diff --git a/config/dataset.yaml b/config/dataset.yaml index bd9b9602..5b7533eb 100644 --- a/config/dataset.yaml +++ b/config/dataset.yaml @@ -497,7 +497,7 @@ nbdc_human_db: - ["hum0004","hum0006","hum0007","hum0008","hum0010","hum0001","hum0011","hum0012","hum0018","hum0019"] - ["hum0004.v1","hum0006.v5","hum0007.v1","hum0008.v1","hum0010.v1","hum0001.v1","hum0011.v1","hum0012.v1","hum0018.v1","hum0019.v1"] ncbigene: - label: NCBI gene + label: NCBI Gene catalog: nbdc00073 category: Gene regex: '^(?\d+)$' diff --git a/docs/help.md b/docs/help.md index d4fd6681..dec8269f 100644 --- a/docs/help.md +++ b/docs/help.md @@ -1,5 +1,5 @@ # TogoID ver. 1.1 -Datasets last updated: 2023-11-27 +Datasets last updated: 2023-12-04 ## About - [TogoID](https://togoid.dbcls.jp/) is an ID conversion service implementing unique features with an intuitive web interface and an API for programmatic access. TogoID currently supports 89 datasets covering various biological categories. TogoID users can perform exploratory multistep conversions to find a path among IDs. To guide the interpretation of biological meanings in the conversions, we crafted an [ontology](https://togoid.dbcls.jp/ontology) that defines the semantics of the dataset relations. @@ -22,7 +22,7 @@ Shuya Ikeda, Hiromasa Ono, Tazro Ohta, Hirokazu Chiba, Yuki Naito, Yuki Moriya, - [API Documentation (Swagger)](https://togoid.dbcls.jp/apidoc/) -## Statistics (as of 2023-11-27) +## Statistics (as of 2023-12-04) - Number of target datasets - 102 (from 72 databases) - For details on the target DBs and ID examples, please refer to the "DATASETS" tab. diff --git a/docs/help_ja.md b/docs/help_ja.md index 6539b298..e6efccfc 100644 --- a/docs/help_ja.md +++ b/docs/help_ja.md @@ -1,5 +1,5 @@ # TogoID ver. 1.1 -Datasets last updated: 2023-11-27 +Datasets last updated: 2023-12-04 ## About - [TogoID](https://togoid.dbcls.jp/) は、直感的なインターフェースにより生命科学系データベース(DB)間のつながりを探索的に確認しながらID変換を行うことができるウェブアプリケーションです。同一の実体を指すID間の変換だけでなく、関連する別のカテゴリーのIDへの変換も可能です。また、直接リンクされていないDBのID間でも、他のDBを経由した変換を探索することができます。 @@ -28,7 +28,7 @@ Datasets last updated: 2023-11-27 - [API Documentation (Swagger)](https://togoid.dbcls.jp/apidoc/) -## 統計 (2023-11-27) +## 統計 (2023-12-04) - 対象データセット数 - 102 (72のデータベースに由来) - 対象DBの詳細やID例については、"DATASETS" タブ からご覧いただけます。 diff --git a/log/error.log b/log/error.log index c9a75af4..a775d9c3 100644 --- a/log/error.log +++ b/log/error.log @@ -1,1026 +1,5 @@ -# Error: output/tsv/affy_probeset-ncbigene.tsv new file size per old 248 / 314378 = 0.000788859271323057 < 0.5 -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/assembly_insdc-bioproject.tsv new file size per old 0 / 49176622 = 0.0 < 0.5 -# Error: Failed to create output/tsv/assembly_insdc-bioproject.tsv or created file was empty -# Error: output/tsv/assembly_insdc-biosample.tsv new file size per old 0 / 52185705 = 0.0 < 0.5 -# Error: Failed to create output/tsv/assembly_insdc-biosample.tsv or created file was empty -# Error: output/tsv/assembly_insdc-insdc_master.tsv new file size per old 0 / 54792622 = 0.0 < 0.5 -# Error: Failed to create output/tsv/assembly_insdc-insdc_master.tsv or created file was empty -# Error: output/tsv/bioproject-biosample.tsv new file size per old 0 / 57583818 = 0.0 < 0.5 -# Error: Failed to create output/tsv/bioproject-biosample.tsv or created file was empty -# Error: output/tsv/bioproject_umbrella-bioproject.tsv new file size per old 0 / 2333425 = 0.0 < 0.5 -# Error: Failed to create output/tsv/bioproject_umbrella-bioproject.tsv or created file was empty -# Error: output/tsv/biosample-bioproject.tsv new file size per old 0 / 57583818 = 0.0 < 0.5 -# Error: Failed to create output/tsv/biosample-bioproject.tsv or created file was empty -# Error: output/tsv/chembl_target-ensembl_gene.tsv new file size per old 248 / 61845 = 0.0040100250626566416 < 0.5 -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv new file size per old 67456 / 463730916 = 0.0001454636679862854 < 0.5 -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-affy_probeset.tsv new file size per old 0 / 5921737 = 0.0 < 0.5 -# Error: Failed to create output/tsv/ensembl_transcript-affy_probeset.tsv or created file was empty -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv new file size per old 248 / 4752880 = 5.217888943125011e-05 < 0.5 -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv new file size per old 67456 / 324577782 = 0.00020782691774016743 < 0.5 -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/gea-bioproject.tsv new file size per old 0 / 3032 = 0.0 < 0.5 -# Error: Failed to create output/tsv/gea-bioproject.tsv or created file was empty -# Error: output/tsv/gea-biosample.tsv new file size per old 0 / 121104 = 0.0 < 0.5 -# Error: Failed to create output/tsv/gea-biosample.tsv or created file was empty -# Error: output/tsv/hgnc-ccds.tsv new file size per old 248 / 540016 = 0.00045924565198068206 < 0.5 -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ccds.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ccds.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv new file size per old 248 / 28390 = 0.00873547023599859 < 0.5 -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ec.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ec.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv new file size per old 248 / 893375 = 0.0002775989925843011 < 0.5 -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv new file size per old 248 / 596189 = 0.00041597547086578247 < 0.5 -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv new file size per old 248 / 301258 = 0.0008232146532208273 < 0.5 -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-insdc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-insdc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv new file size per old 248 / 17966 = 0.013803851719915395 < 0.5 -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-lrg.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-lrg.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv new file size per old 248 / 311534 = 0.0007960607830926962 < 0.5 -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mgi_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mgi_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv new file size per old 248 / 30592 = 0.008106694560669456 < 0.5 -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mirbase.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mirbase.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv new file size per old 248 / 583534 = 0.00042499665829240455 < 0.5 -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv new file size per old 248 / 213543 = 0.0011613586022487274 < 0.5 -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv new file size per old 248 / 484788 = 0.0005115638175862439 < 0.5 -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-pubmed.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-pubmed.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv new file size per old 248 / 461015 = 0.0005379434508638548 < 0.5 -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv new file size per old 248 / 250822 = 0.0009887489933099968 < 0.5 -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-rgd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-rgd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv new file size per old 248 / 259333 = 0.0009562994296907837 < 0.5 -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hp_inheritance-omim_phenotype.tsv new file size per old 0 / 129900 = 0.0 < 0.5 -# Error: Failed to create output/tsv/hp_inheritance-omim_phenotype.tsv or created file was empty -# Error: output/tsv/insdc-bioproject.tsv new file size per old 0 / 1191557755 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc-bioproject.tsv or created file was empty -# Error: output/tsv/insdc-biosample.tsv new file size per old 0 / 4269980335 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc-biosample.tsv or created file was empty -# Error: output/tsv/insdc_master-bioproject.tsv new file size per old 0 / 41801168 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc_master-bioproject.tsv or created file was empty -# Error: output/tsv/insdc_master-biosample.tsv new file size per old 0 / 43765492 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc_master-biosample.tsv or created file was empty -# Error: output/tsv/jga_study-jga_dataset.tsv new file size per old 0 / 4378 = 0.0 < 0.5 -# Error: Failed to create output/tsv/jga_study-jga_dataset.tsv or created file was empty -# Error: output/tsv/jga_study-nbdc_human_db.tsv new file size per old 0 / 5795 = 0.0 < 0.5 -# Error: Failed to create output/tsv/jga_study-nbdc_human_db.tsv or created file was empty -# Error: output/tsv/jga_study-pubmed.tsv new file size per old 0 / 2597 = 0.0 < 0.5 -# Error: Failed to create output/tsv/jga_study-pubmed.tsv or created file was empty -# Error: output/tsv/medgen-hp_phenotype.tsv new file size per old 248 / 283458 = 0.0008749091576177071 < 0.5 -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv new file size per old 248 / 289268 = 0.0008573364492442994 < 0.5 -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv new file size per old 248 / 366639 = 0.0006764146749254716 < 0.5 -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv new file size per old 248 / 104108 = 0.0023821416221616013 < 0.5 -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv new file size per old 248 / 176688 = 0.0014036040930906456 < 0.5 -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv new file size per old 248 / 137225 = 0.001807250865367098 < 0.5 -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv new file size per old 248 / 155460 = 0.0015952656631931044 < 0.5 -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-doid.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-doid.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-doid.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-doid.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv new file size per old 248 / 9184 = 0.02700348432055749 < 0.5 -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv new file size per old 248 / 25262 = 0.009817116617844984 < 0.5 -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv new file size per old 248 / 133836 = 0.0018530141367046236 < 0.5 -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv new file size per old 248 / 145395 = 0.0017056982702293752 < 0.5 -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv new file size per old 248 / 146923 = 0.001687958998931413 < 0.5 -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv new file size per old 248 / 38240 = 0.006485355648535565 < 0.5 -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/nando-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/nando-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/nando-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/nando-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv new file size per old 248 / 99337 = 0.0024965521406927933 < 0.5 -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv new file size per old 248 / 54005 = 0.004592167391908156 < 0.5 -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv new file size per old 248 / 60424 = 0.004104329405534225 < 0.5 -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv new file size per old 248 / 60188 = 0.004120422675616402 < 0.5 -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv new file size per old 248 / 17104 = 0.014499532273152479 < 0.5 -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv new file size per old 248 / 23642 = 0.010489806276964725 < 0.5 -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv new file size per old 248 / 98942 = 0.002506518970710113 < 0.5 -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv new file size per old 248 / 103255 = 0.0024018207350733622 < 0.5 -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv new file size per old 2232 / 21907743 = 0.0001018817867271859 < 0.5 -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv new file size per old 248 / 10899870 = 2.2752564938847895e-05 < 0.5 -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-interpro.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-interpro.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv new file size per old 248 / 4665872 = 5.315190815350271e-05 < 0.5 -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pdb_ccd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pdb_ccd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv new file size per old 248 / 4414345 = 5.618047524604443e-05 < 0.5 -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pfam.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pfam.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv new file size per old 248 / 4173296 = 5.9425451729280644e-05 < 0.5 -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv new file size per old 248 / 72636 = 0.003414284927584118 < 0.5 -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-atc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-atc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv new file size per old 248 / 2127659 = 0.0001165600314712085 < 0.5 -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-chebi.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-chebi.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chembl_compound.tsv new file size per old 0 / 52771371 = 0.0 < 0.5 -# Error: Failed to create output/tsv/pubchem_compound-chembl_compound.tsv or created file was empty -# Error: output/tsv/pubchem_compound-drugbank.tsv new file size per old 248 / 165607 = 0.001497521240044201 < 0.5 -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv new file size per old 248 / 577555 = 0.00042939633454822486 < 0.5 -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv new file size per old 248 / 386522 = 0.0006416193644863681 < 0.5 -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv new file size per old 248 / 1318229 = 0.00018813119723507828 < 0.5 -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pubchem_compound.tsv new file size per old 0 / 18535342 = 0.0 < 0.5 -# Error: Failed to create output/tsv/pubchem_pathway-pubchem_compound.tsv or created file was empty -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv new file size per old 248 / 55502 = 0.004468307448380239 < 0.5 -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-uniprot.tsv new file size per old 0 / 9132367 = 0.0 < 0.5 -# Error: Failed to create output/tsv/pubchem_pathway-uniprot.tsv or created file was empty -# Error: output/tsv/pubchem_pathway-wikipathways.tsv new file size per old 248 / 15771 = 0.015725064992708135 < 0.5 -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv new file size per old 248 / 276996 = 0.0008953197880113792 < 0.5 -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv new file size per old 248 / 10770993 = 2.3024803748363775e-05 < 0.5 -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv new file size per old 248 / 71679 = 0.003459869696842869 < 0.5 -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_reaction-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_reaction-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML +# Error: output/tsv/chembl_target-ensembl_gene.tsv new file size per old 0 / 61845 = 0.0 < 0.5 +# Error: Failed to create output/tsv/chembl_target-ensembl_gene.tsv or created file was empty +# Error: output/tsv/pubchem_compound-atc.tsv new file size per old 28643 / 72636 = 0.39433614185803184 < 0.5 # Error: output/tsv/togovar-clinvar.tsv new file size per old 0 / 13681182 = 0.0 < 0.5 # Error: Failed to create output/tsv/togovar-clinvar.tsv or created file was empty diff --git a/log/pair_count.tsv b/log/pair_count.tsv index 84a073f2..051276b5 100644 --- a/log/pair_count.tsv +++ b/log/pair_count.tsv @@ -1,12 +1,12 @@ affy_probeset-ncbigene.tsv 19063 -assembly_insdc-bioproject.tsv 1906757 -assembly_insdc-biosample.tsv 1918263 -assembly_insdc-insdc_master.tsv 1852636 -bioproject-biosample.tsv 2303395 -bioproject-geo_series.tsv 196587 -bioproject-pubmed.tsv 257770 -bioproject_umbrella-bioproject.tsv 98690 -biosample-bioproject.tsv 2303395 +assembly_insdc-bioproject.tsv 1924605 +assembly_insdc-biosample.tsv 1936253 +assembly_insdc-insdc_master.tsv 1869243 +bioproject-biosample.tsv 2324769 +bioproject-geo_series.tsv 196884 +bioproject-pubmed.tsv 257946 +bioproject_umbrella-bioproject.tsv 100103 +biosample-bioproject.tsv 2324769 cellosaurus-ncit_disease.tsv 68557 cellosaurus-orphanet_phenotype.tsv 38153 chebi-inchi_key.tsv 141392 @@ -38,10 +38,10 @@ ensembl_gene-ensembl_protein.tsv 12180884 ensembl_gene-ensembl_transcript.tsv 14437446 ensembl_gene-hgnc.tsv 44278 ensembl_gene-ncbigene.tsv 6179217 -ensembl_gene-uniprot.tsv 4503879 +ensembl_gene-uniprot.tsv 4924829 ensembl_protein-ensembl_transcript.tsv 12180887 ensembl_transcript-affy_probeset.tsv 218298 -ensembl_transcript-go.tsv 0 +ensembl_transcript-go.tsv 52748677 ensembl_transcript-hgnc.tsv 219677 ensembl_transcript-refseq_rna.tsv 10179574 gea-bioproject.tsv 141 @@ -100,12 +100,12 @@ medgen-omim_phenotype.tsv 11043 medgen-orphanet_phenotype.tsv 9063 mgi_gene-ensembl_gene.tsv 56590 mgi_gene-hgnc.tsv 24607 -mgi_gene-mgi_allele.tsv 100568 +mgi_gene-mgi_allele.tsv 100637 mgi_gene-ncbigene.tsv 55041 -mgi_gene-uniprot.tsv 79654 +mgi_gene-uniprot.tsv 79466 mgi_genotype-doid.tsv 7723 -mgi_genotype-mgi_allele.tsv 122475 -mgi_genotype-mp.tsv 391915 +mgi_genotype-mgi_allele.tsv 122501 +mgi_genotype-mp.tsv 392060 mondo-doid.tsv 10712 mondo-hp_phenotype.tsv 574 mondo-meddra.tsv 1486 @@ -113,22 +113,22 @@ mondo-mesh.tsv 8352 mondo-omim_phenotype.tsv 9693 mondo-orphanet_phenotype.tsv 10380 nando-mondo.tsv 2390 -ncbigene-ensembl_gene.tsv 9166278 -ncbigene-ensembl_protein.tsv 10684938 -ncbigene-ensembl_transcript.tsv 11101841 +ncbigene-ensembl_gene.tsv 9401534 +ncbigene-ensembl_protein.tsv 10957535 +ncbigene-ensembl_transcript.tsv 11411226 ncbigene-flybase_gene.tsv 25107 ncbigene-go.tsv 50230587 -ncbigene-hgnc.tsv 43728 +ncbigene-hgnc.tsv 43742 ncbigene-mgi_gene.tsv 71696 ncbigene-mirbase.tsv 17541 -ncbigene-omim_gene.tsv 18383 -ncbigene-refseq_genomic.tsv 211671 -ncbigene-refseq_protein.tsv 60014779 -ncbigene-refseq_rna.tsv 58384699 +ncbigene-omim_gene.tsv 18387 +ncbigene-refseq_genomic.tsv 211687 +ncbigene-refseq_protein.tsv 59978063 +ncbigene-refseq_rna.tsv 58384950 ncbigene-rgd.tsv 42518 ncbigene-sgd.tsv 6464 ncbigene-tair.tsv 32835 -ncbigene-taxonomy.tsv 49333660 +ncbigene-taxonomy.tsv 49294065 ncbigene-vgnc.tsv 112107 ncbigene-wormbase_gene.tsv 19850 ncbigene-xenbase_gene.tsv 46225 @@ -210,7 +210,7 @@ sra_sample-biosample.tsv 27699956 swisslipids-chebi.tsv 4276 swisslipids-hmdb.tsv 26026 swisslipids-inchi_key.tsv 593209 -taxonomy-pubmed.tsv 49104 +taxonomy-pubmed.tsv 49106 togovar-clinvar.tsv 720705 togovar-dbsnp.tsv 66877211 togovar-ensembl_gene.tsv 72473309 @@ -249,4 +249,4 @@ wikipathways-hmdb.tsv 4014 wikipathways-lipidmaps.tsv 1361 wikipathways-ncbigene.tsv 29837 wikipathways-uniprot.tsv 33519 -total 4541270358 +total 4595278330 diff --git a/log/update.log b/log/update.log index 0c81c8f3..43124604 100644 --- a/log/update.log +++ b/log/update.log @@ -1,12 +1,12 @@ -*** Started: 2023-11-27T10:10:47 *** +*** Started: 2023-12-01T17:00:15 *** ## Prepare input files for Bioproject # Checking lock file input/bioproject/download.lock for download # Local file time: 2023-11-26 21:02:12 +0900 (input/bioproject/bioproject.xml) -# Remote file time: 2023-11-26 12:02:12 +0000 (https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml) -# Local file size: 2538601074 (input/bioproject/bioproject.xml) -# Remote file size: 2538601074 (https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml) -# Preserving timestamp of the input/bioproject/download.lock +# Remote file time: 2023-11-30 11:49:43 +0000 (https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/bioproject https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml +python bin/bioproject_xml2tsv.py input/bioproject/bioproject.xml > input/bioproject/bioproject.tsv +# Overwriting timestamp of the input/bioproject/download.lock ## Prepare input files for Cellosaurus # Checking lock file input/cellosaurus/download.lock for download # Local file time: 2023-10-05 17:17:42 +0900 (input/cellosaurus/cellosaurus.txt) @@ -16,8 +16,9 @@ # Preserving timestamp of the input/cellosaurus/download.lock ## Prepare input files for Ensembl # Checking lock file input/ensembl/download.lock for download -# File input/ensembl/taxonomy.txt is created 2.7111715453239005 days ago (will be updated when >5 days) -# Preserving timestamp of the input/ensembl/download.lock +# File input/ensembl/taxonomy.txt is created 6.999236472774721 days ago (will be updated when >5 days) +sparql_csv2tsv.sh input/ensembl/taxonomy.rq https://rdfportal.org/ebi/sparql > input/ensembl/taxonomy.txt +# Overwriting timestamp of the input/ensembl/download.lock ## Prepare input files for HMDB # Checking lock file input/hmdb/download.lock for download # Local file time: 2021-11-18 04:54:48 +0900 (input/hmdb/hmdb_metabolites.zip) @@ -61,53 +62,48 @@ bin/sparql_csv2tsv.sh bin/sparql/hp_category.rq https://rdfportal.org/bioportal/ ## Prepare input files for MGI_GENE # Checking lock file input/mgi_gene/download.lock for download # Local file time: 2023-11-20 22:09:59 +0900 (input/mgi_gene/MRK_List2.rpt) -# Remote file time: 2023-11-20 13:09:59 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_List2.rpt) -# Local file size: 83328412 (input/mgi_gene/MRK_List2.rpt) -# Remote file size: 83328412 (https://www.informatics.jax.org/downloads/reports/MRK_List2.rpt) +# Remote file time: 2023-11-27 13:07:53 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_List2.rpt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MRK_List2.rpt # Local file time: 2023-11-20 22:05:56 +0900 (input/mgi_gene/MGI_Gene_Model_Coord.rpt) -# Remote file time: 2023-11-20 13:05:56 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_Gene_Model_Coord.rpt) -# Local file size: 9323066 (input/mgi_gene/MGI_Gene_Model_Coord.rpt) -# Remote file size: 9323066 (https://www.informatics.jax.org/downloads/reports/MGI_Gene_Model_Coord.rpt) +# Remote file time: 2023-11-27 13:04:20 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_Gene_Model_Coord.rpt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MGI_Gene_Model_Coord.rpt # Local file time: 2023-11-20 22:10:12 +0900 (input/mgi_gene/MRK_SwissProt_TrEMBL.rpt) -# Remote file time: 2023-11-20 13:10:12 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_SwissProt_TrEMBL.rpt) -# Local file size: 2119647 (input/mgi_gene/MRK_SwissProt_TrEMBL.rpt) -# Remote file size: 2119647 (https://www.informatics.jax.org/downloads/reports/MRK_SwissProt_TrEMBL.rpt) +# Remote file time: 2023-11-27 13:08:05 +0000 (https://www.informatics.jax.org/downloads/reports/MRK_SwissProt_TrEMBL.rpt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MRK_SwissProt_TrEMBL.rpt # Local file time: 2023-11-20 22:04:28 +0900 (input/mgi_gene/HGNC_AllianceHomology.rpt) -# Remote file time: 2023-11-20 13:04:28 +0000 (https://www.informatics.jax.org/downloads/reports/HGNC_AllianceHomology.rpt) -# Local file size: 11343869 (input/mgi_gene/HGNC_AllianceHomology.rpt) -# Remote file size: 11343869 (https://www.informatics.jax.org/downloads/reports/HGNC_AllianceHomology.rpt) +# Remote file time: 2023-11-27 13:03:30 +0000 (https://www.informatics.jax.org/downloads/reports/HGNC_AllianceHomology.rpt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/HGNC_AllianceHomology.rpt # Local file time: 2023-11-20 22:08:55 +0900 (input/mgi_gene/MGI_PhenotypicAllele.rpt) -# Remote file time: 2023-11-20 13:08:55 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_PhenotypicAllele.rpt) -# Local file size: 22985294 (input/mgi_gene/MGI_PhenotypicAllele.rpt) -# Remote file size: 22985294 (https://www.informatics.jax.org/downloads/reports/MGI_PhenotypicAllele.rpt) -# Preserving timestamp of the input/mgi_gene/download.lock +# Remote file time: 2023-11-27 13:06:46 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_PhenotypicAllele.rpt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_gene https://www.informatics.jax.org/downloads/reports/MGI_PhenotypicAllele.rpt +# Overwriting timestamp of the input/mgi_gene/download.lock ## Prepare input files for MGI_GENOTYPE # Checking lock file input/mgi_genotype/download.lock for download # Local file time: 2023-11-20 22:05:28 +0900 (input/mgi_genotype/MGI_DiseaseGeneModel.rpt) -# Remote file time: 2023-11-20 13:05:28 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_DiseaseGeneModel.rpt) -# Local file size: 10744011 (input/mgi_genotype/MGI_DiseaseGeneModel.rpt) -# Remote file size: 10744011 (https://www.informatics.jax.org/downloads/reports/MGI_DiseaseGeneModel.rpt) -# Preserving timestamp of the input/mgi_genotype/download.lock +# Remote file time: 2023-11-27 13:04:04 +0000 (https://www.informatics.jax.org/downloads/reports/MGI_DiseaseGeneModel.rpt) +wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/mgi_genotype https://www.informatics.jax.org/downloads/reports/MGI_DiseaseGeneModel.rpt +ruby bin/query_mousemine.rb > input/mgi_genotype/mousemine_genotype.tsv +# Overwriting timestamp of the input/mgi_genotype/download.lock ## Prepare input files for NCBI Gene # Checking lock file input/ncbigene/download.lock for download -# Local file time: 2023-11-24 14:44:42 +0900 (input/ncbigene/gene2refseq.gz) -# Remote file time: 2023-11-26 06:53:49 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz) +# Local file time: 2023-11-26 15:53:49 +0900 (input/ncbigene/gene2refseq.gz) +# Remote file time: 2023-11-30 22:39:43 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz gzip -dc input/ncbigene/gene2refseq.gz > input/ncbigene/gene2refseq -# Local file time: 2023-11-24 14:41:30 +0900 (input/ncbigene/gene2ensembl.gz) -# Remote file time: 2023-11-26 06:50:45 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz) +# Local file time: 2023-11-26 15:50:45 +0900 (input/ncbigene/gene2ensembl.gz) +# Remote file time: 2023-11-30 22:36:03 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz gzip -dc input/ncbigene/gene2ensembl.gz > input/ncbigene/gene2ensembl -# Local file time: 2023-11-24 14:42:12 +0900 (input/ncbigene/gene2go.gz) -# Remote file time: 2023-11-26 06:51:31 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz) +# Local file time: 2023-11-26 15:51:31 +0900 (input/ncbigene/gene2go.gz) +# Remote file time: 2023-11-30 22:36:59 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz gzip -dc input/ncbigene/gene2go.gz > input/ncbigene/gene2go -# Local file time: 2023-11-24 14:50:58 +0900 (input/ncbigene/Homo_sapiens.gene_info.gz) -# Remote file time: 2023-11-26 06:59:39 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz) +# Local file time: 2023-11-26 15:59:39 +0900 (input/ncbigene/Homo_sapiens.gene_info.gz) +# Remote file time: 2023-11-30 22:45:41 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz gzip -dc input/ncbigene/Homo_sapiens.gene_info.gz > input/ncbigene/Homo_sapiens.gene_info -# Local file time: 2023-11-24 14:46:26 +0900 (input/ncbigene/gene_info.gz) -# Remote file time: 2023-11-26 06:55:23 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz) +# Local file time: 2023-11-26 15:55:23 +0900 (input/ncbigene/gene_info.gz) +# Remote file time: 2023-11-30 22:41:18 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz gzip -dc input/ncbigene/gene_info.gz > input/ncbigene/gene_info # Overwriting timestamp of the input/ncbigene/download.lock @@ -186,8 +182,8 @@ gzip -dc input/ncbigene/gene_info.gz > input/ncbigene/gene_info # Preserving timestamp of the input/reactome/download.lock ## Prepare input files for RefSeq Protein # Checking lock file input/refseq_protein/download.lock for download -# Local file time: 2023-11-22 19:31:08 +0900 (input/refseq_protein/gene_refseq_uniprotkb_collab.gz) -# Remote file time: 2023-11-26 10:28:47 +0000 (https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz) +# Local file time: 2023-11-26 19:28:47 +0900 (input/refseq_protein/gene_refseq_uniprotkb_collab.gz) +# Remote file time: 2023-11-29 11:20:45 +0000 (https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/refseq_protein https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz # Overwriting timestamp of the input/refseq_protein/download.lock ## Prepare input files for RefSeq RNA @@ -214,8 +210,8 @@ wget --quiet --recursive --no-parent --no-directories --timestamping --no-check- # Preserving timestamp of the input/rhea/download.lock ## Prepare input files for SRA # Checking lock file input/sra/download.lock for download -# Local file time: 2023-11-24 05:10:07 +0900 (input/sra/SRA_Accessions.tab) -# Remote file time: 2023-11-26 20:15:31 +0000 (https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab) +# Local file time: 2023-11-27 05:15:31 +0900 (input/sra/SRA_Accessions.tab) +# Remote file time: 2023-11-30 20:46:32 +0000 (https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/sra https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab # Overwriting timestamp of the input/sra/download.lock ## Prepare input files for SwissLipids @@ -230,124 +226,89 @@ gzip -dc input/swisslipids/lipids2uniprot.tsv.gz > input/swisslipids/lipids2unip # Preserving timestamp of the input/uniprot/download.lock ## Prepare input files for Taxonomy # Checking lock file input/taxonomy/download.lock for download -# Local file time: 2023-11-24 17:28:34 +0900 (input/taxonomy/taxdump.tar.gz) -# Remote file time: 2023-11-27 01:28:33 +0000 (https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz) +# Local file time: 2023-11-27 10:28:33 +0900 (input/taxonomy/taxdump.tar.gz) +# Remote file time: 2023-12-01 08:28:40 +0000 (https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz) wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/taxonomy https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz mkdir -p input/taxonomy/taxdump && tar xzf input/taxonomy/taxdump.tar.gz -C input/taxonomy/taxdump/ # Overwriting timestamp of the input/taxonomy/download.lock ### Update TSV for affy_probeset-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/affy_probeset-ncbigene.tsv is newer than config/affy_probeset-ncbigene/config.yaml # File output/tsv/affy_probeset-ncbigene.tsv has no timestamp file -# File output/tsv/affy_probeset-ncbigene.tsv is created 9.43772451087096 days ago (will be updated when >5 days) +# File output/tsv/affy_probeset-ncbigene.tsv is created 13.733432759496692 days ago (will be updated when >5 days) ## Update config/affy_probeset-ncbigene/config.yaml => output/tsv/affy_probeset-ncbigene.tsv -< 2023-11-27T10:43:05 affy_probeset-ncbigene +< 2023-12-01T17:48:54 affy_probeset-ncbigene togoid-config config/affy_probeset-ncbigene update -# Error: output/tsv/affy_probeset-ncbigene.tsv new file size per old 248 / 314378 = 0.000788859271323057 < 0.5 -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/affy_probeset-ncbigene.tsv seems to contain HTML -# Failure: output/tsv/affy_probeset-ncbigene.tsv is not updated -> 2023-11-27T10:43:06 affy_probeset-ncbigene +# Success: output/tsv/affy_probeset-ncbigene.tsv is updated +> 2023-12-01T17:48:55 affy_probeset-ncbigene ### Update TSV for assembly_insdc-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/assembly_insdc-bioproject.tsv is newer than config/assembly_insdc-bioproject/config.yaml # File output/tsv/assembly_insdc-bioproject.tsv has no timestamp file -# File output/tsv/assembly_insdc-bioproject.tsv is created 9.437695679548392 days ago (will be updated when >5 days) +# File output/tsv/assembly_insdc-bioproject.tsv is created 13.733406266692453 days ago (will be updated when >5 days) ## Update config/assembly_insdc-bioproject/config.yaml => output/tsv/assembly_insdc-bioproject.tsv -< 2023-11-27T10:43:06 assembly_insdc-bioproject +< 2023-12-01T17:48:55 assembly_insdc-bioproject togoid-config config/assembly_insdc-bioproject update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/assembly_insdc-bioproject.tsv new file size per old 0 / 49176622 = 0.0 < 0.5 -# Error: Failed to create output/tsv/assembly_insdc-bioproject.tsv or created file was empty -# Failure: output/tsv/assembly_insdc-bioproject.tsv is not updated -> 2023-11-27T10:45:13 assembly_insdc-bioproject +# Success: output/tsv/assembly_insdc-bioproject.tsv is updated +> 2023-12-01T17:48:57 assembly_insdc-bioproject ### Update TSV for assembly_insdc-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/assembly_insdc-biosample.tsv is newer than config/assembly_insdc-biosample/config.yaml # File output/tsv/assembly_insdc-biosample.tsv has no timestamp file -# File output/tsv/assembly_insdc-biosample.tsv is created 9.439146443413067 days ago (will be updated when >5 days) +# File output/tsv/assembly_insdc-biosample.tsv is created 13.73340395747229 days ago (will be updated when >5 days) ## Update config/assembly_insdc-biosample/config.yaml => output/tsv/assembly_insdc-biosample.tsv -< 2023-11-27T10:45:13 assembly_insdc-biosample +< 2023-12-01T17:48:57 assembly_insdc-biosample togoid-config config/assembly_insdc-biosample update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/assembly_insdc-biosample.tsv