome_reaction-chebi/config.yaml => output/tsv/reactome_reaction-chebi.tsv -< 2023-12-08T19:40:28 reactome_reaction-chebi +< 2023-12-15T19:44:48 reactome_reaction-chebi togoid-config config/reactome_reaction-chebi update # Success: output/tsv/reactome_reaction-chebi.tsv is updated -> 2023-12-08T19:40:29 reactome_reaction-chebi +> 2023-12-15T19:44:49 reactome_reaction-chebi ### Update TSV for reactome_reaction-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_reaction-go.tsv is newer than config/reactome_reaction-go/config.yaml # File output/tsv/reactome_reaction-go.tsv has no timestamp file -# File output/tsv/reactome_reaction-go.tsv is created 6.703954272369444 days ago (will be updated when >5 days) +# File output/tsv/reactome_reaction-go.tsv is created 7.003005132130186 days ago (will be updated when >5 days) ## Update config/reactome_reaction-go/config.yaml => output/tsv/reactome_reaction-go.tsv -< 2023-12-08T19:40:29 reactome_reaction-go +< 2023-12-15T19:44:49 reactome_reaction-go togoid-config config/reactome_reaction-go update # Success: output/tsv/reactome_reaction-go.tsv is updated -> 2023-12-08T19:40:29 reactome_reaction-go +> 2023-12-15T19:44:49 reactome_reaction-go ### Update TSV for reactome_reaction-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_reaction-iuphar_ligand.tsv is newer than config/reactome_reaction-iuphar_ligand/config.yaml # File output/tsv/reactome_reaction-iuphar_ligand.tsv has no timestamp file -# File output/tsv/reactome_reaction-iuphar_ligand.tsv is created 11.288414456538506 days ago (will be updated when >5 days) +# File output/tsv/reactome_reaction-iuphar_ligand.tsv is created 7.003006883816898 days ago (will be updated when >5 days) ## Update config/reactome_reaction-iuphar_ligand/config.yaml => output/tsv/reactome_reaction-iuphar_ligand.tsv -< 2023-12-08T19:40:29 reactome_reaction-iuphar_ligand +< 2023-12-15T19:44:49 reactome_reaction-iuphar_ligand togoid-config config/reactome_reaction-iuphar_ligand update # Success: output/tsv/reactome_reaction-iuphar_ligand.tsv is updated -> 2023-12-08T19:40:29 reactome_reaction-iuphar_ligand +> 2023-12-15T19:44:49 reactome_reaction-iuphar_ligand ### Update TSV for reactome_reaction-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_reaction-mirbase.tsv is newer than config/reactome_reaction-mirbase/config.yaml # File output/tsv/reactome_reaction-mirbase.tsv has no timestamp file -# File output/tsv/reactome_reaction-mirbase.tsv is created 11.288414892987477 days ago (will be updated when >5 days) +# File output/tsv/reactome_reaction-mirbase.tsv is created 7.003008206946018 days ago (will be updated when >5 days) ## Update config/reactome_reaction-mirbase/config.yaml => output/tsv/reactome_reaction-mirbase.tsv -< 2023-12-08T19:40:29 reactome_reaction-mirbase +< 2023-12-15T19:44:49 reactome_reaction-mirbase togoid-config config/reactome_reaction-mirbase update # Success: output/tsv/reactome_reaction-mirbase.tsv is updated -> 2023-12-08T19:40:29 reactome_reaction-mirbase +> 2023-12-15T19:44:49 reactome_reaction-mirbase ### Update TSV for reactome_reaction-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_reaction-uniprot.tsv is newer than config/reactome_reaction-uniprot/config.yaml # File output/tsv/reactome_reaction-uniprot.tsv has no timestamp file -# File output/tsv/reactome_reaction-uniprot.tsv is created 11.288403166575728 days ago (will be updated when >5 days) +# File output/tsv/reactome_reaction-uniprot.tsv is created 7.002997556561956 days ago (will be updated when >5 days) ## Update config/reactome_reaction-uniprot/config.yaml => output/tsv/reactome_reaction-uniprot.tsv -< 2023-12-08T19:40:29 reactome_reaction-uniprot +< 2023-12-15T19:44:49 reactome_reaction-uniprot togoid-config config/reactome_reaction-uniprot update # Success: output/tsv/reactome_reaction-uniprot.tsv is updated -> 2023-12-08T19:40:30 reactome_reaction-uniprot +> 2023-12-15T19:44:51 reactome_reaction-uniprot ### Update TSV for refseq_protein-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/refseq_protein-uniprot.tsv is newer than config/refseq_protein-uniprot/config.yaml # File output/tsv/refseq_protein-uniprot.tsv is older than input/refseq_protein/download.lock ## Update config/refseq_protein-uniprot/config.yaml => output/tsv/refseq_protein-uniprot.tsv -< 2023-12-08T19:40:30 refseq_protein-uniprot +< 2023-12-15T19:44:51 refseq_protein-uniprot togoid-config config/refseq_protein-uniprot update # Success: output/tsv/refseq_protein-uniprot.tsv is updated -> 2023-12-08T19:48:21 refseq_protein-uniprot +> 2023-12-15T19:51:18 refseq_protein-uniprot ### Update TSV for refseq_rna-dbsnp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/refseq_rna-dbsnp.tsv is newer than config/refseq_rna-dbsnp/config.yaml # File output/tsv/refseq_rna-dbsnp.tsv is newer than input/refseq_rna/download.lock @@ -1726,281 +1714,281 @@ togoid-config config/refseq_protein-uniprot update ### Update TSV for sra_accession-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_accession-bioproject.tsv is newer than config/sra_accession-bioproject/config.yaml # File output/tsv/sra_accession-bioproject.tsv has no timestamp file -# File output/tsv/sra_accession-bioproject.tsv is created 11.28669955125624 days ago (will be updated when >5 days) +# File output/tsv/sra_accession-bioproject.tsv is created 7.001049498174259 days ago (will be updated when >5 days) ## Update config/sra_accession-bioproject/config.yaml => output/tsv/sra_accession-bioproject.tsv -< 2023-12-08T19:48:21 sra_accession-bioproject +< 2023-12-15T19:51:19 sra_accession-bioproject togoid-config config/sra_accession-bioproject update # Success: output/tsv/sra_accession-bioproject.tsv is updated -> 2023-12-08T19:49:48 sra_accession-bioproject +> 2023-12-15T19:53:02 sra_accession-bioproject ### Update TSV for sra_accession-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_accession-biosample.tsv is newer than config/sra_accession-biosample/config.yaml # File output/tsv/sra_accession-biosample.tsv has no timestamp file -# File output/tsv/sra_accession-biosample.tsv is created 11.282995773899295 days ago (will be updated when >5 days) +# File output/tsv/sra_accession-biosample.tsv is created 6.9976041946337375 days ago (will be updated when >5 days) ## Update config/sra_accession-biosample/config.yaml => output/tsv/sra_accession-biosample.tsv -< 2023-12-08T19:49:48 sra_accession-biosample +< 2023-12-15T19:53:02 sra_accession-biosample togoid-config config/sra_accession-biosample update # Success: output/tsv/sra_accession-biosample.tsv is updated -> 2023-12-08T19:56:29 sra_accession-biosample +> 2023-12-15T19:59:44 sra_accession-biosample ### Update TSV for sra_accession-sra_analysis if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_accession-sra_analysis.tsv is newer than config/sra_accession-sra_analysis/config.yaml # File output/tsv/sra_accession-sra_analysis.tsv has no timestamp file -# File output/tsv/sra_accession-sra_analysis.tsv is created 11.286943421481494 days ago (will be updated when >5 days) +# File output/tsv/sra_accession-sra_analysis.tsv is created 7.001593654702975 days ago (will be updated when >5 days) ## Update config/sra_accession-sra_analysis/config.yaml => output/tsv/sra_accession-sra_analysis.tsv -< 2023-12-08T19:56:29 sra_accession-sra_analysis +< 2023-12-15T19:59:44 sra_accession-sra_analysis togoid-config config/sra_accession-sra_analysis update # Success: output/tsv/sra_accession-sra_analysis.tsv is updated -> 2023-12-08T19:57:27 sra_accession-sra_analysis +> 2023-12-15T20:00:43 sra_accession-sra_analysis ### Update TSV for sra_accession-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_accession-sra_experiment.tsv is newer than config/sra_accession-sra_experiment/config.yaml # File output/tsv/sra_accession-sra_experiment.tsv has no timestamp file -# File output/tsv/sra_accession-sra_experiment.tsv is created 11.283412663716064 days ago (will be updated when >5 days) +# File output/tsv/sra_accession-sra_experiment.tsv is created 6.998136053275486 days ago (will be updated when >5 days) ## Update config/sra_accession-sra_experiment/config.yaml => output/tsv/sra_accession-sra_experiment.tsv -< 2023-12-08T19:57:27 sra_accession-sra_experiment +< 2023-12-15T20:00:43 sra_accession-sra_experiment togoid-config config/sra_accession-sra_experiment update # Success: output/tsv/sra_accession-sra_experiment.tsv is updated -> 2023-12-08T20:03:24 sra_accession-sra_experiment +> 2023-12-15T20:06:44 sra_accession-sra_experiment ### Update TSV for sra_accession-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_accession-sra_project.tsv is newer than config/sra_accession-sra_project/config.yaml # File output/tsv/sra_accession-sra_project.tsv has no timestamp file -# File output/tsv/sra_accession-sra_project.tsv is created 11.286818833673959 days ago (will be updated when >5 days) +# File output/tsv/sra_accession-sra_project.tsv is created 7.00163077536706 days ago (will be updated when >5 days) ## Update config/sra_accession-sra_project/config.yaml => output/tsv/sra_accession-sra_project.tsv -< 2023-12-08T20:03:24 sra_accession-sra_project +< 2023-12-15T20:06:44 sra_accession-sra_project togoid-config config/sra_accession-sra_project update # Success: output/tsv/sra_accession-sra_project.tsv is updated -> 2023-12-08T20:04:23 sra_accession-sra_project +> 2023-12-15T20:07:42 sra_accession-sra_project ### Update TSV for sra_accession-sra_run if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_accession-sra_run.tsv is newer than config/sra_accession-sra_run/config.yaml # File output/tsv/sra_accession-sra_run.tsv has no timestamp file -# File output/tsv/sra_accession-sra_run.tsv is created 11.282809638251829 days ago (will be updated when >5 days) +# File output/tsv/sra_accession-sra_run.tsv is created 6.997615612057744 days ago (will be updated when >5 days) ## Update config/sra_accession-sra_run/config.yaml => output/tsv/sra_accession-sra_run.tsv -< 2023-12-08T20:04:23 sra_accession-sra_run +< 2023-12-15T20:07:42 sra_accession-sra_run togoid-config config/sra_accession-sra_run update # Success: output/tsv/sra_accession-sra_run.tsv is updated -> 2023-12-08T20:11:08 sra_accession-sra_run +> 2023-12-15T20:14:27 sra_accession-sra_run ### Update TSV for sra_accession-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_accession-sra_sample.tsv is newer than config/sra_accession-sra_sample/config.yaml # File output/tsv/sra_accession-sra_sample.tsv has no timestamp file -# File output/tsv/sra_accession-sra_sample.tsv is created 11.28360381532544 days ago (will be updated when >5 days) +# File output/tsv/sra_accession-sra_sample.tsv is created 6.998219518358357 days ago (will be updated when >5 days) ## Update config/sra_accession-sra_sample/config.yaml => output/tsv/sra_accession-sra_sample.tsv -< 2023-12-08T20:11:08 sra_accession-sra_sample +< 2023-12-15T20:14:27 sra_accession-sra_sample togoid-config config/sra_accession-sra_sample update # Success: output/tsv/sra_accession-sra_sample.tsv is updated -> 2023-12-08T20:17:01 sra_accession-sra_sample +> 2023-12-15T20:20:15 sra_accession-sra_sample ### Update TSV for sra_experiment-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_experiment-bioproject.tsv is newer than config/sra_experiment-bioproject/config.yaml # File output/tsv/sra_experiment-bioproject.tsv has no timestamp file -# File output/tsv/sra_experiment-bioproject.tsv is created 11.285463823234434 days ago (will be updated when >5 days) +# File output/tsv/sra_experiment-bioproject.tsv is created 6.9999805424774655 days ago (will be updated when >5 days) ## Update config/sra_experiment-bioproject/config.yaml => output/tsv/sra_experiment-bioproject.tsv -< 2023-12-08T20:17:01 sra_experiment-bioproject +< 2023-12-15T20:20:15 sra_experiment-bioproject togoid-config config/sra_experiment-bioproject update # Success: output/tsv/sra_experiment-bioproject.tsv is updated -> 2023-12-08T20:20:17 sra_experiment-bioproject +> 2023-12-15T20:23:37 sra_experiment-bioproject ### Update TSV for sra_experiment-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_experiment-biosample.tsv is newer than config/sra_experiment-biosample/config.yaml # File output/tsv/sra_experiment-biosample.tsv has no timestamp file -# File output/tsv/sra_experiment-biosample.tsv is created 11.285620182334537 days ago (will be updated when >5 days) +# File output/tsv/sra_experiment-biosample.tsv is created 7.000059223774097 days ago (will be updated when >5 days) ## Update config/sra_experiment-biosample/config.yaml => output/tsv/sra_experiment-biosample.tsv -< 2023-12-08T20:20:17 sra_experiment-biosample +< 2023-12-15T20:23:37 sra_experiment-biosample togoid-config config/sra_experiment-biosample update # Success: output/tsv/sra_experiment-biosample.tsv is updated -> 2023-12-08T20:23:32 sra_experiment-biosample +> 2023-12-15T20:26:38 sra_experiment-biosample ### Update TSV for sra_experiment-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_experiment-sra_project.tsv is newer than config/sra_experiment-sra_project/config.yaml # File output/tsv/sra_experiment-sra_project.tsv has no timestamp file -# File output/tsv/sra_experiment-sra_project.tsv is created 11.286047520818691 days ago (will be updated when >5 days) +# File output/tsv/sra_experiment-sra_project.tsv is created 7.000239670345302 days ago (will be updated when >5 days) ## Update config/sra_experiment-sra_project/config.yaml => output/tsv/sra_experiment-sra_project.tsv -< 2023-12-08T20:23:32 sra_experiment-sra_project +< 2023-12-15T20:26:38 sra_experiment-sra_project togoid-config config/sra_experiment-sra_project update # Success: output/tsv/sra_experiment-sra_project.tsv is updated -> 2023-12-08T20:26:17 sra_experiment-sra_project +> 2023-12-15T20:29:12 sra_experiment-sra_project ### Update TSV for sra_experiment-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_experiment-sra_sample.tsv is newer than config/sra_experiment-sra_sample/config.yaml # File output/tsv/sra_experiment-sra_sample.tsv has no timestamp file -# File output/tsv/sra_experiment-sra_sample.tsv is created 11.286228255388865 days ago (will be updated when >5 days) +# File output/tsv/sra_experiment-sra_sample.tsv is created 7.000119330366388 days ago (will be updated when >5 days) ## Update config/sra_experiment-sra_sample/config.yaml => output/tsv/sra_experiment-sra_sample.tsv -< 2023-12-08T20:26:17 sra_experiment-sra_sample +< 2023-12-15T20:29:12 sra_experiment-sra_sample togoid-config config/sra_experiment-sra_sample update # Success: output/tsv/sra_experiment-sra_sample.tsv is updated -> 2023-12-08T20:29:01 sra_experiment-sra_sample +> 2023-12-15T20:31:51 sra_experiment-sra_sample ### Update TSV for sra_project-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_project-bioproject.tsv is newer than config/sra_project-bioproject/config.yaml # File output/tsv/sra_project-bioproject.tsv has no timestamp file -# File output/tsv/sra_project-bioproject.tsv is created 11.287430723679607 days ago (will be updated when >5 days) +# File output/tsv/sra_project-bioproject.tsv is created 7.001268474090046 days ago (will be updated when >5 days) ## Update config/sra_project-bioproject/config.yaml => output/tsv/sra_project-bioproject.tsv -< 2023-12-08T20:29:01 sra_project-bioproject +< 2023-12-15T20:31:51 sra_project-bioproject togoid-config config/sra_project-bioproject update # Success: output/tsv/sra_project-bioproject.tsv is updated -> 2023-12-08T20:30:01 sra_project-bioproject +> 2023-12-15T20:32:51 sra_project-bioproject ### Update TSV for sra_run-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_run-bioproject.tsv is newer than config/sra_run-bioproject/config.yaml # File output/tsv/sra_run-bioproject.tsv has no timestamp file -# File output/tsv/sra_run-bioproject.tsv is created 11.285590862740312 days ago (will be updated when >5 days) +# File output/tsv/sra_run-bioproject.tsv is created 6.999446967272523 days ago (will be updated when >5 days) ## Update config/sra_run-bioproject/config.yaml => output/tsv/sra_run-bioproject.tsv -< 2023-12-08T20:30:01 sra_run-bioproject +< 2023-12-15T20:32:51 sra_run-bioproject togoid-config config/sra_run-bioproject update # Success: output/tsv/sra_run-bioproject.tsv is updated -> 2023-12-08T20:33:39 sra_run-bioproject +> 2023-12-15T20:36:28 sra_run-bioproject ### Update TSV for sra_run-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_run-biosample.tsv is newer than config/sra_run-biosample/config.yaml # File output/tsv/sra_run-biosample.tsv has no timestamp file -# File output/tsv/sra_run-biosample.tsv is created 11.285730384154306 days ago (will be updated when >5 days) +# File output/tsv/sra_run-biosample.tsv is created 6.999595670064005 days ago (will be updated when >5 days) ## Update config/sra_run-biosample/config.yaml => output/tsv/sra_run-biosample.tsv -< 2023-12-08T20:33:39 sra_run-biosample +< 2023-12-15T20:36:28 sra_run-biosample togoid-config config/sra_run-biosample update # Success: output/tsv/sra_run-biosample.tsv is updated -> 2023-12-08T20:37:03 sra_run-biosample +> 2023-12-15T20:39:58 sra_run-biosample ### Update TSV for sra_run-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_run-sra_experiment.tsv is newer than config/sra_run-sra_experiment/config.yaml # File output/tsv/sra_run-sra_experiment.tsv has no timestamp file -# File output/tsv/sra_run-sra_experiment.tsv is created 11.286261164999896 days ago (will be updated when >5 days) +# File output/tsv/sra_run-sra_experiment.tsv is created 7.000215104275509 days ago (will be updated when >5 days) ## Update config/sra_run-sra_experiment/config.yaml => output/tsv/sra_run-sra_experiment.tsv -< 2023-12-08T20:37:03 sra_run-sra_experiment +< 2023-12-15T20:39:58 sra_run-sra_experiment togoid-config config/sra_run-sra_experiment update # Success: output/tsv/sra_run-sra_experiment.tsv is updated -> 2023-12-08T20:39:39 sra_run-sra_experiment +> 2023-12-15T20:42:50 sra_run-sra_experiment ### Update TSV for sra_run-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_run-sra_project.tsv is newer than config/sra_run-sra_project/config.yaml # File output/tsv/sra_run-sra_project.tsv has no timestamp file -# File output/tsv/sra_run-sra_project.tsv is created 11.286037543106644 days ago (will be updated when >5 days) +# File output/tsv/sra_run-sra_project.tsv is created 7.000096982672246 days ago (will be updated when >5 days) ## Update config/sra_run-sra_project/config.yaml => output/tsv/sra_run-sra_project.tsv -< 2023-12-08T20:39:39 sra_run-sra_project +< 2023-12-15T20:42:50 sra_run-sra_project togoid-config config/sra_run-sra_project update # Success: output/tsv/sra_run-sra_project.tsv is updated -> 2023-12-08T20:42:42 sra_run-sra_project +> 2023-12-15T20:45:38 sra_run-sra_project ### Update TSV for sra_run-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_run-sra_sample.tsv is newer than config/sra_run-sra_sample/config.yaml # File output/tsv/sra_run-sra_sample.tsv has no timestamp file -# File output/tsv/sra_run-sra_sample.tsv is created 11.28608431200751 days ago (will be updated when >5 days) +# File output/tsv/sra_run-sra_sample.tsv is created 7.000156345342627 days ago (will be updated when >5 days) ## Update config/sra_run-sra_sample/config.yaml => output/tsv/sra_run-sra_sample.tsv -< 2023-12-08T20:42:42 sra_run-sra_sample +< 2023-12-15T20:45:38 sra_run-sra_sample togoid-config config/sra_run-sra_sample update # Success: output/tsv/sra_run-sra_sample.tsv is updated -> 2023-12-08T20:45:24 sra_run-sra_sample +> 2023-12-15T20:48:32 sra_run-sra_sample ### Update TSV for sra_sample-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/sra_sample-biosample.tsv is newer than config/sra_sample-biosample/config.yaml # File output/tsv/sra_sample-biosample.tsv has no timestamp file -# File output/tsv/sra_sample-biosample.tsv is created 11.286075906009641 days ago (will be updated when >5 days) +# File output/tsv/sra_sample-biosample.tsv is created 7.000136931351228 days ago (will be updated when >5 days) ## Update config/sra_sample-biosample/config.yaml => output/tsv/sra_sample-biosample.tsv -< 2023-12-08T20:45:24 sra_sample-biosample +< 2023-12-15T20:48:32 sra_sample-biosample togoid-config config/sra_sample-biosample update # Success: output/tsv/sra_sample-biosample.tsv is updated -> 2023-12-08T20:48:20 sra_sample-biosample +> 2023-12-15T20:51:33 sra_sample-biosample ### Update TSV for swisslipids-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/swisslipids-chebi.tsv is newer than config/swisslipids-chebi/config.yaml # File output/tsv/swisslipids-chebi.tsv is older than input/swisslipids/download.lock ## Update config/swisslipids-chebi/config.yaml => output/tsv/swisslipids-chebi.tsv -< 2023-12-08T20:48:21 swisslipids-chebi +< 2023-12-15T20:51:33 swisslipids-chebi togoid-config config/swisslipids-chebi update # Success: output/tsv/swisslipids-chebi.tsv is updated -> 2023-12-08T20:48:35 swisslipids-chebi +> 2023-12-15T20:51:47 swisslipids-chebi ### Update TSV for swisslipids-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/swisslipids-hmdb.tsv is newer than config/swisslipids-hmdb/config.yaml # File output/tsv/swisslipids-hmdb.tsv is older than input/swisslipids/download.lock ## Update config/swisslipids-hmdb/config.yaml => output/tsv/swisslipids-hmdb.tsv -< 2023-12-08T20:48:35 swisslipids-hmdb +< 2023-12-15T20:51:47 swisslipids-hmdb togoid-config config/swisslipids-hmdb update # Success: output/tsv/swisslipids-hmdb.tsv is updated -> 2023-12-08T20:48:48 swisslipids-hmdb +> 2023-12-15T20:52:01 swisslipids-hmdb ### Update TSV for swisslipids-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/swisslipids-inchi_key.tsv is newer than config/swisslipids-inchi_key/config.yaml # File output/tsv/swisslipids-inchi_key.tsv is older than input/swisslipids/download.lock ## Update config/swisslipids-inchi_key/config.yaml => output/tsv/swisslipids-inchi_key.tsv -< 2023-12-08T20:48:48 swisslipids-inchi_key +< 2023-12-15T20:52:01 swisslipids-inchi_key togoid-config config/swisslipids-inchi_key update # Success: output/tsv/swisslipids-inchi_key.tsv is updated -> 2023-12-08T20:49:01 swisslipids-inchi_key +> 2023-12-15T20:52:13 swisslipids-inchi_key ### Update TSV for taxonomy-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/taxonomy-pubmed.tsv is newer than config/taxonomy-pubmed/config.yaml # File output/tsv/taxonomy-pubmed.tsv is older than input/taxonomy/download.lock ## Update config/taxonomy-pubmed/config.yaml => output/tsv/taxonomy-pubmed.tsv -< 2023-12-08T20:49:01 taxonomy-pubmed +< 2023-12-15T20:52:13 taxonomy-pubmed togoid-config config/taxonomy-pubmed update awk: cmd. line:1: warning: escape sequence `\|' treated as plain `|' # Success: output/tsv/taxonomy-pubmed.tsv is updated -> 2023-12-08T20:49:01 taxonomy-pubmed +> 2023-12-15T20:52:14 taxonomy-pubmed ### Update TSV for togovar-clinvar if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-clinvar.tsv is newer than config/togovar-clinvar/config.yaml # File output/tsv/togovar-clinvar.tsv has no timestamp file -# File output/tsv/togovar-clinvar.tsv is created 41.99062072395141 days ago (will be updated when >5 days) +# File output/tsv/togovar-clinvar.tsv is created 48.99285122517637 days ago (will be updated when >5 days) ## Update config/togovar-clinvar/config.yaml => output/tsv/togovar-clinvar.tsv -< 2023-12-08T20:49:01 togovar-clinvar +< 2023-12-15T20:52:14 togovar-clinvar togoid-config config/togovar-clinvar update # Error: output/tsv/togovar-clinvar.tsv new file size per old 0 / 13681182 = 0.0 < 0.5 # Error: Failed to create output/tsv/togovar-clinvar.tsv or created file was empty # Failure: output/tsv/togovar-clinvar.tsv is not updated -> 2023-12-08T20:49:33 togovar-clinvar +> 2023-12-15T20:52:36 togovar-clinvar ### Update TSV for togovar-dbsnp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-dbsnp.tsv is newer than config/togovar-dbsnp/config.yaml # File output/tsv/togovar-dbsnp.tsv has no timestamp file -# File output/tsv/togovar-dbsnp.tsv is created 11.2876757004589 days ago (will be updated when >5 days) +# File output/tsv/togovar-dbsnp.tsv is created 7.001703639673148 days ago (will be updated when >5 days) ## Update config/togovar-dbsnp/config.yaml => output/tsv/togovar-dbsnp.tsv -< 2023-12-08T20:49:33 togovar-dbsnp +< 2023-12-15T20:52:36 togovar-dbsnp togoid-config config/togovar-dbsnp update # Success: output/tsv/togovar-dbsnp.tsv is updated -> 2023-12-08T20:50:09 togovar-dbsnp +> 2023-12-15T20:53:10 togovar-dbsnp ### Update TSV for togovar-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-ensembl_gene.tsv is newer than config/togovar-ensembl_gene/config.yaml # File output/tsv/togovar-ensembl_gene.tsv has no timestamp file -# File output/tsv/togovar-ensembl_gene.tsv is created 11.28745655575338 days ago (will be updated when >5 days) +# File output/tsv/togovar-ensembl_gene.tsv is created 7.001646345147893 days ago (will be updated when >5 days) ## Update config/togovar-ensembl_gene/config.yaml => output/tsv/togovar-ensembl_gene.tsv -< 2023-12-08T20:50:09 togovar-ensembl_gene +< 2023-12-15T20:53:10 togovar-ensembl_gene togoid-config config/togovar-ensembl_gene update # Success: output/tsv/togovar-ensembl_gene.tsv is updated -> 2023-12-08T20:50:48 togovar-ensembl_gene +> 2023-12-15T20:53:48 togovar-ensembl_gene ### Update TSV for togovar-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-ensembl_transcript.tsv is newer than config/togovar-ensembl_transcript/config.yaml # File output/tsv/togovar-ensembl_transcript.tsv has no timestamp file -# File output/tsv/togovar-ensembl_transcript.tsv is created 11.285889784324524 days ago (will be updated when >5 days) +# File output/tsv/togovar-ensembl_transcript.tsv is created 7.000214708732616 days ago (will be updated when >5 days) ## Update config/togovar-ensembl_transcript/config.yaml => output/tsv/togovar-ensembl_transcript.tsv -< 2023-12-08T20:50:48 togovar-ensembl_transcript +< 2023-12-15T20:53:48 togovar-ensembl_transcript togoid-config config/togovar-ensembl_transcript update # Success: output/tsv/togovar-ensembl_transcript.tsv is updated -> 2023-12-08T20:53:29 togovar-ensembl_transcript +> 2023-12-15T20:56:24 togovar-ensembl_transcript ### Update TSV for togovar-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-hgnc.tsv is newer than config/togovar-hgnc/config.yaml # File output/tsv/togovar-hgnc.tsv has no timestamp file -# File output/tsv/togovar-hgnc.tsv is created 11.287436385073542 days ago (will be updated when >5 days) +# File output/tsv/togovar-hgnc.tsv is created 7.001757172788947 days ago (will be updated when >5 days) ## Update config/togovar-hgnc/config.yaml => output/tsv/togovar-hgnc.tsv -< 2023-12-08T20:53:29 togovar-hgnc +< 2023-12-15T20:56:24 togovar-hgnc togoid-config config/togovar-hgnc update # Success: output/tsv/togovar-hgnc.tsv is updated -> 2023-12-08T20:53:53 togovar-hgnc +> 2023-12-15T20:56:48 togovar-hgnc ### Update TSV for togovar-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-ncbigene.tsv is newer than config/togovar-ncbigene/config.yaml # File output/tsv/togovar-ncbigene.tsv has no timestamp file -# File output/tsv/togovar-ncbigene.tsv is created 11.287432316815428 days ago (will be updated when >5 days) +# File output/tsv/togovar-ncbigene.tsv is created 7.0017561869300575 days ago (will be updated when >5 days) ## Update config/togovar-ncbigene/config.yaml => output/tsv/togovar-ncbigene.tsv -< 2023-12-08T20:53:53 togovar-ncbigene +< 2023-12-15T20:56:48 togovar-ncbigene togoid-config config/togovar-ncbigene update # Success: output/tsv/togovar-ncbigene.tsv is updated -> 2023-12-08T20:54:16 togovar-ncbigene +> 2023-12-15T20:57:11 togovar-ncbigene ### Update TSV for togovar-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-pubmed.tsv is newer than config/togovar-pubmed/config.yaml # File output/tsv/togovar-pubmed.tsv has no timestamp file -# File output/tsv/togovar-pubmed.tsv is created 11.287690065769455 days ago (will be updated when >5 days) +# File output/tsv/togovar-pubmed.tsv is created 7.002015897067268 days ago (will be updated when >5 days) ## Update config/togovar-pubmed/config.yaml => output/tsv/togovar-pubmed.tsv -< 2023-12-08T20:54:16 togovar-pubmed +< 2023-12-15T20:57:11 togovar-pubmed togoid-config config/togovar-pubmed update # Success: output/tsv/togovar-pubmed.tsv is updated -> 2023-12-08T20:54:17 togovar-pubmed +> 2023-12-15T20:57:12 togovar-pubmed ### Update TSV for togovar-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-refseq_rna.tsv is newer than config/togovar-refseq_rna/config.yaml # File output/tsv/togovar-refseq_rna.tsv has no timestamp file -# File output/tsv/togovar-refseq_rna.tsv is created 11.28669020864346 days ago (will be updated when >5 days) +# File output/tsv/togovar-refseq_rna.tsv is created 7.001057897155301 days ago (will be updated when >5 days) ## Update config/togovar-refseq_rna/config.yaml => output/tsv/togovar-refseq_rna.tsv -< 2023-12-08T20:54:17 togovar-refseq_rna +< 2023-12-15T20:57:12 togovar-refseq_rna togoid-config config/togovar-refseq_rna update # Success: output/tsv/togovar-refseq_rna.tsv is updated -> 2023-12-08T20:55:40 togovar-refseq_rna +> 2023-12-15T20:58:37 togovar-refseq_rna ### Update TSV for uberon-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/uberon-ncit_tissue.tsv is newer than config/uberon-ncit_tissue/config.yaml # File output/tsv/uberon-ncit_tissue.tsv has no timestamp file -# File output/tsv/uberon-ncit_tissue.tsv is created 11.287628252255821 days ago (will be updated when >5 