new file size per old 0 / 52185705 = 0.0 < 0.5 -# Error: Failed to create output/tsv/assembly_insdc-biosample.tsv or created file was empty -# Failure: output/tsv/assembly_insdc-biosample.tsv is not updated -> 2023-11-27T10:47:20 assembly_insdc-biosample +# Success: output/tsv/assembly_insdc-biosample.tsv is updated +> 2023-12-01T17:48:59 assembly_insdc-biosample ### Update TSV for assembly_insdc-insdc_master if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/assembly_insdc-insdc_master.tsv is newer than config/assembly_insdc-insdc_master/config.yaml # File output/tsv/assembly_insdc-insdc_master.tsv has no timestamp file -# File output/tsv/assembly_insdc-insdc_master.tsv is created 9.440599655430255 days ago (will be updated when >5 days) +# File output/tsv/assembly_insdc-insdc_master.tsv is created 13.73340163606559 days ago (will be updated when >5 days) ## Update config/assembly_insdc-insdc_master/config.yaml => output/tsv/assembly_insdc-insdc_master.tsv -< 2023-11-27T10:47:21 assembly_insdc-insdc_master +< 2023-12-01T17:48:59 assembly_insdc-insdc_master togoid-config config/assembly_insdc-insdc_master update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/assembly_insdc-insdc_master.tsv new file size per old 0 / 54792622 = 0.0 < 0.5 -# Error: Failed to create output/tsv/assembly_insdc-insdc_master.tsv or created file was empty -# Failure: output/tsv/assembly_insdc-insdc_master.tsv is not updated -> 2023-11-27T10:49:28 assembly_insdc-insdc_master +# Success: output/tsv/assembly_insdc-insdc_master.tsv is updated +> 2023-12-01T17:49:01 assembly_insdc-insdc_master ### Update TSV for bioproject-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject-biosample.tsv is newer than config/bioproject-biosample/config.yaml # File output/tsv/bioproject-biosample.tsv is older than input/bioproject/download.lock ## Update config/bioproject-biosample/config.yaml => output/tsv/bioproject-biosample.tsv -< 2023-11-27T10:49:28 bioproject-biosample +< 2023-12-01T17:49:01 bioproject-biosample togoid-config config/bioproject-biosample update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/bioproject-biosample.tsv new file size per old 0 / 57583818 = 0.0 < 0.5 -# Error: Failed to create output/tsv/bioproject-biosample.tsv or created file was empty -# Failure: output/tsv/bioproject-biosample.tsv is not updated -> 2023-11-27T10:51:36 bioproject-biosample +# Success: output/tsv/bioproject-biosample.tsv is updated +> 2023-12-01T17:49:03 bioproject-biosample ### Update TSV for bioproject-geo_series if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject-geo_series.tsv is newer than config/bioproject-geo_series/config.yaml # File output/tsv/bioproject-geo_series.tsv is older than input/bioproject/download.lock ## Update config/bioproject-geo_series/config.yaml => output/tsv/bioproject-geo_series.tsv -< 2023-11-27T10:51:36 bioproject-geo_series +< 2023-12-01T17:49:03 bioproject-geo_series togoid-config config/bioproject-geo_series update # Success: output/tsv/bioproject-geo_series.tsv is updated -> 2023-11-27T10:51:37 bioproject-geo_series +> 2023-12-01T17:49:05 bioproject-geo_series ### Update TSV for bioproject-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject-pubmed.tsv is newer than config/bioproject-pubmed/config.yaml # File output/tsv/bioproject-pubmed.tsv is older than input/bioproject/download.lock ## Update config/bioproject-pubmed/config.yaml => output/tsv/bioproject-pubmed.tsv -< 2023-11-27T10:51:37 bioproject-pubmed +< 2023-12-01T17:49:05 bioproject-pubmed togoid-config config/bioproject-pubmed update # Success: output/tsv/bioproject-pubmed.tsv is updated -> 2023-11-27T10:51:38 bioproject-pubmed +> 2023-12-01T17:49:06 bioproject-pubmed ### Update TSV for bioproject_umbrella-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/bioproject_umbrella-bioproject.tsv is newer than config/bioproject_umbrella-bioproject/config.yaml # File output/tsv/bioproject_umbrella-bioproject.tsv has no timestamp file -# File output/tsv/bioproject_umbrella-bioproject.tsv is created 9.443506058505012 days ago (will be updated when >5 days) +# File output/tsv/bioproject_umbrella-bioproject.tsv is created 13.73341550829059 days ago (will be updated when >5 days) ## Update config/bioproject_umbrella-bioproject/config.yaml => output/tsv/bioproject_umbrella-bioproject.tsv -< 2023-11-27T10:51:38 bioproject_umbrella-bioproject +< 2023-12-01T17:49:06 bioproject_umbrella-bioproject togoid-config config/bioproject_umbrella-bioproject update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/bioproject_umbrella-bioproject.tsv new file size per old 0 / 2333425 = 0.0 < 0.5 -# Error: Failed to create output/tsv/bioproject_umbrella-bioproject.tsv or created file was empty -# Failure: output/tsv/bioproject_umbrella-bioproject.tsv is not updated -> 2023-11-27T10:53:46 bioproject_umbrella-bioproject +# Success: output/tsv/bioproject_umbrella-bioproject.tsv is updated +> 2023-12-01T17:49:07 bioproject_umbrella-bioproject ### Update TSV for biosample-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/biosample-bioproject.tsv is newer than config/biosample-bioproject/config.yaml # File output/tsv/biosample-bioproject.tsv has no timestamp file -# File output/tsv/biosample-bioproject.tsv is created 9.444952671320973 days ago (will be updated when >5 days) +# File output/tsv/biosample-bioproject.tsv is created 13.733394916606029 days ago (will be updated when >5 days) ## Update config/biosample-bioproject/config.yaml => output/tsv/biosample-bioproject.tsv -< 2023-11-27T10:53:46 biosample-bioproject +< 2023-12-01T17:49:07 biosample-bioproject togoid-config config/biosample-bioproject update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/biosample-bioproject.tsv new file size per old 0 / 57583818 = 0.0 < 0.5 -# Error: Failed to create output/tsv/biosample-bioproject.tsv or created file was empty -# Failure: output/tsv/biosample-bioproject.tsv is not updated -> 2023-11-27T10:55:53 biosample-bioproject +# Success: output/tsv/biosample-bioproject.tsv is updated +> 2023-12-01T17:49:09 biosample-bioproject ### Update TSV for cellosaurus-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/cellosaurus-ncit_disease.tsv is newer than config/cellosaurus-ncit_disease/config.yaml # File output/tsv/cellosaurus-ncit_disease.tsv is newer than input/cellosaurus/download.lock @@ -356,120 +317,177 @@ curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out # File output/tsv/cellosaurus-orphanet_phenotype.tsv is newer than config/cellosaurus-orphanet_phenotype/config.yaml # File output/tsv/cellosaurus-orphanet_phenotype.tsv is newer than input/cellosaurus/download.lock # => Preserving output/tsv/cellosaurus-orphanet_phenotype.tsv -### Update TSV for chebi-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +### Update TSV for chebi-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chebi-inchi_key.tsv is newer than config/chebi-inchi_key/config.yaml # File output/tsv/chebi-inchi_key.tsv has no timestamp file -# File output/tsv/chebi-inchi_key.tsv is created 2.6970082080089237 days ago (will be updated when >5 days) -# => Preserving output/tsv/chebi-inchi_key.tsv -### Update TSV for chembl_compound-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chebi-inchi_key.tsv is created 6.984000668867234 days ago (will be updated when >5 days) +## Update config/chebi-inchi_key/config.yaml => output/tsv/chebi-inchi_key.tsv +< 2023-12-01T17:49:09 chebi-inchi_key +togoid-config config/chebi-inchi_key update +# Success: output/tsv/chebi-inchi_key.tsv is updated +> 2023-12-01T17:49:10 chebi-inchi_key +### Update TSV for chembl_compound-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-chebi.tsv is newer than config/chembl_compound-chebi/config.yaml # File output/tsv/chembl_compound-chebi.tsv has no timestamp file -# File output/tsv/chembl_compound-chebi.tsv is created 2.696691309854236 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-chebi.tsv -### Update TSV for chembl_compound-chembl_target if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-chebi.tsv is created 6.983691988757141 days ago (will be updated when >5 days) +## Update config/chembl_compound-chebi/config.yaml => output/tsv/chembl_compound-chebi.tsv +< 2023-12-01T17:49:10 chembl_compound-chebi +togoid-config config/chembl_compound-chebi update +# Success: output/tsv/chembl_compound-chebi.tsv is updated +> 2023-12-01T17:49:10 chembl_compound-chebi +### Update TSV for chembl_compound-chembl_target if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-chembl_target.tsv is newer than config/chembl_compound-chembl_target/config.yaml # File output/tsv/chembl_compound-chembl_target.tsv has no timestamp file -# File output/tsv/chembl_compound-chembl_target.tsv is created 2.6820279620547454 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-chembl_target.tsv -### Update TSV for chembl_compound-drugbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-chembl_target.tsv is created 6.969033742107754 days ago (will be updated when >5 days) +## Update config/chembl_compound-chembl_target/config.yaml => output/tsv/chembl_compound-chembl_target.tsv +< 2023-12-01T17:49:10 chembl_compound-chembl_target +togoid-config config/chembl_compound-chembl_target update +# Success: output/tsv/chembl_compound-chembl_target.tsv is updated +> 2023-12-01T18:05:04 chembl_compound-chembl_target +### Update TSV for chembl_compound-drugbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-drugbank.tsv is newer than config/chembl_compound-drugbank/config.yaml # File output/tsv/chembl_compound-drugbank.tsv has no timestamp file -# File output/tsv/chembl_compound-drugbank.tsv is created 2.681718346961551 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-drugbank.tsv -### Update TSV for chembl_compound-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-drugbank.tsv is created 6.97976287406927 days ago (will be updated when >5 days) +## Update config/chembl_compound-drugbank/config.yaml => output/tsv/chembl_compound-drugbank.tsv +< 2023-12-01T18:05:04 chembl_compound-drugbank +togoid-config config/chembl_compound-drugbank update +# Success: output/tsv/chembl_compound-drugbank.tsv is updated +> 2023-12-01T18:05:05 chembl_compound-drugbank +### Update TSV for chembl_compound-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-hmdb.tsv is newer than config/chembl_compound-hmdb/config.yaml # File output/tsv/chembl_compound-hmdb.tsv has no timestamp file -# File output/tsv/chembl_compound-hmdb.tsv is created 2.6814095078182754 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-hmdb.tsv -### Update TSV for chembl_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-hmdb.tsv is created 6.979458558877141 days ago (will be updated when >5 days) +## Update config/chembl_compound-hmdb/config.yaml => output/tsv/chembl_compound-hmdb.tsv +< 2023-12-01T18:05:05 chembl_compound-hmdb +togoid-config config/chembl_compound-hmdb update +# Success: output/tsv/chembl_compound-hmdb.tsv is updated +> 2023-12-01T18:05:05 chembl_compound-hmdb +### Update TSV for chembl_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-inchi_key.tsv is newer than config/chembl_compound-inchi_key/config.yaml # File output/tsv/chembl_compound-inchi_key.tsv has no timestamp file -# File output/tsv/chembl_compound-inchi_key.tsv is created 2.680996212328773 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-inchi_key.tsv -### Update TSV for chembl_compound-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-inchi_key.tsv is created 6.979052739918195 days ago (will be updated when >5 days) +## Update config/chembl_compound-inchi_key/config.yaml => output/tsv/chembl_compound-inchi_key.tsv +< 2023-12-01T18:05:05 chembl_compound-inchi_key +togoid-config config/chembl_compound-inchi_key update +# Success: output/tsv/chembl_compound-inchi_key.tsv is updated +> 2023-12-01T18:05:10 chembl_compound-inchi_key +### Update TSV for chembl_compound-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-mesh.tsv is newer than config/chembl_compound-mesh/config.yaml # File output/tsv/chembl_compound-mesh.tsv has no timestamp file -# File output/tsv/chembl_compound-mesh.tsv is created 2.68097639989272 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-mesh.tsv -### Update TSV for chembl_compound-pdb_ccd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-mesh.tsv is created 6.979082126006539 days ago (will be updated when >5 days) +## Update config/chembl_compound-mesh/config.yaml => output/tsv/chembl_compound-mesh.tsv +< 2023-12-01T18:05:10 chembl_compound-mesh +togoid-config config/chembl_compound-mesh update +# Success: output/tsv/chembl_compound-mesh.tsv is updated +> 2023-12-01T18:05:10 chembl_compound-mesh +### Update TSV for chembl_compound-pdb_ccd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pdb_ccd.tsv is newer than config/chembl_compound-pdb_ccd/config.yaml # File output/tsv/chembl_compound-pdb_ccd.tsv has no timestamp file -# File output/tsv/chembl_compound-pdb_ccd.tsv is created 2.6806606014700463 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-pdb_ccd.tsv -### Update TSV for chembl_compound-pubchem_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-pdb_ccd.tsv is created 6.97877157269103 days ago (will be updated when >5 days) +## Update config/chembl_compound-pdb_ccd/config.yaml => output/tsv/chembl_compound-pdb_ccd.tsv +< 2023-12-01T18:05:10 chembl_compound-pdb_ccd +togoid-config config/chembl_compound-pdb_ccd update +# Success: output/tsv/chembl_compound-pdb_ccd.tsv is updated +> 2023-12-01T18:05:10 chembl_compound-pdb_ccd +### Update TSV for chembl_compound-pubchem_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pubchem_compound.tsv is newer than config/chembl_compound-pubchem_compound/config.yaml # File output/tsv/chembl_compound-pubchem_compound.tsv has no timestamp file -# File output/tsv/chembl_compound-pubchem_compound.tsv is created 2.680084845636412 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-pubchem_compound.tsv -### Update TSV for chembl_compound-pubchem_substance if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-pubchem_compound.tsv is created 6.978200685756551 days ago (will be updated when >5 days) +## Update config/chembl_compound-pubchem_compound/config.yaml => output/tsv/chembl_compound-pubchem_compound.tsv +< 2023-12-01T18:05:10 chembl_compound-pubchem_compound +togoid-config config/chembl_compound-pubchem_compound update +# Success: output/tsv/chembl_compound-pubchem_compound.tsv is updated +> 2023-12-01T18:05:14 chembl_compound-pubchem_compound +### Update TSV for chembl_compound-pubchem_substance if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pubchem_substance.tsv is newer than config/chembl_compound-pubchem_substance/config.yaml # File output/tsv/chembl_compound-pubchem_substance.tsv has no timestamp file -# File output/tsv/chembl_compound-pubchem_substance.tsv is created 2.679693704647338 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-pubchem_substance.tsv -### Update TSV for chembl_compound-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_compound-pubchem_substance.tsv is created 6.977853699289328 days ago (will be updated when >5 days) +## Update config/chembl_compound-pubchem_substance/config.yaml => output/tsv/chembl_compound-pubchem_substance.tsv +< 2023-12-01T18:05:14 chembl_compound-pubchem_substance +togoid-config config/chembl_compound-pubchem_substance update +# Success: output/tsv/chembl_compound-pubchem_substance.tsv is updated +> 2023-12-01T18:05:15 chembl_compound-pubchem_substance +### Update TSV for chembl_compound-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_compound-pubmed.tsv is newer than config/chembl_compound-pubmed/config.yaml # File output/tsv/chembl_compound-pubmed.tsv has no timestamp file -# File output/tsv/chembl_compound-pubmed.tsv is created 2.679416731805116 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_compound-pubmed.tsv +# File output/tsv/chembl_compound-pubmed.tsv is created 6.977590503989502 days ago (will be updated when >5 days) +## Update config/chembl_compound-pubmed/config.yaml => output/tsv/chembl_compound-pubmed.tsv +< 2023-12-01T18:05:15 chembl_compound-pubmed +togoid-config config/chembl_compound-pubmed update +# Success: output/tsv/chembl_compound-pubmed.tsv is updated +> 2023-12-01T18:05:18 chembl_compound-pubmed ### Update TSV for chembl_target-ensembl_gene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true # File output/tsv/chembl_target-ensembl_gene.tsv is older than config/chembl_target-ensembl_gene/config.yaml ## Update config/chembl_target-ensembl_gene/config.yaml => output/tsv/chembl_target-ensembl_gene.tsv -< 2023-11-27T10:55:53 chembl_target-ensembl_gene +< 2023-12-01T18:05:18 chembl_target-ensembl_gene togoid-config config/chembl_target-ensembl_gene update -# Error: output/tsv/chembl_target-ensembl_gene.tsv new file size per old 248 / 61845 = 0.0040100250626566416 < 0.5 -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/chembl_target-ensembl_gene.tsv seems to contain HTML +# Error: output/tsv/chembl_target-ensembl_gene.tsv new file size per old 0 / 61845 = 0.0 < 0.5 +# Error: Failed to create output/tsv/chembl_target-ensembl_gene.tsv or created file was empty # Failure: output/tsv/chembl_target-ensembl_gene.tsv is not updated -> 2023-11-27T10:55:54 chembl_target-ensembl_gene -### Update TSV for chembl_target-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +> 2023-12-01T18:05:19 chembl_target-ensembl_gene +### Update TSV for chembl_target-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-go.tsv is newer than config/chembl_target-go/config.yaml # File output/tsv/chembl_target-go.tsv has no timestamp file -# File output/tsv/chembl_target-go.tsv is created 2.6793993677934376 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_target-go.tsv -### Update TSV for chembl_target-interpro if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_target-go.tsv is created 6.977603679293854 days ago (will be updated when >5 days) +## Update config/chembl_target-go/config.yaml => output/tsv/chembl_target-go.tsv +< 2023-12-01T18:05:19 chembl_target-go +togoid-config config/chembl_target-go update +# Success: output/tsv/chembl_target-go.tsv is updated +> 2023-12-01T18:05:19 chembl_target-go +### Update TSV for chembl_target-interpro if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-interpro.tsv is newer than config/chembl_target-interpro/config.yaml # File output/tsv/chembl_target-interpro.tsv has no timestamp file -# File output/tsv/chembl_target-interpro.tsv is created 2.679383841407535 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_target-interpro.tsv -### Update TSV for chembl_target-pdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_target-interpro.tsv is created 6.977593157670706 days ago (will be updated when >5 days) +## Update config/chembl_target-interpro/config.yaml => output/tsv/chembl_target-interpro.tsv +< 2023-12-01T18:05:19 chembl_target-interpro +togoid-config config/chembl_target-interpro update +# Success: output/tsv/chembl_target-interpro.tsv is updated +> 2023-12-01T18:05:19 chembl_target-interpro +### Update TSV for chembl_target-pdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-pdb.tsv is newer than config/chembl_target-pdb/config.yaml # File output/tsv/chembl_target-pdb.tsv has no timestamp file -# File output/tsv/chembl_target-pdb.tsv is created 2.6793478868531246 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_target-pdb.tsv -### Update TSV for chembl_target-pfam if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_target-pdb.tsv is created 6.977562153422755 days ago (will be updated when >5 days) +## Update config/chembl_target-pdb/config.yaml => output/tsv/chembl_target-pdb.tsv +< 2023-12-01T18:05:19 chembl_target-pdb +togoid-config config/chembl_target-pdb update +# Success: output/tsv/chembl_target-pdb.tsv is updated +> 2023-12-01T18:05:20 chembl_target-pdb +### Update TSV for chembl_target-pfam if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-pfam.tsv is newer than config/chembl_target-pfam/config.yaml # File output/tsv/chembl_target-pfam.tsv has no timestamp file -# File output/tsv/chembl_target-pfam.tsv is created 2.6793359942953936 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_target-pfam.tsv -### Update TSV for chembl_target-reactome_pathway if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_target-pfam.tsv is created 6.977555753302801 days ago (will be updated when >5 days) +## Update config/chembl_target-pfam/config.yaml => output/tsv/chembl_target-pfam.tsv +< 2023-12-01T18:05:20 chembl_target-pfam +togoid-config config/chembl_target-pfam update +# Success: output/tsv/chembl_target-pfam.tsv is updated +> 2023-12-01T18:05:20 chembl_target-pfam +### Update TSV for chembl_target-reactome_pathway if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-reactome_pathway.tsv is newer than config/chembl_target-reactome_pathway/config.yaml # File output/tsv/chembl_target-reactome_pathway.tsv has no timestamp file -# File output/tsv/chembl_target-reactome_pathway.tsv is created 2.679320452516667 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_target-reactome_pathway.tsv -### Update TSV for chembl_target-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_target-reactome_pathway.tsv is created 6.977545339383623 days ago (will be updated when >5 days) +## Update config/chembl_target-reactome_pathway/config.yaml => output/tsv/chembl_target-reactome_pathway.tsv +< 2023-12-01T18:05:20 chembl_target-reactome_pathway +togoid-config config/chembl_target-reactome_pathway update +# Success: output/tsv/chembl_target-reactome_pathway.tsv is updated +> 2023-12-01T18:05:21 chembl_target-reactome_pathway +### Update TSV for chembl_target-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/chembl_target-uniprot.tsv is newer than config/chembl_target-uniprot/config.yaml # File output/tsv/chembl_target-uniprot.tsv has no timestamp file -# File output/tsv/chembl_target-uniprot.tsv is created 2.6790568145446527 days ago (will be updated when >5 days) -# => Preserving output/tsv/chembl_target-uniprot.tsv -### Update TSV for clinvar-medgen if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/chembl_target-uniprot.tsv is created 6.977286904574224 days ago (will be updated when >5 days) +## Update config/chembl_target-uniprot/config.yaml => output/tsv/chembl_target-uniprot.tsv +< 2023-12-01T18:05:21 chembl_target-uniprot +togoid-config config/chembl_target-uniprot update +# Success: output/tsv/chembl_target-uniprot.tsv is updated +> 2023-12-01T18:05:29 chembl_target-uniprot +### Update TSV for clinvar-medgen if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/clinvar-medgen.tsv is newer than config/clinvar-medgen/config.yaml # File output/tsv/clinvar-medgen.tsv has no timestamp file -# File output/tsv/clinvar-medgen.tsv is created 2.6790429202340165 days ago (will be updated when >5 days) -# => Preserving output/tsv/clinvar-medgen.tsv +# File output/tsv/clinvar-medgen.tsv is created 6.977369935338553 days ago (will be updated when >5 days) +## Update config/clinvar-medgen/config.yaml => output/tsv/clinvar-medgen.tsv +< 2023-12-01T18:05:29 clinvar-medgen +togoid-config config/clinvar-medgen update +# Success: output/tsv/clinvar-medgen.tsv is updated +> 2023-12-01T18:05:30 clinvar-medgen ### Update TSV for cog-insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/cog-insdc.tsv is newer than config/cog-insdc/config.yaml # File output/tsv/cog-insdc.tsv is newer than input/cog/download.lock @@ -478,589 +496,288 @@ togoid-config config/chembl_target-ensembl_gene update # File output/tsv/cog-refseq_protein.tsv is newer than config/cog-refseq_protein/config.yaml # File output/tsv/cog-refseq_protein.tsv is newer than input/cog/download.lock # => Preserving output/tsv/cog-refseq_protein.tsv -### Update TSV for doid-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +### Update TSV for doid-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/doid-mesh.tsv is newer than config/doid-mesh/config.yaml # File output/tsv/doid-mesh.tsv has no timestamp file -# File output/tsv/doid-mesh.tsv is created 2.679036811333079 days ago (will be updated when >5 days) -# => Preserving output/tsv/doid-mesh.tsv -### Update TSV for doid-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/doid-mesh.tsv is created 6.977376610978924 days ago (will be updated when >5 days) +## Update config/doid-mesh/config.yaml => output/tsv/doid-mesh.tsv +< 2023-12-01T18:05:30 doid-mesh +togoid-config config/doid-mesh update +# Success: output/tsv/doid-mesh.tsv is updated +> 2023-12-01T18:05:31 doid-mesh +### Update TSV for doid-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/doid-ncit_disease.tsv is newer than config/doid-ncit_disease/config.yaml # File output/tsv/doid-ncit_disease.tsv has no timestamp file -# File output/tsv/doid-ncit_disease.tsv is created 2.6790303353931133 days ago (will be updated when >5 days) -# => Preserving output/tsv/doid-ncit_disease.tsv -### Update TSV for doid-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/doid-ncit_disease.tsv is created 6.977375110606921 days ago (will be updated when >5 days) +## Update config/doid-ncit_disease/config.yaml => output/tsv/doid-ncit_disease.tsv +< 2023-12-01T18:05:31 doid-ncit_disease +togoid-config config/doid-ncit_disease update +# Success: output/tsv/doid-ncit_disease.tsv is updated +> 2023-12-01T18:05:31 doid-ncit_disease +### Update TSV for doid-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/doid-omim_phenotype.tsv is newer than config/doid-omim_phenotype/config.yaml # File output/tsv/doid-omim_phenotype.tsv has no timestamp file -# File output/tsv/doid-omim_phenotype.tsv is created 2.6790238081320137 days ago (will be updated when >5 days) -# => Preserving output/tsv/doid-omim_phenotype.tsv -### Update TSV for ensembl_gene-affy_probeset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/doid-omim_phenotype.tsv is created 6.97737333006382 days ago (will be updated when >5 days) +## Update config/doid-omim_phenotype/config.yaml => output/tsv/doid-omim_phenotype.tsv +< 2023-12-01T18:05:31 doid-omim_phenotype +togoid-config config/doid-omim_phenotype update +# Success: output/tsv/doid-omim_phenotype.tsv is updated +> 2023-12-01T18:05:32 doid-omim_phenotype +### Update TSV for ensembl_gene-affy_probeset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-affy_probeset.tsv is newer than config/ensembl_gene-affy_probeset/config.yaml # File output/tsv/ensembl_gene-affy_probeset.tsv has no timestamp file -# File output/tsv/ensembl_gene-affy_probeset.tsv is created 2.6757301646894445 days ago (will be updated when >5 days) -# => Preserving output/tsv/ensembl_gene-affy_probeset.tsv -### Update TSV for ensembl_gene-ensembl_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/ensembl_gene-affy_probeset.tsv is created 6.974084182425278 days ago (will be updated when >5 days) +## Update config/ensembl_gene-affy_probeset/config.yaml => output/tsv/ensembl_gene-affy_probeset.tsv +< 2023-12-01T18:05:32 ensembl_gene-affy_probeset +togoid-config config/ensembl_gene-affy_probeset update +# Success: output/tsv/ensembl_gene-affy_probeset.tsv is updated +> 2023-12-01T18:06:48 ensembl_gene-affy_probeset +### Update TSV for ensembl_gene-ensembl_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-ensembl_protein.tsv is newer than config/ensembl_gene-ensembl_protein/config.yaml # File output/tsv/ensembl_gene-ensembl_protein.tsv has no timestamp file -# File output/tsv/ensembl_gene-ensembl_protein.tsv is created 2.6673760092182985 days ago (will be updated when >5 days) -# => Preserving output/tsv/ensembl_gene-ensembl_protein.tsv -### Update TSV for ensembl_gene-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/ensembl_gene-ensembl_protein.tsv is created 6.96661425512434 days ago (will be updated when >5 days) +## Update config/ensembl_gene-ensembl_protein/config.yaml => output/tsv/ensembl_gene-ensembl_protein.tsv +< 2023-12-01T18:06:48 ensembl_gene-ensembl_protein +togoid-config config/ensembl_gene-ensembl_protein update +# Success: output/tsv/ensembl_gene-ensembl_protein.tsv is updated +> 2023-12-01T18:08:35 ensembl_gene-ensembl_protein +### Update TSV for ensembl_gene-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-ensembl_transcript.tsv is newer than config/ensembl_gene-ensembl_transcript/config.yaml # File output/tsv/ensembl_gene-ensembl_transcript.tsv has no timestamp file -# File output/tsv/ensembl_gene-ensembl_transcript.tsv is created 2.658972310380775 days ago (will be updated when >5 days) -# => Preserving output/tsv/ensembl_gene-ensembl_transcript.tsv -### Update TSV for ensembl_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/ensembl_gene-ensembl_transcript.tsv is created 6.959451210217615 days ago (will be updated when >5 days) +## Update config/ensembl_gene-ensembl_transcript/config.yaml => output/tsv/ensembl_gene-ensembl_transcript.tsv +< 2023-12-01T18:08:35 ensembl_gene-ensembl_transcript +togoid-config config/ensembl_gene-ensembl_transcript update +# Success: output/tsv/ensembl_gene-ensembl_transcript.tsv is updated +> 2023-12-01T18:10:35 ensembl_gene-ensembl_transcript +### Update TSV for ensembl_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-hgnc.tsv is newer than config/ensembl_gene-hgnc/config.yaml # File output/tsv/ensembl_gene-hgnc.tsv has no timestamp file -# File output/tsv/ensembl_gene-hgnc.tsv is created 2.6589472233266203 days ago (will be updated when >5 days) -# => Preserving output/tsv/ensembl_gene-hgnc.tsv -### Update TSV for ensembl_gene-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/ensembl_gene-hgnc.tsv is created 6.960818812617778 days ago (will be updated when >5 days) +## Update config/ensembl_gene-hgnc/config.yaml => output/tsv/ensembl_gene-hgnc.tsv +< 2023-12-01T18:10:35 ensembl_gene-hgnc +togoid-config config/ensembl_gene-hgnc update +# Success: output/tsv/ensembl_gene-hgnc.tsv is updated +> 2023-12-01T18:10:36 ensembl_gene-hgnc +### Update TSV for ensembl_gene-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-ncbigene.tsv is newer than config/ensembl_gene-ncbigene/config.yaml # File output/tsv/ensembl_gene-ncbigene.tsv has no timestamp file -# File output/tsv/ensembl_gene-ncbigene.tsv is created 2.6552245244579744 days ago (will be updated when >5 days) -# => Preserving output/tsv/ensembl_gene-ncbigene.tsv -### Update TSV for ensembl_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false +# File output/tsv/ensembl_gene-ncbigene.tsv is created 6.957101192610463 days ago (will be updated when >5 days) +## Update config/ensembl_gene-ncbigene/config.yaml => output/tsv/ensembl_gene-ncbigene.tsv +< 2023-12-01T18:10:36 ensembl_gene-ncbigene +togoid-config config/ensembl_gene-ncbigene update +# Success: output/tsv/ensembl_gene-ncbigene.tsv is updated +> 2023-12-01T18:11:57 ensembl_gene-ncbigene +### Update TSV for ensembl_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_gene-uniprot.tsv is newer than config/ensembl_gene-uniprot/config.yaml # File output/tsv/ensembl_gene-uniprot.tsv has no timestamp file -# File output/tsv/ensembl_gene-uniprot.tsv is created 2.6472809566466204 days ago (will be updated when >5 days) -# => Preserving output/tsv/ensembl_gene-uniprot.tsv +# File output/tsv/ensembl_gene-uniprot.tsv is created 6.950097719150069 days ago (will be updated when >5 days) +## Update config/ensembl_gene-uniprot/config.yaml => output/tsv/ensembl_gene-uniprot.tsv +< 2023-12-01T18:11:57 ensembl_gene-uniprot +togoid-config config/ensembl_gene-uniprot update +# Success: output/tsv/ensembl_gene-uniprot.tsv is updated +> 2023-12-01T18:14:25 ensembl_gene-uniprot ### Update TSV for ensembl_protein-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_protein-ensembl_transcript.tsv is newer than config/ensembl_protein-ensembl_transcript/config.yaml # File output/tsv/ensembl_protein-ensembl_transcript.tsv has no timestamp file -# File output/tsv/ensembl_protein-ensembl_transcript.tsv is created 9.427918621080428 days ago (will be updated when >5 days) +# File output/tsv/ensembl_protein-ensembl_transcript.tsv is created 13.7324492590117 days ago (will be updated when >5 days) ## Update config/ensembl_protein-ensembl_transcript/config.yaml => output/tsv/ensembl_protein-ensembl_transcript.tsv -< 2023-11-27T10:55:54 ensembl_protein-ensembl_transcript +< 2023-12-01T18:14:25 ensembl_protein-ensembl_transcript togoid-config config/ensembl_protein-ensembl_transcript update -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv new file size per old 67456 / 463730916 = 0.0001454636679862854 < 0.5 -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_protein-ensembl_transcript.tsv seems to contain HTML -# Failure: output/tsv/ensembl_protein-ensembl_transcript.tsv is not updated -> 2023-11-27T10:56:42 ensembl_protein-ensembl_transcript +# Success: output/tsv/ensembl_protein-ensembl_transcript.tsv is updated +> 2023-12-01T18:26:32 ensembl_protein-ensembl_transcript ### Update TSV for ensembl_transcript-affy_probeset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_transcript-affy_probeset.tsv is newer than config/ensembl_transcript-affy_probeset/config.yaml # File output/tsv/ensembl_transcript-affy_probeset.tsv has no timestamp file -# File output/tsv/ensembl_transcript-affy_probeset.tsv is created 9.426040675974642 days ago (will be updated when >5 days) +# File output/tsv/ensembl_transcript-affy_probeset.tsv is created 13.73842131799612 days ago (will be updated when >5 days) ## Update config/ensembl_transcript-affy_probeset/config.yaml => output/tsv/ensembl_transcript-affy_probeset.tsv -< 2023-11-27T10:56:42 ensembl_transcript-affy_probeset +< 2023-12-01T18:26:32 ensembl_transcript-affy_probeset togoid-config config/ensembl_transcript-affy_probeset update -# Error: output/tsv/ensembl_transcript-affy_probeset.tsv new file size per old 0 / 5921737 = 0.0 < 0.5 -# Error: Failed to create output/tsv/ensembl_transcript-affy_probeset.tsv or created file was empty -# Failure: output/tsv/ensembl_transcript-affy_probeset.tsv is not updated -> 2023-11-27T10:56:43 ensembl_transcript-affy_probeset -### Update TSV for ensembl_transcript-go if check_tsv_filesize true or check_config_timestamp false or check_tsv_timestamp false +# Success: output/tsv/ensembl_transcript-affy_probeset.tsv is updated +> 2023-12-01T18:27:45 ensembl_transcript-affy_probeset +### Update TSV for ensembl_transcript-go if check_tsv_filesize true or check_config_timestamp false or check_tsv_timestamp true ## Update config/ensembl_transcript-go/config.yaml => output/tsv/ensembl_transcript-go.tsv -< 2023-11-27T10:56:43 ensembl_transcript-go +< 2023-12-01T18:27:45 ensembl_transcript-go togoid-config config/ensembl_transcript-go update -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-go.tsv seems to contain HTML -# Failure: output/tsv/ensembl_transcript-go.tsv is not updated -> 2023-11-27T10:57:32 ensembl_transcript-go +# Success: output/tsv/ensembl_transcript-go.tsv is updated +> 2023-12-02T01:51:21 ensembl_transcript-go ### Update TSV for ensembl_transcript-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_transcript-hgnc.tsv is newer than config/ensembl_transcript-hgnc/config.yaml # File output/tsv/ensembl_transcript-hgnc.tsv has no timestamp file -# File output/tsv/ensembl_transcript-hgnc.tsv is created 9.423930146598357 days ago (will be updated when >5 days) +# File output/tsv/ensembl_transcript-hgnc.tsv is created 14.044637406904828 days ago (will be updated when >5 days) ## Update config/ensembl_transcript-hgnc/config.yaml => output/tsv/ensembl_transcript-hgnc.tsv -< 2023-11-27T10:57:32 ensembl_transcript-hgnc +< 2023-12-02T01:51:21 ensembl_transcript-hgnc togoid-config config/ensembl_transcript-hgnc update -# Error: output/tsv/ensembl_transcript-hgnc.tsv new file size per old 248 / 4752880 = 5.217888943125011e-05 < 0.5 -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-hgnc.tsv seems to contain HTML -# Failure: output/tsv/ensembl_transcript-hgnc.tsv is not updated -> 2023-11-27T10:57:32 ensembl_transcript-hgnc +# Success: output/tsv/ensembl_transcript-hgnc.tsv is updated +> 2023-12-02T01:51:27 ensembl_transcript-hgnc ### Update TSV for ensembl_transcript-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ensembl_transcript-refseq_rna.tsv is newer than config/ensembl_transcript-refseq_rna/config.yaml # File output/tsv/ensembl_transcript-refseq_rna.tsv has no timestamp file -# File output/tsv/ensembl_transcript-refseq_rna.tsv is created 9.422885316374318 days ago (will be updated when >5 days) +# File output/tsv/ensembl_transcript-refseq_rna.tsv is created 14.043656764925021 days ago (will be updated when >5 days) ## Update config/ensembl_transcript-refseq_rna/config.yaml => output/tsv/ensembl_transcript-refseq_rna.tsv -< 2023-11-27T10:57:32 ensembl_transcript-refseq_rna +< 2023-12-02T01:51:27 ensembl_transcript-refseq_rna togoid-config config/ensembl_transcript-refseq_rna update -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv new file size per old 67456 / 324577782 = 0.00020782691774016743 < 0.5 -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/ensembl_transcript-refseq_rna.tsv seems to contain HTML -# Failure: output/tsv/ensembl_transcript-refseq_rna.tsv is not updated -> 2023-11-27T10:58:22 ensembl_transcript-refseq_rna +# Success: output/tsv/ensembl_transcript-refseq_rna.tsv is updated +> 2023-12-02T02:05:36 ensembl_transcript-refseq_rna ### Update TSV for gea-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/gea-bioproject.tsv is newer than config/gea-bioproject/config.yaml # File output/tsv/gea-bioproject.tsv has no timestamp file -# File output/tsv/gea-bioproject.tsv is created 9.423460743582002 days ago (will be updated when >5 days) +# File output/tsv/gea-bioproject.tsv is created 14.053484258726552 days ago (will be updated when >5 days) ## Update config/gea-bioproject/config.yaml => output/tsv/gea-bioproject.tsv -< 2023-11-27T10:58:22 gea-bioproject +< 2023-12-02T02:05:36 gea-bioproject togoid-config config/gea-bioproject update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/gea-bioproject.tsv new file size per old 0 / 3032 = 0.0 < 0.5 -# Error: Failed to create output/tsv/gea-bioproject.tsv or created file was empty -# Failure: output/tsv/gea-bioproject.tsv is not updated -> 2023-11-27T11:00:30 gea-bioproject +# Success: output/tsv/gea-bioproject.tsv is updated +> 2023-12-02T02:05:37 gea-bioproject ### Update TSV for gea-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/gea-biosample.tsv is newer than config/gea-biosample/config.yaml # File output/tsv/gea-biosample.tsv has no timestamp file -# File output/tsv/gea-biosample.tsv is created 9.424930095768808 days ago (will be updated when >5 days) +# File output/tsv/gea-biosample.tsv is created 14.053485015192544 days ago (will be updated when >5 days) ## Update config/gea-biosample/config.yaml => output/tsv/gea-biosample.tsv -< 2023-11-27T11:00:30 gea-biosample +< 2023-12-02T02:05:37 gea-biosample togoid-config config/gea-biosample update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/gea-biosample.tsv new file size per old 0 / 121104 = 0.0 < 0.5 -# Error: Failed to create output/tsv/gea-biosample.tsv or created file was empty -# Failure: output/tsv/gea-biosample.tsv is not updated -> 2023-11-27T11:02:37 gea-biosample -### Update TSV for glytoucan-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# Success: output/tsv/gea-biosample.tsv is updated +> 2023-12-02T02:05:37 gea-biosample +### Update TSV for glytoucan-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/glytoucan-doid.tsv is newer than config/glytoucan-doid/config.yaml # File output/tsv/glytoucan-doid.tsv has no timestamp file -# File output/tsv/glytoucan-doid.tsv is created 9.426326071543357 days ago (will be updated when >5 days) -## Update config/glytoucan-doid/config.yaml => output/tsv/glytoucan-doid.tsv -< 2023-11-27T11:02:37 glytoucan-doid -togoid-config config/glytoucan-doid update -# Success: output/tsv/glytoucan-doid.tsv is updated -> 2023-11-27T11:03:07 glytoucan-doid -### Update TSV for glytoucan-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/glytoucan-doid.tsv is created 4.626732540853634 days ago (will be updated when >5 days) +# => Preserving output/tsv/glytoucan-doid.tsv +### Update TSV for glytoucan-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/glytoucan-ncbigene.tsv is newer than config/glytoucan-ncbigene/config.yaml # File output/tsv/glytoucan-ncbigene.tsv has no timestamp file -# File output/tsv/glytoucan-ncbigene.tsv is created 9.426668090357685 days ago (will be updated when >5 days) -## Update config/glytoucan-ncbigene/config.yaml => output/tsv/glytoucan-ncbigene.tsv -< 2023-11-27T11:03:08 glytoucan-ncbigene -togoid-config config/glytoucan-ncbigene update -# Success: output/tsv/glytoucan-ncbigene.tsv is updated -> 2023-11-27T11:03:08 glytoucan-ncbigene -### Update TSV for glytoucan-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/glytoucan-ncbigene.tsv is created 4.626722772765995 days ago (will be updated when >5 days) +# => Preserving output/tsv/glytoucan-ncbigene.tsv +### Update TSV for glytoucan-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/glytoucan-uniprot.tsv is newer than config/glytoucan-uniprot/config.yaml # File output/tsv/glytoucan-uniprot.tsv has no timestamp file -# File output/tsv/glytoucan-uniprot.tsv is created 9.426664421010614 days ago (will be updated when >5 days) -## Update config/glytoucan-uniprot/config.yaml => output/tsv/glytoucan-uniprot.tsv -< 2023-11-27T11:03:08 glytoucan-uniprot -togoid-config config/glytoucan-uniprot update -# Success: output/tsv/glytoucan-uniprot.tsv is updated -> 2023-11-27T11:03:10 glytoucan-uniprot +# File output/tsv/glytoucan-uniprot.tsv is created 4.62670709434125 days ago (will be updated when >5 days) +# => Preserving output/tsv/glytoucan-uniprot.tsv ### Update TSV for hgnc-ccds if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ccds.tsv is newer than config/hgnc-ccds/config.yaml # File output/tsv/hgnc-ccds.tsv has no timestamp file -# File output/tsv/hgnc-ccds.tsv is created 9.426674031980973 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ccds.tsv is created 14.053381020911827 days ago (will be updated when >5 days) ## Update config/hgnc-ccds/config.yaml => output/tsv/hgnc-ccds.tsv -< 2023-11-27T11:03:10 hgnc-ccds +< 2023-12-02T02:05:37 hgnc-ccds togoid-config config/hgnc-ccds update -# Error: output/tsv/hgnc-ccds.tsv new file size per old 248 / 540016 = 0.00045924565198068206 < 0.5 -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ccds.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ccds.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML -# Failure: output/tsv/hgnc-ccds.tsv is not updated -> 2023-11-27T11:03:10 hgnc-ccds +# Success: output/tsv/hgnc-ccds.tsv is updated +> 2023-12-02T02:05:38 hgnc-ccds ### Update TSV for hgnc-ec if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ec.tsv is newer than config/hgnc-ec/config.yaml # File output/tsv/hgnc-ec.tsv has no timestamp file -# File output/tsv/hgnc-ec.tsv is created 9.426673217639154 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ec.tsv is created 14.053387477072963 days ago (will be updated when >5 days) ## Update config/hgnc-ec/config.yaml => output/tsv/hgnc-ec.tsv -< 2023-11-27T11:03:10 hgnc-ec +< 2023-12-02T02:05:38 hgnc-ec togoid-config config/hgnc-ec update -# Error: output/tsv/hgnc-ec.tsv new file size per old 248 / 28390 = 0.00873547023599859 < 0.5 -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ec.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ec.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ec.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ec.tsv seems to contain HTML -# Failure: output/tsv/hgnc-ec.tsv is not updated -> 2023-11-27T11:03:11 hgnc-ec +# Success: output/tsv/hgnc-ec.tsv is updated +> 2023-12-02T02:05:39 hgnc-ec ### Update TSV for hgnc-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ensembl_gene.tsv is newer than config/hgnc-ensembl_gene/config.yaml # File output/tsv/hgnc-ensembl_gene.tsv has no timestamp file -# File output/tsv/hgnc-ensembl_gene.tsv is created 9.42667458534545 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ensembl_gene.tsv is created 14.05338638367683 days ago (will be updated when >5 days) ## Update config/hgnc-ensembl_gene/config.yaml => output/tsv/hgnc-ensembl_gene.tsv -< 2023-11-27T11:03:11 hgnc-ensembl_gene +< 2023-12-02T02:05:39 hgnc-ensembl_gene togoid-config config/hgnc-ensembl_gene update -# Error: output/tsv/hgnc-ensembl_gene.tsv new file size per old 248 / 893375 = 0.0002775989925843011 < 0.5 -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ensembl_gene.tsv seems to contain HTML -# Failure: output/tsv/hgnc-ensembl_gene.tsv is not updated -> 2023-11-27T11:03:11 hgnc-ensembl_gene +# Success: output/tsv/hgnc-ensembl_gene.tsv is updated +> 2023-12-02T02:05:40 hgnc-ensembl_gene ### Update TSV for hgnc-hgnc_symbol if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-hgnc_symbol.tsv is newer than config/hgnc-hgnc_symbol/config.yaml # File output/tsv/hgnc-hgnc_symbol.tsv has no timestamp file -# File output/tsv/hgnc-hgnc_symbol.tsv is created 9.426674101799525 days ago (will be updated when >5 days) +# File output/tsv/hgnc-hgnc_symbol.tsv is created 14.053395184375775 days ago (will be updated when >5 days) ## Update config/hgnc-hgnc_symbol/config.yaml => output/tsv/hgnc-hgnc_symbol.tsv -< 2023-11-27T11:03:11 hgnc-hgnc_symbol +< 2023-12-02T02:05:40 hgnc-hgnc_symbol togoid-config config/hgnc-hgnc_symbol update -# Error: output/tsv/hgnc-hgnc_symbol.tsv new file size per old 248 / 596189 = 0.00041597547086578247 < 0.5 -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-hgnc_symbol.tsv seems to contain HTML -# Failure: output/tsv/hgnc-hgnc_symbol.tsv is not updated -> 2023-11-27T11:03:11 hgnc-hgnc_symbol +# Success: output/tsv/hgnc-hgnc_symbol.tsv is updated +> 2023-12-02T02:05:41 hgnc-hgnc_symbol ### Update TSV for hgnc-insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-insdc.tsv is newer than config/hgnc-insdc/config.yaml # File output/tsv/hgnc-insdc.tsv has no timestamp file -# File output/tsv/hgnc-insdc.tsv is created 9.426673856954375 days ago (will be updated when >5 days) +# File output/tsv/hgnc-insdc.tsv is created 14.053399660168184 days ago (will be updated when >5 days) ## Update config/hgnc-insdc/config.yaml => output/tsv/hgnc-insdc.tsv -< 2023-11-27T11:03:11 hgnc-insdc +< 2023-12-02T02:05:41 hgnc-insdc togoid-config config/hgnc-insdc update -# Error: output/tsv/hgnc-insdc.tsv new file size per old 248 / 301258 = 0.0008232146532208273 < 0.5 -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-insdc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-insdc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-insdc.tsv seems to contain HTML -# Failure: output/tsv/hgnc-insdc.tsv is not updated -> 2023-11-27T11:03:12 hgnc-insdc +# Success: output/tsv/hgnc-insdc.tsv is updated +> 2023-12-02T02:05:41 hgnc-insdc ### Update TSV for hgnc-lrg if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-lrg.tsv is newer than config/hgnc-lrg/config.yaml # File output/tsv/hgnc-lrg.tsv has no timestamp file -# File output/tsv/hgnc-lrg.tsv is created 9.426673939550984 days ago (will be updated when >5 days) +# File output/tsv/hgnc-lrg.tsv is created 14.053402259796192 days ago (will be updated when >5 days) ## Update config/hgnc-lrg/config.yaml => output/tsv/hgnc-lrg.tsv -< 2023-11-27T11:03:12 hgnc-lrg +< 2023-12-02T02:05:41 hgnc-lrg togoid-config config/hgnc-lrg update -# Error: output/tsv/hgnc-lrg.tsv new file size per old 248 / 17966 = 0.013803851719915395 < 0.5 -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-lrg.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-lrg.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-lrg.tsv seems to contain HTML -# Failure: output/tsv/hgnc-lrg.tsv is not updated -> 2023-11-27T11:03:12 hgnc-lrg +# Success: output/tsv/hgnc-lrg.tsv is updated +> 2023-12-02T02:05:42 hgnc-lrg ### Update TSV for hgnc-mgi_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-mgi_gene.tsv is newer than config/hgnc-mgi_gene/config.yaml # File output/tsv/hgnc-mgi_gene.tsv has no timestamp file -# File output/tsv/hgnc-mgi_gene.tsv is created 9.42667354481081 days ago (will be updated when >5 days) +# File output/tsv/hgnc-mgi_gene.tsv is created 14.05340181600272 days ago (will be updated when >5 days) ## Update config/hgnc-mgi_gene/config.yaml => output/tsv/hgnc-mgi_gene.tsv -< 2023-11-27T11:03:12 hgnc-mgi_gene +< 2023-12-02T02:05:42 hgnc-mgi_gene togoid-config config/hgnc-mgi_gene update -# Error: output/tsv/hgnc-mgi_gene.tsv new file size per old 248 / 311534 = 0.0007960607830926962 < 0.5 -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mgi_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mgi_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mgi_gene.tsv seems to contain HTML -# Failure: output/tsv/hgnc-mgi_gene.tsv is not updated -> 2023-11-27T11:03:13 hgnc-mgi_gene +# Success: output/tsv/hgnc-mgi_gene.tsv is updated +> 2023-12-02T02:05:42 hgnc-mgi_gene ### Update TSV for hgnc-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-mirbase.tsv is newer than config/hgnc-mirbase/config.yaml # File output/tsv/hgnc-mirbase.tsv has no timestamp file -# File output/tsv/hgnc-mirbase.tsv is created 9.426680261293056 days ago (will be updated when >5 days) +# File output/tsv/hgnc-mirbase.tsv is created 14.053405157497535 days ago (will be updated when >5 days) ## Update config/hgnc-mirbase/config.yaml => output/tsv/hgnc-mirbase.tsv -< 2023-11-27T11:03:13 hgnc-mirbase +< 2023-12-02T02:05:42 hgnc-mirbase togoid-config config/hgnc-mirbase update -# Error: output/tsv/hgnc-mirbase.tsv new file size per old 248 / 30592 = 0.008106694560669456 < 0.5 -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mirbase.