days) +# File output/tsv/uberon-ncit_tissue.tsv is created 7.00202654304684 days ago (will be updated when >5 days) ## Update config/uberon-ncit_tissue/config.yaml => output/tsv/uberon-ncit_tissue.tsv -< 2023-12-08T20:55:40 uberon-ncit_tissue +< 2023-12-15T20:58:37 uberon-ncit_tissue togoid-config config/uberon-ncit_tissue update # Success: output/tsv/uberon-ncit_tissue.tsv is updated -> 2023-12-08T20:55:42 uberon-ncit_tissue +> 2023-12-15T20:58:41 uberon-ncit_tissue ### Update TSV for uniprot-chembl_target if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/uniprot-chembl_target.tsv is newer than config/uniprot-chembl_target/config.yaml # File output/tsv/uniprot-chembl_target.tsv is newer than input/uniprot/download.lock @@ -2080,95 +2068,95 @@ togoid-config config/uberon-ncit_tissue update ### Update TSV for uniprot_reference_proteome-assembly_insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is newer than config/uniprot_reference_proteome-assembly_insdc/config.yaml # File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv has no timestamp file -# File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is created 11.287642198169884 days ago (will be updated when >5 days) +# File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is created 7.002062257875313 days ago (will be updated when >5 days) ## Update config/uniprot_reference_proteome-assembly_insdc/config.yaml => output/tsv/uniprot_reference_proteome-assembly_insdc.tsv -< 2023-12-08T20:55:42 uniprot_reference_proteome-assembly_insdc +< 2023-12-15T20:58:41 uniprot_reference_proteome-assembly_insdc togoid-config config/uniprot_reference_proteome-assembly_insdc update # Success: output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is updated -> 2023-12-08T20:55:43 uniprot_reference_proteome-assembly_insdc +> 2023-12-15T20:58:42 uniprot_reference_proteome-assembly_insdc ### Update TSV for uniprot_reference_proteome-assembly_refseq if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is newer than config/uniprot_reference_proteome-assembly_refseq/config.yaml # File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv has no timestamp file -# File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is created 11.287643649649016 days ago (will be updated when >5 days) +# File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is created 7.002063991350185 days ago (will be updated when >5 days) ## Update config/uniprot_reference_proteome-assembly_refseq/config.yaml => output/tsv/uniprot_reference_proteome-assembly_refseq.tsv -< 2023-12-08T20:55:43 uniprot_reference_proteome-assembly_refseq +< 2023-12-15T20:58:42 uniprot_reference_proteome-assembly_refseq togoid-config config/uniprot_reference_proteome-assembly_refseq update # Success: output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is updated -> 2023-12-08T20:55:43 uniprot_reference_proteome-assembly_refseq +> 2023-12-15T20:58:42 uniprot_reference_proteome-assembly_refseq ### Update TSV for uniprot_reference_proteome-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/uniprot_reference_proteome-taxonomy.tsv is newer than config/uniprot_reference_proteome-taxonomy/config.yaml # File output/tsv/uniprot_reference_proteome-taxonomy.tsv has no timestamp file -# File output/tsv/uniprot_reference_proteome-taxonomy.tsv is created 11.287644349806806 days ago (will be updated when >5 days) +# File output/tsv/uniprot_reference_proteome-taxonomy.tsv is created 7.002063703413195 days ago (will be updated when >5 days) ## Update config/uniprot_reference_proteome-taxonomy/config.yaml => output/tsv/uniprot_reference_proteome-taxonomy.tsv -< 2023-12-08T20:55:43 uniprot_reference_proteome-taxonomy +< 2023-12-15T20:58:42 uniprot_reference_proteome-taxonomy togoid-config config/uniprot_reference_proteome-taxonomy update # Success: output/tsv/uniprot_reference_proteome-taxonomy.tsv is updated -> 2023-12-08T20:55:44 uniprot_reference_proteome-taxonomy +> 2023-12-15T20:58:43 uniprot_reference_proteome-taxonomy ### Update TSV for wikipathways-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/wikipathways-chebi.tsv is newer than config/wikipathways-chebi/config.yaml # File output/tsv/wikipathways-chebi.tsv has no timestamp file -# File output/tsv/wikipathways-chebi.tsv is created 11.287615687370845 days ago (will be updated when >5 days) +# File output/tsv/wikipathways-chebi.tsv is created 7.002037400831227 days ago (will be updated when >5 days) ## Update config/wikipathways-chebi/config.yaml => output/tsv/wikipathways-chebi.tsv -< 2023-12-08T20:55:44 wikipathways-chebi +< 2023-12-15T20:58:43 wikipathways-chebi togoid-config config/wikipathways-chebi update # Success: output/tsv/wikipathways-chebi.tsv is updated -> 2023-12-08T20:55:47 wikipathways-chebi +> 2023-12-15T20:58:46 wikipathways-chebi ### Update TSV for wikipathways-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/wikipathways-doid.tsv is newer than config/wikipathways-doid/config.yaml # File output/tsv/wikipathways-doid.tsv has no timestamp file -# File output/tsv/wikipathways-doid.tsv is created 11.287627659890127 days ago (will be updated when >5 days) +# File output/tsv/wikipathways-doid.tsv is created 7.002050248661076 days ago (will be updated when >5 days) ## Update config/wikipathways-doid/config.yaml => output/tsv/wikipathways-doid.tsv -< 2023-12-08T20:55:47 wikipathways-doid +< 2023-12-15T20:58:46 wikipathways-doid togoid-config config/wikipathways-doid update # Success: output/tsv/wikipathways-doid.tsv is updated -> 2023-12-08T20:55:49 wikipathways-doid +> 2023-12-15T20:58:48 wikipathways-doid ### Update TSV for wikipathways-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/wikipathways-hmdb.tsv is newer than config/wikipathways-hmdb/config.yaml # File output/tsv/wikipathways-hmdb.tsv has no timestamp file -# File output/tsv/wikipathways-hmdb.tsv is created 11.287621428223067 days ago (will be updated when >5 days) +# File output/tsv/wikipathways-hmdb.tsv is created 7.0020444354935885 days ago (will be updated when >5 days) ## Update config/wikipathways-hmdb/config.yaml => output/tsv/wikipathways-hmdb.tsv -< 2023-12-08T20:55:49 wikipathways-hmdb +< 2023-12-15T20:58:48 wikipathways-hmdb togoid-config config/wikipathways-hmdb update # Success: output/tsv/wikipathways-hmdb.tsv is updated -> 2023-12-08T20:55:51 wikipathways-hmdb +> 2023-12-15T20:58:50 wikipathways-hmdb ### Update TSV for wikipathways-lipidmaps if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/wikipathways-lipidmaps.tsv is newer than config/wikipathways-lipidmaps/config.yaml # File output/tsv/wikipathways-lipidmaps.tsv has no timestamp file -# File output/tsv/wikipathways-lipidmaps.tsv is created 11.287625885159317 days ago (will be updated when >5 days) +# File output/tsv/wikipathways-lipidmaps.tsv is created 7.002047583147986 days ago (will be updated when >5 days) ## Update config/wikipathways-lipidmaps/config.yaml => output/tsv/wikipathways-lipidmaps.tsv -< 2023-12-08T20:55:51 wikipathways-lipidmaps +< 2023-12-15T20:58:50 wikipathways-lipidmaps togoid-config config/wikipathways-lipidmaps update # Success: output/tsv/wikipathways-lipidmaps.tsv is updated -> 2023-12-08T20:55:53 wikipathways-lipidmaps +> 2023-12-15T20:58:52 wikipathways-lipidmaps ### Update TSV for wikipathways-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/wikipathways-ncbigene.tsv is newer than config/wikipathways-ncbigene/config.yaml # File output/tsv/wikipathways-ncbigene.tsv has no timestamp file -# File output/tsv/wikipathways-ncbigene.tsv is created 11.287595542511506 days ago (will be updated when >5 days) +# File output/tsv/wikipathways-ncbigene.tsv is created 7.002017457439827 days ago (will be updated when >5 days) ## Update config/wikipathways-ncbigene/config.yaml => output/tsv/wikipathways-ncbigene.tsv -< 2023-12-08T20:55:53 wikipathways-ncbigene +< 2023-12-15T20:58:52 wikipathways-ncbigene togoid-config config/wikipathways-ncbigene update # Success: output/tsv/wikipathways-ncbigene.tsv is updated -> 2023-12-08T20:55:57 wikipathways-ncbigene +> 2023-12-15T20:58:56 wikipathways-ncbigene ### Update TSV for wikipathways-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/wikipathways-uniprot.tsv is newer than config/wikipathways-uniprot/config.yaml # File output/tsv/wikipathways-uniprot.tsv has no timestamp file -# File output/tsv/wikipathways-uniprot.tsv is created 11.28759503946198 days ago (will be updated when >5 days) +# File output/tsv/wikipathways-uniprot.tsv is created 7.002015128802442 days ago (will be updated when >5 days) ## Update config/wikipathways-uniprot/config.yaml => output/tsv/wikipathways-uniprot.tsv -< 2023-12-08T20:55:57 wikipathways-uniprot +< 2023-12-15T20:58:56 wikipathways-uniprot togoid-config config/wikipathways-uniprot update # Success: output/tsv/wikipathways-uniprot.tsv is updated -> 2023-12-08T20:56:02 wikipathways-uniprot +> 2023-12-15T20:59:01 wikipathways-uniprot Rule for TSV (output/tsv/bioproject-biosample.tsv) ------------------------------ Investigating output/tsv/bioproject-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 17:49:56 +0900 +timestamp: 2023-12-15 17:51:01 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:bioproject (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:bioproject (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/bioproject-geo_series.tsv) @@ -2176,12 +2164,12 @@ Rule for TSV (output/tsv/bioproject-geo_series.tsv) Investigating output/tsv/bioproject-geo_series.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 17:49:58 +0900 +timestamp: 2023-12-15 17:51:02 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:bioproject (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:bioproject (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/bioproject-pubmed.tsv) @@ -2189,12 +2177,12 @@ Rule for TSV (output/tsv/bioproject-pubmed.tsv) Investigating output/tsv/bioproject-pubmed.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 17:49:59 +0900 +timestamp: 2023-12-15 17:51:03 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:bioproject (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:bioproject (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/bioproject_umbrella-bioproject.tsv) @@ -2202,12 +2190,12 @@ Rule for TSV (output/tsv/bioproject_umbrella-bioproject.tsv) Investigating output/tsv/bioproject_umbrella-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 17:49:59 +0900 +timestamp: 2023-12-15 17:51:04 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:bioproject (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:bioproject (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/cellosaurus-ncit_disease.tsv) @@ -2219,8 +2207,8 @@ timestamp: 2023-10-06 17:40:53 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:cellosaurus (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:cellosaurus (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/cellosaurus-orphanet_phenotype.tsv) @@ -2232,8 +2220,8 @@ timestamp: 2023-10-06 17:40:56 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:cellosaurus (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:cellosaurus (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/chembl_target-ensembl_gene.tsv) @@ -2257,8 +2245,8 @@ timestamp: 2023-07-28 17:55:29 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:cog (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:cog (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/cog-refseq_protein.tsv) @@ -2270,8 +2258,8 @@ timestamp: 2023-07-28 17:55:40 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:cog (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:cog (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-affy_probeset.tsv) @@ -2279,12 +2267,12 @@ Rule for TSV (output/tsv/ensembl_gene-affy_probeset.tsv) Investigating output/tsv/ensembl_gene-affy_probeset.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:07:13 +0900 +timestamp: 2023-12-15 18:08:34 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-ensembl_protein.tsv) @@ -2292,12 +2280,12 @@ Rule for TSV (output/tsv/ensembl_gene-ensembl_protein.tsv) Investigating output/tsv/ensembl_gene-ensembl_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:09:10 +0900 +timestamp: 2023-12-15 18:10:34 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-ensembl_transcript.tsv) @@ -2305,12 +2293,12 @@ Rule for TSV (output/tsv/ensembl_gene-ensembl_transcript.tsv) Investigating output/tsv/ensembl_gene-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:11:15 +0900 +timestamp: 2023-12-15 18:13:04 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-hgnc.tsv) @@ -2318,12 +2306,12 @@ Rule for TSV (output/tsv/ensembl_gene-hgnc.tsv) Investigating output/tsv/ensembl_gene-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:11:15 +0900 +timestamp: 2023-12-15 18:13:04 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-ncbigene.tsv) @@ -2331,12 +2319,12 @@ Rule for TSV (output/tsv/ensembl_gene-ncbigene.tsv) Investigating output/tsv/ensembl_gene-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:12:42 +0900 +timestamp: 2023-12-15 18:14:28 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-uniprot.tsv) @@ -2344,12 +2332,12 @@ Rule for TSV (output/tsv/ensembl_gene-uniprot.tsv) Investigating output/tsv/ensembl_gene-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:14:04 +0900 +timestamp: 2023-12-15 18:15:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_protein-ensembl_transcript.tsv) @@ -2357,12 +2345,12 @@ Rule for TSV (output/tsv/ensembl_protein-ensembl_transcript.tsv) Investigating output/tsv/ensembl_protein-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:15:56 +0900 +timestamp: 2023-12-15 18:17:40 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-affy_probeset.tsv) @@ -2370,12 +2358,12 @@ Rule for TSV (output/tsv/ensembl_transcript-affy_probeset.tsv) Investigating output/tsv/ensembl_transcript-affy_probeset.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:16:34 +0900 +timestamp: 2023-12-15 18:18:47 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-go.tsv) @@ -2383,12 +2371,12 @@ Rule for TSV (output/tsv/ensembl_transcript-go.tsv) Investigating output/tsv/ensembl_transcript-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:20:30 +0900 +timestamp: 2023-12-15 18:22:41 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-hgnc.tsv) @@ -2396,12 +2384,12 @@ Rule for TSV (output/tsv/ensembl_transcript-hgnc.tsv) Investigating output/tsv/ensembl_transcript-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:20:30 +0900 +timestamp: 2023-12-15 18:22:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-refseq_rna.tsv) @@ -2409,12 +2397,12 @@ Rule for TSV (output/tsv/ensembl_transcript-refseq_rna.tsv) Investigating output/tsv/ensembl_transcript-refseq_rna.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 18:22:08 +0900 +timestamp: 2023-12-15 18:24:17 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ensembl (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ensembl (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/hmdb-chebi.tsv) @@ -2426,8 +2414,8 @@ timestamp: 2023-07-03 13:03:28 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:hmdb (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:hmdb (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/hmdb-inchi_key.tsv) @@ -2439,8 +2427,8 @@ timestamp: 2023-07-03 13:03:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:hmdb (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:hmdb (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/hmdb-pdb_ccd.tsv) @@ -2452,8 +2440,8 @@ timestamp: 2023-07-03 13:06:37 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:hmdb (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:hmdb (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/hmdb-pubchem_compound.tsv) @@ -2465,8 +2453,8 @@ timestamp: 2023-07-03 13:06:27 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:hmdb (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:hmdb (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/homologene-ncbigene.tsv) @@ -2478,8 +2466,8 @@ timestamp: 2023-06-02 19:58:16 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:homologene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:homologene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/hp_phenotype-omim_phenotype.tsv) @@ -2491,8 +2479,8 @@ timestamp: 2023-10-16 09:24:24 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:hp_phenotype (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:hp_phenotype (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/hp_phenotype-orphanet_phenotype.tsv) @@ -2504,8 +2492,8 @@ timestamp: 2023-10-13 18:16:38 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:hp_phenotype (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:hp_phenotype (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-go.tsv) @@ -2517,8 +2505,8 @@ timestamp: 2023-11-12 10:20:00 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-pdb.tsv) @@ -2530,8 +2518,8 @@ timestamp: 2023-11-12 10:20:03 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-pfam.tsv) @@ -2543,8 +2531,8 @@ timestamp: 2023-11-12 10:20:04 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-prosite.tsv) @@ -2556,8 +2544,8 @@ timestamp: 2023-11-12 10:20:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-pubmed.tsv) @@ -2569,8 +2557,8 @@ timestamp: 2023-11-12 10:20:08 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-reactome_pathway.tsv) @@ -2582,8 +2570,8 @@ timestamp: 2023-11-12 10:20:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-smart.tsv) @@ -2595,8 +2583,8 @@ timestamp: 2023-11-12 10:20:11 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/interpro-uniprot.tsv) @@ -2608,8 +2596,8 @@ timestamp: 2023-11-12 14:10:18 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:interpro (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:interpro (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_gene-ensembl_gene.tsv) @@ -2617,12 +2605,12 @@ Rule for TSV (output/tsv/mgi_gene-ensembl_gene.tsv) Investigating output/tsv/mgi_gene-ensembl_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:14 +0900 +timestamp: 2023-12-15 19:06:29 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_gene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_gene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_gene-hgnc.tsv) @@ -2630,12 +2618,12 @@ Rule for TSV (output/tsv/mgi_gene-hgnc.tsv) Investigating output/tsv/mgi_gene-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:15 +0900 +timestamp: 2023-12-15 19:06:29 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_gene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_gene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_gene-mgi_allele.tsv) @@ -2643,12 +2631,12 @@ Rule for TSV (output/tsv/mgi_gene-mgi_allele.tsv) Investigating output/tsv/mgi_gene-mgi_allele.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:16 +0900 +timestamp: 2023-12-15 19:06:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_gene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_gene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_gene-ncbigene.tsv) @@ -2656,12 +2644,12 @@ Rule for TSV (output/tsv/mgi_gene-ncbigene.tsv) Investigating output/tsv/mgi_gene-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:17 +0900 +timestamp: 2023-12-15 19:06:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_gene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_gene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_gene-uniprot.tsv) @@ -2669,12 +2657,12 @@ Rule for TSV (output/tsv/mgi_gene-uniprot.tsv) Investigating output/tsv/mgi_gene-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:17 +0900 +timestamp: 2023-12-15 19:06:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_gene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_gene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_genotype-doid.tsv) @@ -2682,12 +2670,12 @@ Rule for TSV (output/tsv/mgi_genotype-doid.tsv) Investigating output/tsv/mgi_genotype-doid.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:20 +0900 +timestamp: 2023-12-15 19:06:35 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_genotype (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_genotype (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_genotype-mgi_allele.tsv) @@ -2695,12 +2683,12 @@ Rule for TSV (output/tsv/mgi_genotype-mgi_allele.tsv) Investigating output/tsv/mgi_genotype-mgi_allele.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:22 +0900 +timestamp: 2023-12-15 19:06:36 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_genotype (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_genotype (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/mgi_genotype-mp.tsv) @@ -2708,12 +2696,12 @@ Rule for TSV (output/tsv/mgi_genotype-mp.tsv) Investigating output/tsv/mgi_genotype-mp.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:24 +0900 +timestamp: 2023-12-15 19:06:38 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:mgi_genotype (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:mgi_genotype (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-ensembl_gene.tsv) @@ -2721,12 +2709,12 @@ Rule for TSV (output/tsv/ncbigene-ensembl_gene.tsv) Investigating output/tsv/ncbigene-ensembl_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:04:56 +0900 +timestamp: 2023-12-15 19:07:09 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-ensembl_protein.tsv) @@ -2734,12 +2722,12 @@ Rule for TSV (output/tsv/ncbigene-ensembl_protein.tsv) Investigating output/tsv/ncbigene-ensembl_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:05:54 +0900 +timestamp: 2023-12-15 19:08:03 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-ensembl_transcript.tsv) @@ -2747,12 +2735,12 @@ Rule for TSV (output/tsv/ncbigene-ensembl_transcript.tsv) Investigating output/tsv/ncbigene-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:06:43 +0900 +timestamp: 2023-12-15 19:08:59 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-flybase_gene.tsv) @@ -2760,12 +2748,12 @@ Rule for TSV (output/tsv/ncbigene-flybase_gene.tsv) Investigating output/tsv/ncbigene-flybase_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:07:56 +0900 +timestamp: 2023-12-15 19:10:15 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-go.tsv) @@ -2773,12 +2761,12 @@ Rule for TSV (output/tsv/ncbigene-go.tsv) Investigating output/tsv/ncbigene-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:10:51 +0900 +timestamp: 2023-12-15 19:13:29 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-hgnc.tsv) @@ -2786,12 +2774,12 @@ Rule for TSV (output/tsv/ncbigene-hgnc.tsv) Investigating output/tsv/ncbigene-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:10:52 +0900 +timestamp: 2023-12-15 19:13:29 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-mgi_gene.tsv) @@ -2799,12 +2787,12 @@ Rule for TSV (output/tsv/ncbigene-mgi_gene.tsv) Investigating output/tsv/ncbigene-mgi_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:11:47 +0900 +timestamp: 2023-12-15 19:14:25 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-mirbase.tsv) @@ -2812,12 +2800,12 @@ Rule for TSV (output/tsv/ncbigene-mirbase.tsv) Investigating output/tsv/ncbigene-mirbase.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:13:21 +0900 +timestamp: 2023-12-15 19:15:58 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-omim_gene.tsv) @@ -2825,12 +2813,12 @@ Rule for TSV (output/tsv/ncbigene-omim_gene.tsv) Investigating output/tsv/ncbigene-omim_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:13:22 +0900 +timestamp: 2023-12-15 19:15:59 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-refseq_genomic.tsv) @@ -2838,12 +2826,12 @@ Rule for TSV (output/tsv/ncbigene-refseq_genomic.tsv) Investigating output/tsv/ncbigene-refseq_genomic.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:17:09 +0900 +timestamp: 2023-12-15 19:19:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-refseq_protein.tsv) @@ -2851,12 +2839,12 @@ Rule for TSV (output/tsv/ncbigene-refseq_protein.tsv) Investigating output/tsv/ncbigene-refseq_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:21:19 +0900 +timestamp: 2023-12-15 19:23:59 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-refseq_rna.tsv) @@ -2864,12 +2852,12 @@ Rule for TSV (output/tsv/ncbigene-refseq_rna.tsv) Investigating output/tsv/ncbigene-refseq_rna.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:25:00 +0900 +timestamp: 2023-12-15 19:27:37 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-rgd.tsv) @@ -2877,12 +2865,12 @@ Rule for TSV (output/tsv/ncbigene-rgd.tsv) Investigating output/tsv/ncbigene-rgd.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:25:56 +0900 +timestamp: 2023-12-15 19:28:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-sgd.tsv) @@ -2890,12 +2878,12 @@ Rule for TSV (output/tsv/ncbigene-sgd.tsv) Investigating output/tsv/ncbigene-sgd.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:27:00 +0900 +timestamp: 2023-12-15 19:29:37 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-tair.tsv) @@ -2903,12 +2891,12 @@ Rule for TSV (output/tsv/ncbigene-tair.tsv) Investigating output/tsv/ncbigene-tair.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:28:04 +0900 +timestamp: 2023-12-15 19:30:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-taxonomy.tsv) @@ -2916,12 +2904,12 @@ Rule for TSV (output/tsv/ncbigene-taxonomy.tsv) Investigating output/tsv/ncbigene-taxonomy.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:28:46 +0900 +timestamp: 2023-12-15 19:31:28 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-vgnc.tsv) @@ -2929,12 +2917,12 @@ Rule for TSV (output/tsv/ncbigene-vgnc.tsv) Investigating output/tsv/ncbigene-vgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:29:51 +0900 +timestamp: 2023-12-15 19:32:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-wormbase_gene.tsv) @@ -2942,12 +2930,12 @@ Rule for TSV (output/tsv/ncbigene-wormbase_gene.tsv) Investigating output/tsv/ncbigene-wormbase_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:30:55 +0900 +timestamp: 2023-12-15 19:33:37 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-xenbase_gene.tsv) @@ -2955,12 +2943,12 @@ Rule for TSV (output/tsv/ncbigene-xenbase_gene.tsv) Investigating output/tsv/ncbigene-xenbase_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:31:59 +0900 +timestamp: 2023-12-15 19:34:41 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/ncbigene-zfin_gene.tsv) @@ -2968,12 +2956,12 @@ Rule for TSV (output/tsv/ncbigene-zfin_gene.tsv) Investigating output/tsv/ncbigene-zfin_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:33:03 +0900 +timestamp: 2023-12-15 19:35:46 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:ncbigene (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:ncbigene (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/oma_protein-ensembl_gene.tsv) @@ -2985,8 +2973,8 @@ timestamp: 2023-10-13 19:34:15 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:oma_protein (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:oma_protein (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/oma_protein-ensembl_transcript.tsv) @@ -2998,8 +2986,8 @@ timestamp: 2023-10-13 19:43:07 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:oma_protein (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:oma_protein (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/oma_protein-ncbigene.tsv) @@ -3011,8 +2999,8 @@ timestamp: 2023-10-20 20:12:58 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:oma_protein (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:oma_protein (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/oma_protein-uniprot.tsv) @@ -3024,8 +3012,8 @@ timestamp: 2023-10-13 19:43:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:oma_protein (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:oma_protein (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/prosite-prosite_prorule.tsv) @@ -3037,8 +3025,8 @@ timestamp: 2023-11-18 02:00:53 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:prosite (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:prosite (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/pubchem_compound-atc.tsv) @@ -3058,12 +3046,12 @@ Rule for TSV (output/tsv/reactome_pathway-chebi.tsv) Investigating output/tsv/reactome_pathway-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:24 +0900 +timestamp: 2023-12-15 19:44:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_pathway-go.tsv) @@ -3071,12 +3059,12 @@ Rule for TSV (output/tsv/reactome_pathway-go.tsv) Investigating output/tsv/reactome_pathway-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:25 +0900 +timestamp: 2023-12-15 19:44:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_pathway-iuphar_ligand.tsv) @@ -3084,12 +3072,12 @@ Rule for TSV (output/tsv/reactome_pathway-iuphar_ligand.tsv) Investigating output/tsv/reactome_pathway-iuphar_ligand.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:25 +0900 +timestamp: 2023-12-15 19:44:45 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_pathway-mirbase.tsv) @@ -3097,12 +3085,12 @@ Rule for TSV (output/tsv/reactome_pathway-mirbase.tsv) Investigating output/tsv/reactome_pathway-mirbase.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:25 +0900 +timestamp: 2023-12-15 19:44:45 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_pathway-reactome_reaction.tsv) @@ -3110,12 +3098,12 @@ Rule for TSV (output/tsv/reactome_pathway-reactome_reaction.tsv) Investigating output/tsv/reactome_pathway-reactome_reaction.