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-mirbase.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-mirbase.tsv seems to contain HTML -# Failure: output/tsv/hgnc-mirbase.tsv is not updated -> 2023-11-27T11:03:14 hgnc-mirbase +# Success: output/tsv/hgnc-mirbase.tsv is updated +> 2023-12-02T02:05:43 hgnc-mirbase ### Update TSV for hgnc-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-ncbigene.tsv is newer than config/hgnc-ncbigene/config.yaml # File output/tsv/hgnc-ncbigene.tsv has no timestamp file -# File output/tsv/hgnc-ncbigene.tsv is created 9.42667891205147 days ago (will be updated when >5 days) +# File output/tsv/hgnc-ncbigene.tsv is created 14.053404174365706 days ago (will be updated when >5 days) ## Update config/hgnc-ncbigene/config.yaml => output/tsv/hgnc-ncbigene.tsv -< 2023-11-27T11:03:14 hgnc-ncbigene +< 2023-12-02T02:05:43 hgnc-ncbigene togoid-config config/hgnc-ncbigene update -# Error: output/tsv/hgnc-ncbigene.tsv new file size per old 248 / 583534 = 0.00042499665829240455 < 0.5 -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-ncbigene.tsv seems to contain HTML -# Failure: output/tsv/hgnc-ncbigene.tsv is not updated -> 2023-11-27T11:03:14 hgnc-ncbigene +# Success: output/tsv/hgnc-ncbigene.tsv is updated +> 2023-12-02T02:05:44 hgnc-ncbigene ### Update TSV for hgnc-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-omim_gene.tsv is newer than config/hgnc-omim_gene/config.yaml # File output/tsv/hgnc-omim_gene.tsv has no timestamp file -# File output/tsv/hgnc-omim_gene.tsv is created 9.426677994638784 days ago (will be updated when >5 days) +# File output/tsv/hgnc-omim_gene.tsv is created 14.053409729661562 days ago (will be updated when >5 days) ## Update config/hgnc-omim_gene/config.yaml => output/tsv/hgnc-omim_gene.tsv -< 2023-11-27T11:03:14 hgnc-omim_gene +< 2023-12-02T02:05:44 hgnc-omim_gene togoid-config config/hgnc-omim_gene update -# Error: output/tsv/hgnc-omim_gene.tsv new file size per old 248 / 213543 = 0.0011613586022487274 < 0.5 -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-omim_gene.tsv seems to contain HTML -# Failure: output/tsv/hgnc-omim_gene.tsv is not updated -> 2023-11-27T11:03:15 hgnc-omim_gene +# Success: output/tsv/hgnc-omim_gene.tsv is updated +> 2023-12-02T02:05:44 hgnc-omim_gene ### Update TSV for hgnc-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-pubmed.tsv is newer than config/hgnc-pubmed/config.yaml # File output/tsv/hgnc-pubmed.tsv has no timestamp file -# File output/tsv/hgnc-pubmed.tsv is created 9.426680002267998 days ago (will be updated when >5 days) +# File output/tsv/hgnc-pubmed.tsv is created 14.053412174569525 days ago (will be updated when >5 days) ## Update config/hgnc-pubmed/config.yaml => output/tsv/hgnc-pubmed.tsv -< 2023-11-27T11:03:15 hgnc-pubmed +< 2023-12-02T02:05:44 hgnc-pubmed togoid-config config/hgnc-pubmed update -# Error: output/tsv/hgnc-pubmed.tsv new file size per old 248 / 484788 = 0.0005115638175862439 < 0.5 -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-pubmed.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-pubmed.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML -# Failure: output/tsv/hgnc-pubmed.tsv is not updated -> 2023-11-27T11:03:15 hgnc-pubmed +# Success: output/tsv/hgnc-pubmed.tsv is updated +> 2023-12-02T02:05:45 hgnc-pubmed ### Update TSV for hgnc-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-refseq_rna.tsv is newer than config/hgnc-refseq_rna/config.yaml # File output/tsv/hgnc-refseq_rna.tsv has no timestamp file -# File output/tsv/hgnc-refseq_rna.tsv is created 9.426679627248669 days ago (will be updated when >5 days) +# File output/tsv/hgnc-refseq_rna.tsv is created 14.053417123194373 days ago (will be updated when >5 days) ## Update config/hgnc-refseq_rna/config.yaml => output/tsv/hgnc-refseq_rna.tsv -< 2023-11-27T11:03:15 hgnc-refseq_rna +< 2023-12-02T02:05:45 hgnc-refseq_rna togoid-config config/hgnc-refseq_rna update -# Error: output/tsv/hgnc-refseq_rna.tsv new file size per old 248 / 461015 = 0.0005379434508638548 < 0.5 -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-refseq_rna.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-refseq_rna.tsv seems to contain HTML -# Failure: output/tsv/hgnc-refseq_rna.tsv is not updated -> 2023-11-27T11:03:16 hgnc-refseq_rna +# Success: output/tsv/hgnc-refseq_rna.tsv is updated +> 2023-12-02T02:05:46 hgnc-refseq_rna ### Update TSV for hgnc-rgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-rgd.tsv is newer than config/hgnc-rgd/config.yaml # File output/tsv/hgnc-rgd.tsv has no timestamp file -# File output/tsv/hgnc-rgd.tsv is created 9.426683206140613 days ago (will be updated when >5 days) +# File output/tsv/hgnc-rgd.tsv is created 14.053421545787614 days ago (will be updated when >5 days) ## Update config/hgnc-rgd/config.yaml => output/tsv/hgnc-rgd.tsv -< 2023-11-27T11:03:16 hgnc-rgd +< 2023-12-02T02:05:46 hgnc-rgd togoid-config config/hgnc-rgd update -# Error: output/tsv/hgnc-rgd.tsv new file size per old 248 / 250822 = 0.0009887489933099968 < 0.5 -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-rgd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-rgd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-rgd.tsv seems to contain HTML -# Failure: output/tsv/hgnc-rgd.tsv is not updated -> 2023-11-27T11:03:16 hgnc-rgd +# Success: output/tsv/hgnc-rgd.tsv is updated +> 2023-12-02T02:05:47 hgnc-rgd ### Update TSV for hgnc-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hgnc-uniprot.tsv is newer than config/hgnc-uniprot/config.yaml # File output/tsv/hgnc-uniprot.tsv has no timestamp file -# File output/tsv/hgnc-uniprot.tsv is created 9.42668294377875 days ago (will be updated when >5 days) +# File output/tsv/hgnc-uniprot.tsv is created 14.053422931237478 days ago (will be updated when >5 days) ## Update config/hgnc-uniprot/config.yaml => output/tsv/hgnc-uniprot.tsv -< 2023-11-27T11:03:16 hgnc-uniprot +< 2023-12-02T02:05:47 hgnc-uniprot togoid-config config/hgnc-uniprot update -# Error: output/tsv/hgnc-uniprot.tsv new file size per old 248 / 259333 = 0.0009562994296907837 < 0.5 -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/hgnc-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/hgnc-uniprot.tsv seems to contain HTML -# Failure: output/tsv/hgnc-uniprot.tsv is not updated -> 2023-11-27T11:03:17 hgnc-uniprot +# Success: output/tsv/hgnc-uniprot.tsv is updated +> 2023-12-02T02:05:47 hgnc-uniprot ### Update TSV for hmdb-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/hmdb-chebi.tsv is newer than config/hmdb-chebi/config.yaml # File output/tsv/hmdb-chebi.tsv is newer than input/hmdb/download.lock @@ -1084,14 +801,12 @@ togoid-config config/hgnc-uniprot update ### Update TSV for hp_inheritance-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/hp_inheritance-omim_phenotype.tsv is newer than config/hp_inheritance-omim_phenotype/config.yaml # File output/tsv/hp_inheritance-omim_phenotype.tsv has no timestamp file -# File output/tsv/hp_inheritance-omim_phenotype.tsv is created 9.426685311259016 days ago (will be updated when >5 days) +# File output/tsv/hp_inheritance-omim_phenotype.tsv is created 14.053418244728622 days ago (will be updated when >5 days) ## Update config/hp_inheritance-omim_phenotype/config.yaml => output/tsv/hp_inheritance-omim_phenotype.tsv -< 2023-11-27T11:03:18 hp_inheritance-omim_phenotype +< 2023-12-02T02:05:47 hp_inheritance-omim_phenotype togoid-config config/hp_inheritance-omim_phenotype update -# Error: output/tsv/hp_inheritance-omim_phenotype.tsv new file size per old 0 / 129900 = 0.0 < 0.5 -# Error: Failed to create output/tsv/hp_inheritance-omim_phenotype.tsv or created file was empty -# Failure: output/tsv/hp_inheritance-omim_phenotype.tsv is not updated -> 2023-11-27T11:03:19 hp_inheritance-omim_phenotype +# Success: output/tsv/hp_inheritance-omim_phenotype.tsv is updated +> 2023-12-02T02:05:48 hp_inheritance-omim_phenotype ### Update TSV for hp_phenotype-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/hp_phenotype-omim_phenotype.tsv is newer than config/hp_phenotype-omim_phenotype/config.yaml # File output/tsv/hp_phenotype-omim_phenotype.tsv is newer than input/hp_phenotype/download.lock @@ -1103,51 +818,39 @@ togoid-config config/hp_inheritance-omim_phenotype update ### Update TSV for insdc-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc-bioproject.tsv is newer than config/insdc-bioproject/config.yaml # File output/tsv/insdc-bioproject.tsv has no timestamp file -# File output/tsv/insdc-bioproject.tsv is created 9.42643919785522 days ago (will be updated when >5 days) +# File output/tsv/insdc-bioproject.tsv is created 14.05316155249205 days ago (will be updated when >5 days) ## Update config/insdc-bioproject/config.yaml => output/tsv/insdc-bioproject.tsv -< 2023-11-27T11:03:20 insdc-bioproject +< 2023-12-02T02:05:48 insdc-bioproject togoid-config config/insdc-bioproject update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/insdc-bioproject.tsv new file size per old 0 / 1191557755 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc-bioproject.tsv or created file was empty -# Failure: output/tsv/insdc-bioproject.tsv is not updated -> 2023-11-27T11:05:27 insdc-bioproject +# Success: output/tsv/insdc-bioproject.tsv is updated +> 2023-12-02T02:06:13 insdc-bioproject ### Update TSV for insdc-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc-biosample.tsv is newer than config/insdc-biosample/config.yaml # File output/tsv/insdc-biosample.tsv has no timestamp file -# File output/tsv/insdc-biosample.tsv is created 9.427004596775996 days ago (will be updated when >5 days) +# File output/tsv/insdc-biosample.tsv is created 14.052535996601378 days ago (will be updated when >5 days) ## Update config/insdc-biosample/config.yaml => output/tsv/insdc-biosample.tsv -< 2023-11-27T11:05:27 insdc-biosample +< 2023-12-02T02:06:13 insdc-biosample togoid-config config/insdc-biosample update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/insdc-biosample.tsv new file size per old 0 / 4269980335 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc-biosample.tsv or created file was empty -# Failure: output/tsv/insdc-biosample.tsv is not updated -> 2023-11-27T11:07:35 insdc-biosample +# Success: output/tsv/insdc-biosample.tsv is updated +> 2023-12-02T02:07:29 insdc-biosample ### Update TSV for insdc_master-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc_master-bioproject.tsv is newer than config/insdc_master-bioproject/config.yaml # File output/tsv/insdc_master-bioproject.tsv has no timestamp file -# File output/tsv/insdc_master-bioproject.tsv is created 9.428463490330474 days ago (will be updated when >5 days) +# File output/tsv/insdc_master-bioproject.tsv is created 14.053398398610659 days ago (will be updated when >5 days) ## Update config/insdc_master-bioproject/config.yaml => output/tsv/insdc_master-bioproject.tsv -< 2023-11-27T11:07:35 insdc_master-bioproject +< 2023-12-02T02:07:29 insdc_master-bioproject togoid-config config/insdc_master-bioproject update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/insdc_master-bioproject.tsv new file size per old 0 / 41801168 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc_master-bioproject.tsv or created file was empty -# Failure: output/tsv/insdc_master-bioproject.tsv is not updated -> 2023-11-27T11:09:42 insdc_master-bioproject +# Success: output/tsv/insdc_master-bioproject.tsv is updated +> 2023-12-02T02:07:30 insdc_master-bioproject ### Update TSV for insdc_master-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/insdc_master-biosample.tsv is newer than config/insdc_master-biosample/config.yaml # File output/tsv/insdc_master-biosample.tsv has no timestamp file -# File output/tsv/insdc_master-biosample.tsv is created 9.429920386929895 days ago (will be updated when >5 days) +# File output/tsv/insdc_master-biosample.tsv is created 14.05339687013361 days ago (will be updated when >5 days) ## Update config/insdc_master-biosample/config.yaml => output/tsv/insdc_master-biosample.tsv -< 2023-11-27T11:09:42 insdc_master-biosample +< 2023-12-02T02:07:30 insdc_master-biosample togoid-config config/insdc_master-biosample update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/insdc_master-biosample.tsv new file size per old 0 / 43765492 = 0.0 < 0.5 -# Error: Failed to create output/tsv/insdc_master-biosample.tsv or created file was empty -# Failure: output/tsv/insdc_master-biosample.tsv is not updated -> 2023-11-27T11:11:50 insdc_master-biosample +# Success: output/tsv/insdc_master-biosample.tsv is updated +> 2023-12-02T02:07:32 insdc_master-biosample ### Update TSV for interpro-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/interpro-go.tsv is newer than config/interpro-go/config.yaml # File output/tsv/interpro-go.tsv is newer than input/interpro/download.lock @@ -1183,655 +886,401 @@ curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out ### Update TSV for jga_study-jga_dataset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/jga_study-jga_dataset.tsv is newer than config/jga_study-jga_dataset/config.yaml # File output/tsv/jga_study-jga_dataset.tsv has no timestamp file -# File output/tsv/jga_study-jga_dataset.tsv is created 9.431390912282373 days ago (will be updated when >5 days) +# File output/tsv/jga_study-jga_dataset.tsv is created 14.053409095075533 days ago (will be updated when >5 days) ## Update config/jga_study-jga_dataset/config.yaml => output/tsv/jga_study-jga_dataset.tsv -< 2023-11-27T11:11:50 jga_study-jga_dataset +< 2023-12-02T02:07:32 jga_study-jga_dataset togoid-config config/jga_study-jga_dataset update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/jga_study-jga_dataset.tsv new file size per old 0 / 4378 = 0.0 < 0.5 -# Error: Failed to create output/tsv/jga_study-jga_dataset.tsv or created file was empty -# Failure: output/tsv/jga_study-jga_dataset.tsv is not updated -> 2023-11-27T11:13:57 jga_study-jga_dataset +# Success: output/tsv/jga_study-jga_dataset.tsv is updated +> 2023-12-02T02:07:32 jga_study-jga_dataset ### Update TSV for jga_study-nbdc_human_db if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/jga_study-nbdc_human_db.tsv is newer than config/jga_study-nbdc_human_db/config.yaml # File output/tsv/jga_study-nbdc_human_db.tsv has no timestamp file -# File output/tsv/jga_study-nbdc_human_db.tsv is created 9.432863622769826 days ago (will be updated when >5 days) +# File output/tsv/jga_study-nbdc_human_db.tsv is created 14.053409227074258 days ago (will be updated when >5 days) ## Update config/jga_study-nbdc_human_db/config.yaml => output/tsv/jga_study-nbdc_human_db.tsv -< 2023-11-27T11:13:57 jga_study-nbdc_human_db +< 2023-12-02T02:07:32 jga_study-nbdc_human_db togoid-config config/jga_study-nbdc_human_db update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/jga_study-nbdc_human_db.tsv new file size per old 0 / 5795 = 0.0 < 0.5 -# Error: Failed to create output/tsv/jga_study-nbdc_human_db.tsv or created file was empty -# Failure: output/tsv/jga_study-nbdc_human_db.tsv is not updated -> 2023-11-27T11:16:05 jga_study-nbdc_human_db +# Success: output/tsv/jga_study-nbdc_human_db.tsv is updated +> 2023-12-02T02:07:33 jga_study-nbdc_human_db ### Update TSV for jga_study-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/jga_study-pubmed.tsv is newer than config/jga_study-pubmed/config.yaml # File output/tsv/jga_study-pubmed.tsv has no timestamp file -# File output/tsv/jga_study-pubmed.tsv is created 9.43433412839794 days ago (will be updated when >5 days) +# File output/tsv/jga_study-pubmed.tsv is created 14.053409706673644 days ago (will be updated when >5 days) ## Update config/jga_study-pubmed/config.yaml => output/tsv/jga_study-pubmed.tsv -< 2023-11-27T11:16:05 jga_study-pubmed +< 2023-12-02T02:07:33 jga_study-pubmed togoid-config config/jga_study-pubmed update -curl: (7) Failed connect to ddbj.nig.ac.jp:443; Connection timed out -# Error: output/tsv/jga_study-pubmed.tsv new file size per old 0 / 2597 = 0.0 < 0.5 -# Error: Failed to create output/tsv/jga_study-pubmed.tsv or created file was empty -# Failure: output/tsv/jga_study-pubmed.tsv is not updated -> 2023-11-27T11:18:12 jga_study-pubmed -### Update TSV for lipidmaps-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# Success: output/tsv/jga_study-pubmed.tsv is updated +> 2023-12-02T02:07:33 jga_study-pubmed +### Update TSV for lipidmaps-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/lipidmaps-chebi.tsv is newer than config/lipidmaps-chebi/config.yaml # File output/tsv/lipidmaps-chebi.tsv has no timestamp file -# File output/tsv/lipidmaps-chebi.tsv is created 9.435776456465 days ago (will be updated when >5 days) -## Update config/lipidmaps-chebi/config.yaml => output/tsv/lipidmaps-chebi.tsv -< 2023-11-27T11:18:12 lipidmaps-chebi -togoid-config config/lipidmaps-chebi update -# Success: output/tsv/lipidmaps-chebi.tsv is updated -> 2023-11-27T11:18:17 lipidmaps-chebi -### Update TSV for lipidmaps-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/lipidmaps-chebi.tsv is created 4.61755808612441 days ago (will be updated when >5 days) +# => Preserving output/tsv/lipidmaps-chebi.tsv +### Update TSV for lipidmaps-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/lipidmaps-inchi_key.tsv is newer than config/lipidmaps-inchi_key/config.yaml # File output/tsv/lipidmaps-inchi_key.tsv has no timestamp file -# File output/tsv/lipidmaps-inchi_key.tsv is created 9.435789270107499 days ago (will be updated when >5 days) -## Update config/lipidmaps-inchi_key/config.yaml => output/tsv/lipidmaps-inchi_key.tsv -< 2023-11-27T11:18:17 lipidmaps-inchi_key -togoid-config config/lipidmaps-inchi_key update -# Success: output/tsv/lipidmaps-inchi_key.tsv is updated -> 2023-11-27T11:18:20 lipidmaps-inchi_key -### Update TSV for lipidmaps-swisslipids if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/lipidmaps-inchi_key.tsv is created 4.617519595894027 days ago (will be updated when >5 days) +# => Preserving output/tsv/lipidmaps-inchi_key.tsv +### Update TSV for lipidmaps-swisslipids if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/lipidmaps-swisslipids.tsv is newer than config/lipidmaps-swisslipids/config.yaml # File output/tsv/lipidmaps-swisslipids.tsv has no timestamp file -# File output/tsv/lipidmaps-swisslipids.tsv is created 9.43579897760125 days ago (will be updated when >5 days) -## Update config/lipidmaps-swisslipids/config.yaml => output/tsv/lipidmaps-swisslipids.tsv -< 2023-11-27T11:18:20 lipidmaps-swisslipids -togoid-config config/lipidmaps-swisslipids update -# Success: output/tsv/lipidmaps-swisslipids.tsv is updated -> 2023-11-27T11:18:22 lipidmaps-swisslipids -### Update TSV for mbgd_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/lipidmaps-swisslipids.tsv is created 4.617493178455463 days ago (will be updated when >5 days) +# => Preserving output/tsv/lipidmaps-swisslipids.tsv +### Update TSV for mbgd_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/mbgd_gene-uniprot.tsv is newer than config/mbgd_gene-uniprot/config.yaml # File output/tsv/mbgd_gene-uniprot.tsv has no timestamp file -# File output/tsv/mbgd_gene-uniprot.tsv is created 9.408020171120162 days ago (will be updated when >5 days) -## Update config/mbgd_gene-uniprot/config.yaml => output/tsv/mbgd_gene-uniprot.tsv -< 2023-11-27T11:18:22 mbgd_gene-uniprot -togoid-config config/mbgd_gene-uniprot update -# Success: output/tsv/mbgd_gene-uniprot.tsv is updated -> 2023-11-27T11:57:55 mbgd_gene-uniprot -### Update TSV for mbgd_organism-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/mbgd_gene-uniprot.tsv is created 4.590029018289885 days ago (will be updated when >5 days) +# => Preserving output/tsv/mbgd_gene-uniprot.tsv +### Update TSV for mbgd_organism-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/mbgd_organism-taxonomy.tsv is newer than config/mbgd_organism-taxonomy/config.yaml # File output/tsv/mbgd_organism-taxonomy.tsv has no timestamp file -# File output/tsv/mbgd_organism-taxonomy.tsv is created 9.435479434222524 days ago (will be updated when >5 days) -## Update config/mbgd_organism-taxonomy/config.yaml => output/tsv/mbgd_organism-taxonomy.tsv -< 2023-11-27T11:57:55 mbgd_organism-taxonomy -togoid-config config/mbgd_organism-taxonomy update -# Success: output/tsv/mbgd_organism-taxonomy.tsv is updated -> 2023-11-27T11:57:55 mbgd_organism-taxonomy +# File output/tsv/mbgd_organism-taxonomy.tsv is created 4.59002547119904 days ago (will be updated when >5 days) +# => Preserving output/tsv/mbgd_organism-taxonomy.tsv ### Update TSV for medgen-hp_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-hp_phenotype.tsv is newer than config/medgen-hp_phenotype/config.yaml # File output/tsv/medgen-hp_phenotype.tsv has no timestamp file -# File output/tsv/medgen-hp_phenotype.tsv is created 9.435475321174907 days ago (will be updated when >5 days) +# File output/tsv/medgen-hp_phenotype.tsv is created 14.02550061640456 days ago (will be updated when >5 days) ## Update config/medgen-hp_phenotype/config.yaml => output/tsv/medgen-hp_phenotype.tsv -< 2023-11-27T11:57:55 medgen-hp_phenotype +< 2023-12-02T02:07:33 medgen-hp_phenotype togoid-config config/medgen-hp_phenotype update -# Error: output/tsv/medgen-hp_phenotype.tsv new file size per old 248 / 283458 = 0.0008749091576177071 < 0.5 -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-hp_phenotype.tsv seems to contain HTML -# Failure: output/tsv/medgen-hp_phenotype.tsv is not updated -> 2023-11-27T11:57:56 medgen-hp_phenotype +# Success: output/tsv/medgen-hp_phenotype.tsv is updated +> 2023-12-02T02:07:40 medgen-hp_phenotype ### Update TSV for medgen-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-mesh.tsv is newer than config/medgen-mesh/config.yaml # File output/tsv/medgen-mesh.tsv has no timestamp file -# File output/tsv/medgen-mesh.tsv is created 9.435471865774131 days ago (will be updated when >5 days) +# File output/tsv/medgen-mesh.tsv is created 14.025574390219017 days ago (will be updated when >5 days) ## Update config/medgen-mesh/config.yaml => output/tsv/medgen-mesh.tsv -< 2023-11-27T11:57:56 medgen-mesh +< 2023-12-02T02:07:40 medgen-mesh togoid-config config/medgen-mesh update -# Error: output/tsv/medgen-mesh.tsv new file size per old 248 / 289268 = 0.0008573364492442994 < 0.5 -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mesh.tsv seems to contain HTML -# Failure: output/tsv/medgen-mesh.tsv is not updated -> 2023-11-27T11:57:56 medgen-mesh +# Success: output/tsv/medgen-mesh.tsv is updated +> 2023-12-02T02:07:42 medgen-mesh ### Update TSV for medgen-mondo if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-mondo.tsv is newer than config/medgen-mondo/config.yaml # File output/tsv/medgen-mondo.tsv has no timestamp file -# File output/tsv/medgen-mondo.tsv is created 9.435469624484039 days ago (will be updated when >5 days) +# File output/tsv/medgen-mondo.tsv is created 14.025581759381934 days ago (will be updated when >5 days) ## Update config/medgen-mondo/config.yaml => output/tsv/medgen-mondo.tsv -< 2023-11-27T11:57:56 medgen-mondo +< 2023-12-02T02:07:42 medgen-mondo togoid-config config/medgen-mondo update -# Error: output/tsv/medgen-mondo.tsv new file size per old 248 / 366639 = 0.0006764146749254716 < 0.5 -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-mondo.tsv seems to contain HTML -# Failure: output/tsv/medgen-mondo.tsv is not updated -> 2023-11-27T11:57:56 medgen-mondo +# Success: output/tsv/medgen-mondo.tsv is updated +> 2023-12-02T02:07:43 medgen-mondo ### Update TSV for medgen-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-ncbigene.tsv is newer than config/medgen-ncbigene/config.yaml # File output/tsv/medgen-ncbigene.tsv has no timestamp file -# File output/tsv/medgen-ncbigene.tsv is created 9.435468715762141 days ago (will be updated when >5 days) +# File output/tsv/medgen-ncbigene.tsv is created 14.025592511775752 days ago (will be updated when >5 days) ## Update config/medgen-ncbigene/config.yaml => output/tsv/medgen-ncbigene.tsv -< 2023-11-27T11:57:56 medgen-ncbigene +< 2023-12-02T02:07:43 medgen-ncbigene togoid-config config/medgen-ncbigene update -# Error: output/tsv/medgen-ncbigene.tsv new file size per old 248 / 104108 = 0.0023821416221616013 < 0.5 -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-ncbigene.tsv seems to contain HTML -# Failure: output/tsv/medgen-ncbigene.tsv is not updated -> 2023-11-27T11:57:57 medgen-ncbigene +# Success: output/tsv/medgen-ncbigene.tsv is updated +> 2023-12-02T02:07:44 medgen-ncbigene ### Update TSV for medgen-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-omim_phenotype.tsv is newer than config/medgen-omim_phenotype/config.yaml # File output/tsv/medgen-omim_phenotype.tsv has no timestamp file -# File output/tsv/medgen-omim_phenotype.tsv is created 9.435468691928543 days ago (will be updated when >5 days) +# File output/tsv/medgen-omim_phenotype.tsv is created 14.025593785828207 days ago (will be updated when >5 days) ## Update config/medgen-omim_phenotype/config.yaml => output/tsv/medgen-omim_phenotype.tsv -< 2023-11-27T11:57:57 medgen-omim_phenotype +< 2023-12-02T02:07:44 medgen-omim_phenotype togoid-config config/medgen-omim_phenotype update -# Error: output/tsv/medgen-omim_phenotype.tsv new file size per old 248 / 176688 = 0.0014036040930906456 < 0.5 -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-omim_phenotype.tsv seems to contain HTML -# Failure: output/tsv/medgen-omim_phenotype.tsv is not updated -> 2023-11-27T11:57:57 medgen-omim_phenotype +# Success: output/tsv/medgen-omim_phenotype.tsv is updated +> 2023-12-02T02:07:45 medgen-omim_phenotype ### Update TSV for medgen-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/medgen-orphanet_phenotype.tsv is newer than config/medgen-orphanet_phenotype/config.yaml # File output/tsv/medgen-orphanet_phenotype.tsv has no timestamp file -# File output/tsv/medgen-orphanet_phenotype.tsv is created 9.435468001675625 days ago (will be updated when >5 days) +# File output/tsv/medgen-orphanet_phenotype.tsv is created 14.025599968976609 days ago (will be updated when >5 days) ## Update config/medgen-orphanet_phenotype/config.yaml => output/tsv/medgen-orphanet_phenotype.tsv -< 2023-11-27T11:57:57 medgen-orphanet_phenotype +< 2023-12-02T02:07:45 medgen-orphanet_phenotype togoid-config config/medgen-orphanet_phenotype update -# Error: output/tsv/medgen-orphanet_phenotype.tsv new file size per old 248 / 137225 = 0.001807250865367098 < 0.5 -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/medgen-orphanet_phenotype.tsv seems to contain HTML -# Failure: output/tsv/medgen-orphanet_phenotype.tsv is not updated -> 2023-11-27T11:57:57 medgen-orphanet_phenotype +# Success: output/tsv/medgen-orphanet_phenotype.tsv is updated +> 2023-12-02T02:07:45 medgen-orphanet_phenotype ### Update TSV for mgi_gene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-ensembl_gene.tsv is newer than config/mgi_gene-ensembl_gene/config.yaml # File output/tsv/mgi_gene-ensembl_gene.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-ensembl_gene/config.yaml => output/tsv/mgi_gene-ensembl_gene.tsv -< 2023-11-27T11:57:57 mgi_gene-ensembl_gene +< 2023-12-02T02:07:45 mgi_gene-ensembl_gene togoid-config config/mgi_gene-ensembl_gene update # Success: output/tsv/mgi_gene-ensembl_gene.tsv is updated -> 2023-11-27T11:57:58 mgi_gene-ensembl_gene +> 2023-12-02T02:07:46 mgi_gene-ensembl_gene ### Update TSV for mgi_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-hgnc.tsv is newer than config/mgi_gene-hgnc/config.yaml # File output/tsv/mgi_gene-hgnc.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-hgnc/config.yaml => output/tsv/mgi_gene-hgnc.tsv -< 2023-11-27T11:57:58 mgi_gene-hgnc +< 2023-12-02T02:07:46 mgi_gene-hgnc togoid-config config/mgi_gene-hgnc update # Success: output/tsv/mgi_gene-hgnc.tsv is updated -> 2023-11-27T11:57:59 mgi_gene-hgnc +> 2023-12-02T02:07:46 mgi_gene-hgnc ### Update TSV for mgi_gene-mgi_allele if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-mgi_allele.tsv is newer than config/mgi_gene-mgi_allele/config.yaml # File output/tsv/mgi_gene-mgi_allele.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-mgi_allele/config.yaml => output/tsv/mgi_gene-mgi_allele.tsv -< 2023-11-27T11:57:59 mgi_gene-mgi_allele +< 2023-12-02T02:07:46 mgi_gene-mgi_allele togoid-config config/mgi_gene-mgi_allele update # Success: output/tsv/mgi_gene-mgi_allele.tsv is updated -> 2023-11-27T11:58:00 mgi_gene-mgi_allele +> 2023-12-02T02:07:48 mgi_gene-mgi_allele ### Update TSV for mgi_gene-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-ncbigene.tsv is newer than config/mgi_gene-ncbigene/config.yaml # File output/tsv/mgi_gene-ncbigene.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-ncbigene/config.yaml => output/tsv/mgi_gene-ncbigene.tsv -< 2023-11-27T11:58:00 mgi_gene-ncbigene +< 2023-12-02T02:07:48 mgi_gene-ncbigene togoid-config config/mgi_gene-ncbigene update # Success: output/tsv/mgi_gene-ncbigene.tsv is updated -> 2023-11-27T11:58:00 mgi_gene-ncbigene +> 2023-12-02T02:07:48 mgi_gene-ncbigene ### Update TSV for mgi_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_gene-uniprot.tsv is newer than config/mgi_gene-uniprot/config.yaml # File output/tsv/mgi_gene-uniprot.tsv is older than input/mgi_gene/download.lock ## Update config/mgi_gene-uniprot/config.yaml => output/tsv/mgi_gene-uniprot.tsv -< 2023-11-27T11:58:00 mgi_gene-uniprot +< 2023-12-02T02:07:48 mgi_gene-uniprot togoid-config config/mgi_gene-uniprot update # Success: output/tsv/mgi_gene-uniprot.tsv is updated -> 2023-11-27T11:58:01 mgi_gene-uniprot +> 2023-12-02T02:07:49 mgi_gene-uniprot ### Update TSV for mgi_genotype-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_genotype-doid.tsv is newer than config/mgi_genotype-doid/config.yaml # File output/tsv/mgi_genotype-doid.tsv is older than input/mgi_genotype/download.lock ## Update config/mgi_genotype-doid/config.yaml => output/tsv/mgi_genotype-doid.tsv -< 2023-11-27T11:58:01 mgi_genotype-doid +< 2023-12-02T02:07:49 mgi_genotype-doid togoid-config config/mgi_genotype-doid update # Success: output/tsv/mgi_genotype-doid.tsv is updated -> 2023-11-27T11:58:02 mgi_genotype-doid +> 2023-12-02T02:07:50 mgi_genotype-doid ### Update TSV for mgi_genotype-mgi_allele if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_genotype-mgi_allele.tsv is newer than config/mgi_genotype-mgi_allele/config.yaml # File output/tsv/mgi_genotype-mgi_allele.tsv is older than input/mgi_genotype/download.lock ## Update config/mgi_genotype-mgi_allele/config.yaml => output/tsv/mgi_genotype-mgi_allele.tsv -< 2023-11-27T11:58:02 mgi_genotype-mgi_allele +< 2023-12-02T02:07:50 mgi_genotype-mgi_allele togoid-config config/mgi_genotype-mgi_allele update # Success: output/tsv/mgi_genotype-mgi_allele.tsv is updated -> 2023-11-27T11:58:04 mgi_genotype-mgi_allele +> 2023-12-02T02:07:52 mgi_genotype-mgi_allele ### Update TSV for mgi_genotype-mp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mgi_genotype-mp.tsv is newer than config/mgi_genotype-mp/config.yaml # File output/tsv/mgi_genotype-mp.tsv is older than input/mgi_genotype/download.lock ## Update config/mgi_genotype-mp/config.yaml => output/tsv/mgi_genotype-mp.tsv -< 2023-11-27T11:58:04 mgi_genotype-mp +< 2023-12-02T02:07:52 mgi_genotype-mp togoid-config config/mgi_genotype-mp update # Success: output/tsv/mgi_genotype-mp.tsv is updated -> 2023-11-27T11:58:06 mgi_genotype-mp +> 2023-12-02T02:07:54 mgi_genotype-mp ### Update TSV for mondo-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-doid.tsv is newer than config/mondo-doid/config.yaml # File output/tsv/mondo-doid.tsv has no timestamp file -# File output/tsv/mondo-doid.tsv is created 9.435458591160902 days ago (will be updated when >5 days) +# File output/tsv/mondo-doid.tsv is created 14.025601649612511 days ago (will be updated when >5 days) ## Update config/mondo-doid/config.yaml => output/tsv/mondo-doid.tsv -< 2023-11-27T11:58:06 mondo-doid +< 2023-12-02T02:07:54 mondo-doid togoid-config config/mondo-doid update -# Error: output/tsv/mondo-doid.tsv new file size per old 248 / 155460 = 0.0015952656631931044 < 0.5 -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-doid.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-doid.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Error: output/tsv/mondo-doid.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-doid.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-doid.