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:27 +0900 +timestamp: 2023-12-15 19:44:46 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_pathway-uniprot.tsv) @@ -3123,12 +3111,12 @@ Rule for TSV (output/tsv/reactome_pathway-uniprot.tsv) Investigating output/tsv/reactome_pathway-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:28 +0900 +timestamp: 2023-12-15 19:44:48 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_reaction-chebi.tsv) @@ -3136,12 +3124,12 @@ Rule for TSV (output/tsv/reactome_reaction-chebi.tsv) Investigating output/tsv/reactome_reaction-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:29 +0900 +timestamp: 2023-12-15 19:44:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_reaction-go.tsv) @@ -3149,12 +3137,12 @@ Rule for TSV (output/tsv/reactome_reaction-go.tsv) Investigating output/tsv/reactome_reaction-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:29 +0900 +timestamp: 2023-12-15 19:44:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_reaction-iuphar_ligand.tsv) @@ -3162,12 +3150,12 @@ Rule for TSV (output/tsv/reactome_reaction-iuphar_ligand.tsv) Investigating output/tsv/reactome_reaction-iuphar_ligand.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:29 +0900 +timestamp: 2023-12-15 19:44:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_reaction-mirbase.tsv) @@ -3175,12 +3163,12 @@ Rule for TSV (output/tsv/reactome_reaction-mirbase.tsv) Investigating output/tsv/reactome_reaction-mirbase.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:29 +0900 +timestamp: 2023-12-15 19:44:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/reactome_reaction-uniprot.tsv) @@ -3188,12 +3176,12 @@ Rule for TSV (output/tsv/reactome_reaction-uniprot.tsv) Investigating output/tsv/reactome_reaction-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:40:30 +0900 +timestamp: 2023-12-15 19:44:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:reactome (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:reactome (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_protein-uniprot.tsv) @@ -3201,12 +3189,12 @@ Rule for TSV (output/tsv/refseq_protein-uniprot.tsv) Investigating output/tsv/refseq_protein-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:48:21 +0900 +timestamp: 2023-12-15 19:51:18 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_protein (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_protein (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_rna-dbsnp.tsv) @@ -3218,8 +3206,8 @@ timestamp: 2023-11-18 02:36:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_rna (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_rna (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_rna-hgnc.tsv) @@ -3231,8 +3219,8 @@ timestamp: 2023-11-18 02:37:34 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_rna (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_rna (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_rna-ncbigene.tsv) @@ -3244,8 +3232,8 @@ timestamp: 2023-11-18 02:40:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_rna (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_rna (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_rna-omim_gene.tsv) @@ -3257,8 +3245,8 @@ timestamp: 2023-11-18 02:42:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_rna (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_rna (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_rna-pubmed.tsv) @@ -3270,8 +3258,8 @@ timestamp: 2023-11-18 02:43:55 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_rna (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_rna (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_rna-refseq_protein.tsv) @@ -3283,8 +3271,8 @@ timestamp: 2023-11-18 02:47:16 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_rna (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_rna (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/refseq_rna-taxonomy.tsv) @@ -3296,8 +3284,8 @@ timestamp: 2023-11-18 02:50:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:refseq_rna (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:refseq_rna (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/rhea-chebi.tsv) @@ -3309,8 +3297,8 @@ timestamp: 2023-11-12 15:31:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:rhea (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:rhea (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/rhea-ec.tsv) @@ -3322,8 +3310,8 @@ timestamp: 2023-11-12 15:31:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:rhea (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:rhea (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/rhea-go.tsv) @@ -3335,8 +3323,8 @@ timestamp: 2023-11-12 15:31:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:rhea (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:rhea (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/rhea-pubmed.tsv) @@ -3348,8 +3336,8 @@ timestamp: 2023-11-12 15:31:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:rhea (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:rhea (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/rhea-reactome_reaction.tsv) @@ -3361,8 +3349,8 @@ timestamp: 2023-11-12 15:31:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:rhea (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:rhea (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/rhea-uniprot.tsv) @@ -3374,8 +3362,8 @@ timestamp: 2023-11-12 15:32:36 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:rhea (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:rhea (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_accession-bioproject.tsv) @@ -3383,12 +3371,12 @@ Rule for TSV (output/tsv/sra_accession-bioproject.tsv) Investigating output/tsv/sra_accession-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:49:48 +0900 +timestamp: 2023-12-15 19:53:02 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_accession-biosample.tsv) @@ -3396,12 +3384,12 @@ Rule for TSV (output/tsv/sra_accession-biosample.tsv) Investigating output/tsv/sra_accession-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:56:29 +0900 +timestamp: 2023-12-15 19:59:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_accession-sra_analysis.tsv) @@ -3409,12 +3397,12 @@ Rule for TSV (output/tsv/sra_accession-sra_analysis.tsv) Investigating output/tsv/sra_accession-sra_analysis.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 19:57:27 +0900 +timestamp: 2023-12-15 20:00:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_accession-sra_experiment.tsv) @@ -3422,12 +3410,12 @@ Rule for TSV (output/tsv/sra_accession-sra_experiment.tsv) Investigating output/tsv/sra_accession-sra_experiment.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:03:24 +0900 +timestamp: 2023-12-15 20:06:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_accession-sra_project.tsv) @@ -3435,12 +3423,12 @@ Rule for TSV (output/tsv/sra_accession-sra_project.tsv) Investigating output/tsv/sra_accession-sra_project.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:04:23 +0900 +timestamp: 2023-12-15 20:07:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_accession-sra_run.tsv) @@ -3448,12 +3436,12 @@ Rule for TSV (output/tsv/sra_accession-sra_run.tsv) Investigating output/tsv/sra_accession-sra_run.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:11:08 +0900 +timestamp: 2023-12-15 20:14:27 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_accession-sra_sample.tsv) @@ -3461,12 +3449,12 @@ Rule for TSV (output/tsv/sra_accession-sra_sample.tsv) Investigating output/tsv/sra_accession-sra_sample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:17:01 +0900 +timestamp: 2023-12-15 20:20:15 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_experiment-bioproject.tsv) @@ -3474,12 +3462,12 @@ Rule for TSV (output/tsv/sra_experiment-bioproject.tsv) Investigating output/tsv/sra_experiment-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:20:17 +0900 +timestamp: 2023-12-15 20:23:37 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_experiment-biosample.tsv) @@ -3487,12 +3475,12 @@ Rule for TSV (output/tsv/sra_experiment-biosample.tsv) Investigating output/tsv/sra_experiment-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:23:32 +0900 +timestamp: 2023-12-15 20:26:38 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_experiment-sra_project.tsv) @@ -3500,12 +3488,12 @@ Rule for TSV (output/tsv/sra_experiment-sra_project.tsv) Investigating output/tsv/sra_experiment-sra_project.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:26:17 +0900 +timestamp: 2023-12-15 20:29:12 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_experiment-sra_sample.tsv) @@ -3513,12 +3501,12 @@ Rule for TSV (output/tsv/sra_experiment-sra_sample.tsv) Investigating output/tsv/sra_experiment-sra_sample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:29:01 +0900 +timestamp: 2023-12-15 20:31:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_project-bioproject.tsv) @@ -3526,12 +3514,12 @@ Rule for TSV (output/tsv/sra_project-bioproject.tsv) Investigating output/tsv/sra_project-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:30:01 +0900 +timestamp: 2023-12-15 20:32:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_run-bioproject.tsv) @@ -3539,12 +3527,12 @@ Rule for TSV (output/tsv/sra_run-bioproject.tsv) Investigating output/tsv/sra_run-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:33:39 +0900 +timestamp: 2023-12-15 20:36:28 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_run-biosample.tsv) @@ -3552,12 +3540,12 @@ Rule for TSV (output/tsv/sra_run-biosample.tsv) Investigating output/tsv/sra_run-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:37:03 +0900 +timestamp: 2023-12-15 20:39:58 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_run-sra_experiment.tsv) @@ -3565,12 +3553,12 @@ Rule for TSV (output/tsv/sra_run-sra_experiment.tsv) Investigating output/tsv/sra_run-sra_experiment.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:39:39 +0900 +timestamp: 2023-12-15 20:42:50 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_run-sra_project.tsv) @@ -3578,12 +3566,12 @@ Rule for TSV (output/tsv/sra_run-sra_project.tsv) Investigating output/tsv/sra_run-sra_project.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:42:42 +0900 +timestamp: 2023-12-15 20:45:38 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_run-sra_sample.tsv) @@ -3591,12 +3579,12 @@ Rule for TSV (output/tsv/sra_run-sra_sample.tsv) Investigating output/tsv/sra_run-sra_sample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:45:24 +0900 +timestamp: 2023-12-15 20:48:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/sra_sample-biosample.tsv) @@ -3604,12 +3592,12 @@ Rule for TSV (output/tsv/sra_sample-biosample.tsv) Investigating output/tsv/sra_sample-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:48:20 +0900 +timestamp: 2023-12-15 20:51:33 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:sra (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:sra (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/swisslipids-chebi.tsv) @@ -3617,12 +3605,12 @@ Rule for TSV (output/tsv/swisslipids-chebi.tsv) Investigating output/tsv/swisslipids-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:48:35 +0900 +timestamp: 2023-12-15 20:51:47 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:swisslipids (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:swisslipids (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/swisslipids-hmdb.tsv) @@ -3630,12 +3618,12 @@ Rule for TSV (output/tsv/swisslipids-hmdb.tsv) Investigating output/tsv/swisslipids-hmdb.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:48:48 +0900 +timestamp: 2023-12-15 20:52:01 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:swisslipids (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:swisslipids (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/swisslipids-inchi_key.tsv) @@ -3643,12 +3631,12 @@ Rule for TSV (output/tsv/swisslipids-inchi_key.tsv) Investigating output/tsv/swisslipids-inchi_key.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:49:01 +0900 +timestamp: 2023-12-15 20:52:13 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:swisslipids (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:swisslipids (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/taxonomy-pubmed.tsv) @@ -3656,12 +3644,12 @@ Rule for TSV (output/tsv/taxonomy-pubmed.tsv) Investigating output/tsv/taxonomy-pubmed.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:49:01 +0900 +timestamp: 2023-12-15 20:52:14 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:taxonomy (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:taxonomy (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/togovar-clinvar.tsv) @@ -3685,8 +3673,8 @@ timestamp: 2023-11-12 17:18:25 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-dbsnp.tsv) @@ -3698,8 +3686,8 @@ timestamp: 2023-11-12 17:18:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-ec.tsv) @@ -3711,8 +3699,8 @@ timestamp: 2023-11-12 17:48:56 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-ensembl_gene.tsv) @@ -3724,8 +3712,8 @@ timestamp: 2023-11-12 18:39:02 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-ensembl_protein.tsv) @@ -3737,8 +3725,8 @@ timestamp: 2023-11-12 19:28:13 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-ensembl_transcript.tsv) @@ -3750,8 +3738,8 @@ timestamp: 2023-11-12 20:17:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-go.tsv) @@ -3763,8 +3751,8 @@ timestamp: 2023-11-12 20:33:52 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-hgnc.tsv) @@ -3776,8 +3764,8 @@ timestamp: 2023-11-12 21:14:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-insdc.tsv) @@ -3789,8 +3777,8 @@ timestamp: 2023-11-12 22:03:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-intact.tsv) @@ -3802,8 +3790,8 @@ timestamp: 2023-11-12 22:04:53 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-ncbigene.tsv) @@ -3815,8 +3803,8 @@ timestamp: 2023-11-12 22:46:30 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-oma_group.tsv) @@ -3828,8 +3816,8 @@ timestamp: 2023-11-12 23:28:27 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-omim_gene.tsv) @@ -3841,8 +3829,8 @@ timestamp: 2023-11-12 23:28:33 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-omim_phenotype.tsv) @@ -3854,8 +3842,8 @@ timestamp: 2023-11-12 23:28:36 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-orphanet_phenotype.tsv) @@ -3867,8 +3855,8 @@ timestamp: 2023-11-13 00:17:48 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-pdb.tsv) @@ -3880,8 +3868,8 @@ timestamp: 2023-11-13 00:59:24 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-reactome_pathway.tsv) @@ -3893,8 +3881,8 @@ timestamp: 2023-11-13 01:48:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-refseq_protein.tsv) @@ -3906,8 +3894,8 @@ timestamp: 2023-11-13 02:32:17 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot-uniprot_mnemonic.tsv) @@ -3919,8 +3907,8 @@ timestamp: 2023-11-13 03:29:18 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_insdc.tsv) @@ -3928,12 +3916,12 @@ Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_insdc.tsv) Investigating output/tsv/uniprot_reference_proteome-assembly_insdc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:55:43 +0900 +timestamp: 2023-12-15 20:58:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_refseq.tsv) @@ -3941,12 +3929,12 @@ Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_refseq.tsv) Investigating output/tsv/uniprot_reference_proteome-assembly_refseq.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:55:43 +0900 +timestamp: 2023-12-15 20:58:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ Rule for TSV (output/tsv/uniprot_reference_proteome-taxonomy.tsv) @@ -3954,68 +3942,68 @@ Rule for TSV (output/tsv/uniprot_reference_proteome-taxonomy.tsv) Investigating output/tsv/uniprot_reference_proteome-taxonomy.tsv class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:55:44 +0900 +timestamp: 2023-12-15 20:58:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---prepare:uniprot (2023-12-08 20:56:02 +0900) -latest-prerequisite time: 2023-12-08 20:56:02 +0900 +--prepare:uniprot (2023-12-15 20:59:01 +0900) +latest-prerequisite time: 2023-12-15 20:59:01 +0900 ................................ ### Update TTL for affy_probeset-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/affy_probeset-ncbigene.ttl is older than output/tsv/affy_probeset-ncbigene.tsv ## Convert output/tsv/affy_probeset-ncbigene.tsv => output/ttl/affy_probeset-ncbigene.ttl -< 2023-12-08T20:56:02 affy_probeset-ncbigene +< 2023-12-15T20:59:01 affy_probeset-ncbigene togoid-config config/affy_probeset-ncbigene convert -> 2023-12-08T20:56:02 affy_probeset-ncbigene +> 2023-12-15T20:59:01 affy_probeset-ncbigene ### Update TTL for assembly_insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/assembly_insdc-bioproject.ttl is older than output/tsv/assembly_insdc-bioproject.tsv ## Convert output/tsv/assembly_insdc-bioproject.tsv => output/ttl/assembly_insdc-bioproject.ttl -< 2023-12-08T20:56:02 assembly_insdc-bioproject +< 2023-12-15T20:59:01 assembly_insdc-bioproject togoid-config config/assembly_insdc-bioproject convert -> 2023-12-08T20:56:19 assembly_insdc-bioproject +> 2023-12-15T20:59:17 assembly_insdc-bioproject ### Update TTL for assembly_insdc-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/assembly_insdc-biosample.ttl is older than output/tsv/assembly_insdc-biosample.tsv ## Convert output/tsv/assembly_insdc-biosample.tsv => output/ttl/assembly_insdc-biosample.ttl -< 2023-12-08T20:56:19 assembly_insdc-biosample +< 2023-12-15T20:59:17 assembly_insdc-biosample togoid-config config/assembly_insdc-biosample convert -> 2023-12-08T20:56:36 assembly_insdc-biosample +> 2023-12-15T20:59:33 assembly_insdc-biosample ### Update TTL for assembly_insdc-insdc_master if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/assembly_insdc-insdc_master.ttl is older than output/tsv/assembly_insdc-insdc_master.tsv ## Convert output/tsv/assembly_insdc-insdc_master.tsv => output/ttl/assembly_insdc-insdc_master.ttl -< 2023-12-08T20:56:36 assembly_insdc-insdc_master +< 2023-12-15T20:59:33 assembly_insdc-insdc_master togoid-config config/assembly_insdc-insdc_master convert -> 2023-12-08T20:56:51 assembly_insdc-insdc_master +> 2023-12-15T20:59:50 assembly_insdc-insdc_master ### Update TTL for bioproject-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/bioproject-biosample.ttl is older than output/tsv/bioproject-biosample.tsv ## Convert output/tsv/bioproject-biosample.tsv => output/ttl/bioproject-biosample.ttl -< 2023-12-08T20:56:51 bioproject-biosample +< 2023-12-15T20:59:50 bioproject-biosample togoid-config config/bioproject-biosample convert -> 2023-12-08T20:57:11 bioproject-biosample +> 2023-12-15T21:00:09 bioproject-biosample ### Update TTL for bioproject-geo_series if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/bioproject-geo_series.ttl is older than output/tsv/bioproject-geo_series.tsv ## Convert output/tsv/bioproject-geo_series.tsv => output/ttl/bioproject-geo_series.ttl -< 2023-12-08T20:57:11 bioproject-geo_series +< 2023-12-15T21:00:09 bioproject-geo_series togoid-config config/bioproject-geo_series convert -> 2023-12-08T20:57:12 bioproject-geo_series +> 2023-12-15T21:00:11 bioproject-geo_series ### Update TTL for bioproject-pubmed if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/bioproject-pubmed.ttl is older than output/tsv/bioproject-pubmed.tsv ## Convert output/tsv/bioproject-pubmed.tsv => output/ttl/bioproject-pubmed.ttl -< 2023-12-08T20:57:12 bioproject-pubmed +< 2023-12-15T21:00:11 bioproject-pubmed togoid-config config/bioproject-pubmed convert -> 2023-12-08T20:57:14 bioproject-pubmed +> 2023-12-15T21:00:13 bioproject-pubmed ### Update TTL for bioproject_umbrella-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/bioproject_umbrella-bioproject.ttl is older than output/tsv/bioproject_umbrella-bioproject.tsv ## Convert output/tsv/bioproject_umbrella-bioproject.tsv => output/ttl/bioproject_umbrella-bioproject.ttl -< 2023-12-08T20:57:14 bioproject_umbrella-bioproject +< 2023-12-15T21:00:13 bioproject_umbrella-bioproject togoid-config config/bioproject_umbrella-bioproject convert -> 2023-12-08T20:57:16 bioproject_umbrella-bioproject +> 2023-12-15T21:00:14 bioproject_umbrella-bioproject ### Update TTL for biosample-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/biosample-bioproject.ttl is older than output/tsv/biosample-bioproject.tsv ## Convert output/tsv/biosample-bioproject.tsv => output/ttl/biosample-bioproject.ttl -< 2023-12-08T20:57:16 biosample-bioproject +< 2023-12-15T21:00:14 biosample-bioproject togoid-config config/biosample-bioproject convert -> 2023-12-08T20:57:34 biosample-bioproject +> 2023-12-15T21:00:33 biosample-bioproject ### Update TTL for cellosaurus-ncit_disease if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/cellosaurus-ncit_disease.ttl is newer than output/tsv/cellosaurus-ncit_disease.tsv # => Preserving output/ttl/cellosaurus-ncit_disease.ttl @@ -4025,114 +4013,114 @@ togoid-config config/biosample-bioproject convert ### Update TTL for chebi-inchi_key if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chebi-inchi_key.ttl is older than output/tsv/chebi-inchi_key.tsv ## Convert output/tsv/chebi-inchi_key.tsv => output/ttl/chebi-inchi_key.ttl -< 2023-12-08T20:57:34 chebi-inchi_key +< 2023-12-15T21:00:33 chebi-inchi_key togoid-config config/chebi-inchi_key convert -> 2023-12-08T20:57:35 chebi-inchi_key +> 2023-12-15T21:00:35 chebi-inchi_key ### Update TTL for chembl_compound-chebi if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-chebi.ttl is older than output/tsv/chembl_compound-chebi.tsv ## Convert output/tsv/chembl_compound-chebi.tsv => output/ttl/chembl_compound-chebi.ttl -< 2023-12-08T20:57:35 chembl_compound-chebi +< 2023-12-15T21:00:35 chembl_compound-chebi togoid-config config/chembl_compound-chebi convert -> 2023-12-08T20:57:36 chembl_compound-chebi +> 2023-12-15T21:00:35 chembl_compound-chebi ### Update TTL for chembl_compound-chembl_target if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-chembl_target.ttl is older than output/tsv/chembl_compound-chembl_target.tsv ## Convert output/tsv/chembl_compound-chembl_target.tsv => output/ttl/chembl_compound-chembl_target.ttl -< 2023-12-08T20:57:36 chembl_compound-chembl_target +< 2023-12-15T21:00:35 chembl_compound-chembl_target togoid-config config/chembl_compound-chembl_target convert -> 2023-12-08T20:58:03 chembl_compound-chembl_target +> 2023-12-15T21:01:04 chembl_compound-chembl_target ### Update TTL for chembl_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-drugbank.ttl is older than output/tsv/chembl_compound-drugbank.tsv ## Convert output/tsv/chembl_compound-drugbank.tsv => output/ttl/chembl_compound-drugbank.ttl -< 2023-12-08T20:58:03 chembl_compound-drugbank +< 2023-12-15T21:01:04 chembl_compound-drugbank togoid-config config/chembl_compound-drugbank convert -> 2023-12-08T20:58:03 chembl_compound-drugbank +> 2023-12-15T21:01:04 chembl_compound-drugbank ### Update TTL for chembl_compound-hmdb if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-hmdb.ttl is older than output/tsv/chembl_compound-hmdb.tsv ## Convert output/tsv/chembl_compound-hmdb.tsv => output/ttl/chembl_compound-hmdb.ttl -< 2023-12-08T20:58:03 chembl_compound-hmdb +< 2023-12-15T21:01:04 chembl_compound-hmdb togoid-config config/chembl_compound-hmdb convert -> 2023-12-08T20:58:03 chembl_compound-hmdb +> 2023-12-15T21:01:04 chembl_compound-hmdb ### Update TTL for chembl_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-inchi_key.ttl is older than output/tsv/chembl_compound-inchi_key.tsv ## Convert output/tsv/chembl_compound-inchi_key.tsv => output/ttl/chembl_compound-inchi_key.ttl -< 2023-12-08T20:58:03 chembl_compound-inchi_key +< 2023-12-15T21:01:04 chembl_compound-inchi_key togoid-config config/chembl_compound-inchi_key convert -> 2023-12-08T20:58:21 chembl_compound-inchi_key +> 2023-12-15T21:01:22 chembl_compound-inchi_key ### Update TTL for chembl_compound-mesh if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-mesh.ttl is older than output/tsv/chembl_compound-mesh.tsv ## Convert output/tsv/chembl_compound-mesh.tsv => output/ttl/chembl_compound-mesh.ttl -< 2023-12-08T20:58:21 chembl_compound-mesh +< 2023-12-15T21:01:22 chembl_compound-mesh togoid-config config/chembl_compound-mesh convert -> 2023-12-08T20:58:21 chembl_compound-mesh +> 2023-12-15T21:01:23 chembl_compound-mesh ### Update TTL for chembl_compound-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-pdb_ccd.ttl is older than output/tsv/chembl_compound-pdb_ccd.tsv ## Convert output/tsv/chembl_compound-pdb_ccd.tsv => output/ttl/chembl_compound-pdb_ccd.ttl -< 2023-12-08T20:58:21 chembl_compound-pdb_ccd +< 2023-12-15T21:01:23 chembl_compound-pdb_ccd togoid-config config/chembl_compound-pdb_ccd convert -> 2023-12-08T20:58:22 chembl_compound-pdb_ccd +> 2023-12-15T21:01:23 chembl_compound-pdb_ccd ### Update TTL for chembl_compound-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-pubchem_compound.ttl is older than output/tsv/chembl_compound-pubchem_compound.tsv ## Convert output/tsv/chembl_compound-pubchem_compound.tsv => output/ttl/chembl_compound-pubchem_compound.ttl -< 2023-12-08T20:58:22 chembl_compound-pubchem_compound +< 2023-12-15T21:01:23 chembl_compound-pubchem_compound togoid-config config/chembl_compound-pubchem_compound convert -> 2023-12-08T20:58:38 chembl_compound-pubchem_compound +> 2023-12-15T21:01:40 chembl_compound-pubchem_compound ### Update TTL for chembl_compound-pubchem_substance if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-pubchem_substance.ttl is older than output/tsv/chembl_compound-pubchem_substance.tsv ## Convert output/tsv/chembl_compound-pubchem_substance.tsv => output/ttl/chembl_compound-pubchem_substance.ttl -< 2023-12-08T20:58:38 chembl_compound-pubchem_substance +< 2023-12-15T21:01:40 chembl_compound-pubchem_substance togoid-config config/chembl_compound-pubchem_substance convert -> 2023-12-08T20:58:42 chembl_compound-pubchem_substance +> 2023-12-15T21:01:43 chembl_compound-pubchem_substance ### Update TTL for chembl_compound-pubmed if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_compound-pubmed.ttl is older than output/tsv/chembl_compound-pubmed.tsv ## Convert output/tsv/chembl_compound-pubmed.tsv => output/ttl/chembl_compound-pubmed.ttl -< 2023-12-08T20:58:42 chembl_compound-pubmed +< 2023-12-15T21:01:43 chembl_compound-pubmed togoid-config config/chembl_compound-pubmed convert -> 2023-12-08T20:58:53 chembl_compound-pubmed +> 2023-12-15T21:01:55 chembl_compound-pubmed ### Update TTL for chembl_target-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/chembl_target-ensembl_gene.ttl is newer than output/tsv/chembl_target-ensembl_gene.tsv # => Preserving output/ttl/chembl_target-ensembl_gene.ttl ### Update TTL for chembl_target-go if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_target-go.ttl is older than output/tsv/chembl_target-go.tsv ## Convert output/tsv/chembl_target-go.tsv => output/ttl/chembl_target-go.ttl -< 2023-12-08T20:58:53 chembl_target-go +< 2023-12-15T21:01:55 chembl_target-go togoid-config config/chembl_target-go convert -> 2023-12-08T20:58:53 chembl_target-go +> 2023-12-15T21:01:55 chembl_target-go ### Update TTL for chembl_target-interpro if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_target-interpro.ttl is older than output/tsv/chembl_target-interpro.tsv ## Convert output/tsv/chembl_target-interpro.tsv => output/ttl/chembl_target-interpro.ttl -< 2023-12-08T20:58:53 chembl_target-interpro +< 2023-12-15T21:01:55 chembl_target-interpro togoid-config config/chembl_target-interpro convert -> 2023-12-08T20:58:54 chembl_target-interpro +> 2023-12-15T21:01:55 chembl_target-interpro ### Update TTL for chembl_target-pdb if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_target-pdb.ttl is older than output/tsv/chembl_target-pdb.tsv ## Convert output/tsv/chembl_target-pdb.tsv => output/ttl/chembl_target-pdb.ttl -< 2023-12-08T20:58:54 chembl_target-pdb +< 2023-12-15T21:01:55 chembl_target-pdb togoid-config config/chembl_target-pdb convert -> 2023-12-08T20:58:54 chembl_target-pdb +> 2023-12-15T21:01:56 chembl_target-pdb ### Update TTL for chembl_target-pfam if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_target-pfam.ttl is older than output/tsv/chembl_target-pfam.tsv ## Convert output/tsv/chembl_target-pfam.tsv => output/ttl/chembl_target-pfam.ttl -< 2023-12-08T20:58:54 chembl_target-pfam +< 2023-12-15T21:01:56 chembl_target-pfam togoid-config config/chembl_target-pfam convert -> 2023-12-08T20:58:54 chembl_target-pfam +> 2023-12-15T21:01:56 chembl_target-pfam ### Update TTL for chembl_target-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_target-reactome_pathway.ttl is older than output/tsv/chembl_target-reactome_pathway.tsv ## Convert output/tsv/chembl_target-reactome_pathway.tsv => output/ttl/chembl_target-reactome_pathway.ttl -< 2023-12-08T20:58:54 chembl_target-reactome_pathway +< 2023-12-15T21:01:56 chembl_target-reactome_pathway togoid-config config/chembl_target-reactome_pathway convert -> 2023-12-08T20:58:55 chembl_target-reactome_pathway +> 2023-12-15T21:01:57 chembl_target-reactome_pathway ### Update TTL for chembl_target-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/chembl_target-uniprot.ttl is older than output/tsv/chembl_target-uniprot.tsv ## Convert output/tsv/chembl_target-uniprot.tsv => output/ttl/chembl_target-uniprot.ttl -< 2023-12-08T20:58:55 chembl_target-uniprot +< 2023-12-15T21:01:57 chembl_target-uniprot togoid-config config/chembl_target-uniprot convert -> 2023-12-08T20:58:55 chembl_target-uniprot +> 2023-12-15T21:01:57 chembl_target-uniprot ### Update TTL for clinvar-medgen if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/clinvar-medgen.ttl is older than output/tsv/clinvar-medgen.tsv ## Convert output/tsv/clinvar-medgen.tsv => output/ttl/clinvar-medgen.ttl -< 2023-12-08T20:58:55 clinvar-medgen +< 2023-12-15T21:01:57 clinvar-medgen togoid-config config/clinvar-medgen convert -> 2023-12-08T20:59:07 clinvar-medgen +> 2023-12-15T21:02:10 clinvar-medgen ### Update TTL for cog-insdc if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/cog-insdc.ttl is newer than output/tsv/cog-insdc.tsv # => Preserving output/ttl/cog-insdc.ttl @@ -4142,201 +4130,201 @@ togoid-config config/clinvar-medgen convert ### Update TTL for doid-mesh if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/doid-mesh.ttl is older than output/tsv/doid-mesh.tsv ## Convert output/tsv/doid-mesh.tsv => output/ttl/doid-mesh.ttl -< 2023-12-08T20:59:07 doid-mesh +< 2023-12-15T21:02:10 doid-mesh togoid-config config/doid-mesh convert -> 2023-12-08T20:59:08 doid-mesh +> 2023-12-15T21:02:10 doid-mesh ### Update TTL for doid-ncit_disease if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/doid-ncit_disease.ttl is older than output/tsv/doid-ncit_disease.tsv ## Convert output/tsv/doid-ncit_disease.tsv => output/ttl/doid-ncit_disease.ttl -< 2023-12-08T20:59:08 doid-ncit_disease +< 2023-12-15T21:02:10 doid-ncit_disease togoid-config config/doid-ncit_disease convert -> 2023-12-08T20:59:08 doid-ncit_disease +> 2023-12-15T21:02:11 doid-ncit_disease ### Update TTL for doid-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/doid-omim_phenotype.ttl is older than output/tsv/doid-omim_phenotype.tsv ## Convert output/tsv/doid-omim_phenotype.tsv => output/ttl/doid-omim_phenotype.ttl -< 2023-12-08T20:59:08 doid-omim_phenotype +< 2023-12-15T21:02:11 doid-omim_phenotype togoid-config config/doid-omim_phenotype convert -> 2023-12-08T20:59:08 doid-omim_phenotype +> 2023-12-15T21:02:11 doid-omim_phenotype ### Update TTL for ensembl_gene-affy_probeset if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_gene-affy_probeset.ttl is older than output/tsv/ensembl_gene-affy_probeset.tsv ## Convert output/tsv/ensembl_gene-affy_probeset.tsv => output/ttl/ensembl_gene-affy_probeset.ttl -< 2023-12-08T20:59:08 ensembl_gene-affy_probeset +< 2023-12-15T21:02:11 ensembl_gene-affy_probeset togoid-config config/ensembl_gene-affy_probeset convert -> 2023-12-08T20:59:09 ensembl_gene-affy_probeset +> 2023-12-15T21:02:12 ensembl_gene-affy_probeset ### Update TTL for ensembl_gene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_gene-ensembl_protein.ttl is older than output/tsv/ensembl_gene-ensembl_protein.tsv ## Convert output/tsv/ensembl_gene-ensembl_protein.tsv => output/ttl/ensembl_gene-ensembl_protein.ttl -< 2023-12-08T20:59:09 ensembl_gene-ensembl_protein +< 2023-12-15T21:02:12 ensembl_gene-ensembl_protein togoid-config config/ensembl_gene-ensembl_protein convert -> 2023-12-08T21:01:01 ensembl_gene-ensembl_protein +> 2023-12-15T21:04:03 ensembl_gene-ensembl_protein ### Update TTL for ensembl_gene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_gene-ensembl_transcript.ttl is older than output/tsv/ensembl_gene-ensembl_transcript.tsv ## Convert output/tsv/ensembl_gene-ensembl_transcript.tsv => output/ttl/ensembl_gene-ensembl_transcript.ttl -< 2023-12-08T21:01:01 ensembl_gene-ensembl_transcript +< 2023-12-15T21:04:03 ensembl_gene-ensembl_transcript togoid-config config/ensembl_gene-ensembl_transcript convert -> 2023-12-08T21:03:20 ensembl_gene-ensembl_transcript +> 2023-12-15T21:06:19 ensembl_gene-ensembl_transcript ### Update TTL for ensembl_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_gene-hgnc.ttl is older than output/tsv/ensembl_gene-hgnc.tsv ## Convert output/tsv/ensembl_gene-hgnc.tsv => output/ttl/ensembl_gene-hgnc.ttl -< 2023-12-08T21:03:20 ensembl_gene-hgnc +< 2023-12-15T21:06:19 ensembl_gene-hgnc togoid-config config/ensembl_gene-hgnc convert -> 2023-12-08T21:03:21 ensembl_gene-hgnc +> 2023-12-15T21:06:20 ensembl_gene-hgnc ### Update TTL for ensembl_gene-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_gene-ncbigene.ttl is older than output/tsv/ensembl_gene-ncbigene.tsv ## Convert output/tsv/ensembl_gene-ncbigene.tsv => output/ttl/ensembl_gene-ncbigene.ttl -< 2023-12-08T21:03:21 ensembl_gene-ncbigene +< 2023-12-15T21:06:20 ensembl_gene-ncbigene togoid-config config/ensembl_gene-ncbigene convert -> 2023-12-08T21:04:12 ensembl_gene-ncbigene +> 2023-12-15T21:07:10 ensembl_gene-ncbigene ### Update TTL for ensembl_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_gene-uniprot.ttl is older than output/tsv/ensembl_gene-uniprot.tsv ## Convert output/tsv/ensembl_gene-uniprot.tsv => output/ttl/ensembl_gene-uniprot.ttl -< 2023-12-08T21:04:12 ensembl_gene-uniprot +< 2023-12-15T21:07:10 ensembl_gene-uniprot togoid-config config/ensembl_gene-uniprot convert -> 2023-12-08T21:04:54 ensembl_gene-uniprot +> 2023-12-15T21:07:53 ensembl_gene-uniprot ### Update TTL for ensembl_protein-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_protein-ensembl_transcript.ttl is older than output/tsv/ensembl_protein-ensembl_transcript.tsv ## Convert output/tsv/ensembl_protein-ensembl_transcript.tsv => output/ttl/ensembl_protein-ensembl_transcript.ttl -< 2023-12-08T21:04:54 ensembl_protein-ensembl_transcript +< 2023-12-15T21:07:53 ensembl_protein-ensembl_transcript togoid-config config/ensembl_protein-ensembl_transcript convert -> 2023-12-08T21:06:48 ensembl_protein-ensembl_transcript +> 2023-12-15T21:09:45 ensembl_protein-ensembl_transcript ### Update TTL for ensembl_transcript-affy_probeset if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_transcript-affy_probeset.ttl is older than output/tsv/ensembl_transcript-affy_probeset.tsv ## Convert output/tsv/ensembl_transcript-affy_probeset.tsv => output/ttl/ensembl_transcript-affy_probeset.ttl -< 2023-12-08T21:06:48 ensembl_transcript-affy_probeset +< 2023-12-15T21:09:45 ensembl_transcript-affy_probeset togoid-config config/ensembl_transcript-affy_probeset convert -> 2023-12-08T21:06:50 ensembl_transcript-affy_probeset +> 2023-12-15T21:09:47 ensembl_transcript-affy_probeset ### Update TTL for ensembl_transcript-go if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_transcript-go.ttl is older than output/tsv/ensembl_transcript-go.tsv ## Convert output/tsv/ensembl_transcript-go.tsv => output/ttl/ensembl_transcript-go.ttl -< 2023-12-08T21:06:50 ensembl_transcript-go +< 2023-12-15T21:09:47 ensembl_transcript-go togoid-config config/ensembl_transcript-go convert -> 2023-12-08T21:17:48 ensembl_transcript-go +> 2023-12-15T21:20:40 ensembl_transcript-go ### Update TTL for ensembl_transcript-hgnc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_transcript-hgnc.ttl is older than output/tsv/ensembl_transcript-hgnc.tsv ## Convert output/tsv/ensembl_transcript-hgnc.tsv => output/ttl/ensembl_transcript-hgnc.ttl -< 2023-12-08T21:17:48 ensembl_transcript-hgnc +< 2023-12-15T21:20:40 ensembl_transcript-hgnc togoid-config config/ensembl_transcript-hgnc convert -> 2023-12-08T21:17:50 ensembl_transcript-hgnc +> 2023-12-15T21:20:42 ensembl_transcript-hgnc ### Update TTL for ensembl_transcript-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ensembl_transcript-refseq_rna.ttl is older than output/tsv/ensembl_transcript-refseq_rna.tsv ## Convert output/tsv/ensembl_transcript-refseq_rna.tsv => output/ttl/ensembl_transcript-refseq_rna.ttl -< 2023-12-08T21:17:50 ensembl_transcript-refseq_rna +< 2023-12-15T21:20:42 ensembl_transcript-refseq_rna togoid-config config/ensembl_transcript-refseq_rna convert -> 2023-12-08T21:19:14 ensembl_transcript-refseq_rna +> 2023-12-15T21:22:07 ensembl_transcript-refseq_rna ### Update TTL for gea-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/gea-bioproject.ttl is older than output/tsv/gea-bioproject.tsv ## Convert output/tsv/gea-bioproject.tsv => output/ttl/gea-bioproject.ttl -< 2023-12-08T21:19:15 gea-bioproject +< 2023-12-15T21:22:07 gea-bioproject togoid-config config/gea-bioproject convert -> 2023-12-08T21:19:15 gea-bioproject +> 2023-12-15T21:22:07 gea-bioproject ### Update TTL for gea-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/gea-biosample.ttl is older than output/tsv/gea-biosample.tsv ## Convert output/tsv/gea-biosample.tsv => output/ttl/gea-biosample.ttl -< 2023-12-08T21:19:15 gea-biosample +< 2023-12-15T21:22:07 gea-biosample togoid-config config/gea-biosample convert -> 2023-12-08T21:19:15 gea-biosample +> 2023-12-15T21:22:08 gea-biosample ### Update TTL for glytoucan-doid if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/glytoucan-doid.ttl is older than output/tsv/glytoucan-doid.tsv ## Convert output/tsv/glytoucan-doid.tsv => output/ttl/glytoucan-doid.ttl -< 2023-12-08T21:19:15 glytoucan-doid +< 2023-12-15T21:22:08 glytoucan-doid togoid-config config/glytoucan-doid convert -> 2023-12-08T21:19:15 glytoucan-doid +> 2023-12-15T21:22:08 glytoucan-doid ### Update TTL for glytoucan-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/glytoucan-ncbigene.ttl is older than output/tsv/glytoucan-ncbigene.tsv ## Convert output/tsv/glytoucan-ncbigene.tsv => output/ttl/glytoucan-ncbigene.ttl -< 2023-12-08T21:19:15 glytoucan-ncbigene +< 2023-12-15T21:22:08 glytoucan-ncbigene togoid-config config/glytoucan-ncbigene convert -> 2023-12-08T21:19:15 glytoucan-ncbigene +> 2023-12-15T21:22:08 glytoucan-ncbigene ### Update TTL for glytoucan-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/glytoucan-uniprot.ttl is older than output/tsv/glytoucan-uniprot.tsv ## Convert output/tsv/glytoucan-uniprot.tsv => output/ttl/glytoucan-uniprot.ttl -< 2023-12-08T21:19:15 glytoucan-uniprot +< 2023-12-15T21:22:08 glytoucan-uniprot togoid-config config/glytoucan-uniprot convert -> 2023-12-08T21:19:16 glytoucan-uniprot +> 2023-12-15T21:22:08 glytoucan-uniprot ### Update TTL for hgnc-ccds if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-ccds.ttl is older than output/tsv/hgnc-ccds.tsv ## Convert output/tsv/hgnc-ccds.tsv => output/ttl/hgnc-ccds.ttl -< 2023-12-08T21:19:16 hgnc-ccds +< 2023-12-15T21:22:08 hgnc-ccds togoid-config config/hgnc-ccds convert -> 2023-12-08T21:19:16 hgnc-ccds +> 2023-12-15T21:22:09 hgnc-ccds ### Update TTL for hgnc-ec if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-ec.ttl is older than output/tsv/hgnc-ec.tsv ## Convert output/tsv/hgnc-ec.tsv => output/ttl/hgnc-ec.ttl -< 2023-12-08T21:19:16 hgnc-ec +< 2023-12-15T21:22:09 hgnc-ec togoid-config config/hgnc-ec convert -> 2023-12-08T21:19:17 hgnc-ec +> 2023-12-15T21:22:09 hgnc-ec ### Update TTL for hgnc-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-ensembl_gene.ttl is older than output/tsv/hgnc-ensembl_gene.tsv ## Convert output/tsv/hgnc-ensembl_gene.tsv => output/ttl/hgnc-ensembl_gene.ttl -< 2023-12-08T21:19:17 hgnc-ensembl_gene +< 2023-12-15T21:22:09 hgnc-ensembl_gene togoid-config config/hgnc-ensembl_gene convert -> 2023-12-08T21:19:17 hgnc-ensembl_gene +> 2023-12-15T21:22:09 hgnc-ensembl_gene ### Update TTL for hgnc-hgnc_symbol if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-hgnc_symbol.ttl is older than output/tsv/hgnc-hgnc_symbol.tsv ## Convert output/tsv/hgnc-hgnc_symbol.tsv => output/ttl/hgnc-hgnc_symbol.ttl -< 2023-12-08T21:19:17 hgnc-hgnc_symbol +< 2023-12-15T21:22:09 hgnc-hgnc_symbol togoid-config config/hgnc-hgnc_symbol convert -> 2023-12-08T21:19:18 hgnc-hgnc_symbol +> 2023-12-15T21:22:10 hgnc-hgnc_symbol ### Update TTL for hgnc-insdc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-insdc.ttl is older than output/tsv/hgnc-insdc.tsv ## Convert output/tsv/hgnc-insdc.tsv => output/ttl/hgnc-insdc.ttl -< 2023-12-08T21:19:18 hgnc-insdc +< 2023-12-15T21:22:10 hgnc-insdc togoid-config config/hgnc-insdc convert -> 2023-12-08T21:19:18 hgnc-insdc +> 2023-12-15T21:22:10 hgnc-insdc ### Update TTL for hgnc-lrg if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-lrg.ttl is older than output/tsv/hgnc-lrg.tsv ## Convert output/tsv/hgnc-lrg.tsv => output/ttl/hgnc-lrg.ttl -< 2023-12-08T21:19:18 hgnc-lrg +< 2023-12-15T21:22:10 hgnc-lrg togoid-config config/hgnc-lrg convert -> 2023-12-08T21:19:18 hgnc-lrg +> 2023-12-15T21:22:10 hgnc-lrg ### Update TTL for hgnc-mgi_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-mgi_gene.ttl is older than output/tsv/hgnc-mgi_gene.tsv ## Convert output/tsv/hgnc-mgi_gene.tsv => output/ttl/hgnc-mgi_gene.ttl -< 2023-12-08T21:19:18 hgnc-mgi_gene +< 2023-12-15T21:22:10 hgnc-mgi_gene togoid-config config/hgnc-mgi_gene convert -> 2023-12-08T21:19:19 hgnc-mgi_gene +> 2023-12-15T21:22:11 hgnc-mgi_gene ### Update TTL for hgnc-mirbase if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-mirbase.ttl is older than output/tsv/hgnc-mirbase.tsv ## Convert output/tsv/hgnc-mirbase.tsv => output/ttl/hgnc-mirbase.ttl -< 2023-12-08T21:19:19 hgnc-mirbase +< 2023-12-15T21:22:11 hgnc-mirbase togoid-config config/hgnc-mirbase convert -> 2023-12-08T21:19:19 hgnc-mirbase +> 2023-12-15T21:22:11 hgnc-mirbase ### Update TTL for hgnc-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-ncbigene.ttl is older than output/tsv/hgnc-ncbigene.tsv ## Convert output/tsv/hgnc-ncbigene.tsv => output/ttl/hgnc-ncbigene.ttl -< 2023-12-08T21:19:19 hgnc-ncbigene +< 2023-12-15T21:22:11 hgnc-ncbigene togoid-config config/hgnc-ncbigene convert -> 2023-12-08T21:19:20 hgnc-ncbigene +> 2023-12-15T21:22:11 hgnc-ncbigene ### Update TTL for hgnc-omim_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-omim_gene.ttl is older than output/tsv/hgnc-omim_gene.tsv ## Convert output/tsv/hgnc-omim_gene.tsv => output/ttl/hgnc-omim_gene.ttl -< 2023-12-08T21:19:20 hgnc-omim_gene +< 2023-12-15T21:22:11 hgnc-omim_gene togoid-config config/hgnc-omim_gene convert -> 2023-12-08T21:19:20 hgnc-omim_gene +> 2023-12-15T21:22:12 hgnc-omim_gene ### Update TTL for hgnc-pubmed if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-pubmed.ttl is older than output/tsv/hgnc-pubmed.tsv ## Convert output/tsv/hgnc-pubmed.tsv => output/ttl/hgnc-pubmed.ttl -< 2023-12-08T21:19:20 hgnc-pubmed +< 2023-12-15T21:22:12 hgnc-pubmed togoid-config config/hgnc-pubmed convert -> 2023-12-08T21:19:20 hgnc-pubmed +> 2023-12-15T21:22:12 hgnc-pubmed ### Update TTL for hgnc-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-refseq_rna.ttl is older than output/tsv/hgnc-refseq_rna.tsv ## Convert output/tsv/hgnc-refseq_rna.tsv => output/ttl/hgnc-refseq_rna.ttl -< 2023-12-08T21:19:20 hgnc-refseq_rna +< 2023-12-15T21:22:12 hgnc-refseq_rna togoid-config config/hgnc-refseq_rna convert -> 2023-12-08T21:19:21 hgnc-refseq_rna +> 2023-12-15T21:22:12 hgnc-refseq_rna ### Update TTL for hgnc-rgd if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-rgd.ttl is older than output/tsv/hgnc-rgd.tsv ## Convert output/tsv/hgnc-rgd.tsv => output/ttl/hgnc-rgd.ttl -< 2023-12-08T21:19:21 hgnc-rgd +< 2023-12-15T21:22:12 hgnc-rgd togoid-config config/hgnc-rgd convert -> 2023-12-08T21:19:21 hgnc-rgd +> 2023-12-15T21:22:13 hgnc-rgd ### Update TTL for hgnc-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hgnc-uniprot.ttl is older than output/tsv/hgnc-uniprot.tsv ## Convert output/tsv/hgnc-uniprot.tsv => output/ttl/hgnc-uniprot.ttl -< 2023-12-08T21:19:21 hgnc-uniprot +< 2023-12-15T21:22:13 hgnc-uniprot togoid-config config/hgnc-uniprot convert -> 2023-12-08T21:19:22 hgnc-uniprot +> 2023-12-15T21:22:13 hgnc-uniprot ### Update TTL for hmdb-chebi if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/hmdb-chebi.ttl is newer than output/tsv/hmdb-chebi.tsv # => Preserving output/ttl/hmdb-chebi.ttl @@ -4355,9 +4343,9 @@ togoid-config config/hgnc-uniprot convert ### Update TTL for hp_inheritance-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/hp_inheritance-omim_phenotype.ttl is older than output/tsv/hp_inheritance-omim_phenotype.tsv ## Convert output/tsv/hp_inheritance-omim_phenotype.tsv => output/ttl/hp_inheritance-omim_phenotype.ttl -< 2023-12-08T21:19:22 hp_inheritance-omim_phenotype +< 2023-12-15T21:22:13 hp_inheritance-omim_phenotype togoid-config config/hp_inheritance-omim_phenotype convert -> 2023-12-08T21:19:22 hp_inheritance-omim_phenotype +> 2023-12-15T21:22:13 hp_inheritance-omim_phenotype ### Update TTL for hp_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/hp_phenotype-omim_phenotype.ttl is newer than output/tsv/hp_phenotype-omim_phenotype.tsv # => Preserving output/ttl/hp_phenotype-omim_phenotype.ttl @@ -4367,27 +4355,27 @@ togoid-config config/hp_inheritance-omim_phenotype convert ### Update TTL for insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/insdc-bioproject.ttl is older than output/tsv/insdc-bioproject.tsv ## Convert output/tsv/insdc-bioproject.tsv => output/ttl/insdc-bioproject.ttl -< 2023-12-08T21:19:22 insdc-bioproject +< 2023-12-15T21:22:13 insdc-bioproject togoid-config config/insdc-bioproject convert -> 2023-12-08T21:28:24 insdc-bioproject +> 2023-12-15T21:31:13 insdc-bioproject ### Update TTL for insdc-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/insdc-biosample.ttl is older than output/tsv/insdc-biosample.tsv ## Convert output/tsv/insdc-biosample.tsv => output/ttl/insdc-biosample.ttl -< 2023-12-08T21:28:24 insdc-biosample +< 2023-12-15T21:31:13 insdc-biosample togoid-config config/insdc-biosample convert -> 2023-12-08T22:06:32 insdc-biosample +> 2023-12-15T22:09:18 insdc-biosample ### Update TTL for insdc_master-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/insdc_master-bioproject.ttl is older than output/tsv/insdc_master-bioproject.tsv ## Convert output/tsv/insdc_master-bioproject.tsv => output/ttl/insdc_master-bioproject.ttl -< 2023-12-08T22:06:32 insdc_master-bioproject +< 2023-12-15T22:09:18 insdc_master-bioproject togoid-config config/insdc_master-bioproject convert -> 2023-12-08T22:06:44 insdc_master-bioproject +> 2023-12-15T22:09:30 insdc_master-bioproject ### Update TTL for insdc_master-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/insdc_master-biosample.ttl is older than output/tsv/insdc_master-biosample.tsv ## Convert output/tsv/insdc_master-biosample.tsv => output/ttl/insdc_master-biosample.ttl -< 2023-12-08T22:06:44 insdc_master-biosample +< 2023-12-15T22:09:30 insdc_master-biosample togoid-config config/insdc_master-biosample convert -> 2023-12-08T22:06:57 insdc_master-biosample +> 2023-12-15T22:09:43 insdc_master-biosample ### Update TTL for interpro-go if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/interpro-go.ttl is newer than output/tsv/interpro-go.tsv # => Preserving output/ttl/interpro-go.ttl @@ -4415,303 +4403,303 @@ togoid-config config/insdc_master-biosample convert ### Update TTL for jga_study-jga_dataset if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/jga_study-jga_dataset.ttl is older than output/tsv/jga_study-jga_dataset.tsv ## Convert output/tsv/jga_study-jga_dataset.tsv => output/ttl/jga_study-jga_dataset.ttl -< 2023-12-08T22:06:57 jga_study-jga_dataset +< 2023-12-15T22:09:43 jga_study-jga_dataset togoid-config config/jga_study-jga_dataset convert -> 2023-12-08T22:06:57 jga_study-jga_dataset +> 2023-12-15T22:09:43 jga_study-jga_dataset ### Update TTL for jga_study-nbdc_human_db if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/jga_study-nbdc_human_db.ttl is older than output/tsv/jga_study-nbdc_human_db.tsv ## Convert output/tsv/jga_study-nbdc_human_db.tsv => output/ttl/jga_study-nbdc_human_db.ttl -< 2023-12-08T22:06:57 jga_study-nbdc_human_db +< 2023-12-15T22:09:43 jga_study-nbdc_human_db togoid-config config/jga_study-nbdc_human_db convert -> 2023-12-08T22:06:57 jga_study-nbdc_human_db +> 2023-12-15T22:09:43 jga_study-nbdc_human_db ### Update TTL for jga_study-pubmed if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/jga_study-pubmed.ttl is older than output/tsv/jga_study-pubmed.tsv ## Convert output/tsv/jga_study-pubmed.tsv => output/ttl/jga_study-pubmed.ttl -< 2023-12-08T22:06:57 jga_study-pubmed +< 2023-12-15T22:09:43 jga_study-pubmed togoid-config config/jga_study-pubmed convert -> 2023-12-08T22:06:58 jga_study-pubmed +> 2023-12-15T22:09:43 jga_study-pubmed ### Update TTL for lipidmaps-chebi if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/lipidmaps-chebi.ttl is older than output/tsv/lipidmaps-chebi.tsv ## Convert output/tsv/lipidmaps-chebi.tsv => output/ttl/lipidmaps-chebi.ttl -< 2023-12-08T22:06:58 lipidmaps-chebi +< 2023-12-15T22:09:43 lipidmaps-chebi togoid-config config/lipidmaps-chebi convert -> 2023-12-08T22:06:58 lipidmaps-chebi +> 2023-12-15T22:09:44 lipidmaps-chebi ### Update TTL for lipidmaps-inchi_key if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/lipidmaps-inchi_key.ttl is older than output/tsv/lipidmaps-inchi_key.tsv ## Convert output/tsv/lipidmaps-inchi_key.tsv => output/ttl/lipidmaps-inchi_key.ttl -< 2023-12-08T22:06:58 lipidmaps-inchi_key +< 2023-12-15T22:09:44 lipidmaps-inchi_key togoid-config config/lipidmaps-inchi_key convert -> 2023-12-08T22:06:59 lipidmaps-inchi_key +> 2023-12-15T22:09:44 lipidmaps-inchi_key ### Update TTL for lipidmaps-swisslipids if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/lipidmaps-swisslipids.ttl is older than output/tsv/lipidmaps-swisslipids.tsv ## Convert output/tsv/lipidmaps-swisslipids.tsv => output/ttl/lipidmaps-swisslipids.ttl -< 2023-12-08T22:06:59 lipidmaps-swisslipids +< 2023-12-15T22:09:44 lipidmaps-swisslipids togoid-config config/lipidmaps-swisslipids convert -> 2023-12-08T22:06:59 lipidmaps-swisslipids +> 2023-12-15T22:09:45 lipidmaps-swisslipids ### Update TTL for mbgd_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mbgd_gene-uniprot.ttl is older than output/tsv/mbgd_gene-uniprot.tsv ## Convert output/tsv/mbgd_gene-uniprot.tsv => output/ttl/mbgd_gene-uniprot.ttl -< 2023-12-08T22:06:59 mbgd_gene-uniprot +< 2023-12-15T22:09:45 mbgd_gene-uniprot togoid-config config/mbgd_gene-uniprot convert -> 2023-12-08T22:58:59 mbgd_gene-uniprot +> 2023-12-15T23:01:00 mbgd_gene-uniprot ### Update TTL for mbgd_organism-taxonomy if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mbgd_organism-taxonomy.ttl is older than output/tsv/mbgd_organism-taxonomy.tsv ## Convert output/tsv/mbgd_organism-taxonomy.tsv => output/ttl/mbgd_organism-taxonomy.ttl -< 2023-12-08T22:58:59 mbgd_organism-taxonomy +< 2023-12-15T23:01:00 mbgd_organism-taxonomy togoid-config config/mbgd_organism-taxonomy convert -> 2023-12-08T22:58:59 mbgd_organism-taxonomy +> 2023-12-15T23:01:00 mbgd_organism-taxonomy ### Update TTL for medgen-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/medgen-hp_phenotype.ttl is older than output/tsv/medgen-hp_phenotype.tsv ## Convert output/tsv/medgen-hp_phenotype.tsv => output/ttl/medgen-hp_phenotype.ttl -< 2023-12-08T22:58:59 medgen-hp_phenotype +< 2023-12-15T23:01:00 medgen-hp_phenotype togoid-config config/medgen-hp_phenotype convert -> 2023-12-08T22:58:59 medgen-hp_phenotype +> 2023-12-15T23:01:01 medgen-hp_phenotype ### Update TTL for medgen-mesh if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/medgen-mesh.ttl is older than output/tsv/medgen-mesh.tsv ## Convert output/tsv/medgen-mesh.tsv => output/ttl/medgen-mesh.ttl -< 2023-12-08T22:58:59 medgen-mesh +< 2023-12-15T23:01:01 medgen-mesh togoid-config config/medgen-mesh convert -> 2023-12-08T22:59:00 medgen-mesh +> 2023-12-15T23:01:01 medgen-mesh ### Update TTL for medgen-mondo if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/medgen-mondo.ttl is older than output/tsv/medgen-mondo.tsv ## Convert output/tsv/medgen-mondo.tsv => output/ttl/medgen-mondo.ttl -< 2023-12-08T22:59:00 medgen-mondo +< 2023-12-15T23:01:01 medgen-mondo togoid-config config/medgen-mondo convert -> 2023-12-08T22:59:00 medgen-mondo +> 2023-12-15T23:01:01 medgen-mondo ### Update TTL for medgen-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/medgen-ncbigene.ttl is older than output/tsv/medgen-ncbigene.tsv ## Convert output/tsv/medgen-ncbigene.tsv => output/ttl/medgen-ncbigene.ttl -< 2023-12-08T22:59:00 medgen-ncbigene +< 2023-12-15T23:01:01 medgen-ncbigene togoid-config config/medgen-ncbigene convert -> 2023-12-08T22:59:00 medgen-ncbigene +> 2023-12-15T23:01:02 medgen-ncbigene ### Update TTL for medgen-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/medgen-omim_phenotype.ttl is older than output/tsv/medgen-omim_phenotype.tsv ## Convert output/tsv/medgen-omim_phenotype.tsv => output/ttl/medgen-omim_phenotype.ttl -< 2023-12-08T22:59:00 medgen-omim_phenotype +< 2023-12-15T23:01:02 medgen-omim_phenotype togoid-config config/medgen-omim_phenotype convert -> 2023-12-08T22:59:01 medgen-omim_phenotype +> 2023-12-15T23:01:02 medgen-omim_phenotype ### Update TTL for medgen-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/medgen-orphanet_phenotype.ttl is older than output/tsv/medgen-orphanet_phenotype.tsv ## Convert output/tsv/medgen-orphanet_phenotype.tsv => output/ttl/medgen-orphanet_phenotype.ttl -< 2023-12-08T22:59:01 medgen-orphanet_phenotype +< 2023-12-15T23:01:02 medgen-orphanet_phenotype togoid-config config/medgen-orphanet_phenotype convert -> 2023-12-08T22:59:01 medgen-orphanet_phenotype +> 2023-12-15T23:01:02 medgen-orphanet_phenotype ### Update TTL for mgi_gene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_gene-ensembl_gene.ttl is older than output/tsv/mgi_gene-ensembl_gene.tsv ## Convert output/tsv/mgi_gene-ensembl_gene.tsv => output/ttl/mgi_gene-ensembl_gene.ttl -< 2023-12-08T22:59:01 mgi_gene-ensembl_gene +< 2023-12-15T23:01:02 mgi_gene-ensembl_gene togoid-config config/mgi_gene-ensembl_gene convert -> 2023-12-08T22:59:02 mgi_gene-ensembl_gene +> 2023-12-15T23:01:03 mgi_gene-ensembl_gene ### Update TTL for mgi_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_gene-hgnc.ttl is older than output/tsv/mgi_gene-hgnc.tsv ## Convert output/tsv/mgi_gene-hgnc.tsv => output/ttl/mgi_gene-hgnc.ttl -< 2023-12-08T22:59:02 mgi_gene-hgnc +< 2023-12-15T23:01:03 mgi_gene-hgnc togoid-config config/mgi_gene-hgnc convert -> 2023-12-08T22:59:02 mgi_gene-hgnc +> 2023-12-15T23:01:03 mgi_gene-hgnc ### Update TTL for mgi_gene-mgi_allele if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_gene-mgi_allele.ttl is older than output/tsv/mgi_gene-mgi_allele.tsv ## Convert output/tsv/mgi_gene-mgi_allele.tsv => output/ttl/mgi_gene-mgi_allele.ttl -< 2023-12-08T22:59:02 mgi_gene-mgi_allele +< 2023-12-15T23:01:03 mgi_gene-mgi_allele togoid-config config/mgi_gene-mgi_allele convert -> 2023-12-08T22:59:03 mgi_gene-mgi_allele +> 2023-12-15T23:01:04 mgi_gene-mgi_allele ### Update TTL for mgi_gene-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_gene-ncbigene.ttl is older than output/tsv/mgi_gene-ncbigene.tsv ## Convert output/tsv/mgi_gene-ncbigene.tsv => output/ttl/mgi_gene-ncbigene.ttl -< 2023-12-08T22:59:03 mgi_gene-ncbigene +< 2023-12-15T23:01:04 mgi_gene-ncbigene togoid-config config/mgi_gene-ncbigene convert -> 2023-12-08T22:59:04 mgi_gene-ncbigene +> 2023-12-15T23:01:05 mgi_gene-ncbigene ### Update TTL for mgi_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_gene-uniprot.ttl is older than output/tsv/mgi_gene-uniprot.tsv ## Convert output/tsv/mgi_gene-uniprot.tsv => output/ttl/mgi_gene-uniprot.ttl -< 2023-12-08T22:59:04 mgi_gene-uniprot +< 2023-12-15T23:01:05 mgi_gene-uniprot togoid-config config/mgi_gene-uniprot convert -> 2023-12-08T22:59:05 mgi_gene-uniprot +> 2023-12-15T23:01:05 mgi_gene-uniprot ### Update TTL for mgi_genotype-doid if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_genotype-doid.ttl is older than output/tsv/mgi_genotype-doid.tsv ## Convert output/tsv/mgi_genotype-doid.tsv => output/ttl/mgi_genotype-doid.ttl -< 2023-12-08T22:59:05 mgi_genotype-doid +< 2023-12-15T23:01:05 mgi_genotype-doid togoid-config config/mgi_genotype-doid convert -> 2023-12-08T22:59:05 mgi_genotype-doid +> 2023-12-15T23:01:06 mgi_genotype-doid ### Update TTL for mgi_genotype-mgi_allele if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_genotype-mgi_allele.ttl is older than output/tsv/mgi_genotype-mgi_allele.tsv ## Convert output/tsv/mgi_genotype-mgi_allele.tsv => output/ttl/mgi_genotype-mgi_allele.ttl -< 2023-12-08T22:59:05 mgi_genotype-mgi_allele +< 2023-12-15T23:01:06 mgi_genotype-mgi_allele togoid-config config/mgi_genotype-mgi_allele convert -> 2023-12-08T22:59:06 mgi_genotype-mgi_allele +> 2023-12-15T23:01:07 mgi_genotype-mgi_allele ### Update TTL for mgi_genotype-mp if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mgi_genotype-mp.ttl is older than output/tsv/mgi_genotype-mp.tsv ## Convert output/tsv/mgi_genotype-mp.tsv => output/ttl/mgi_genotype-mp.ttl -< 2023-12-08T22:59:06 mgi_genotype-mp +< 2023-12-15T23:01:07 mgi_genotype-mp togoid-config config/mgi_genotype-mp convert -> 2023-12-08T22:59:09 mgi_genotype-mp +> 2023-12-15T23:01:10 mgi_genotype-mp ### Update TTL for mondo-doid if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mondo-doid.ttl is older than output/tsv/mondo-doid.tsv ## Convert output/tsv/mondo-doid.tsv => output/ttl/mondo-doid.ttl -< 2023-12-08T22:59:09 mondo-doid +< 2023-12-15T23:01:10 mondo-doid togoid-config config/mondo-doid convert -> 2023-12-08T22:59:10 mondo-doid +> 2023-12-15T23:01:10 mondo-doid ### Update TTL for mondo-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mondo-hp_phenotype.ttl is older than output/tsv/mondo-hp_phenotype.tsv ## Convert output/tsv/mondo-hp_phenotype.tsv => output/ttl/mondo-hp_phenotype.ttl -< 2023-12-08T22:59:10 mondo-hp_phenotype +< 2023-12-15T23:01:10 mondo-hp_phenotype togoid-config config/mondo-hp_phenotype convert -> 2023-12-08T22:59:10 mondo-hp_phenotype +> 2023-12-15T23:01:10 mondo-hp_phenotype ### Update TTL for mondo-meddra if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mondo-meddra.ttl is older than output/tsv/mondo-meddra.tsv ## Convert output/tsv/mondo-meddra.tsv => output/ttl/mondo-meddra.ttl -< 2023-12-08T22:59:10 mondo-meddra +< 2023-12-15T23:01:10 mondo-meddra togoid-config config/mondo-meddra convert -> 2023-12-08T22:59:10 mondo-meddra +> 2023-12-15T23:01:11 mondo-meddra ### Update TTL for mondo-mesh if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mondo-mesh.ttl is older than output/tsv/mondo-mesh.tsv ## Convert output/tsv/mondo-mesh.tsv => output/ttl/mondo-mesh.ttl -< 2023-12-08T22:59:10 mondo-mesh +< 2023-12-15T23:01:11 mondo-mesh togoid-config config/mondo-mesh convert -> 2023-12-08T22:59:10 mondo-mesh +> 2023-12-15T23:01:11 mondo-mesh ### Update TTL for mondo-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mondo-omim_phenotype.ttl is older than output/tsv/mondo-omim_phenotype.tsv ## Convert output/tsv/mondo-omim_phenotype.tsv => output/ttl/mondo-omim_phenotype.ttl -< 2023-12-08T22:59:10 mondo-omim_phenotype +< 2023-12-15T23:01:11 mondo-omim_phenotype togoid-config config/mondo-omim_phenotype convert -> 2023-12-08T22:59:11 mondo-omim_phenotype +> 2023-12-15T23:01:11 mondo-omim_phenotype ### Update TTL for mondo-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/mondo-orphanet_phenotype.ttl is older than output/tsv/mondo-orphanet_phenotype.tsv ## Convert output/tsv/mondo-orphanet_phenotype.tsv => output/ttl/mondo-orphanet_phenotype.ttl -< 2023-12-08T22:59:11 mondo-orphanet_phenotype +< 2023-12-15T23:01:11 mondo-orphanet_phenotype togoid-config config/mondo-orphanet_phenotype convert -> 2023-12-08T22:59:11 mondo-orphanet_phenotype +> 2023-12-15T23:01:12 mondo-orphanet_phenotype ### Update TTL for nando-mondo if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/nando-mondo.ttl is older than output/tsv/nando-mondo.tsv ## Convert output/tsv/nando-mondo.tsv => output/ttl/nando-mondo.ttl -< 2023-12-08T22:59:11 nando-mondo +< 2023-12-15T23:01:12 nando-mondo togoid-config config/nando-mondo convert -> 2023-12-08T22:59:11 nando-mondo +> 2023-12-15T23:01:12 nando-mondo ### Update TTL for ncbigene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-ensembl_gene.ttl is older than output/tsv/ncbigene-ensembl_gene.tsv ## Convert output/tsv/ncbigene-ensembl_gene.tsv => output/ttl/ncbigene-ensembl_gene.ttl -< 2023-12-08T22:59:11 ncbigene-ensembl_gene +< 2023-12-15T23:01:12 ncbigene-ensembl_gene togoid-config config/ncbigene-ensembl_gene convert -> 2023-12-08T23:00:29 ncbigene-ensembl_gene +> 2023-12-15T23:02:30 ncbigene-ensembl_gene ### Update TTL for ncbigene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-ensembl_protein.ttl is older than output/tsv/ncbigene-ensembl_protein.tsv ## Convert output/tsv/ncbigene-ensembl_protein.tsv => output/ttl/ncbigene-ensembl_protein.ttl -< 2023-12-08T23:00:29 ncbigene-ensembl_protein +< 2023-12-15T23:02:30 ncbigene-ensembl_protein togoid-config config/ncbigene-ensembl_protein convert -> 2023-12-08T23:01:59 ncbigene-ensembl_protein +> 2023-12-15T23:03:58 ncbigene-ensembl_protein ### Update TTL for ncbigene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-ensembl_transcript.ttl is older than output/tsv/ncbigene-ensembl_transcript.tsv ## Convert output/tsv/ncbigene-ensembl_transcript.tsv => output/ttl/ncbigene-ensembl_transcript.ttl -< 2023-12-08T23:01:59 ncbigene-ensembl_transcript +< 2023-12-15T23:03:58 ncbigene-ensembl_transcript togoid-config config/ncbigene-ensembl_transcript convert -> 2023-12-08T23:03:34 ncbigene-ensembl_transcript +> 2023-12-15T23:05:36 ncbigene-ensembl_transcript ### Update TTL for ncbigene-flybase_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-flybase_gene.ttl is older than output/tsv/ncbigene-flybase_gene.tsv ## Convert output/tsv/ncbigene-flybase_gene.tsv => output/ttl/ncbigene-flybase_gene.ttl -< 2023-12-08T23:03:34 ncbigene-flybase_gene +< 2023-12-15T23:05:36 ncbigene-flybase_gene togoid-config config/ncbigene-flybase_gene convert -> 2023-12-08T23:03:34 ncbigene-flybase_gene +> 2023-12-15T23:05:36 ncbigene-flybase_gene ### Update TTL for ncbigene-go if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-go.ttl is older than output/tsv/ncbigene-go.tsv ## Convert output/tsv/ncbigene-go.tsv => output/ttl/ncbigene-go.ttl -< 2023-12-08T23:03:34 ncbigene-go +< 2023-12-15T23:05:36 ncbigene-go togoid-config config/ncbigene-go convert -> 2023-12-08T23:12:22 ncbigene-go +> 2023-12-15T23:16:10 ncbigene-go ### Update TTL for ncbigene-hgnc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-hgnc.ttl is older than output/tsv/ncbigene-hgnc.tsv ## Convert output/tsv/ncbigene-hgnc.tsv => output/ttl/ncbigene-hgnc.ttl -< 2023-12-08T23:12:22 ncbigene-hgnc +< 2023-12-15T23:16:10 ncbigene-hgnc togoid-config config/ncbigene-hgnc convert -> 2023-12-08T23:12:23 ncbigene-hgnc +> 2023-12-15T23:16:10 ncbigene-hgnc ### Update TTL for ncbigene-mgi_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-mgi_gene.ttl is older than output/tsv/ncbigene-mgi_gene.tsv ## Convert output/tsv/ncbigene-mgi_gene.tsv => output/ttl/ncbigene-mgi_gene.ttl -< 2023-12-08T23:12:23 ncbigene-mgi_gene +< 2023-12-15T23:16:10 ncbigene-mgi_gene togoid-config config/ncbigene-mgi_gene convert -> 2023-12-08T23:12:24 ncbigene-mgi_gene +> 2023-12-15T23:16:11 ncbigene-mgi_gene ### Update TTL for ncbigene-mirbase if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-mirbase.ttl is older than output/tsv/ncbigene-mirbase.tsv ## Convert output/tsv/ncbigene-mirbase.tsv => output/ttl/ncbigene-mirbase.ttl -< 2023-12-08T23:12:24 ncbigene-mirbase +< 2023-12-15T23:16:11 ncbigene-mirbase togoid-config config/ncbigene-mirbase convert -> 2023-12-08T23:12:24 ncbigene-mirbase +> 2023-12-15T23:16:11 ncbigene-mirbase ### Update TTL for ncbigene-omim_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-omim_gene.ttl is older than output/tsv/ncbigene-omim_gene.tsv ## Convert output/tsv/ncbigene-omim_gene.tsv => output/ttl/ncbigene-omim_gene.ttl -< 2023-12-08T23:12:24 ncbigene-omim_gene +< 2023-12-15T23:16:11 ncbigene-omim_gene togoid-config config/ncbigene-omim_gene convert -> 2023-12-08T23:12:25 ncbigene-omim_gene +> 2023-12-15T23:16:12 ncbigene-omim_gene ### Update TTL for ncbigene-refseq_genomic if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-refseq_genomic.ttl is older than output/tsv/ncbigene-refseq_genomic.tsv ## Convert output/tsv/ncbigene-refseq_genomic.tsv => output/ttl/ncbigene-refseq_genomic.ttl -< 2023-12-08T23:12:25 ncbigene-refseq_genomic +< 2023-12-15T23:16:12 ncbigene-refseq_genomic togoid-config config/ncbigene-refseq_genomic convert -> 2023-12-08T23:12:26 ncbigene-refseq_genomic +> 2023-12-15T23:16:13 ncbigene-refseq_genomic ### Update TTL for ncbigene-refseq_protein if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-refseq_protein.ttl is older than output/tsv/ncbigene-refseq_protein.tsv ## Convert output/tsv/ncbigene-refseq_protein.tsv => output/ttl/ncbigene-refseq_protein.ttl -< 2023-12-08T23:12:26 ncbigene-refseq_protein +< 2023-12-15T23:16:13 ncbigene-refseq_protein togoid-config config/ncbigene-refseq_protein convert -> 2023-12-08T23:23:33 ncbigene-refseq_protein +> 2023-12-15T23:27:21 ncbigene-refseq_protein ### Update TTL for ncbigene-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-refseq_rna.ttl is older than output/tsv/ncbigene-refseq_rna.tsv ## Convert output/tsv/ncbigene-refseq_rna.tsv => output/ttl/ncbigene-refseq_rna.ttl -< 2023-12-08T23:23:33 ncbigene-refseq_rna +< 2023-12-15T23:27:21 ncbigene-refseq_rna togoid-config config/ncbigene-refseq_rna convert -> 2023-12-08T23:33:05 ncbigene-refseq_rna +> 2023-12-15T23:36:48 ncbigene-refseq_rna ### Update TTL for ncbigene-rgd if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-rgd.ttl is older than output/tsv/ncbigene-rgd.tsv ## Convert output/tsv/ncbigene-rgd.tsv => output/ttl/ncbigene-rgd.ttl -< 2023-12-08T23:33:05 ncbigene-rgd +< 2023-12-15T23:36:48 ncbigene-rgd togoid-config config/ncbigene-rgd convert -> 2023-12-08T23:33:05 ncbigene-rgd +> 2023-12-15T23:36:49 ncbigene-rgd ### Update TTL for ncbigene-sgd if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-sgd.ttl is older than output/tsv/ncbigene-sgd.tsv ## Convert output/tsv/ncbigene-sgd.tsv => output/ttl/ncbigene-sgd.ttl -< 2023-12-08T23:33:05 ncbigene-sgd +< 2023-12-15T23:36:49 ncbigene-sgd togoid-config config/ncbigene-sgd convert -> 2023-12-08T23:33:06 ncbigene-sgd +> 2023-12-15T23:36:49 ncbigene-sgd ### Update TTL for ncbigene-tair if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-tair.ttl is older than output/tsv/ncbigene-tair.tsv ## Convert output/tsv/ncbigene-tair.tsv => output/ttl/ncbigene-tair.ttl -< 2023-12-08T23:33:06 ncbigene-tair +< 2023-12-15T23:36:49 ncbigene-tair togoid-config config/ncbigene-tair convert -> 2023-12-08T23:33:06 ncbigene-tair +> 2023-12-15T23:36:50 ncbigene-tair ### Update TTL for ncbigene-taxonomy if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-taxonomy.ttl is older than output/tsv/ncbigene-taxonomy.tsv ## Convert output/tsv/ncbigene-taxonomy.tsv => output/ttl/ncbigene-taxonomy.ttl -< 2023-12-08T23:33:06 ncbigene-taxonomy +< 2023-12-15T23:36:50 ncbigene-taxonomy togoid-config config/ncbigene-taxonomy convert -> 2023-12-08T23:40:26 ncbigene-taxonomy +> 2023-12-15T23:44:25 ncbigene-taxonomy ### Update TTL for ncbigene-vgnc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-vgnc.ttl is older than output/tsv/ncbigene-vgnc.tsv ## Convert output/tsv/ncbigene-vgnc.tsv => output/ttl/ncbigene-vgnc.ttl -< 2023-12-08T23:40:26 ncbigene-vgnc +< 2023-12-15T23:44:25 ncbigene-vgnc togoid-config config/ncbigene-vgnc convert -> 2023-12-08T23:40:27 ncbigene-vgnc +> 2023-12-15T23:44:26 ncbigene-vgnc ### Update TTL for ncbigene-wormbase_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-wormbase_gene.ttl is older than output/tsv/ncbigene-wormbase_gene.tsv ## Convert output/tsv/ncbigene-wormbase_gene.tsv => output/ttl/ncbigene-wormbase_gene.ttl -< 2023-12-08T23:40:27 ncbigene-wormbase_gene +< 2023-12-15T23:44:26 ncbigene-wormbase_gene togoid-config config/ncbigene-wormbase_gene convert -> 2023-12-08T23:40:27 ncbigene-wormbase_gene +> 2023-12-15T23:44:26 ncbigene-wormbase_gene ### Update TTL for ncbigene-xenbase_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-xenbase_gene.ttl is older than output/tsv/ncbigene-xenbase_gene.tsv ## Convert output/tsv/ncbigene-xenbase_gene.tsv => output/ttl/ncbigene-xenbase_gene.ttl -< 2023-12-08T23:40:27 ncbigene-xenbase_gene +< 2023-12-15T23:44:26 ncbigene-xenbase_gene togoid-config config/ncbigene-xenbase_gene convert -> 2023-12-08T23:40:28 ncbigene-xenbase_gene +> 2023-12-15T23:44:27 ncbigene-xenbase_gene ### Update TTL for ncbigene-zfin_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncbigene-zfin_gene.ttl is older than output/tsv/ncbigene-zfin_gene.tsv ## Convert output/tsv/ncbigene-zfin_gene.tsv => output/ttl/ncbigene-zfin_gene.ttl -< 2023-12-08T23:40:28 ncbigene-zfin_gene +< 2023-12-15T23:44:27 ncbigene-zfin_gene togoid-config config/ncbigene-zfin_gene convert -> 2023-12-08T23:40:28 ncbigene-zfin_gene +> 2023-12-15T23:44:27 ncbigene-zfin_gene ### Update TTL for ncit_disease-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/ncit_disease-ncit_tissue.ttl is older than output/tsv/ncit_disease-ncit_tissue.tsv ## Convert output/tsv/ncit_disease-ncit_tissue.tsv => output/ttl/ncit_disease-ncit_tissue.ttl -< 2023-12-08T23:40:28 ncit_disease-ncit_tissue +< 2023-12-15T23:44:27 ncit_disease-ncit_tissue togoid-config config/ncit_disease-ncit_tissue convert -> 2023-12-08T23:40:29 ncit_disease-ncit_tissue +> 2023-12-15T23:44:28 ncit_disease-ncit_tissue ### Update TTL for oma_protein-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/oma_protein-ensembl_gene.ttl is newer than output/tsv/oma_protein-ensembl_gene.tsv # => Preserving output/ttl/oma_protein-ensembl_gene.ttl @@ -4727,81 +4715,81 @@ togoid-config config/ncit_disease-ncit_tissue convert ### Update TTL for orphanet_gene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_gene-ensembl_gene.ttl is older than output/tsv/orphanet_gene-ensembl_gene.tsv ## Convert output/tsv/orphanet_gene-ensembl_gene.tsv => output/ttl/orphanet_gene-ensembl_gene.ttl -< 2023-12-08T23:40:29 orphanet_gene-ensembl_gene +< 2023-12-15T23:44:28 orphanet_gene-ensembl_gene togoid-config config/orphanet_gene-ensembl_gene convert -> 2023-12-08T23:40:29 orphanet_gene-ensembl_gene +> 2023-12-15T23:44:28 orphanet_gene-ensembl_gene ### Update TTL for orphanet_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_gene-hgnc.ttl is older than output/tsv/orphanet_gene-hgnc.tsv ## Convert output/tsv/orphanet_gene-hgnc.tsv => output/ttl/orphanet_gene-hgnc.ttl -< 2023-12-08T23:40:29 orphanet_gene-hgnc +< 2023-12-15T23:44:28 orphanet_gene-hgnc togoid-config config/orphanet_gene-hgnc convert -> 2023-12-08T23:40:30 orphanet_gene-hgnc +> 2023-12-15T23:44:28 orphanet_gene-hgnc ### Update TTL for orphanet_gene-omim_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_gene-omim_gene.ttl is older than output/tsv/orphanet_gene-omim_gene.tsv ## Convert output/tsv/orphanet_gene-omim_gene.tsv => output/ttl/orphanet_gene-omim_gene.ttl -< 2023-12-08T23:40:30 orphanet_gene-omim_gene +< 2023-12-15T23:44:28 orphanet_gene-omim_gene togoid-config config/orphanet_gene-omim_gene convert -> 2023-12-08T23:40:30 orphanet_gene-omim_gene +> 2023-12-15T23:44:29 orphanet_gene-omim_gene ### Update TTL for orphanet_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_gene-uniprot.ttl is older than output/tsv/orphanet_gene-uniprot.tsv ## Convert output/tsv/orphanet_gene-uniprot.tsv => output/ttl/orphanet_gene-uniprot.ttl -< 2023-12-08T23:40:30 orphanet_gene-uniprot +< 2023-12-15T23:44:29 orphanet_gene-uniprot togoid-config config/orphanet_gene-uniprot convert -> 2023-12-08T23:40:30 orphanet_gene-uniprot +> 2023-12-15T23:44:29 orphanet_gene-uniprot ### Update TTL for orphanet_phenotype-meddra if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_phenotype-meddra.ttl is older than output/tsv/orphanet_phenotype-meddra.tsv ## Convert output/tsv/orphanet_phenotype-meddra.tsv => output/ttl/orphanet_phenotype-meddra.ttl -< 2023-12-08T23:40:30 orphanet_phenotype-meddra +< 2023-12-15T23:44:29 orphanet_phenotype-meddra togoid-config config/orphanet_phenotype-meddra convert -> 2023-12-08T23:40:30 orphanet_phenotype-meddra +> 2023-12-15T23:44:29 orphanet_phenotype-meddra ### Update TTL for orphanet_phenotype-mesh if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_phenotype-mesh.ttl is older than output/tsv/orphanet_phenotype-mesh.tsv ## Convert output/tsv/orphanet_phenotype-mesh.tsv => output/ttl/orphanet_phenotype-mesh.ttl -< 2023-12-08T23:40:30 orphanet_phenotype-mesh +< 2023-12-15T23:44:29 orphanet_phenotype-mesh togoid-config config/orphanet_phenotype-mesh convert -> 2023-12-08T23:40:30 orphanet_phenotype-mesh +> 2023-12-15T23:44:29 orphanet_phenotype-mesh ### Update TTL for orphanet_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_phenotype-omim_phenotype.ttl is older than output/tsv/orphanet_phenotype-omim_phenotype.tsv ## Convert output/tsv/orphanet_phenotype-omim_phenotype.tsv => output/ttl/orphanet_phenotype-omim_phenotype.ttl -< 2023-12-08T23:40:30 orphanet_phenotype-omim_phenotype +< 2023-12-15T23:44:29 orphanet_phenotype-omim_phenotype togoid-config config/orphanet_phenotype-omim_phenotype convert -> 2023-12-08T23:40:31 orphanet_phenotype-omim_phenotype +> 2023-12-15T23:44:30 orphanet_phenotype-omim_phenotype ### Update TTL for orphanet_phenotype-orphanet_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/orphanet_phenotype-orphanet_gene.ttl is older than output/tsv/orphanet_phenotype-orphanet_gene.tsv ## Convert output/tsv/orphanet_phenotype-orphanet_gene.tsv => output/ttl/orphanet_phenotype-orphanet_gene.ttl -< 2023-12-08T23:40:31 orphanet_phenotype-orphanet_gene +< 2023-12-15T23:44:30 orphanet_phenotype-orphanet_gene togoid-config config/orphanet_phenotype-orphanet_gene convert -> 2023-12-08T23:40:31 orphanet_phenotype-orphanet_gene +> 2023-12-15T23:44:30 orphanet_phenotype-orphanet_gene ### Update TTL for pdb-go if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pdb-go.ttl is older than output/tsv/pdb-go.tsv ## Convert output/tsv/pdb-go.tsv => output/ttl/pdb-go.ttl -< 2023-12-08T23:40:31 pdb-go +< 2023-12-15T23:44:30 pdb-go togoid-config config/pdb-go convert -> 2023-12-08T23:40:43 pdb-go +> 2023-12-15T23:44:42 pdb-go ### Update TTL for pdb-interpro if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pdb-interpro.ttl is older than output/tsv/pdb-interpro.tsv ## Convert output/tsv/pdb-interpro.tsv => output/ttl/pdb-interpro.ttl -< 2023-12-08T23:40:43 pdb-interpro +< 2023-12-15T23:44:42 pdb-interpro togoid-config config/pdb-interpro convert -> 2023-12-08T23:40:49 pdb-interpro +> 2023-12-15T23:44:48 pdb-interpro ### Update TTL for pdb-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pdb-pdb_ccd.ttl is older than output/tsv/pdb-pdb_ccd.tsv ## Convert output/tsv/pdb-pdb_ccd.tsv => output/ttl/pdb-pdb_ccd.ttl -< 2023-12-08T23:40:49 pdb-pdb_ccd +< 2023-12-15T23:44:48 pdb-pdb_ccd togoid-config config/pdb-pdb_ccd convert -> 2023-12-08T23:40:53 pdb-pdb_ccd +> 2023-12-15T23:44:52 pdb-pdb_ccd ### Update TTL for pdb-pfam if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pdb-pfam.ttl is older than output/tsv/pdb-pfam.tsv ## Convert output/tsv/pdb-pfam.tsv => output/ttl/pdb-pfam.ttl -< 2023-12-08T23:40:53 pdb-pfam +< 2023-12-15T23:44:52 pdb-pfam togoid-config config/pdb-pfam convert -> 2023-12-08T23:40:56 pdb-pfam +> 2023-12-15T23:44:55 pdb-pfam ### Update TTL for pdb-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pdb-uniprot.ttl is older than output/tsv/pdb-uniprot.tsv ## Convert output/tsv/pdb-uniprot.tsv => output/ttl/pdb-uniprot.ttl -< 2023-12-08T23:40:56 pdb-uniprot +< 2023-12-15T23:44:55 pdb-uniprot togoid-config config/pdb-uniprot convert -> 2023-12-08T23:40:58 pdb-uniprot +> 2023-12-15T23:44:58 pdb-uniprot ### Update TTL for prosite-prosite_prorule if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/prosite-prosite_prorule.ttl is newer than output/tsv/prosite-prosite_prorule.tsv # => Preserving output/ttl/prosite-prosite_prorule.ttl @@ -4811,141 +4799,141 @@ togoid-config config/pdb-uniprot convert ### Update TTL for pubchem_compound-chebi if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_compound-chebi.ttl is older than output/tsv/pubchem_compound-chebi.tsv ## Convert output/tsv/pubchem_compound-chebi.tsv => output/ttl/pubchem_compound-chebi.ttl -< 2023-12-08T23:40:58 pubchem_compound-chebi +< 2023-12-15T23:44:58 pubchem_compound-chebi togoid-config config/pubchem_compound-chebi convert -> 2023-12-08T23:41:00 pubchem_compound-chebi +> 2023-12-15T23:44:59 pubchem_compound-chebi ### Update TTL for pubchem_compound-chembl_compound if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_compound-chembl_compound.ttl is older than output/tsv/pubchem_compound-chembl_compound.tsv ## Convert output/tsv/pubchem_compound-chembl_compound.tsv => output/ttl/pubchem_compound-chembl_compound.ttl -< 2023-12-08T23:41:00 pubchem_compound-chembl_compound +< 2023-12-15T23:44:59 pubchem_compound-chembl_compound togoid-config config/pubchem_compound-chembl_compound convert -> 2023-12-08T23:41:19 pubchem_compound-chembl_compound +> 2023-12-15T23:45:19 pubchem_compound-chembl_compound ### Update TTL for pubchem_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_compound-drugbank.ttl is older than output/tsv/pubchem_compound-drugbank.tsv ## Convert output/tsv/pubchem_compound-drugbank.tsv => output/ttl/pubchem_compound-drugbank.ttl -< 2023-12-08T23:41:19 pubchem_compound-drugbank +< 2023-12-15T23:45:19 pubchem_compound-drugbank togoid-config config/pubchem_compound-drugbank convert -> 2023-12-08T23:41:20 pubchem_compound-drugbank +> 2023-12-15T23:45:19 pubchem_compound-drugbank ### Update TTL for pubchem_compound-glytoucan if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_compound-glytoucan.ttl is older than output/tsv/pubchem_compound-glytoucan.tsv ## Convert output/tsv/pubchem_compound-glytoucan.tsv => output/ttl/pubchem_compound-glytoucan.ttl -< 2023-12-08T23:41:20 pubchem_compound-glytoucan +< 2023-12-15T23:45:19 pubchem_compound-glytoucan togoid-config config/pubchem_compound-glytoucan convert -> 2023-12-08T23:41:20 pubchem_compound-glytoucan +> 2023-12-15T23:45:19 pubchem_compound-glytoucan ### Update TTL for pubchem_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_compound-inchi_key.ttl is older than output/tsv/pubchem_compound-inchi_key.tsv ## Convert output/tsv/pubchem_compound-inchi_key.tsv => output/ttl/pubchem_compound-inchi_key.ttl -< 2023-12-08T23:41:20 pubchem_compound-inchi_key +< 2023-12-15T23:45:19 pubchem_compound-inchi_key togoid-config config/pubchem_compound-inchi_key convert -> 2023-12-09T00:21:01 pubchem_compound-inchi_key +> 2023-12-16T00:24:50 pubchem_compound-inchi_key ### Update TTL for pubchem_pathway-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_pathway-ncbigene.ttl is older than output/tsv/pubchem_pathway-ncbigene.tsv ## Convert output/tsv/pubchem_pathway-ncbigene.tsv => output/ttl/pubchem_pathway-ncbigene.ttl -< 2023-12-09T00:21:01 pubchem_pathway-ncbigene +< 2023-12-16T00:24:50 pubchem_pathway-ncbigene togoid-config config/pubchem_pathway-ncbigene convert -> 2023-12-09T00:21:02 pubchem_pathway-ncbigene +> 2023-12-16T00:24:51 pubchem_pathway-ncbigene ### Update TTL for pubchem_pathway-pathbank if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_pathway-pathbank.ttl is older than output/tsv/pubchem_pathway-pathbank.tsv ## Convert output/tsv/pubchem_pathway-pathbank.tsv => output/ttl/pubchem_pathway-pathbank.ttl -< 2023-12-09T00:21:02 pubchem_pathway-pathbank +< 2023-12-16T00:24:51 pubchem_pathway-pathbank togoid-config config/pubchem_pathway-pathbank convert -> 2023-12-09T00:21:03 pubchem_pathway-pathbank +> 2023-12-16T00:24:51 pubchem_pathway-pathbank ### Update TTL for pubchem_pathway-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_pathway-pubchem_compound.ttl is older than output/tsv/pubchem_pathway-pubchem_compound.tsv ## Convert output/tsv/pubchem_pathway-pubchem_compound.tsv => output/ttl/pubchem_pathway-pubchem_compound.ttl -< 2023-12-09T00:21:03 pubchem_pathway-pubchem_compound +< 2023-12-16T00:24:51 pubchem_pathway-pubchem_compound togoid-config config/pubchem_pathway-pubchem_compound convert -> 2023-12-09T00:21:12 pubchem_pathway-pubchem_compound +> 2023-12-16T00:25:00 pubchem_pathway-pubchem_compound ### Update TTL for pubchem_pathway-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_pathway-reactome_pathway.ttl is older than output/tsv/pubchem_pathway-reactome_pathway.tsv ## Convert output/tsv/pubchem_pathway-reactome_pathway.tsv => output/ttl/pubchem_pathway-reactome_pathway.ttl -< 2023-12-09T00:21:12 pubchem_pathway-reactome_pathway +< 2023-12-16T00:25:00 pubchem_pathway-reactome_pathway togoid-config config/pubchem_pathway-reactome_pathway convert -> 2023-12-09T00:21:12 pubchem_pathway-reactome_pathway +> 2023-12-16T00:25:01 pubchem_pathway-reactome_pathway ### Update TTL for pubchem_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_pathway-uniprot.ttl is older than output/tsv/pubchem_pathway-uniprot.tsv ## Convert output/tsv/pubchem_pathway-uniprot.tsv => output/ttl/pubchem_pathway-uniprot.ttl -< 2023-12-09T00:21:12 pubchem_pathway-uniprot +< 2023-12-16T00:25:01 pubchem_pathway-uniprot togoid-config config/pubchem_pathway-uniprot convert -> 2023-12-09T00:21:16 pubchem_pathway-uniprot +> 2023-12-16T00:25:05 pubchem_pathway-uniprot ### Update TTL for pubchem_pathway-wikipathways if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/pubchem_pathway-wikipathways.ttl is older than output/tsv/pubchem_pathway-wikipathways.tsv ## Convert output/tsv/pubchem_pathway-wikipathways.tsv => output/ttl/pubchem_pathway-wikipathways.ttl -< 2023-12-09T00:21:16 pubchem_pathway-wikipathways +< 2023-12-16T00:25:05 pubchem_pathway-wikipathways togoid-config config/pubchem_pathway-wikipathways convert -> 2023-12-09T00:21:16 pubchem_pathway-wikipathways +> 2023-12-16T00:25:05 pubchem_pathway-wikipathways ### Update TTL for reactome_pathway-chebi if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_pathway-chebi.ttl is older than output/tsv/reactome_pathway-chebi.tsv ## Convert output/tsv/reactome_pathway-chebi.tsv => output/ttl/reactome_pathway-chebi.ttl -< 2023-12-09T00:21:16 reactome_pathway-chebi +< 2023-12-16T00:25:05 reactome_pathway-chebi togoid-config config/reactome_pathway-chebi convert -> 2023-12-09T00:21:19 reactome_pathway-chebi +> 2023-12-16T00:25:08 reactome_pathway-chebi ### Update TTL for reactome_pathway-go if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_pathway-go.ttl is older than output/tsv/reactome_pathway-go.tsv ## Convert output/tsv/reactome_pathway-go.tsv => output/ttl/reactome_pathway-go.ttl -< 2023-12-09T00:21:19 reactome_pathway-go +< 2023-12-16T00:25:08 reactome_pathway-go togoid-config config/reactome_pathway-go convert -> 2023-12-09T00:21:19 reactome_pathway-go +> 2023-12-16T00:25:08 reactome_pathway-go ### Update TTL for reactome_pathway-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_pathway-iuphar_ligand.ttl is older than output/tsv/reactome_pathway-iuphar_ligand.tsv ## Convert output/tsv/reactome_pathway-iuphar_ligand.tsv => output/ttl/reactome_pathway-iuphar_ligand.ttl -< 2023-12-09T00:21:19 reactome_pathway-iuphar_ligand +< 2023-12-16T00:25:08 reactome_pathway-iuphar_ligand togoid-config config/reactome_pathway-iuphar_ligand convert -> 2023-12-09T00:21:20 reactome_pathway-iuphar_ligand +> 2023-12-16T00:25:09 reactome_pathway-iuphar_ligand ### Update TTL for reactome_pathway-mirbase if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_pathway-mirbase.ttl is older than output/tsv/reactome_pathway-mirbase.tsv ## Convert output/tsv/reactome_pathway-mirbase.tsv => output/ttl/reactome_pathway-mirbase.ttl -< 2023-12-09T00:21:20 reactome_pathway-mirbase +< 2023-12-16T00:25:09 reactome_pathway-mirbase togoid-config config/reactome_pathway-mirbase convert -> 2023-12-09T00:21:20 reactome_pathway-mirbase +> 2023-12-16T00:25:09 reactome_pathway-mirbase ### Update TTL for reactome_pathway-reactome_reaction if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_pathway-reactome_reaction.ttl is older than output/tsv/reactome_pathway-reactome_reaction.tsv ## Convert output/tsv/reactome_pathway-reactome_reaction.tsv => output/ttl/reactome_pathway-reactome_reaction.ttl -< 2023-12-09T00:21:20 reactome_pathway-reactome_reaction +< 2023-12-16T00:25:09 reactome_pathway-reactome_reaction togoid-config config/reactome_pathway-reactome_reaction convert -> 2023-12-09T00:21:23 reactome_pathway-reactome_reaction +> 2023-12-16T00:25:12 reactome_pathway-reactome_reaction ### Update TTL for reactome_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_pathway-uniprot.ttl is older than output/tsv/reactome_pathway-uniprot.tsv ## Convert output/tsv/reactome_pathway-uniprot.tsv => output/ttl/reactome_pathway-uniprot.ttl -< 2023-12-09T00:21:23 reactome_pathway-uniprot +< 2023-12-16T00:25:12 reactome_pathway-uniprot togoid-config config/reactome_pathway-uniprot convert -> 2023-12-09T00:21:30 reactome_pathway-uniprot +> 2023-12-16T00:25:19 reactome_pathway-uniprot ### Update TTL for reactome_reaction-chebi if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_reaction-chebi.ttl is older than output/tsv/reactome_reaction-chebi.tsv ## Convert output/tsv/reactome_reaction-chebi.tsv => output/ttl/reactome_reaction-chebi.ttl -< 2023-12-09T00:21:30 reactome_reaction-chebi +< 2023-12-16T00:25:19 reactome_reaction-chebi togoid-config config/reactome_reaction-chebi convert -> 2023-12-09T00:21:32 reactome_reaction-chebi +> 2023-12-16T00:25:20 reactome_reaction-chebi ### Update TTL for reactome_reaction-go if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_reaction-go.ttl is older than output/tsv/reactome_reaction-go.tsv ## Convert output/tsv/reactome_reaction-go.tsv => output/ttl/reactome_reaction-go.ttl -< 2023-12-09T00:21:32 reactome_reaction-go +< 2023-12-16T00:25:20 reactome_reaction-go togoid-config config/reactome_reaction-go convert -> 2023-12-09T00:21:33 reactome_reaction-go +> 2023-12-16T00:25:21 reactome_reaction-go ### Update TTL for reactome_reaction-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_reaction-iuphar_ligand.ttl is older than output/tsv/reactome_reaction-iuphar_ligand.tsv ## Convert output/tsv/reactome_reaction-iuphar_ligand.tsv => output/ttl/reactome_reaction-iuphar_ligand.ttl -< 2023-12-09T00:21:33 reactome_reaction-iuphar_ligand +< 2023-12-16T00:25:21 reactome_reaction-iuphar_ligand togoid-config config/reactome_reaction-iuphar_ligand convert -> 2023-12-09T00:21:33 reactome_reaction-iuphar_ligand +> 2023-12-16T00:25:21 reactome_reaction-iuphar_ligand ### Update TTL for reactome_reaction-mirbase if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_reaction-mirbase.ttl is older than output/tsv/reactome_reaction-mirbase.tsv ## Convert output/tsv/reactome_reaction-mirbase.tsv => output/ttl/reactome_reaction-mirbase.ttl -< 2023-12-09T00:21:33 reactome_reaction-mirbase +< 2023-12-16T00:25:21 reactome_reaction-mirbase togoid-config config/reactome_reaction-mirbase convert -> 2023-12-09T00:21:33 reactome_reaction-mirbase +> 2023-12-16T00:25:21 reactome_reaction-mirbase ### Update TTL for reactome_reaction-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/reactome_reaction-uniprot.ttl is older than output/tsv/reactome_reaction-uniprot.tsv ## Convert output/tsv/reactome_reaction-uniprot.tsv => output/ttl/reactome_reaction-uniprot.ttl -< 2023-12-09T00:21:33 reactome_reaction-uniprot +< 2023-12-16T00:25:21 reactome_reaction-uniprot togoid-config config/reactome_reaction-uniprot convert -> 2023-12-09T00:21:39 reactome_reaction-uniprot +> 2023-12-16T00:25:26 reactome_reaction-uniprot ### Update TTL for refseq_protein-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/refseq_protein-uniprot.ttl is older than output/tsv/refseq_protein-uniprot.tsv ## Convert output/tsv/refseq_protein-uniprot.tsv => output/ttl/refseq_protein-uniprot.ttl -< 2023-12-09T00:21:39 refseq_protein-uniprot +< 2023-12-16T00:25:26 refseq_protein-uniprot togoid-config config/refseq_protein-uniprot convert -> 2023-12-09T01:24:36 refseq_protein-uniprot +> 2023-12-16T01:28:11 refseq_protein-uniprot ### Update TTL for refseq_rna-dbsnp if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/refseq_rna-dbsnp.ttl is newer than output/tsv/refseq_rna-dbsnp.tsv # => Preserving output/ttl/refseq_rna-dbsnp.ttl @@ -4988,186 +4976,186 @@ togoid-config config/refseq_protein-uniprot convert ### Update TTL for sra_accession-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_accession-bioproject.ttl is older than output/tsv/sra_accession-bioproject.tsv ## Convert output/tsv/sra_accession-bioproject.tsv => output/ttl/sra_accession-bioproject.ttl -< 2023-12-09T01:24:36 sra_accession-bioproject +< 2023-12-16T01:28:11 sra_accession-bioproject togoid-config config/sra_accession-bioproject convert -> 2023-12-09T01:24:41 sra_accession-bioproject +> 2023-12-16T01:28:15 sra_accession-bioproject ### Update TTL for sra_accession-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_accession-biosample.ttl is older than output/tsv/sra_accession-biosample.tsv ## Convert output/tsv/sra_accession-biosample.tsv => output/ttl/sra_accession-biosample.ttl -< 2023-12-09T01:24:41 sra_accession-biosample +< 2023-12-16T01:28:15 sra_accession-biosample togoid-config config/sra_accession-biosample convert -> 2023-12-09T01:29:24 sra_accession-biosample +> 2023-12-16T01:33:10 sra_accession-biosample ### Update TTL for sra_accession-sra_analysis if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_accession-sra_analysis.ttl is older than output/tsv/sra_accession-sra_analysis.tsv ## Convert output/tsv/sra_accession-sra_analysis.tsv => output/ttl/sra_accession-sra_analysis.ttl -< 2023-12-09T01:29:24 sra_accession-sra_analysis +< 2023-12-16T01:33:10 sra_accession-sra_analysis togoid-config config/sra_accession-sra_analysis convert -> 2023-12-09T01:29:27 sra_accession-sra_analysis +> 2023-12-16T01:33:13 sra_accession-sra_analysis ### Update TTL for sra_accession-sra_experiment if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_accession-sra_experiment.ttl is older than output/tsv/sra_accession-sra_experiment.tsv ## Convert output/tsv/sra_accession-sra_experiment.tsv => output/ttl/sra_accession-sra_experiment.ttl -< 2023-12-09T01:29:27 sra_accession-sra_experiment +< 2023-12-16T01:33:13 sra_accession-sra_experiment togoid-config config/sra_accession-sra_experiment convert -> 2023-12-09T01:34:10 sra_accession-sra_experiment +> 2023-12-16T01:37:57 sra_accession-sra_experiment ### Update TTL for sra_accession-sra_project if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_accession-sra_project.ttl is older than output/tsv/sra_accession-sra_project.tsv ## Convert output/tsv/sra_accession-sra_project.tsv => output/ttl/sra_accession-sra_project.ttl -< 2023-12-09T01:34:10 sra_accession-sra_project +< 2023-12-16T01:37:57 sra_accession-sra_project togoid-config config/sra_accession-sra_project convert -> 2023-12-09T01:34:15 sra_accession-sra_project +> 2023-12-16T01:38:02 sra_accession-sra_project ### Update TTL for sra_accession-sra_run if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_accession-sra_run.ttl is older than output/tsv/sra_accession-sra_run.tsv ## Convert output/tsv/sra_accession-sra_run.tsv => output/ttl/sra_accession-sra_run.ttl -< 2023-12-09T01:34:15 sra_accession-sra_run +< 2023-12-16T01:38:02 sra_accession-sra_run togoid-config config/sra_accession-sra_run convert -> 2023-12-09T01:39:52 sra_accession-sra_run +> 2023-12-16T01:43:16 sra_accession-sra_run ### Update TTL for sra_accession-sra_sample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_accession-sra_sample.ttl is older than output/tsv/sra_accession-sra_sample.tsv ## Convert output/tsv/sra_accession-sra_sample.tsv => output/ttl/sra_accession-sra_sample.ttl -< 2023-12-09T01:39:52 sra_accession-sra_sample +< 2023-12-16T01:43:17 sra_accession-sra_sample togoid-config config/sra_accession-sra_sample convert -> 2023-12-09T01:44:40 sra_accession-sra_sample +> 2023-12-16T01:48:01 sra_accession-sra_sample ### Update TTL for sra_experiment-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_experiment-bioproject.ttl is older than output/tsv/sra_experiment-bioproject.tsv ## Convert output/tsv/sra_experiment-bioproject.tsv => output/ttl/sra_experiment-bioproject.ttl -< 2023-12-09T01:44:40 sra_experiment-bioproject +< 2023-12-16T01:48:01 sra_experiment-bioproject togoid-config config/sra_experiment-bioproject convert -> 2023-12-09T01:48:32 sra_experiment-bioproject +> 2023-12-16T01:51:54 sra_experiment-bioproject ### Update TTL for sra_experiment-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_experiment-biosample.ttl is older than output/tsv/sra_experiment-biosample.tsv ## Convert output/tsv/sra_experiment-biosample.tsv => output/ttl/sra_experiment-biosample.ttl -< 2023-12-09T01:48:32 sra_experiment-biosample +< 2023-12-16T01:51:54 sra_experiment-biosample togoid-config config/sra_experiment-biosample convert -> 2023-12-09T01:52:48 sra_experiment-biosample +> 2023-12-16T01:56:14 sra_experiment-biosample ### Update TTL for sra_experiment-sra_project if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_experiment-sra_project.ttl is older than output/tsv/sra_experiment-sra_project.tsv ## Convert output/tsv/sra_experiment-sra_project.tsv => output/ttl/sra_experiment-sra_project.ttl -< 2023-12-09T01:52:48 sra_experiment-sra_project +< 2023-12-16T01:56:14 sra_experiment-sra_project togoid-config config/sra_experiment-sra_project convert -> 2023-12-09T01:57:33 sra_experiment-sra_project +> 2023-12-16T02:01:03 sra_experiment-sra_project ### Update TTL for sra_experiment-sra_sample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_experiment-sra_sample.ttl is older than output/tsv/sra_experiment-sra_sample.tsv ## Convert output/tsv/sra_experiment-sra_sample.tsv => output/ttl/sra_experiment-sra_sample.ttl -< 2023-12-09T01:57:33 sra_experiment-sra_sample +< 2023-12-16T02:01:03 sra_experiment-sra_sample togoid-config config/sra_experiment-sra_sample convert -> 2023-12-09T02:01:22 sra_experiment-sra_sample +> 2023-12-16T02:04:58 sra_experiment-sra_sample ### Update TTL for sra_project-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_project-bioproject.ttl is older than output/tsv/sra_project-bioproject.tsv ## Convert output/tsv/sra_project-bioproject.tsv => output/ttl/sra_project-bioproject.ttl -< 2023-12-09T02:01:22 sra_project-bioproject +< 2023-12-16T02:04:58 sra_project-bioproject togoid-config config/sra_project-bioproject convert -> 2023-12-09T02:01:26 sra_project-bioproject +> 2023-12-16T02:05:02 sra_project-bioproject ### Update TTL for sra_run-bioproject if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_run-bioproject.ttl is older than output/tsv/sra_run-bioproject.tsv ## Convert output/tsv/sra_run-bioproject.tsv => output/ttl/sra_run-bioproject.ttl -< 2023-12-09T02:01:26 sra_run-bioproject +< 2023-12-16T02:05:02 sra_run-bioproject togoid-config config/sra_run-bioproject convert -> 2023-12-09T02:05:26 sra_run-bioproject +> 2023-12-16T02:08:51 sra_run-bioproject ### Update TTL for sra_run-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_run-biosample.ttl is older than output/tsv/sra_run-biosample.tsv ## Convert output/tsv/sra_run-biosample.tsv => output/ttl/sra_run-biosample.ttl -< 2023-12-09T02:05:26 sra_run-biosample +< 2023-12-16T02:08:51 sra_run-biosample togoid-config config/sra_run-biosample convert -> 2023-12-09T02:09:38 sra_run-biosample +> 2023-12-16T02:13:00 sra_run-biosample ### Update TTL for sra_run-sra_experiment if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_run-sra_experiment.ttl is older than output/tsv/sra_run-sra_experiment.tsv ## Convert output/tsv/sra_run-sra_experiment.tsv => output/ttl/sra_run-sra_experiment.ttl -< 2023-12-09T02:09:38 sra_run-sra_experiment +< 2023-12-16T02:13:00 sra_run-sra_experiment togoid-config config/sra_run-sra_experiment convert -> 2023-12-09T02:14:24 sra_run-sra_experiment +> 2023-12-16T02:17:59 sra_run-sra_experiment ### Update TTL for sra_run-sra_project if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_run-sra_project.ttl is older than output/tsv/sra_run-sra_project.tsv ## Convert output/tsv/sra_run-sra_project.tsv => output/ttl/sra_run-sra_project.ttl -< 2023-12-09T02:14:24 sra_run-sra_project +< 2023-12-16T02:17:59 sra_run-sra_project togoid-config config/sra_run-sra_project convert -> 2023-12-09T02:18:43 sra_run-sra_project +> 2023-12-16T02:22:22 sra_run-sra_project ### Update TTL for sra_run-sra_sample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_run-sra_sample.ttl is older than output/tsv/sra_run-sra_sample.tsv ## Convert output/tsv/sra_run-sra_sample.tsv => output/ttl/sra_run-sra_sample.ttl -< 2023-12-09T02:18:43 sra_run-sra_sample +< 2023-12-16T02:22:22 sra_run-sra_sample togoid-config config/sra_run-sra_sample convert -> 2023-12-09T02:22:39 sra_run-sra_sample +> 2023-12-16T02:26:20 sra_run-sra_sample ### Update TTL for sra_sample-biosample if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/sra_sample-biosample.ttl is older than output/tsv/sra_sample-biosample.tsv ## Convert output/tsv/sra_sample-biosample.tsv => output/ttl/sra_sample-biosample.ttl -< 2023-12-09T02:22:39 sra_sample-biosample +< 2023-12-16T02:26:20 sra_sample-biosample togoid-config config/sra_sample-biosample convert -> 2023-12-09T02:26:43 sra_sample-biosample +> 2023-12-16T02:30:09 sra_sample-biosample ### Update TTL for swisslipids-chebi if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/swisslipids-chebi.ttl is older than output/tsv/swisslipids-chebi.tsv ## Convert output/tsv/swisslipids-chebi.tsv => output/ttl/swisslipids-chebi.ttl -< 2023-12-09T02:26:43 swisslipids-chebi +< 2023-12-16T02:30:09 swisslipids-chebi togoid-config config/swisslipids-chebi convert -> 2023-12-09T02:26:43 swisslipids-chebi +> 2023-12-16T02:30:09 swisslipids-chebi ### Update TTL for swisslipids-hmdb if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/swisslipids-hmdb.ttl is older than output/tsv/swisslipids-hmdb.tsv ## Convert output/tsv/swisslipids-hmdb.tsv => output/ttl/swisslipids-hmdb.ttl -< 2023-12-09T02:26:43 swisslipids-hmdb +< 2023-12-16T02:30:09 swisslipids-hmdb togoid-config config/swisslipids-hmdb convert -> 2023-12-09T02:26:43 swisslipids-hmdb +> 2023-12-16T02:30:10 swisslipids-hmdb ### Update TTL for swisslipids-inchi_key if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/swisslipids-inchi_key.ttl is older than output/tsv/swisslipids-inchi_key.tsv ## Convert output/tsv/swisslipids-inchi_key.tsv => output/ttl/swisslipids-inchi_key.ttl -< 2023-12-09T02:26:43 swisslipids-inchi_key +< 2023-12-16T02:30:10 swisslipids-inchi_key togoid-config config/swisslipids-inchi_key convert -> 2023-12-09T02:26:49 swisslipids-inchi_key +> 2023-12-16T02:30:15 swisslipids-inchi_key ### Update TTL for taxonomy-pubmed if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/taxonomy-pubmed.ttl is older than output/tsv/taxonomy-pubmed.tsv ## Convert output/tsv/taxonomy-pubmed.tsv => output/ttl/taxonomy-pubmed.ttl -< 2023-12-09T02:26:49 taxonomy-pubmed +< 2023-12-16T02:30:15 taxonomy-pubmed togoid-config config/taxonomy-pubmed convert -> 2023-12-09T02:26:50 taxonomy-pubmed +> 2023-12-16T02:30:16 taxonomy-pubmed ### Update TTL for togovar-clinvar if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/togovar-clinvar.ttl is newer than output/tsv/togovar-clinvar.tsv # => Preserving output/ttl/togovar-clinvar.ttl ### Update TTL for togovar-dbsnp if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/togovar-dbsnp.ttl is older than output/tsv/togovar-dbsnp.tsv ## Convert output/tsv/togovar-dbsnp.tsv => output/ttl/togovar-dbsnp.ttl -< 2023-12-09T02:26:50 togovar-dbsnp +< 2023-12-16T02:30:16 togovar-dbsnp togoid-config config/togovar-dbsnp convert -> 2023-12-09T02:38:41 togovar-dbsnp +> 2023-12-16T02:42:22 togovar-dbsnp ### Update TTL for togovar-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/togovar-ensembl_gene.ttl is older than output/tsv/togovar-ensembl_gene.tsv ## Convert output/tsv/togovar-ensembl_gene.tsv => output/ttl/togovar-ensembl_gene.ttl -< 2023-12-09T02:38:41 togovar-ensembl_gene +< 2023-12-16T02:42:22 togovar-ensembl_gene togoid-config config/togovar-ensembl_gene convert -> 2023-12-09T02:55:35 togovar-ensembl_gene +> 2023-12-16T02:59:27 togovar-ensembl_gene ### Update TTL for togovar-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/togovar-ensembl_transcript.ttl is older than output/tsv/togovar-ensembl_transcript.tsv ## Convert output/tsv/togovar-ensembl_transcript.tsv => output/ttl/togovar-ensembl_transcript.ttl -< 2023-12-09T02:55:35 togovar-ensembl_transcript +< 2023-12-16T02:59:27 togovar-ensembl_transcript togoid-config config/togovar-ensembl_transcript convert -> 2023-12-09T05:29:13 togovar-ensembl_transcript +> 2023-12-16T05:34:13 togovar-ensembl_transcript ### Update TTL for togovar-hgnc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/togovar-hgnc.ttl is older than output/tsv/togovar-hgnc.tsv ## Convert output/tsv/togovar-hgnc.tsv => output/ttl/togovar-hgnc.ttl -< 2023-12-09T05:29:13 togovar-hgnc +< 2023-12-16T05:34:13 togovar-hgnc togoid-config config/togovar-hgnc convert -> 2023-12-09T05:38:22 togovar-hgnc +> 2023-12-16T05:43:51 togovar-hgnc ### Update TTL for togovar-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/togovar-ncbigene.ttl is older than output/tsv/togovar-ncbigene.tsv ## Convert output/tsv/togovar-ncbigene.tsv => output/ttl/togovar-ncbigene.ttl -< 2023-12-09T05:38:22 togovar-ncbigene +< 2023-12-16T05:43:51 togovar-ncbigene togoid-config config/togovar-ncbigene convert -> 2023-12-09T05:47:51 togovar-ncbigene +> 2023-12-16T05:53:12 togovar-ncbigene ### Update TTL for togovar-pubmed if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/togovar-pubmed.ttl is older than output/tsv/togovar-pubmed.tsv ## Convert output/tsv/togovar-pubmed.tsv => output/ttl/togovar-pubmed.ttl -< 2023-12-09T05:47:51 togovar-pubmed +< 2023-12-16T05:53:12 togovar-pubmed togoid-config config/togovar-pubmed convert -> 2023-12-09T05:47:57 togovar-pubmed +> 2023-12-16T05:53:18 togovar-pubmed ### Update TTL for togovar-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/togovar-refseq_rna.ttl is older than output/tsv/togovar-refseq_rna.tsv ## Convert output/tsv/togovar-refseq_rna.tsv => output/ttl/togovar-refseq_rna.ttl -< 2023-12-09T05:47:57 togovar-refseq_rna +< 2023-12-16T05:53:18 togovar-refseq_rna togoid-config config/togovar-refseq_rna convert -> 2023-12-09T06:31:52 togovar-refseq_rna +> 2023-12-16T06:36:11 togovar-refseq_rna ### Update TTL for uberon-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/uberon-ncit_tissue.ttl is older than output/tsv/uberon-ncit_tissue.tsv ## Convert output/tsv/uberon-ncit_tissue.tsv => output/ttl/uberon-ncit_tissue.ttl -< 2023-12-09T06:31:52 uberon-ncit_tissue +< 2023-12-16T06:36:11 uberon-ncit_tissue togoid-config config/uberon-ncit_tissue convert -> 2023-12-09T06:31:53 uberon-ncit_tissue +> 2023-12-16T06:36:11 uberon-ncit_tissue ### Update TTL for uniprot-chembl_target if check_ttl_filesize false or check_ttl_timestamp false # File output/ttl/uniprot-chembl_target.ttl is newer than output/tsv/uniprot-chembl_target.tsv # => Preserving output/ttl/uniprot-chembl_target.ttl @@ -5228,68 +5216,68 @@ togoid-config config/uberon-ncit_tissue convert ### Update TTL for uniprot_reference_proteome-assembly_insdc if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/uniprot_reference_proteome-assembly_insdc.ttl is older than output/tsv/uniprot_reference_proteome-assembly_insdc.tsv ## Convert output/tsv/uniprot_reference_proteome-assembly_insdc.tsv => output/ttl/uniprot_reference_proteome-assembly_insdc.ttl -< 2023-12-09T06:31:53 uniprot_reference_proteome-assembly_insdc +< 2023-12-16T06:36:11 uniprot_reference_proteome-assembly_insdc togoid-config config/uniprot_reference_proteome-assembly_insdc convert -> 2023-12-09T06:31:57 uniprot_reference_proteome-assembly_insdc +> 2023-12-16T06:36:16 uniprot_reference_proteome-assembly_insdc ### Update TTL for uniprot_reference_proteome-assembly_refseq if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/uniprot_reference_proteome-assembly_refseq.ttl is older than output/tsv/uniprot_reference_proteome-assembly_refseq.tsv ## Convert output/tsv/uniprot_reference_proteome-assembly_refseq.tsv => output/ttl/uniprot_reference_proteome-assembly_refseq.ttl -< 2023-12-09T06:31:57 uniprot_reference_proteome-assembly_refseq +< 2023-12-16T06:36:16 uniprot_reference_proteome-assembly_refseq togoid-config config/uniprot_reference_proteome-assembly_refseq convert -> 2023-12-09T06:31:57 uniprot_reference_proteome-assembly_refseq +> 2023-12-16T06:36:16 uniprot_reference_proteome-assembly_refseq ### Update TTL for uniprot_reference_proteome-taxonomy if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/uniprot_reference_proteome-taxonomy.ttl is older than output/tsv/uniprot_reference_proteome-taxonomy.tsv ## Convert output/tsv/uniprot_reference_proteome-taxonomy.tsv => output/ttl/uniprot_reference_proteome-taxonomy.ttl -< 2023-12-09T06:31:57 uniprot_reference_proteome-taxonomy +< 2023-12-16T06:36:16 uniprot_reference_proteome-taxonomy togoid-config config/uniprot_reference_proteome-taxonomy convert -> 2023-12-09T06:32:01 uniprot_reference_proteome-taxonomy +> 2023-12-16T06:36:21 uniprot_reference_proteome-taxonomy ### Update TTL for wikipathways-chebi if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/wikipathways-chebi.ttl is older than output/tsv/wikipathways-chebi.tsv ## Convert output/tsv/wikipathways-chebi.tsv => output/ttl/wikipathways-chebi.ttl -< 2023-12-09T06:32:01 wikipathways-chebi +< 2023-12-16T06:36:21 wikipathways-chebi togoid-config config/wikipathways-chebi convert -> 2023-12-09T06:32:02 wikipathways-chebi +> 2023-12-16T06:36:21 wikipathways-chebi ### Update TTL for wikipathways-doid if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/wikipathways-doid.ttl is older than output/tsv/wikipathways-doid.tsv ## Convert output/tsv/wikipathways-doid.tsv => output/ttl/wikipathways-doid.ttl -< 2023-12-09T06:32:02 wikipathways-doid +< 2023-12-16T06:36:21 wikipathways-doid togoid-config config/wikipathways-doid convert -> 2023-12-09T06:32:02 wikipathways-doid +> 2023-12-16T06:36:21 wikipathways-doid ### Update TTL for wikipathways-hmdb if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/wikipathways-hmdb.ttl is older than output/tsv/wikipathways-hmdb.tsv ## Convert output/tsv/wikipathways-hmdb.tsv => output/ttl/wikipathways-hmdb.ttl -< 2023-12-09T06:32:02 wikipathways-hmdb +< 2023-12-16T06:36:21 wikipathways-hmdb togoid-config config/wikipathways-hmdb convert -> 2023-12-09T06:32:02 wikipathways-hmdb +> 2023-12-16T06:36:22 wikipathways-hmdb ### Update TTL for wikipathways-lipidmaps if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/wikipathways-lipidmaps.ttl is older than output/tsv/wikipathways-lipidmaps.tsv ## Convert output/tsv/wikipathways-lipidmaps.tsv => output/ttl/wikipathways-lipidmaps.ttl -< 2023-12-09T06:32:02 wikipathways-lipidmaps +< 2023-12-16T06:36:22 wikipathways-lipidmaps togoid-config config/wikipathways-lipidmaps convert -> 2023-12-09T06:32:02 wikipathways-lipidmaps +> 2023-12-16T06:36:22 wikipathways-lipidmaps ### Update TTL for wikipathways-ncbigene if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/wikipathways-ncbigene.ttl is older than output/tsv/wikipathways-ncbigene.tsv ## Convert output/tsv/wikipathways-ncbigene.tsv => output/ttl/wikipathways-ncbigene.ttl -< 2023-12-09T06:32:02 wikipathways-ncbigene +< 2023-12-16T06:36:22 wikipathways-ncbigene togoid-config config/wikipathways-ncbigene convert -> 2023-12-09T06:32:03 wikipathways-ncbigene +> 2023-12-16T06:36:22 wikipathways-ncbigene ### Update TTL for wikipathways-uniprot if check_ttl_filesize false or check_ttl_timestamp true # File output/ttl/wikipathways-uniprot.ttl is older than output/tsv/wikipathways-uniprot.tsv ## Convert output/tsv/wikipathways-uniprot.tsv => output/ttl/wikipathways-uniprot.ttl -< 2023-12-09T06:32:03 wikipathways-uniprot +< 2023-12-16T06:36:22 wikipathways-uniprot togoid-config config/wikipathways-uniprot convert -> 2023-12-09T06:32:03 wikipathways-uniprot +> 2023-12-16T06:36:23 wikipathways-uniprot Rule for TTL (output/ttl/bioproject-biosample.ttl) ------------------------------ Investigating output/ttl/bioproject-biosample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:57:10 +0900 +timestamp: 2023-12-15 21:00:09 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/bioproject-biosample.tsv (2023-12-08 17:49:56 +0900) -latest-prerequisite time: 2023-12-08 17:49:56 +0900 +--output/tsv/bioproject-biosample.tsv (2023-12-15 17:51:01 +0900) +latest-prerequisite time: 2023-12-15 17:51:01 +0900 ................................ Rule for TTL (output/ttl/bioproject-geo_series.ttl) @@ -5297,12 +5285,12 @@ Rule for TTL (output/ttl/bioproject-geo_series.ttl) Investigating output/ttl/bioproject-geo_series.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:57:12 +0900 +timestamp: 2023-12-15 21:00:11 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/bioproject-geo_series.tsv (2023-12-08 17:49:58 +0900) -latest-prerequisite time: 2023-12-08 17:49:58 +0900 +--output/tsv/bioproject-geo_series.tsv (2023-12-15 17:51:02 +0900) +latest-prerequisite time: 2023-12-15 17:51:02 +0900 ................................ Rule for TTL (output/ttl/bioproject-pubmed.ttl) @@ -5310,12 +5298,12 @@ Rule for TTL (output/ttl/bioproject-pubmed.ttl) Investigating output/ttl/bioproject-pubmed.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:57:14 +0900 +timestamp: 2023-12-15 21:00:13 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/bioproject-pubmed.tsv (2023-12-08 17:49:59 +0900) -latest-prerequisite time: 2023-12-08 17:49:59 +0900 +--output/tsv/bioproject-pubmed.tsv (2023-12-15 17:51:03 +0900) +latest-prerequisite time: 2023-12-15 17:51:03 +0900 ................................ Rule for TTL (output/ttl/bioproject_umbrella-bioproject.ttl) @@ -5323,12 +5311,12 @@ Rule for TTL (output/ttl/bioproject_umbrella-bioproject.ttl) Investigating output/ttl/bioproject_umbrella-bioproject.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:57:15 +0900 +timestamp: 2023-12-15 21:00:14 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/bioproject_umbrella-bioproject.tsv (2023-12-08 17:49:59 +0900) -latest-prerequisite time: 2023-12-08 17:49:59 +0900 +--output/tsv/bioproject_umbrella-bioproject.tsv (2023-12-15 17:51:04 +0900) +latest-prerequisite time: 2023-12-15 17:51:04 +0900 ................................ Rule for TTL (output/ttl/cellosaurus-ncit_disease.ttl) @@ -5401,12 +5389,12 @@ Rule for TTL (output/ttl/ensembl_gene-affy_probeset.ttl) Investigating output/ttl/ensembl_gene-affy_probeset.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 20:59:09 +0900 +timestamp: 2023-12-15 21:02:12 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_gene-affy_probeset.tsv (2023-12-08 18:07:13 +0900) -latest-prerequisite time: 2023-12-08 18:07:13 +0900 +--output/tsv/ensembl_gene-affy_probeset.tsv (2023-12-15 18:08:34 +0900) +latest-prerequisite time: 2023-12-15 18:08:34 +0900 ................................ Rule for TTL (output/ttl/ensembl_gene-ensembl_protein.ttl) @@ -5414,12 +5402,12 @@ Rule for TTL (output/ttl/ensembl_gene-ensembl_protein.ttl) Investigating output/ttl/ensembl_gene-ensembl_protein.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:01:00 +0900 +timestamp: 2023-12-15 21:04:02 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_gene-ensembl_protein.tsv (2023-12-08 18:09:10 +0900) -latest-prerequisite time: 2023-12-08 18:09:10 +0900 +--output/tsv/ensembl_gene-ensembl_protein.tsv (2023-12-15 18:10:34 +0900) +latest-prerequisite time: 2023-12-15 18:10:34 +0900 ................................ Rule for TTL (output/ttl/ensembl_gene-ensembl_transcript.ttl) @@ -5427,12 +5415,12 @@ Rule for TTL (output/ttl/ensembl_gene-ensembl_transcript.ttl) Investigating output/ttl/ensembl_gene-ensembl_transcript.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:03:19 +0900 +timestamp: 2023-12-15 21:06:18 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_gene-ensembl_transcript.tsv (2023-12-08 18:11:15 +0900) -latest-prerequisite time: 2023-12-08 18:11:15 +0900 +--output/tsv/ensembl_gene-ensembl_transcript.tsv (2023-12-15 18:13:04 +0900) +latest-prerequisite time: 2023-12-15 18:13:04 +0900 ................................ Rule for TTL (output/ttl/ensembl_gene-hgnc.ttl) @@ -5440,12 +5428,12 @@ Rule for TTL (output/ttl/ensembl_gene-hgnc.ttl) Investigating output/ttl/ensembl_gene-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:03:21 +0900 +timestamp: 2023-12-15 21:06:20 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_gene-hgnc.tsv (2023-12-08 18:11:15 +0900) -latest-prerequisite time: 2023-12-08 18:11:15 +0900 +--output/tsv/ensembl_gene-hgnc.tsv (2023-12-15 18:13:04 +0900) +latest-prerequisite time: 2023-12-15 18:13:04 +0900 ................................ Rule for TTL (output/ttl/ensembl_gene-ncbigene.ttl) @@ -5453,12 +5441,12 @@ Rule for TTL (output/ttl/ensembl_gene-ncbigene.ttl) Investigating output/ttl/ensembl_gene-ncbigene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:04:12 +0900 +timestamp: 2023-12-15 21:07:09 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_gene-ncbigene.tsv (2023-12-08 18:12:42 +0900) -latest-prerequisite time: 2023-12-08 18:12:42 +0900 +--output/tsv/ensembl_gene-ncbigene.tsv (2023-12-15 18:14:28 +0900) +latest-prerequisite time: 2023-12-15 18:14:28 +0900 ................................ Rule for TTL (output/ttl/ensembl_gene-uniprot.ttl) @@ -5466,12 +5454,12 @@ Rule for TTL (output/ttl/ensembl_gene-uniprot.ttl) Investigating output/ttl/ensembl_gene-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:04:54 +0900 +timestamp: 2023-12-15 21:07:53 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_gene-uniprot.tsv (2023-12-08 18:14:04 +0900) -latest-prerequisite time: 2023-12-08 18:14:04 +0900 +--output/tsv/ensembl_gene-uniprot.tsv (2023-12-15 18:15:49 +0900) +latest-prerequisite time: 2023-12-15 18:15:49 +0900 ................................ Rule for TTL (output/ttl/ensembl_protein-ensembl_transcript.ttl) @@ -5479,12 +5467,12 @@ Rule for TTL (output/ttl/ensembl_protein-ensembl_transcript.ttl) Investigating output/ttl/ensembl_protein-ensembl_transcript.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:06:48 +0900 +timestamp: 2023-12-15 21:09:45 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_protein-ensembl_transcript.tsv (2023-12-08 18:15:56 +0900) -latest-prerequisite time: 2023-12-08 18:15:56 +0900 +--output/tsv/ensembl_protein-ensembl_transcript.tsv (2023-12-15 18:17:40 +0900) +latest-prerequisite time: 2023-12-15 18:17:40 +0900 ................................ Rule for TTL (output/ttl/ensembl_transcript-affy_probeset.ttl) @@ -5492,12 +5480,12 @@ Rule for TTL (output/ttl/ensembl_transcript-affy_probeset.ttl) Investigating output/ttl/ensembl_transcript-affy_probeset.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:06:50 +0900 +timestamp: 2023-12-15 21:09:47 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_transcript-affy_probeset.tsv (2023-12-08 18:16:34 +0900) -latest-prerequisite time: 2023-12-08 18:16:34 +0900 +--output/tsv/ensembl_transcript-affy_probeset.tsv (2023-12-15 18:18:47 +0900) +latest-prerequisite time: 2023-12-15 18:18:47 +0900 ................................ Rule for TTL (output/ttl/ensembl_transcript-go.ttl) @@ -5505,12 +5493,12 @@ Rule for TTL (output/ttl/ensembl_transcript-go.ttl) Investigating output/ttl/ensembl_transcript-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:17:46 +0900 +timestamp: 2023-12-15 21:20:39 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_transcript-go.tsv (2023-12-08 18:20:30 +0900) -latest-prerequisite time: 2023-12-08 18:20:30 +0900 +--output/tsv/ensembl_transcript-go.tsv (2023-12-15 18:22:41 +0900) +latest-prerequisite time: 2023-12-15 18:22:41 +0900 ................................ Rule for TTL (output/ttl/ensembl_transcript-hgnc.ttl) @@ -5518,12 +5506,12 @@ Rule for TTL (output/ttl/ensembl_transcript-hgnc.ttl) Investigating output/ttl/ensembl_transcript-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:17:49 +0900 +timestamp: 2023-12-15 21:20:42 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_transcript-hgnc.tsv (2023-12-08 18:20:30 +0900) -latest-prerequisite time: 2023-12-08 18:20:30 +0900 +--output/tsv/ensembl_transcript-hgnc.tsv (2023-12-15 18:22:42 +0900) +latest-prerequisite time: 2023-12-15 18:22:42 +0900 ................................ Rule for TTL (output/ttl/ensembl_transcript-refseq_rna.ttl) @@ -5531,12 +5519,12 @@ Rule for TTL (output/ttl/ensembl_transcript-refseq_rna.ttl) Investigating output/ttl/ensembl_transcript-refseq_rna.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 21:19:14 +0900 +timestamp: 2023-12-15 21:22:07 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ensembl_transcript-refseq_rna.tsv (2023-12-08 18:22:08 +0900) -latest-prerequisite time: 2023-12-08 18:22:08 +0900 +--output/tsv/ensembl_transcript-refseq_rna.tsv (2023-12-15 18:24:17 +0900) +latest-prerequisite time: 2023-12-15 18:24:17 +0900 ................................ Rule for TTL (output/ttl/hmdb-chebi.ttl) @@ -5739,12 +5727,12 @@ Rule for TTL (output/ttl/mgi_gene-ensembl_gene.ttl) Investigating output/ttl/mgi_gene-ensembl_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:02 +0900 +timestamp: 2023-12-15 23:01:03 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_gene-ensembl_gene.tsv (2023-12-08 19:04:14 +0900) -latest-prerequisite time: 2023-12-08 19:04:14 +0900 +--output/tsv/mgi_gene-ensembl_gene.tsv (2023-12-15 19:06:29 +0900) +latest-prerequisite time: 2023-12-15 19:06:29 +0900 ................................ Rule for TTL (output/ttl/mgi_gene-hgnc.ttl) @@ -5752,12 +5740,12 @@ Rule for TTL (output/ttl/mgi_gene-hgnc.ttl) Investigating output/ttl/mgi_gene-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:02 +0900 +timestamp: 2023-12-15 23:01:03 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_gene-hgnc.tsv (2023-12-08 19:04:15 +0900) -latest-prerequisite time: 2023-12-08 19:04:15 +0900 +--output/tsv/mgi_gene-hgnc.tsv (2023-12-15 19:06:29 +0900) +latest-prerequisite time: 2023-12-15 19:06:29 +0900 ................................ Rule for TTL (output/ttl/mgi_gene-mgi_allele.ttl) @@ -5765,12 +5753,12 @@ Rule for TTL (output/ttl/mgi_gene-mgi_allele.ttl) Investigating output/ttl/mgi_gene-mgi_allele.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:03 +0900 +timestamp: 2023-12-15 23:01:04 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_gene-mgi_allele.tsv (2023-12-08 19:04:16 +0900) -latest-prerequisite time: 2023-12-08 19:04:16 +0900 +--output/tsv/mgi_gene-mgi_allele.tsv (2023-12-15 19:06:31 +0900) +latest-prerequisite time: 2023-12-15 19:06:31 +0900 ................................ Rule for TTL (output/ttl/mgi_gene-ncbigene.ttl) @@ -5778,12 +5766,12 @@ Rule for TTL (output/ttl/mgi_gene-ncbigene.ttl) Investigating output/ttl/mgi_gene-ncbigene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:04 +0900 +timestamp: 2023-12-15 23:01:05 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_gene-ncbigene.tsv (2023-12-08 19:04:17 +0900) -latest-prerequisite time: 2023-12-08 19:04:17 +0900 +--output/tsv/mgi_gene-ncbigene.tsv (2023-12-15 19:06:31 +0900) +latest-prerequisite time: 2023-12-15 19:06:31 +0900 ................................ Rule for TTL (output/ttl/mgi_gene-uniprot.ttl) @@ -5791,12 +5779,12 @@ Rule for TTL (output/ttl/mgi_gene-uniprot.ttl) Investigating output/ttl/mgi_gene-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:05 +0900 +timestamp: 2023-12-15 23:01:05 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_gene-uniprot.tsv (2023-12-08 19:04:17 +0900) -latest-prerequisite time: 2023-12-08 19:04:17 +0900 +--output/tsv/mgi_gene-uniprot.tsv (2023-12-15 19:06:31 +0900) +latest-prerequisite time: 2023-12-15 19:06:31 +0900 ................................ Rule for TTL (output/ttl/mgi_genotype-doid.ttl) @@ -5804,12 +5792,12 @@ Rule for TTL (output/ttl/mgi_genotype-doid.ttl) Investigating output/ttl/mgi_genotype-doid.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:05 +0900 +timestamp: 2023-12-15 23:01:06 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_genotype-doid.tsv (2023-12-08 19:04:20 +0900) -latest-prerequisite time: 2023-12-08 19:04:20 +0900 +--output/tsv/mgi_genotype-doid.tsv (2023-12-15 19:06:35 +0900) +latest-prerequisite time: 2023-12-15 19:06:35 +0900 ................................ Rule for TTL (output/ttl/mgi_genotype-mgi_allele.ttl) @@ -5817,12 +5805,12 @@ Rule for TTL (output/ttl/mgi_genotype-mgi_allele.ttl) Investigating output/ttl/mgi_genotype-mgi_allele.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:06 +0900 +timestamp: 2023-12-15 23:01:07 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_genotype-mgi_allele.tsv (2023-12-08 19:04:22 +0900) -latest-prerequisite time: 2023-12-08 19:04:22 +0900 +--output/tsv/mgi_genotype-mgi_allele.tsv (2023-12-15 19:06:36 +0900) +latest-prerequisite time: 2023-12-15 19:06:36 +0900 ................................ Rule for TTL (output/ttl/mgi_genotype-mp.ttl) @@ -5830,12 +5818,12 @@ Rule for TTL (output/ttl/mgi_genotype-mp.ttl) Investigating output/ttl/mgi_genotype-mp.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 22:59:09 +0900 +timestamp: 2023-12-15 23:01:10 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/mgi_genotype-mp.tsv (2023-12-08 19:04:24 +0900) -latest-prerequisite time: 2023-12-08 19:04:24 +0900 +--output/tsv/mgi_genotype-mp.tsv (2023-12-15 19:06:38 +0900) +latest-prerequisite time: 2023-12-15 19:06:38 +0900 ................................ Rule for TTL (output/ttl/ncbigene-ensembl_gene.ttl) @@ -5843,12 +5831,12 @@ Rule for TTL (output/ttl/ncbigene-ensembl_gene.ttl) Investigating output/ttl/ncbigene-ensembl_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:00:29 +0900 +timestamp: 2023-12-15 23:02:29 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-ensembl_gene.tsv (2023-12-08 19:04:56 +0900) -latest-prerequisite time: 2023-12-08 19:04:56 +0900 +--output/tsv/ncbigene-ensembl_gene.tsv (2023-12-15 19:07:09 +0900) +latest-prerequisite time: 2023-12-15 19:07:09 +0900 ................................ Rule for TTL (output/ttl/ncbigene-ensembl_protein.ttl) @@ -5856,12 +5844,12 @@ Rule for TTL (output/ttl/ncbigene-ensembl_protein.ttl) Investigating output/ttl/ncbigene-ensembl_protein.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:01:59 +0900 +timestamp: 2023-12-15 23:03:58 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-ensembl_protein.tsv (2023-12-08 19:05:54 +0900) -latest-prerequisite time: 2023-12-08 19:05:54 +0900 +--output/tsv/ncbigene-ensembl_protein.tsv (2023-12-15 19:08:03 +0900) +latest-prerequisite time: 2023-12-15 19:08:03 +0900 ................................ Rule for TTL (output/ttl/ncbigene-ensembl_transcript.ttl) @@ -5869,12 +5857,12 @@ Rule for TTL (output/ttl/ncbigene-ensembl_transcript.ttl) Investigating output/ttl/ncbigene-ensembl_transcript.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:03:33 +0900 +timestamp: 2023-12-15 23:05:36 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-ensembl_transcript.tsv (2023-12-08 19:06:43 +0900) -latest-prerequisite time: 2023-12-08 19:06:43 +0900 +--output/tsv/ncbigene-ensembl_transcript.tsv (2023-12-15 19:08:59 +0900) +latest-prerequisite time: 2023-12-15 19:08:59 +0900 ................................ Rule for TTL (output/ttl/ncbigene-flybase_gene.ttl) @@ -5882,12 +5870,12 @@ Rule for TTL (output/ttl/ncbigene-flybase_gene.ttl) Investigating output/ttl/ncbigene-flybase_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:03:34 +0900 +timestamp: 2023-12-15 23:05:36 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-flybase_gene.tsv (2023-12-08 19:07:56 +0900) -latest-prerequisite time: 2023-12-08 19:07:56 +0900 +--output/tsv/ncbigene-flybase_gene.tsv (2023-12-15 19:10:15 +0900) +latest-prerequisite time: 2023-12-15 19:10:15 +0900 ................................ Rule for TTL (output/ttl/ncbigene-go.ttl) @@ -5895,12 +5883,12 @@ Rule for TTL (output/ttl/ncbigene-go.ttl) Investigating output/ttl/ncbigene-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:12:20 +0900 +timestamp: 2023-12-15 23:16:08 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-go.tsv (2023-12-08 19:10:51 +0900) -latest-prerequisite time: 2023-12-08 19:10:51 +0900 +--output/tsv/ncbigene-go.tsv (2023-12-15 19:13:29 +0900) +latest-prerequisite time: 2023-12-15 19:13:29 +0900 ................................ Rule for TTL (output/ttl/ncbigene-hgnc.ttl) @@ -5908,12 +5896,12 @@ Rule for TTL (output/ttl/ncbigene-hgnc.ttl) Investigating output/ttl/ncbigene-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:12:23 +0900 +timestamp: 2023-12-15 23:16:10 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-hgnc.tsv (2023-12-08 19:10:52 +0900) -latest-prerequisite time: 2023-12-08 19:10:52 +0900 +--output/tsv/ncbigene-hgnc.tsv (2023-12-15 19:13:29 +0900) +latest-prerequisite time: 2023-12-15 19:13:29 +0900 ................................ Rule for TTL (output/ttl/ncbigene-mgi_gene.ttl) @@ -5921,12 +5909,12 @@ Rule for TTL (output/ttl/ncbigene-mgi_gene.ttl) Investigating output/ttl/ncbigene-mgi_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:12:24 +0900 +timestamp: 2023-12-15 23:16:11 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-mgi_gene.tsv (2023-12-08 19:11:47 +0900) -latest-prerequisite time: 2023-12-08 19:11:47 +0900 +--output/tsv/ncbigene-mgi_gene.tsv (2023-12-15 19:14:25 +0900) +latest-prerequisite time: 2023-12-15 19:14:25 +0900 ................................ Rule for TTL (output/ttl/ncbigene-mirbase.ttl) @@ -5934,12 +5922,12 @@ Rule for TTL (output/ttl/ncbigene-mirbase.ttl) Investigating output/ttl/ncbigene-mirbase.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:12:24 +0900 +timestamp: 2023-12-15 23:16:11 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-mirbase.tsv (2023-12-08 19:13:21 +0900) -latest-prerequisite time: 2023-12-08 19:13:21 +0900 +--output/tsv/ncbigene-mirbase.tsv (2023-12-15 19:15:58 +0900) +latest-prerequisite time: 2023-12-15 19:15:58 +0900 ................................ Rule for TTL (output/ttl/ncbigene-omim_gene.ttl) @@ -5947,12 +5935,12 @@ Rule for TTL (output/ttl/ncbigene-omim_gene.ttl) Investigating output/ttl/ncbigene-omim_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:12:25 +0900 +timestamp: 2023-12-15 23:16:12 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-omim_gene.tsv (2023-12-08 19:13:22 +0900) -latest-prerequisite time: 2023-12-08 19:13:22 +0900 +--output/tsv/ncbigene-omim_gene.tsv (2023-12-15 19:15:59 +0900) +latest-prerequisite time: 2023-12-15 19:15:59 +0900 ................................ Rule for TTL (output/ttl/ncbigene-refseq_genomic.ttl) @@ -5960,12 +5948,12 @@ Rule for TTL (output/ttl/ncbigene-refseq_genomic.ttl) Investigating output/ttl/ncbigene-refseq_genomic.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:12:26 +0900 +timestamp: 2023-12-15 23:16:13 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-refseq_genomic.tsv (2023-12-08 19:17:09 +0900) -latest-prerequisite time: 2023-12-08 19:17:09 +0900 +--output/tsv/ncbigene-refseq_genomic.tsv (2023-12-15 19:19:49 +0900) +latest-prerequisite time: 2023-12-15 19:19:49 +0900 ................................ Rule for TTL (output/ttl/ncbigene-refseq_protein.ttl) @@ -5973,12 +5961,12 @@ Rule for TTL (output/ttl/ncbigene-refseq_protein.ttl) Investigating output/ttl/ncbigene-refseq_protein.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:23:31 +0900 +timestamp: 2023-12-15 23:27:20 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-refseq_protein.tsv (2023-12-08 19:21:19 +0900) -latest-prerequisite time: 2023-12-08 19:21:19 +0900 +--output/tsv/ncbigene-refseq_protein.tsv (2023-12-15 19:23:59 +0900) +latest-prerequisite time: 2023-12-15 19:23:59 +0900 ................................ Rule for TTL (output/ttl/ncbigene-refseq_rna.ttl) @@ -5986,12 +5974,12 @@ Rule for TTL (output/ttl/ncbigene-refseq_rna.ttl) Investigating output/ttl/ncbigene-refseq_rna.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:33:03 +0900 +timestamp: 2023-12-15 23:36:47 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-refseq_rna.tsv (2023-12-08 19:25:00 +0900) -latest-prerequisite time: 2023-12-08 19:25:00 +0900 +--output/tsv/ncbigene-refseq_rna.tsv (2023-12-15 19:27:37 +0900) +latest-prerequisite time: 2023-12-15 19:27:37 +0900 ................................ Rule for TTL (output/ttl/ncbigene-rgd.ttl) @@ -5999,12 +5987,12 @@ Rule for TTL (output/ttl/ncbigene-rgd.ttl) Investigating output/ttl/ncbigene-rgd.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:33:05 +0900 +timestamp: 2023-12-15 23:36:49 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-rgd.tsv (2023-12-08 19:25:56 +0900) -latest-prerequisite time: 2023-12-08 19:25:56 +0900 +--output/tsv/ncbigene-rgd.tsv (2023-12-15 19:28:32 +0900) +latest-prerequisite time: 2023-12-15 19:28:32 +0900 ................................ Rule for TTL (output/ttl/ncbigene-sgd.ttl) @@ -6012,12 +6000,12 @@ Rule for TTL (output/ttl/ncbigene-sgd.ttl) Investigating output/ttl/ncbigene-sgd.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:33:06 +0900 +timestamp: 2023-12-15 23:36:49 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-sgd.tsv (2023-12-08 19:27:00 +0900) -latest-prerequisite time: 2023-12-08 19:27:00 +0900 +--output/tsv/ncbigene-sgd.tsv (2023-12-15 19:29:37 +0900) +latest-prerequisite time: 2023-12-15 19:29:37 +0900 ................................ Rule for TTL (output/ttl/ncbigene-tair.ttl) @@ -6025,12 +6013,12 @@ Rule for TTL (output/ttl/ncbigene-tair.ttl) Investigating output/ttl/ncbigene-tair.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:33:06 +0900 +timestamp: 2023-12-15 23:36:50 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-tair.tsv (2023-12-08 19:28:04 +0900) -latest-prerequisite time: 2023-12-08 19:28:04 +0900 +--output/tsv/ncbigene-tair.tsv (2023-12-15 19:30:43 +0900) +latest-prerequisite time: 2023-12-15 19:30:43 +0900 ................................ Rule for TTL (output/ttl/ncbigene-taxonomy.ttl) @@ -6038,12 +6026,12 @@ Rule for TTL (output/ttl/ncbigene-taxonomy.ttl) Investigating output/ttl/ncbigene-taxonomy.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:40:24 +0900 +timestamp: 2023-12-15 23:44:22 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-taxonomy.tsv (2023-12-08 19:28:46 +0900) -latest-prerequisite time: 2023-12-08 19:28:46 +0900 +--output/tsv/ncbigene-taxonomy.tsv (2023-12-15 19:31:28 +0900) +latest-prerequisite time: 2023-12-15 19:31:28 +0900 ................................ Rule for TTL (output/ttl/ncbigene-vgnc.ttl) @@ -6051,12 +6039,12 @@ Rule for TTL (output/ttl/ncbigene-vgnc.ttl) Investigating output/ttl/ncbigene-vgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:40:27 +0900 +timestamp: 2023-12-15 23:44:26 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-vgnc.tsv (2023-12-08 19:29:51 +0900) -latest-prerequisite time: 2023-12-08 19:29:51 +0900 +--output/tsv/ncbigene-vgnc.tsv (2023-12-15 19:32:32 +0900) +latest-prerequisite time: 2023-12-15 19:32:32 +0900 ................................ Rule for TTL (output/ttl/ncbigene-wormbase_gene.ttl) @@ -6064,12 +6052,12 @@ Rule for TTL (output/ttl/ncbigene-wormbase_gene.ttl) Investigating output/ttl/ncbigene-wormbase_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:40:27 +0900 +timestamp: 2023-12-15 23:44:26 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-wormbase_gene.tsv (2023-12-08 19:30:55 +0900) -latest-prerequisite time: 2023-12-08 19:30:55 +0900 +--output/tsv/ncbigene-wormbase_gene.tsv (2023-12-15 19:33:37 +0900) +latest-prerequisite time: 2023-12-15 19:33:37 +0900 ................................ Rule for TTL (output/ttl/ncbigene-xenbase_gene.ttl) @@ -6077,12 +6065,12 @@ Rule for TTL (output/ttl/ncbigene-xenbase_gene.ttl) Investigating output/ttl/ncbigene-xenbase_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:40:28 +0900 +timestamp: 2023-12-15 23:44:27 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-xenbase_gene.tsv (2023-12-08 19:31:59 +0900) -latest-prerequisite time: 2023-12-08 19:31:59 +0900 +--output/tsv/ncbigene-xenbase_gene.tsv (2023-12-15 19:34:41 +0900) +latest-prerequisite time: 2023-12-15 19:34:41 +0900 ................................ Rule for TTL (output/ttl/ncbigene-zfin_gene.ttl) @@ -6090,12 +6078,12 @@ Rule for TTL (output/ttl/ncbigene-zfin_gene.ttl) Investigating output/ttl/ncbigene-zfin_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-08 23:40:28 +0900 +timestamp: 2023-12-15 23:44:27 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/ncbigene-zfin_gene.tsv (2023-12-08 19:33:03 +0900) -latest-prerequisite time: 2023-12-08 19:33:03 +0900 +--output/tsv/ncbigene-zfin_gene.tsv (2023-12-15 19:35:46 +0900) +latest-prerequisite time: 2023-12-15 19:35:46 +0900 ................................ Rule for TTL (output/ttl/oma_protein-ensembl_gene.ttl) @@ -6181,12 +6169,12 @@ Rule for TTL (output/ttl/reactome_pathway-chebi.ttl) Investigating output/ttl/reactome_pathway-chebi.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:19 +0900 +timestamp: 2023-12-16 00:25:08 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_pathway-chebi.tsv (2023-12-08 19:40:24 +0900) -latest-prerequisite time: 2023-12-08 19:40:24 +0900 +--output/tsv/reactome_pathway-chebi.tsv (2023-12-15 19:44:44 +0900) +latest-prerequisite time: 2023-12-15 19:44:44 +0900 ................................ Rule for TTL (output/ttl/reactome_pathway-go.ttl) @@ -6194,12 +6182,12 @@ Rule for TTL (output/ttl/reactome_pathway-go.ttl) Investigating output/ttl/reactome_pathway-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:19 +0900 +timestamp: 2023-12-16 00:25:08 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_pathway-go.tsv (2023-12-08 19:40:25 +0900) -latest-prerequisite time: 2023-12-08 19:40:25 +0900 +--output/tsv/reactome_pathway-go.tsv (2023-12-15 19:44:44 +0900) +latest-prerequisite time: 2023-12-15 19:44:44 +0900 ................................ Rule for TTL (output/ttl/reactome_pathway-iuphar_ligand.ttl) @@ -6207,12 +6195,12 @@ Rule for TTL (output/ttl/reactome_pathway-iuphar_ligand.ttl) Investigating output/ttl/reactome_pathway-iuphar_ligand.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:20 +0900 +timestamp: 2023-12-16 00:25:09 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_pathway-iuphar_ligand.tsv (2023-12-08 19:40:25 +0900) -latest-prerequisite time: 2023-12-08 19:40:25 +0900 +--output/tsv/reactome_pathway-iuphar_ligand.tsv (2023-12-15 19:44:45 +0900) +latest-prerequisite time: 2023-12-15 19:44:45 +0900 ................................ Rule for TTL (output/ttl/reactome_pathway-mirbase.ttl) @@ -6220,12 +6208,12 @@ Rule for TTL (output/ttl/reactome_pathway-mirbase.ttl) Investigating output/ttl/reactome_pathway-mirbase.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:20 +0900 +timestamp: 2023-12-16 00:25:09 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_pathway-mirbase.tsv (2023-12-08 19:40:25 +0900) -latest-prerequisite time: 2023-12-08 19:40:25 +0900 +--output/tsv/reactome_pathway-mirbase.tsv (2023-12-15 19:44:45 +0900) +latest-prerequisite time: 2023-12-15 19:44:45 +0900 ................................ Rule for TTL (output/ttl/reactome_pathway-reactome_reaction.ttl) @@ -6233,12 +6221,12 @@ Rule for TTL (output/ttl/reactome_pathway-reactome_reaction.ttl) Investigating output/ttl/reactome_pathway-reactome_reaction.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:23 +0900 +timestamp: 2023-12-16 00:25:12 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_pathway-reactome_reaction.tsv (2023-12-08 19:40:27 +0900) -latest-prerequisite time: 2023-12-08 19:40:27 +0900 +--output/tsv/reactome_pathway-reactome_reaction.tsv (2023-12-15 19:44:46 +0900) +latest-prerequisite time: 2023-12-15 19:44:46 +0900 ................................ Rule for TTL (output/ttl/reactome_pathway-uniprot.ttl) @@ -6246,12 +6234,12 @@ Rule for TTL (output/ttl/reactome_pathway-uniprot.ttl) Investigating output/ttl/reactome_pathway-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:30 +0900 +timestamp: 2023-12-16 00:25:19 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_pathway-uniprot.tsv (2023-12-08 19:40:28 +0900) -latest-prerequisite time: 2023-12-08 19:40:28 +0900 +--output/tsv/reactome_pathway-uniprot.tsv (2023-12-15 19:44:48 +0900) +latest-prerequisite time: 2023-12-15 19:44:48 +0900 ................................ Rule for TTL (output/ttl/reactome_reaction-chebi.ttl) @@ -6259,12 +6247,12 @@ Rule for TTL (output/ttl/reactome_reaction-chebi.ttl) Investigating output/ttl/reactome_reaction-chebi.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:32 +0900 +timestamp: 2023-12-16 00:25:20 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_reaction-chebi.tsv (2023-12-08 19:40:29 +0900) -latest-prerequisite time: 2023-12-08 19:40:29 +0900 +--output/tsv/reactome_reaction-chebi.tsv (2023-12-15 19:44:49 +0900) +latest-prerequisite time: 2023-12-15 19:44:49 +0900 ................................ Rule for TTL (output/ttl/reactome_reaction-go.ttl) @@ -6272,12 +6260,12 @@ Rule for TTL (output/ttl/reactome_reaction-go.ttl) Investigating output/ttl/reactome_reaction-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:33 +0900 +timestamp: 2023-12-16 00:25:21 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_reaction-go.tsv (2023-12-08 19:40:29 +0900) -latest-prerequisite time: 2023-12-08 19:40:29 +0900 +--output/tsv/reactome_reaction-go.tsv (2023-12-15 19:44:49 +0900) +latest-prerequisite time: 2023-12-15 19:44:49 +0900 ................................ Rule for TTL (output/ttl/reactome_reaction-iuphar_ligand.ttl) @@ -6285,12 +6273,12 @@ Rule for TTL (output/ttl/reactome_reaction-iuphar_ligand.ttl) Investigating output/ttl/reactome_reaction-iuphar_ligand.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:33 +0900 +timestamp: 2023-12-16 00:25:21 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_reaction-iuphar_ligand.tsv (2023-12-08 19:40:29 +0900) -latest-prerequisite time: 2023-12-08 19:40:29 +0900 +--output/tsv/reactome_reaction-iuphar_ligand.tsv (2023-12-15 19:44:49 +0900) +latest-prerequisite time: 2023-12-15 19:44:49 +0900 ................................ Rule for TTL (output/ttl/reactome_reaction-mirbase.ttl) @@ -6298,12 +6286,12 @@ Rule for TTL (output/ttl/reactome_reaction-mirbase.ttl) Investigating output/ttl/reactome_reaction-mirbase.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:33 +0900 +timestamp: 2023-12-16 00:25:21 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_reaction-mirbase.tsv (2023-12-08 19:40:29 +0900) -latest-prerequisite time: 2023-12-08 19:40:29 +0900 +--output/tsv/reactome_reaction-mirbase.tsv (2023-12-15 19:44:49 +0900) +latest-prerequisite time: 2023-12-15 19:44:49 +0900 ................................ Rule for TTL (output/ttl/reactome_reaction-uniprot.ttl) @@ -6311,12 +6299,12 @@ Rule for TTL (output/ttl/reactome_reaction-uniprot.ttl) Investigating output/ttl/reactome_reaction-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 00:21:39 +0900 +timestamp: 2023-12-16 00:25:26 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/reactome_reaction-uniprot.tsv (2023-12-08 19:40:30 +0900) -latest-prerequisite time: 2023-12-08 19:40:30 +0900 +--output/tsv/reactome_reaction-uniprot.tsv (2023-12-15 19:44:51 +0900) +latest-prerequisite time: 2023-12-15 19:44:51 +0900 ................................ Rule for TTL (output/ttl/refseq_protein-uniprot.ttl) @@ -6324,12 +6312,12 @@ Rule for TTL (output/ttl/refseq_protein-uniprot.ttl) Investigating output/ttl/refseq_protein-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:24:25 +0900 +timestamp: 2023-12-16 01:28:07 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/refseq_protein-uniprot.tsv (2023-12-08 19:48:21 +0900) -latest-prerequisite time: 2023-12-08 19:48:21 +0900 +--output/tsv/refseq_protein-uniprot.tsv (2023-12-15 19:51:18 +0900) +latest-prerequisite time: 2023-12-15 19:51:18 +0900 ................................ Rule for TTL (output/ttl/refseq_rna-dbsnp.ttl) @@ -6506,12 +6494,12 @@ Rule for TTL (output/ttl/sra_accession-bioproject.ttl) Investigating output/ttl/sra_accession-bioproject.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:24:40 +0900 +timestamp: 2023-12-16 01:28:15 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_accession-bioproject.tsv (2023-12-08 19:49:48 +0900) -latest-prerequisite time: 2023-12-08 19:49:48 +0900 +--output/tsv/sra_accession-bioproject.tsv (2023-12-15 19:53:02 +0900) +latest-prerequisite time: 2023-12-15 19:53:02 +0900 ................................ Rule for TTL (output/ttl/sra_accession-biosample.ttl) @@ -6519,12 +6507,12 @@ Rule for TTL (output/ttl/sra_accession-biosample.ttl) Investigating output/ttl/sra_accession-biosample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:29:23 +0900 +timestamp: 2023-12-16 01:33:08 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_accession-biosample.tsv (2023-12-08 19:56:29 +0900) -latest-prerequisite time: 2023-12-08 19:56:29 +0900 +--output/tsv/sra_accession-biosample.tsv (2023-12-15 19:59:44 +0900) +latest-prerequisite time: 2023-12-15 19:59:44 +0900 ................................ Rule for TTL (output/ttl/sra_accession-sra_analysis.ttl) @@ -6532,12 +6520,12 @@ Rule for TTL (output/ttl/sra_accession-sra_analysis.ttl) Investigating output/ttl/sra_accession-sra_analysis.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:29:27 +0900 +timestamp: 2023-12-16 01:33:13 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_accession-sra_analysis.tsv (2023-12-08 19:57:27 +0900) -latest-prerequisite time: 2023-12-08 19:57:27 +0900 +--output/tsv/sra_accession-sra_analysis.tsv (2023-12-15 20:00:43 +0900) +latest-prerequisite time: 2023-12-15 20:00:43 +0900 ................................ Rule for TTL (output/ttl/sra_accession-sra_experiment.ttl) @@ -6545,12 +6533,12 @@ Rule for TTL (output/ttl/sra_accession-sra_experiment.ttl) Investigating output/ttl/sra_accession-sra_experiment.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:34:09 +0900 +timestamp: 2023-12-16 01:37:55 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_accession-sra_experiment.tsv (2023-12-08 20:03:24 +0900) -latest-prerequisite time: 2023-12-08 20:03:24 +0900 +--output/tsv/sra_accession-sra_experiment.tsv (2023-12-15 20:06:44 +0900) +latest-prerequisite time: 2023-12-15 20:06:44 +0900 ................................ Rule for TTL (output/ttl/sra_accession-sra_project.ttl) @@ -6558,12 +6546,12 @@ Rule for TTL (output/ttl/sra_accession-sra_project.ttl) Investigating output/ttl/sra_accession-sra_project.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:34:15 +0900 +timestamp: 2023-12-16 01:38:02 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_accession-sra_project.tsv (2023-12-08 20:04:23 +0900) -latest-prerequisite time: 2023-12-08 20:04:23 +0900 +--output/tsv/sra_accession-sra_project.tsv (2023-12-15 20:07:42 +0900) +latest-prerequisite time: 2023-12-15 20:07:42 +0900 ................................ Rule for TTL (output/ttl/sra_accession-sra_run.ttl) @@ -6571,12 +6559,12 @@ Rule for TTL (output/ttl/sra_accession-sra_run.ttl) Investigating output/ttl/sra_accession-sra_run.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:39:50 +0900 +timestamp: 2023-12-16 01:43:16 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_accession-sra_run.tsv (2023-12-08 20:11:08 +0900) -latest-prerequisite time: 2023-12-08 20:11:08 +0900 +--output/tsv/sra_accession-sra_run.tsv (2023-12-15 20:14:27 +0900) +latest-prerequisite time: 2023-12-15 20:14:27 +0900 ................................ Rule for TTL (output/ttl/sra_accession-sra_sample.ttl) @@ -6584,12 +6572,12 @@ Rule for TTL (output/ttl/sra_accession-sra_sample.ttl) Investigating output/ttl/sra_accession-sra_sample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:44:38 +0900 +timestamp: 2023-12-16 01:48:00 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_accession-sra_sample.tsv (2023-12-08 20:17:01 +0900) -latest-prerequisite time: 2023-12-08 20:17:01 +0900 +--output/tsv/sra_accession-sra_sample.tsv (2023-12-15 20:20:15 +0900) +latest-prerequisite time: 2023-12-15 20:20:15 +0900 ................................ Rule for TTL (output/ttl/sra_experiment-bioproject.ttl) @@ -6597,12 +6585,12 @@ Rule for TTL (output/ttl/sra_experiment-bioproject.ttl) Investigating output/ttl/sra_experiment-bioproject.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:48:31 +0900 +timestamp: 2023-12-16 01:51:53 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_experiment-bioproject.tsv (2023-12-08 20:20:17 +0900) -latest-prerequisite time: 2023-12-08 20:20:17 +0900 +--output/tsv/sra_experiment-bioproject.tsv (2023-12-15 20:23:37 +0900) +latest-prerequisite time: 2023-12-15 20:23:37 +0900 ................................ Rule for TTL (output/ttl/sra_experiment-biosample.ttl) @@ -6610,12 +6598,12 @@ Rule for TTL (output/ttl/sra_experiment-biosample.ttl) Investigating output/ttl/sra_experiment-biosample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:52:46 +0900 +timestamp: 2023-12-16 01:56:13 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_experiment-biosample.tsv (2023-12-08 20:23:32 +0900) -latest-prerequisite time: 2023-12-08 20:23:32 +0900 +--output/tsv/sra_experiment-biosample.tsv (2023-12-15 20:26:38 +0900) +latest-prerequisite time: 2023-12-15 20:26:38 +0900 ................................ Rule for TTL (output/ttl/sra_experiment-sra_project.ttl) @@ -6623,12 +6611,12 @@ Rule for TTL (output/ttl/sra_experiment-sra_project.ttl) Investigating output/ttl/sra_experiment-sra_project.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 01:57:32 +0900 +timestamp: 2023-12-16 02:01:02 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_experiment-sra_project.tsv (2023-12-08 20:26:17 +0900) -latest-prerequisite time: 2023-12-08 20:26:17 +0900 +--output/tsv/sra_experiment-sra_project.tsv (2023-12-15 20:29:12 +0900) +latest-prerequisite time: 2023-12-15 20:29:12 +0900 ................................ Rule for TTL (output/ttl/sra_experiment-sra_sample.ttl) @@ -6636,12 +6624,12 @@ Rule for TTL (output/ttl/sra_experiment-sra_sample.ttl) Investigating output/ttl/sra_experiment-sra_sample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:01:21 +0900 +timestamp: 2023-12-16 02:04:56 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_experiment-sra_sample.tsv (2023-12-08 20:29:01 +0900) -latest-prerequisite time: 2023-12-08 20:29:01 +0900 +--output/tsv/sra_experiment-sra_sample.tsv (2023-12-15 20:31:51 +0900) +latest-prerequisite time: 2023-12-15 20:31:51 +0900 ................................ Rule for TTL (output/ttl/sra_project-bioproject.ttl) @@ -6649,12 +6637,12 @@ Rule for TTL (output/ttl/sra_project-bioproject.ttl) Investigating output/ttl/sra_project-bioproject.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:01:26 +0900 +timestamp: 2023-12-16 02:05:02 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_project-bioproject.tsv (2023-12-08 20:30:01 +0900) -latest-prerequisite time: 2023-12-08 20:30:01 +0900 +--output/tsv/sra_project-bioproject.tsv (2023-12-15 20:32:51 +0900) +latest-prerequisite time: 2023-12-15 20:32:51 +0900 ................................ Rule for TTL (output/ttl/sra_run-bioproject.ttl) @@ -6662,12 +6650,12 @@ Rule for TTL (output/ttl/sra_run-bioproject.ttl) Investigating output/ttl/sra_run-bioproject.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:05:24 +0900 +timestamp: 2023-12-16 02:08:49 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_run-bioproject.tsv (2023-12-08 20:33:39 +0900) -latest-prerequisite time: 2023-12-08 20:33:39 +0900 +--output/tsv/sra_run-bioproject.tsv (2023-12-15 20:36:28 +0900) +latest-prerequisite time: 2023-12-15 20:36:28 +0900 ................................ Rule for TTL (output/ttl/sra_run-biosample.ttl) @@ -6675,12 +6663,12 @@ Rule for TTL (output/ttl/sra_run-biosample.ttl) Investigating output/ttl/sra_run-biosample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:09:37 +0900 +timestamp: 2023-12-16 02:12:59 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_run-biosample.tsv (2023-12-08 20:37:03 +0900) -latest-prerequisite time: 2023-12-08 20:37:03 +0900 +--output/tsv/sra_run-biosample.tsv (2023-12-15 20:39:58 +0900) +latest-prerequisite time: 2023-12-15 20:39:58 +0900 ................................ Rule for TTL (output/ttl/sra_run-sra_experiment.ttl) @@ -6688,12 +6676,12 @@ Rule for TTL (output/ttl/sra_run-sra_experiment.ttl) Investigating output/ttl/sra_run-sra_experiment.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:14:23 +0900 +timestamp: 2023-12-16 02:17:58 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_run-sra_experiment.tsv (2023-12-08 20:39:39 +0900) -latest-prerequisite time: 2023-12-08 20:39:39 +0900 +--output/tsv/sra_run-sra_experiment.tsv (2023-12-15 20:42:50 +0900) +latest-prerequisite time: 2023-12-15 20:42:50 +0900 ................................ Rule for TTL (output/ttl/sra_run-sra_project.ttl) @@ -6701,12 +6689,12 @@ Rule for TTL (output/ttl/sra_run-sra_project.ttl) Investigating output/ttl/sra_run-sra_project.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:18:42 +0900 +timestamp: 2023-12-16 02:22:20 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_run-sra_project.tsv (2023-12-08 20:42:42 +0900) -latest-prerequisite time: 2023-12-08 20:42:42 +0900 +--output/tsv/sra_run-sra_project.tsv (2023-12-15 20:45:38 +0900) +latest-prerequisite time: 2023-12-15 20:45:38 +0900 ................................ Rule for TTL (output/ttl/sra_run-sra_sample.ttl) @@ -6714,12 +6702,12 @@ Rule for TTL (output/ttl/sra_run-sra_sample.ttl) Investigating output/ttl/sra_run-sra_sample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:22:38 +0900 +timestamp: 2023-12-16 02:26:19 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_run-sra_sample.tsv (2023-12-08 20:45:24 +0900) -latest-prerequisite time: 2023-12-08 20:45:24 +0900 +--output/tsv/sra_run-sra_sample.tsv (2023-12-15 20:48:32 +0900) +latest-prerequisite time: 2023-12-15 20:48:32 +0900 ................................ Rule for TTL (output/ttl/sra_sample-biosample.ttl) @@ -6727,12 +6715,12 @@ Rule for TTL (output/ttl/sra_sample-biosample.ttl) Investigating output/ttl/sra_sample-biosample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:26:42 +0900 +timestamp: 2023-12-16 02:30:08 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/sra_sample-biosample.tsv (2023-12-08 20:48:20 +0900) -latest-prerequisite time: 2023-12-08 20:48:20 +0900 +--output/tsv/sra_sample-biosample.tsv (2023-12-15 20:51:33 +0900) +latest-prerequisite time: 2023-12-15 20:51:33 +0900 ................................ Rule for TTL (output/ttl/swisslipids-chebi.ttl) @@ -6740,12 +6728,12 @@ Rule for TTL (output/ttl/swisslipids-chebi.ttl) Investigating output/ttl/swisslipids-chebi.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:26:43 +0900 +timestamp: 2023-12-16 02:30:09 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/swisslipids-chebi.tsv (2023-12-08 20:48:35 +0900) -latest-prerequisite time: 2023-12-08 20:48:35 +0900 +--output/tsv/swisslipids-chebi.tsv (2023-12-15 20:51:47 +0900) +latest-prerequisite time: 2023-12-15 20:51:47 +0900 ................................ Rule for TTL (output/ttl/swisslipids-hmdb.ttl) @@ -6753,12 +6741,12 @@ Rule for TTL (output/ttl/swisslipids-hmdb.ttl) Investigating output/ttl/swisslipids-hmdb.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:26:43 +0900 +timestamp: 2023-12-16 02:30:10 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/swisslipids-hmdb.tsv (2023-12-08 20:48:48 +0900) -latest-prerequisite time: 2023-12-08 20:48:48 +0900 +--output/tsv/swisslipids-hmdb.tsv (2023-12-15 20:52:01 +0900) +latest-prerequisite time: 2023-12-15 20:52:01 +0900 ................................ Rule for TTL (output/ttl/swisslipids-inchi_key.ttl) @@ -6766,12 +6754,12 @@ Rule for TTL (output/ttl/swisslipids-inchi_key.ttl) Investigating output/ttl/swisslipids-inchi_key.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:26:49 +0900 +timestamp: 2023-12-16 02:30:15 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/swisslipids-inchi_key.tsv (2023-12-08 20:49:01 +0900) -latest-prerequisite time: 2023-12-08 20:49:01 +0900 +--output/tsv/swisslipids-inchi_key.tsv (2023-12-15 20:52:13 +0900) +latest-prerequisite time: 2023-12-15 20:52:13 +0900 ................................ Rule for TTL (output/ttl/taxonomy-pubmed.ttl) @@ -6779,12 +6767,12 @@ Rule for TTL (output/ttl/taxonomy-pubmed.ttl) Investigating output/ttl/taxonomy-pubmed.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 02:26:50 +0900 +timestamp: 2023-12-16 02:30:16 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/taxonomy-pubmed.tsv (2023-12-08 20:49:01 +0900) -latest-prerequisite time: 2023-12-08 20:49:01 +0900 +--output/tsv/taxonomy-pubmed.tsv (2023-12-15 20:52:14 +0900) +latest-prerequisite time: 2023-12-15 20:52:14 +0900 ................................ Rule for TTL (output/ttl/togovar-clinvar.ttl) @@ -7052,12 +7040,12 @@ Rule for TTL (output/ttl/uniprot_reference_proteome-assembly_insdc.ttl) Investigating output/ttl/uniprot_reference_proteome-assembly_insdc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 06:31:57 +0900 +timestamp: 2023-12-16 06:36:16 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/uniprot_reference_proteome-assembly_insdc.tsv (2023-12-08 20:55:43 +0900) -latest-prerequisite time: 2023-12-08 20:55:43 +0900 +--output/tsv/uniprot_reference_proteome-assembly_insdc.tsv (2023-12-15 20:58:42 +0900) +latest-prerequisite time: 2023-12-15 20:58:42 +0900 ................................ Rule for TTL (output/ttl/uniprot_reference_proteome-assembly_refseq.ttl) @@ -7065,12 +7053,12 @@ Rule for TTL (output/ttl/uniprot_reference_proteome-assembly_refseq.ttl) Investigating output/ttl/uniprot_reference_proteome-assembly_refseq.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 06:31:57 +0900 +timestamp: 2023-12-16 06:36:16 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/uniprot_reference_proteome-assembly_refseq.tsv (2023-12-08 20:55:43 +0900) -latest-prerequisite time: 2023-12-08 20:55:43 +0900 +--output/tsv/uniprot_reference_proteome-assembly_refseq.tsv (2023-12-15 20:58:42 +0900) +latest-prerequisite time: 2023-12-15 20:58:42 +0900 ................................ Rule for TTL (output/ttl/uniprot_reference_proteome-taxonomy.ttl) @@ -7078,44 +7066,44 @@ Rule for TTL (output/ttl/uniprot_reference_proteome-taxonomy.ttl) Investigating output/ttl/uniprot_reference_proteome-taxonomy.ttl class: Rake::FileTask task needed: true -timestamp: 2023-12-09 06:32:01 +0900 +timestamp: 2023-12-16 06:36:21 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-12-08 17:00:15 +0900) ---output/tsv/uniprot_reference_proteome-taxonomy.tsv (2023-12-08 20:55:44 +0900) -latest-prerequisite time: 2023-12-08 20:55:44 +0900 +--output/tsv/uniprot_reference_proteome-taxonomy.tsv (2023-12-15 20:58:43 +0900) +latest-prerequisite time: 2023-12-15 20:58:43 +0900 ................................ ### Update ID and Label TTL for atc if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/atc.ttl has no timestamp file -# File output/id-label/atc.ttl is created 11.31558857452264 days ago (will be updated when >5 days) +# File output/id-label/atc.ttl is created 7.0029968000006715 days ago (will be updated when >5 days) ## Update output/id-label/atc.ttl -< 2023-12-09T06:32:03 atc +< 2023-12-16T06:36:23 atc togoid-rdfize-id-label atc -> 2023-12-09T06:32:04 atc +> 2023-12-16T06:36:24 atc ### Update ID and Label TTL for bioproject if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/bioproject.ttl is older than input/bioproject/download.lock ## Update output/id-label/bioproject.ttl -< 2023-12-09T06:32:04 bioproject +< 2023-12-16T06:36:24 bioproject togoid-rdfize-id-label bioproject -> 2023-12-09T06:32:10 bioproject +> 2023-12-16T06:36:29 bioproject ### Update ID and Label TTL for cellosaurus if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/cellosaurus.ttl is newer than input/cellosaurus/download.lock # => Preserving output/ttl/cellosaurus.ttl ### Update ID and Label TTL for ec if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/ec.ttl has no timestamp file -# File output/id-label/ec.ttl is created 11.313849159660672 days ago (will be updated when >5 days) +# File output/id-label/ec.ttl is created 7.002988968078473 days ago (will be updated when >5 days) ## Update output/id-label/ec.ttl -< 2023-12-09T06:32:10 ec +< 2023-12-16T06:36:29 ec togoid-rdfize-id-label ec -> 2023-12-09T06:32:11 ec +> 2023-12-16T06:36:30 ec ### Update ID and Label TTL for flybase_gene if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/flybase_gene.ttl has no timestamp file -# File output/id-label/flybase_gene.ttl is created 11.312304128296956 days ago (will be updated when >5 days) +# File output/id-label/flybase_gene.ttl is created 7.002223245334594 days ago (will be updated when >5 days) ## Update output/id-label/flybase_gene.ttl -< 2023-12-09T06:32:11 flybase_gene +< 2023-12-16T06:36:30 flybase_gene togoid-rdfize-id-label flybase_gene -> 2023-12-09T06:33:18 flybase_gene +> 2023-12-16T06:37:37 flybase_gene ### Update ID and Label TTL for hmdb if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/hmdb.ttl is newer than input/hmdb/download.lock # => Preserving output/ttl/hmdb.ttl @@ -7127,116 +7115,116 @@ togoid-rdfize-id-label flybase_gene # => Preserving output/ttl/interpro.ttl ### Update ID and Label TTL for mgi_allele if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/mgi_allele.ttl has no timestamp file -# File output/id-label/mgi_allele.ttl is created 11.3130640227753 days ago (will be updated when >5 days) +# File output/id-label/mgi_allele.ttl is created 7.002993240558923 days ago (will be updated when >5 days) ## Update output/id-label/mgi_allele.ttl -< 2023-12-09T06:33:18 mgi_allele +< 2023-12-16T06:37:37 mgi_allele togoid-rdfize-id-label mgi_allele -> 2023-12-09T06:33:19 mgi_allele +> 2023-12-16T06:37:38 mgi_allele ### Update ID and Label TTL for mgi_gene if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/mgi_gene.ttl is older than input/mgi_gene/download.lock ## Update output/id-label/mgi_gene.ttl -< 2023-12-09T06:33:19 mgi_gene +< 2023-12-16T06:37:38 mgi_gene togoid-rdfize-id-label mgi_gene -> 2023-12-09T06:33:23 mgi_gene +> 2023-12-16T06:37:42 mgi_gene ### Update ID and Label TTL for mgi_genotype if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/mgi_genotype.ttl is older than input/mgi_genotype/download.lock ## Update output/id-label/mgi_genotype.ttl -< 2023-12-09T06:33:23 mgi_genotype +< 2023-12-16T06:37:42 mgi_genotype togoid-rdfize-id-label mgi_genotype -> 2023-12-09T06:33:24 mgi_genotype +> 2023-12-16T06:37:43 mgi_genotype ### Update ID and Label TTL for mirbase if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/mirbase.ttl has no timestamp file -# File output/id-label/mirbase.ttl is created 11.312011912416875 days ago (will be updated when >5 days) +# File output/id-label/mirbase.ttl is created 7.001942412189873 days ago (will be updated when >5 days) ## Update output/id-label/mirbase.ttl -< 2023-12-09T06:33:24 mirbase +< 2023-12-16T06:37:43 mirbase togoid-rdfize-id-label mirbase -> 2023-12-09T06:34:55 mirbase +> 2023-12-16T06:39:15 mirbase ### Update ID and Label TTL for pathbank if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/pathbank.ttl has no timestamp file -# File output/id-label/pathbank.ttl is created 11.313035352168496 days ago (will be updated when >5 days) +# File output/id-label/pathbank.ttl is created 7.002994641063866 days ago (will be updated when >5 days) ## Update output/id-label/pathbank.ttl -< 2023-12-09T06:34:55 pathbank +< 2023-12-16T06:39:15 pathbank togoid-rdfize-id-label pathbank -> 2023-12-09T06:34:56 pathbank +> 2023-12-16T06:39:16 pathbank ### Update ID and Label TTL for pfam if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/pfam.ttl has no timestamp file -# File output/id-label/pfam.ttl is created 11.313006186977038 days ago (will be updated when >5 days) +# File output/id-label/pfam.ttl is created 7.002968802316562 days ago (will be updated when >5 days) ## Update output/id-label/pfam.ttl -< 2023-12-09T06:34:56 pfam +< 2023-12-16T06:39:16 pfam togoid-rdfize-id-label pfam -> 2023-12-09T06:34:59 pfam +> 2023-12-16T06:39:19 pfam ### Update ID and Label TTL for pubchem_pathway if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/pubchem_pathway.ttl has no timestamp file -# File output/id-label/pubchem_pathway.ttl is created 11.313024822468947 days ago (will be updated when >5 days) +# File output/id-label/pubchem_pathway.ttl is created 7.00299640826088 days ago (will be updated when >5 days) ## Update output/id-label/pubchem_pathway.ttl -< 2023-12-09T06:34:59 pubchem_pathway +< 2023-12-16T06:39:19 pubchem_pathway togoid-rdfize-id-label pubchem_pathway -> 2023-12-09T06:35:00 pubchem_pathway +> 2023-12-16T06:39:20 pubchem_pathway ### Update ID and Label TTL for refseq_rna if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/refseq_rna.ttl is newer than input/refseq_rna/download.lock # => Preserving output/ttl/refseq_rna.ttl ### Update ID and Label TTL for rgd if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/rgd.ttl has no timestamp file -# File output/id-label/rgd.ttl is created 11.312399371136042 days ago (will be updated when >5 days) +# File output/id-label/rgd.ttl is created 7.002366523692176 days ago (will be updated when >5 days) ## Update output/id-label/rgd.ttl -< 2023-12-09T06:35:00 rgd +< 2023-12-16T06:39:20 rgd togoid-rdfize-id-label rgd -> 2023-12-09T06:35:56 rgd +> 2023-12-16T06:40:15 rgd ### Update ID and Label TTL for sgd if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/sgd.ttl has no timestamp file -# File output/id-label/sgd.ttl is created 11.312290677811747 days ago (will be updated when >5 days) +# File output/id-label/sgd.ttl is created 7.002259189934386 days ago (will be updated when >5 days) ## Update output/id-label/sgd.ttl -< 2023-12-09T06:35:56 sgd +< 2023-12-16T06:40:15 sgd togoid-rdfize-id-label sgd -> 2023-12-09T06:37:00 sgd +> 2023-12-16T06:41:20 sgd ### Update ID and Label TTL for swisslipids if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/swisslipids.ttl is older than input/swisslipids/download.lock ## Update output/id-label/swisslipids.ttl -< 2023-12-09T06:37:00 swisslipids +< 2023-12-16T06:41:20 swisslipids togoid-rdfize-id-label swisslipids -> 2023-12-09T06:37:07 swisslipids +> 2023-12-16T06:41:26 swisslipids ### Update ID and Label TTL for tair if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/tair.ttl has no timestamp file -# File output/id-label/tair.ttl is created 11.312297446774155 days ago (will be updated when >5 days) +# File output/id-label/tair.ttl is created 7.002261841958369 days ago (will be updated when >5 days) ## Update output/id-label/tair.ttl -< 2023-12-09T06:37:07 tair +< 2023-12-16T06:41:26 tair togoid-rdfize-id-label tair -> 2023-12-09T06:38:11 tair +> 2023-12-16T06:42:31 tair ### Update ID and Label TTL for uniprot_reference_proteome if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/uniprot_reference_proteome.ttl has no timestamp file -# File output/id-label/uniprot_reference_proteome.ttl is created 11.313005755501168 days ago (will be updated when >5 days) +# File output/id-label/uniprot_reference_proteome.ttl is created 7.002973107356019 days ago (will be updated when >5 days) ## Update output/id-label/uniprot_reference_proteome.ttl -< 2023-12-09T06:38:11 uniprot_reference_proteome +< 2023-12-16T06:42:31 uniprot_reference_proteome togoid-rdfize-id-label uniprot_reference_proteome -> 2023-12-09T06:38:14 uniprot_reference_proteome +> 2023-12-16T06:42:34 uniprot_reference_proteome ### Update ID and Label TTL for vgnc if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/vgnc.ttl has no timestamp file -# File output/id-label/vgnc.ttl is created 11.312297561050602 days ago (will be updated when >5 days) +# File output/id-label/vgnc.ttl is created 7.002260447993276 days ago (will be updated when >5 days) ## Update output/id-label/vgnc.ttl -< 2023-12-09T06:38:14 vgnc +< 2023-12-16T06:42:34 vgnc togoid-rdfize-id-label vgnc -> 2023-12-09T06:39:19 vgnc +> 2023-12-16T06:43:39 vgnc ### Update ID and Label TTL for wormbase_gene if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/wormbase_gene.ttl has no timestamp file -# File output/id-label/wormbase_gene.ttl is created 11.312304747509838 days ago (will be updated when >5 days) +# File output/id-label/wormbase_gene.ttl is created 7.002268777233784 days ago (will be updated when >5 days) ## Update output/id-label/wormbase_gene.ttl -< 2023-12-09T06:39:19 wormbase_gene +< 2023-12-16T06:43:39 wormbase_gene togoid-rdfize-id-label wormbase_gene -> 2023-12-09T06:40:23 wormbase_gene +> 2023-12-16T06:44:43 wormbase_gene ### Update ID and Label TTL for xenbase_gene if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/xenbase_gene.ttl has no timestamp file -# File output/id-label/xenbase_gene.ttl is created 11.3123027761861 days ago (will be updated when >5 days) +# File output/id-label/xenbase_gene.ttl is created 7.002263588665636 days ago (will be updated when >5 days) ## Update output/id-label/xenbase_gene.ttl -< 2023-12-09T06:40:23 xenbase_gene +< 2023-12-16T06:44:43 xenbase_gene togoid-rdfize-id-label xenbase_gene -> 2023-12-09T06:41:28 xenbase_gene +> 2023-12-16T06:45:48 xenbase_gene ### Update ID and Label TTL for zfin_gene if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/zfin_gene.ttl has no timestamp file -# File output/id-label/zfin_gene.ttl is created 11.312305395794954 days ago (will be updated when >5 days) +# File output/id-label/zfin_gene.ttl is created 7.002268872376215 days ago (will be updated when >5 days) ## Update output/id-label/zfin_gene.ttl -< 2023-12-09T06:41:28 zfin_gene +< 2023-12-16T06:45:48 zfin_gene togoid-rdfize-id-label zfin_gene -> 2023-12-09T06:42:32 zfin_gene +> 2023-12-16T06:46:53 zfin_gene Rule for ID and Label TTL (output/id-label/cellosaurus.ttl) ------------------------------ Investigating output/id-label/cellosaurus.ttl @@ -7298,4 +7286,4 @@ latest-prerequisite time: 2023-12-08 17:00:15 +0900 ................................ -*** Finished: 2023-12-09T06:42:32 *** +*** Finished: 2023-12-16T06:46:53 *** From 0edb78e5616dd7fb1f156ca7367a8573353c0273 Mon Sep 17 00:00:00 2001 From: sh-ikeda Date: Mon, 18 Dec 2023 11:29:54 +0900 Subject: [PATCH 6/7] update count --- log/pair_count_history.tsv | 1 + 1 file changed, 1 insertion(+) diff --git a/log/pair_count_history.tsv b/log/pair_count_history.tsv index f748b529..bac68b1f 100644 --- a/log/pair_count_history.tsv +++ b/log/pair_count_history.tsv @@ -16,3 +16,4 @@ Date affy_probeset-ncbigene assembly_insdc-bioproject assembly_insdc-biosample a 2023-11-27 19063 1906757 1918263 1852636 2303395 196587 257770 98690 2303395 68557 38153 141392 34314 3091832 8206 11766 1915138 47707 13954 1878362 433124 1439514 2126 12004 11110 33678 3448 8014 8178 1711989 115826 3340026 4019 4849 5671 54210 12180884 14437446 44278 6179217 4503879 12180887 218298 0 219677 10179574 141 5046 290 1270 49240 35219 1995 40970 43667 21167 1325 23383 1912 43615 16942 33774 28381 18954 20365 13701 217899 522 104230 275237 8660 220065 129729 111606 59409158 193975949 1533582 1533178 30407 1402682 20191 1283 109057 435537 1275 718778680 199 305 130 12853 47785 12345 137319849 6318 16674 16849 21567 7229 11043 9063 56590 24607 100568 55041 79654 7723 122475 391915 10712 574 1486 8352 9693 10380 2390 9166278 10684938 11101841 25107 50230587 43728 71696 17541 18383 211671 60014779 58384699 42518 6464 32835 49333660 112107 19850 46225 27127 26233 2460780 2804840 4800754 18299774 4319 4337 4316 4298 1192 1798 7832 8040 1685211 726658 530587 339565 341431 1461 4812 141021 2327813 10789 31767 116111622 32308 69387 1252527 2814 620221 1196 267131 12983 42184 327 400679 919326 202526 3335 15106 182 710946 179949941 267549861 227165 57852462 188790 5817042 50390902 57882313 201816 7528 4387 135188 1438 36026464 464221 27691022 270279 30644195 542748 35120880 29829587 26800643 27135732 27143544 27143358 464237 28593261 28916090 28966143 28948900 28923793 27699956 4276 26026 593209 49104 720705 66877211 72473309 287277970 60732887 935843 60001809 692119 173346179 4541270358 2586 10146 65606 39736080 9437437 9647434 9647434 466768100 81875 284374766 230955 13734202 12027805 16106 7021 8188 355933 259506 49539508 251702059 437326 151 505473 11468 951 4014 1361 29837 33519 2023-12-04 19063 1924605 1936253 1869243 2324769 196884 257946 100103 2324769 68557 38153 141392 34314 3091832 8206 11766 1915138 47707 13954 1878362 433124 1439514 2126 12004 11110 33678 3448 8014 8178 1711989 115826 3340026 4019 4849 5671 54210 12180884 14437446 44278 6179217 4924829 12180887 218298 52748677 219677 10179574 141 5046 290 1270 49240 35219 1995 40970 43667 21167 1325 23383 1912 43615 16942 33774 28381 18954 20365 13701 217899 522 104230 275237 8660 220065 129729 111606 59409158 193975949 1533582 1533178 30407 1402682 20191 1283 109057 435537 1275 718778680 199 305 130 12853 47785 12345 137319849 6318 16674 16849 21567 7229 11043 9063 56590 24607 100637 55041 79466 7723 122501 392060 10712 574 1486 8352 9693 10380 2390 9401534 10957535 11411226 25107 50230587 43742 71696 17541 18387 211687 59978063 58384950 42518 6464 32835 49294065 112107 19850 46225 27127 26233 2460780 2804840 4800754 18299774 4319 4337 4316 4298 1192 1798 7832 8040 1685211 726658 530587 339565 341431 1461 4812 141021 2327813 10789 31767 116111622 32308 69387 1252527 2814 620221 1196 267131 12983 42184 327 400679 919326 202526 3335 15106 182 710946 179949941 267549861 227165 57852462 188790 5817042 50390902 57882313 201816 7528 4387 135188 1438 36026464 464221 27691022 270279 30644195 542748 35120880 29829587 26800643 27135732 27143544 27143358 464237 28593261 28916090 28966143 28948900 28923793 27699956 4276 26026 593209 49106 720705 66877211 72473309 287277970 60732887 935843 60001809 692119 173346179 4595278330 2586 10146 65606 39736080 9437437 9647434 9647434 466768100 81875 284374766 230955 13734202 12027805 16106 7021 8188 355933 259506 49539508 251702059 437326 151 505473 11468 951 4014 1361 29837 33519 2023-12-11 19063 1931425 1943066 1875870 2359519 197486 258531 100433 2359519 68557 38153 141392 34314 3091832 8206 11766 1915138 47707 13954 1878362 433124 1439514 2126 12004 11110 33678 3448 8014 8178 1711989 115826 3340026 4019 4849 5671 54210 12180884 14437446 44278 6179217 4924829 12180887 218298 52748677 219677 10179574 141 5046 290 1270 49240 35219 1995 40970 43667 21167 1325 23383 1912 43615 16942 33774 28381 18954 20365 13701 217899 522 104230 275237 8660 220065 129729 111606 59409158 193975949 1533582 1533178 30407 1402682 20191 1283 109057 435537 1275 718778680 199 305 130 12885 47826 12345 137319849 6318 16674 16849 21567 7229 11043 9063 56590 24607 100681 55041 79466 7723 122501 392060 10712 574 1486 8352 9693 10380 2390 9401535 10957535 11411226 25107 59267218 43742 71696 17541 18390 211691 59902828 58545286 42518 6464 32835 49172030 112107 19850 46225 27132 26233 2460780 2804840 4800754 18299774 4319 4337 4316 4298 1192 1798 7832 8040 1685211 726658 530587 339565 341431 1461 4812 141021 2327813 10789 31767 116069142 32308 69387 1252527 2814 620221 1196 267131 12983 42184 327 400679 919326 202526 3335 15106 182 710946 179950006 267549861 227165 57852462 188790 5817042 50390902 57882313 201816 7528 4387 135188 1438 36026464 465022 27780237 270279 30842754 545391 35331467 30086390 26890778 27211369 27233679 27233493 465038 28691217 28992466 29065822 29046856 29015366 27789171 4276 26026 593209 49088 720705 66877211 72473309 287277970 60732887 935843 60001809 692119 173346179 4605985207 2586 10146 65606 39736080 9437437 9647434 9647434 466768100 81875 284374766 230955 13734202 12027805 16106 7021 8188 355933 259506 49539508 251702059 437326 151 505473 11468 951 4014 1361 29837 33519 +2023-12-16 19063 1945629 1957294 1889897 2381354 197910 259137 100626 2381354 68557 38153 141392 34314 3091832 8206 11766 1915138 47707 13954 1878362 433124 1439514 2126 12004 11110 33678 3448 8014 8178 1711989 115826 3340026 4019 4849 5671 54210 12180884 14437446 44278 6179217 4924829 12180887 218298 52748677 219677 10179574 141 5046 290 1270 49240 35219 1995 40970 43667 21167 1325 23383 1912 43615 16942 33774 28381 18954 20365 13701 217899 522 104230 275237 8660 220065 129729 111606 59409158 193975949 1533582 1533178 30407 1402682 20191 1283 109057 435537 1275 718778680 199 305 130 12890 47841 12345 137319849 6318 16674 16849 21567 7229 11043 9063 56590 24607 100770 55041 79466 7724 122809 393496 10712 574 1486 8352 9693 10380 2390 9485712 11058301 11567584 25107 68314687 43739 71696 17541 18398 211693 60108727 58752275 42517 6464 32835 49342670 112107 19850 46225 27131 26233 2460780 2804840 4800754 18299774 4319 4337 4316 4298 1192 1798 7832 8040 1685211 726658 530587 339565 341431 1461 4812 141021 2327813 10789 31767 116072087 32308 69387 1252527 2814 620221 1196 264859 12983 40546 332 400679 861452 198020 3335 14362 185 665149 179950008 267549861 227165 57852462 188790 5817042 50390902 57882313 201816 7528 4387 135188 1438 36026464 465654 27808778 270359 30935643 547096 35427306 30173279 26934437 27243277 27277338 27277152 465670 28736336 29024695 29111866 29091975 29059787 27817712 4276 26026 593209 49092 720705 66877211 72473309 287277970 60732887 935843 60001809 692119 173346179 4616648409 2586 10146 65606 39736080 9437437 9647434 9647434 466768100 81875 284374766 230955 13734202 12027805 16106 7021 8188 355933 259506 49539508 251702059 437326 151 505473 11468 951 4014 1361 29837 33519 \ No newline at end of file From 3b232a895c1a0c771e6fa4b260c482d0935b1159 Mon Sep 17 00:00:00 2001 From: sh-ikeda Date: Tue, 19 Dec 2023 09:43:23 +0900 Subject: [PATCH 7/7] update date --- docs/help.md | 4 ++-- docs/help_ja.md | 4 ++-- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/docs/help.md b/docs/help.md index 2bacc204..b23b1e1c 100644 --- a/docs/help.md +++ b/docs/help.md @@ -1,5 +1,5 @@ # TogoID ver. 1.1 -Datasets last updated: 2023-12-11 +Datasets last updated: 2023-12-18 ## About - [TogoID](https://togoid.dbcls.jp/) is an ID conversion service implementing unique features with an intuitive web interface and an API for programmatic access. TogoID currently supports 89 datasets covering various biological categories. TogoID users can perform exploratory multistep conversions to find a path among IDs. To guide the interpretation of biological meanings in the conversions, we crafted an [ontology](https://togoid.dbcls.jp/ontology) that defines the semantics of the dataset relations. @@ -22,7 +22,7 @@ Shuya Ikeda, Hiromasa Ono, Tazro Ohta, Hirokazu Chiba, Yuki Naito, Yuki Moriya, - [API Documentation (Swagger)](https://togoid.dbcls.jp/apidoc/) -## Statistics (as of 2023-12-11) +## Statistics (as of 2023-12-18) - Number of target datasets - 102 (from 72 databases) - For details on the target DBs and ID examples, please refer to the "DATASETS" tab. diff --git a/docs/help_ja.md b/docs/help_ja.md index 545944a0..1dccfb8b 100644 --- a/docs/help_ja.md +++ b/docs/help_ja.md @@ -1,5 +1,5 @@ # TogoID ver. 1.1 -Datasets last updated: 2023-12-11 +Datasets last updated: 2023-12-18 ## About - [TogoID](https://togoid.dbcls.jp/) は、直感的なインターフェースにより生命科学系データベース(DB)間のつながりを探索的に確認しながらID変換を行うことができるウェブアプリケーションです。同一の実体を指すID間の変換だけでなく、関連する別のカテゴリーのIDへの変換も可能です。また、直接リンクされていないDBのID間でも、他のDBを経由した変換を探索することができます。 @@ -28,7 +28,7 @@ Datasets last updated: 2023-12-11 - [API Documentation (Swagger)](https://togoid.dbcls.jp/apidoc/) -## 統計 (2023-12-11) +## 統計 (2023-12-18) - 対象データセット数 - 102 (72のデータベースに由来) - 対象DBの詳細やID例については、"DATASETS" タブ からご覧いただけます。