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-doid.tsv seems to contain HTML -# Failure: output/tsv/mondo-doid.tsv is not updated -> 2023-11-27T11:58:06 mondo-doid +# Success: output/tsv/mondo-doid.tsv is updated +> 2023-12-02T02:07:56 mondo-doid ### Update TSV for mondo-hp_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-hp_phenotype.tsv is newer than config/mondo-hp_phenotype/config.yaml # File output/tsv/mondo-hp_phenotype.tsv has no timestamp file -# File output/tsv/mondo-hp_phenotype.tsv is created 9.435458528271631 days ago (will be updated when >5 days) +# File output/tsv/mondo-hp_phenotype.tsv is created 14.025617940805114 days ago (will be updated when >5 days) ## Update config/mondo-hp_phenotype/config.yaml => output/tsv/mondo-hp_phenotype.tsv -< 2023-11-27T11:58:06 mondo-hp_phenotype +< 2023-12-02T02:07:56 mondo-hp_phenotype togoid-config config/mondo-hp_phenotype update -# Error: output/tsv/mondo-hp_phenotype.tsv new file size per old 248 / 9184 = 0.02700348432055749 < 0.5 -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-hp_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-hp_phenotype.tsv seems to contain HTML -# Failure: output/tsv/mondo-hp_phenotype.tsv is not updated -> 2023-11-27T11:58:07 mondo-hp_phenotype +# Success: output/tsv/mondo-hp_phenotype.tsv is updated +> 2023-12-02T02:07:57 mondo-hp_phenotype ### Update TSV for mondo-meddra if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-meddra.tsv is newer than config/mondo-meddra/config.yaml # File output/tsv/mondo-meddra.tsv has no timestamp file -# File output/tsv/mondo-meddra.tsv is created 9.43545783299478 days ago (will be updated when >5 days) +# File output/tsv/mondo-meddra.tsv is created 14.025619658686887 days ago (will be updated when >5 days) ## Update config/mondo-meddra/config.yaml => output/tsv/mondo-meddra.tsv -< 2023-11-27T11:58:07 mondo-meddra +< 2023-12-02T02:07:57 mondo-meddra togoid-config config/mondo-meddra update -# Error: output/tsv/mondo-meddra.tsv new file size per old 248 / 25262 = 0.009817116617844984 < 0.5 -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-meddra.tsv seems to contain HTML -# Failure: output/tsv/mondo-meddra.tsv is not updated -> 2023-11-27T11:58:07 mondo-meddra +# Success: output/tsv/mondo-meddra.tsv is updated +> 2023-12-02T02:07:57 mondo-meddra ### Update TSV for mondo-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-mesh.tsv is newer than config/mondo-mesh/config.yaml # File output/tsv/mondo-mesh.tsv has no timestamp file -# File output/tsv/mondo-mesh.tsv is created 9.435456965540636 days ago (will be updated when >5 days) +# File output/tsv/mondo-mesh.tsv is created 14.025621954274087 days ago (will be updated when >5 days) ## Update config/mondo-mesh/config.yaml => output/tsv/mondo-mesh.tsv -< 2023-11-27T11:58:07 mondo-mesh +< 2023-12-02T02:07:57 mondo-mesh togoid-config config/mondo-mesh update -# Error: output/tsv/mondo-mesh.tsv new file size per old 248 / 133836 = 0.0018530141367046236 < 0.5 -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-mesh.tsv seems to contain HTML -# Failure: output/tsv/mondo-mesh.tsv is not updated -> 2023-11-27T11:58:07 mondo-mesh +# Success: output/tsv/mondo-mesh.tsv is updated +> 2023-12-02T02:07:58 mondo-mesh ### Update TSV for mondo-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-omim_phenotype.tsv is newer than config/mondo-omim_phenotype/config.yaml # File output/tsv/mondo-omim_phenotype.tsv has no timestamp file -# File output/tsv/mondo-omim_phenotype.tsv is created 9.435456047910858 days ago (will be updated when >5 days) +# File output/tsv/mondo-omim_phenotype.tsv is created 14.025624760590775 days ago (will be updated when >5 days) ## Update config/mondo-omim_phenotype/config.yaml => output/tsv/mondo-omim_phenotype.tsv -< 2023-11-27T11:58:07 mondo-omim_phenotype +< 2023-12-02T02:07:58 mondo-omim_phenotype togoid-config config/mondo-omim_phenotype update -# Error: output/tsv/mondo-omim_phenotype.tsv new file size per old 248 / 145395 = 0.0017056982702293752 < 0.5 -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-omim_phenotype.tsv seems to contain HTML -# Failure: output/tsv/mondo-omim_phenotype.tsv is not updated -> 2023-11-27T11:58:08 mondo-omim_phenotype +# Success: output/tsv/mondo-omim_phenotype.tsv is updated +> 2023-12-02T02:07:59 mondo-omim_phenotype ### Update TSV for mondo-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/mondo-orphanet_phenotype.tsv is newer than config/mondo-orphanet_phenotype/config.yaml # File output/tsv/mondo-orphanet_phenotype.tsv has no timestamp file -# File output/tsv/mondo-orphanet_phenotype.tsv is created 9.435455452089652 days ago (will be updated when >5 days) +# File output/tsv/mondo-orphanet_phenotype.tsv is created 14.02562700660624 days ago (will be updated when >5 days) ## Update config/mondo-orphanet_phenotype/config.yaml => output/tsv/mondo-orphanet_phenotype.tsv -< 2023-11-27T11:58:08 mondo-orphanet_phenotype +< 2023-12-02T02:07:59 mondo-orphanet_phenotype togoid-config config/mondo-orphanet_phenotype update -# Error: output/tsv/mondo-orphanet_phenotype.tsv new file size per old 248 / 146923 = 0.001687958998931413 < 0.5 -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/mondo-orphanet_phenotype.tsv seems to contain HTML -# Failure: output/tsv/mondo-orphanet_phenotype.tsv is not updated -> 2023-11-27T11:58:08 mondo-orphanet_phenotype +# Success: output/tsv/mondo-orphanet_phenotype.tsv is updated +> 2023-12-02T02:07:59 mondo-orphanet_phenotype ### Update TSV for nando-mondo if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/nando-mondo.tsv is newer than config/nando-mondo/config.yaml # File output/tsv/nando-mondo.tsv has no timestamp file -# File output/tsv/nando-mondo.tsv is created 9.435455082190485 days ago (will be updated when >5 days) +# File output/tsv/nando-mondo.tsv is created 14.025629586789098 days ago (will be updated when >5 days) ## Update config/nando-mondo/config.yaml => output/tsv/nando-mondo.tsv -< 2023-11-27T11:58:08 nando-mondo +< 2023-12-02T02:07:59 nando-mondo togoid-config config/nando-mondo update -# Error: output/tsv/nando-mondo.tsv new file size per old 248 / 38240 = 0.006485355648535565 < 0.5 -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/nando-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/nando-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Error: output/tsv/nando-mondo.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/nando-mondo.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/nando-mondo.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/nando-mondo.tsv seems to contain HTML -# Failure: output/tsv/nando-mondo.tsv is not updated -> 2023-11-27T11:58:08 nando-mondo +# Success: output/tsv/nando-mondo.tsv is updated +> 2023-12-02T02:08:00 nando-mondo ### Update TSV for ncbigene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-ensembl_gene.tsv is newer than config/ncbigene-ensembl_gene/config.yaml # File output/tsv/ncbigene-ensembl_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-ensembl_gene/config.yaml => output/tsv/ncbigene-ensembl_gene.tsv -< 2023-11-27T11:58:08 ncbigene-ensembl_gene +< 2023-12-02T02:08:00 ncbigene-ensembl_gene togoid-config config/ncbigene-ensembl_gene update # Success: output/tsv/ncbigene-ensembl_gene.tsv is updated -> 2023-11-27T11:58:37 ncbigene-ensembl_gene +> 2023-12-02T02:08:31 ncbigene-ensembl_gene ### Update TSV for ncbigene-ensembl_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-ensembl_protein.tsv is newer than config/ncbigene-ensembl_protein/config.yaml # File output/tsv/ncbigene-ensembl_protein.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-ensembl_protein/config.yaml => output/tsv/ncbigene-ensembl_protein.tsv -< 2023-11-27T11:58:37 ncbigene-ensembl_protein +< 2023-12-02T02:08:31 ncbigene-ensembl_protein togoid-config config/ncbigene-ensembl_protein update # Success: output/tsv/ncbigene-ensembl_protein.tsv is updated -> 2023-11-27T11:59:36 ncbigene-ensembl_protein +> 2023-12-02T02:09:28 ncbigene-ensembl_protein ### Update TSV for ncbigene-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-ensembl_transcript.tsv is newer than config/ncbigene-ensembl_transcript/config.yaml # File output/tsv/ncbigene-ensembl_transcript.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-ensembl_transcript/config.yaml => output/tsv/ncbigene-ensembl_transcript.tsv -< 2023-11-27T11:59:36 ncbigene-ensembl_transcript +< 2023-12-02T02:09:28 ncbigene-ensembl_transcript togoid-config config/ncbigene-ensembl_transcript update # Success: output/tsv/ncbigene-ensembl_transcript.tsv is updated -> 2023-11-27T12:00:29 ncbigene-ensembl_transcript +> 2023-12-02T02:10:25 ncbigene-ensembl_transcript ### Update TSV for ncbigene-flybase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-flybase_gene.tsv is newer than config/ncbigene-flybase_gene/config.yaml # File output/tsv/ncbigene-flybase_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-flybase_gene/config.yaml => output/tsv/ncbigene-flybase_gene.tsv -< 2023-11-27T12:00:29 ncbigene-flybase_gene +< 2023-12-02T02:10:25 ncbigene-flybase_gene togoid-config config/ncbigene-flybase_gene update # Success: output/tsv/ncbigene-flybase_gene.tsv is updated -> 2023-11-27T12:01:39 ncbigene-flybase_gene +> 2023-12-02T02:11:33 ncbigene-flybase_gene ### Update TSV for ncbigene-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-go.tsv is newer than config/ncbigene-go/config.yaml # File output/tsv/ncbigene-go.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-go/config.yaml => output/tsv/ncbigene-go.tsv -< 2023-11-27T12:01:39 ncbigene-go +< 2023-12-02T02:11:33 ncbigene-go togoid-config config/ncbigene-go update # Success: output/tsv/ncbigene-go.tsv is updated -> 2023-11-27T12:03:57 ncbigene-go +> 2023-12-02T02:13:54 ncbigene-go ### Update TSV for ncbigene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-hgnc.tsv is newer than config/ncbigene-hgnc/config.yaml # File output/tsv/ncbigene-hgnc.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-hgnc/config.yaml => output/tsv/ncbigene-hgnc.tsv -< 2023-11-27T12:03:57 ncbigene-hgnc +< 2023-12-02T02:13:54 ncbigene-hgnc togoid-config config/ncbigene-hgnc update # Success: output/tsv/ncbigene-hgnc.tsv is updated -> 2023-11-27T12:03:58 ncbigene-hgnc +> 2023-12-02T02:13:55 ncbigene-hgnc ### Update TSV for ncbigene-mgi_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-mgi_gene.tsv is newer than config/ncbigene-mgi_gene/config.yaml # File output/tsv/ncbigene-mgi_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-mgi_gene/config.yaml => output/tsv/ncbigene-mgi_gene.tsv -< 2023-11-27T12:03:58 ncbigene-mgi_gene +< 2023-12-02T02:13:55 ncbigene-mgi_gene togoid-config config/ncbigene-mgi_gene update # Success: output/tsv/ncbigene-mgi_gene.tsv is updated -> 2023-11-27T12:04:54 ncbigene-mgi_gene +> 2023-12-02T02:14:52 ncbigene-mgi_gene ### Update TSV for ncbigene-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-mirbase.tsv is newer than config/ncbigene-mirbase/config.yaml # File output/tsv/ncbigene-mirbase.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-mirbase/config.yaml => output/tsv/ncbigene-mirbase.tsv -< 2023-11-27T12:04:54 ncbigene-mirbase +< 2023-12-02T02:14:52 ncbigene-mirbase togoid-config config/ncbigene-mirbase update # Success: output/tsv/ncbigene-mirbase.tsv is updated -> 2023-11-27T12:06:26 ncbigene-mirbase +> 2023-12-02T02:16:23 ncbigene-mirbase ### Update TSV for ncbigene-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-omim_gene.tsv is newer than config/ncbigene-omim_gene/config.yaml # File output/tsv/ncbigene-omim_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-omim_gene/config.yaml => output/tsv/ncbigene-omim_gene.tsv -< 2023-11-27T12:06:26 ncbigene-omim_gene +< 2023-12-02T02:16:23 ncbigene-omim_gene togoid-config config/ncbigene-omim_gene update # Success: output/tsv/ncbigene-omim_gene.tsv is updated -> 2023-11-27T12:06:27 ncbigene-omim_gene +> 2023-12-02T02:16:24 ncbigene-omim_gene ### Update TSV for ncbigene-refseq_genomic if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-refseq_genomic.tsv is newer than config/ncbigene-refseq_genomic/config.yaml # File output/tsv/ncbigene-refseq_genomic.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-refseq_genomic/config.yaml => output/tsv/ncbigene-refseq_genomic.tsv -< 2023-11-27T12:06:27 ncbigene-refseq_genomic +< 2023-12-02T02:16:24 ncbigene-refseq_genomic togoid-config config/ncbigene-refseq_genomic update # Success: output/tsv/ncbigene-refseq_genomic.tsv is updated -> 2023-11-27T12:22:04 ncbigene-refseq_genomic +> 2023-12-02T02:20:14 ncbigene-refseq_genomic ### Update TSV for ncbigene-refseq_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-refseq_protein.tsv is newer than config/ncbigene-refseq_protein/config.yaml # File output/tsv/ncbigene-refseq_protein.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-refseq_protein/config.yaml => output/tsv/ncbigene-refseq_protein.tsv -< 2023-11-27T12:22:04 ncbigene-refseq_protein +< 2023-12-02T02:20:14 ncbigene-refseq_protein togoid-config config/ncbigene-refseq_protein update # Success: output/tsv/ncbigene-refseq_protein.tsv is updated -> 2023-11-27T12:26:19 ncbigene-refseq_protein +> 2023-12-02T02:25:08 ncbigene-refseq_protein ### Update TSV for ncbigene-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-refseq_rna.tsv is newer than config/ncbigene-refseq_rna/config.yaml # File output/tsv/ncbigene-refseq_rna.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-refseq_rna/config.yaml => output/tsv/ncbigene-refseq_rna.tsv -< 2023-11-27T12:26:19 ncbigene-refseq_rna +< 2023-12-02T02:25:08 ncbigene-refseq_rna togoid-config config/ncbigene-refseq_rna update # Success: output/tsv/ncbigene-refseq_rna.tsv is updated -> 2023-11-27T12:29:54 ncbigene-refseq_rna +> 2023-12-02T02:29:14 ncbigene-refseq_rna ### Update TSV for ncbigene-rgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-rgd.tsv is newer than config/ncbigene-rgd/config.yaml # File output/tsv/ncbigene-rgd.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-rgd/config.yaml => output/tsv/ncbigene-rgd.tsv -< 2023-11-27T12:29:54 ncbigene-rgd +< 2023-12-02T02:29:14 ncbigene-rgd togoid-config config/ncbigene-rgd update # Success: output/tsv/ncbigene-rgd.tsv is updated -> 2023-11-27T12:30:49 ncbigene-rgd +> 2023-12-02T02:30:10 ncbigene-rgd ### Update TSV for ncbigene-sgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-sgd.tsv is newer than config/ncbigene-sgd/config.yaml # File output/tsv/ncbigene-sgd.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-sgd/config.yaml => output/tsv/ncbigene-sgd.tsv -< 2023-11-27T12:30:49 ncbigene-sgd +< 2023-12-02T02:30:10 ncbigene-sgd togoid-config config/ncbigene-sgd update # Success: output/tsv/ncbigene-sgd.tsv is updated -> 2023-11-27T12:31:56 ncbigene-sgd +> 2023-12-02T02:31:15 ncbigene-sgd ### Update TSV for ncbigene-tair if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-tair.tsv is newer than config/ncbigene-tair/config.yaml # File output/tsv/ncbigene-tair.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-tair/config.yaml => output/tsv/ncbigene-tair.tsv -< 2023-11-27T12:31:56 ncbigene-tair +< 2023-12-02T02:31:15 ncbigene-tair togoid-config config/ncbigene-tair update # Success: output/tsv/ncbigene-tair.tsv is updated -> 2023-11-27T12:33:01 ncbigene-tair +> 2023-12-02T02:32:20 ncbigene-tair ### Update TSV for ncbigene-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-taxonomy.tsv is newer than config/ncbigene-taxonomy/config.yaml # File output/tsv/ncbigene-taxonomy.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-taxonomy/config.yaml => output/tsv/ncbigene-taxonomy.tsv -< 2023-11-27T12:33:01 ncbigene-taxonomy +< 2023-12-02T02:32:20 ncbigene-taxonomy togoid-config config/ncbigene-taxonomy update # Success: output/tsv/ncbigene-taxonomy.tsv is updated -> 2023-11-27T12:33:41 ncbigene-taxonomy +> 2023-12-02T02:33:00 ncbigene-taxonomy ### Update TSV for ncbigene-vgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-vgnc.tsv is newer than config/ncbigene-vgnc/config.yaml # File output/tsv/ncbigene-vgnc.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-vgnc/config.yaml => output/tsv/ncbigene-vgnc.tsv -< 2023-11-27T12:33:41 ncbigene-vgnc +< 2023-12-02T02:33:00 ncbigene-vgnc togoid-config config/ncbigene-vgnc update # Success: output/tsv/ncbigene-vgnc.tsv is updated -> 2023-11-27T12:34:47 ncbigene-vgnc +> 2023-12-02T02:34:05 ncbigene-vgnc ### Update TSV for ncbigene-wormbase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-wormbase_gene.tsv is newer than config/ncbigene-wormbase_gene/config.yaml # File output/tsv/ncbigene-wormbase_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-wormbase_gene/config.yaml => output/tsv/ncbigene-wormbase_gene.tsv -< 2023-11-27T12:34:47 ncbigene-wormbase_gene +< 2023-12-02T02:34:05 ncbigene-wormbase_gene togoid-config config/ncbigene-wormbase_gene update # Success: output/tsv/ncbigene-wormbase_gene.tsv is updated -> 2023-11-27T12:35:51 ncbigene-wormbase_gene +> 2023-12-02T02:35:10 ncbigene-wormbase_gene ### Update TSV for ncbigene-xenbase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-xenbase_gene.tsv is newer than config/ncbigene-xenbase_gene/config.yaml # File output/tsv/ncbigene-xenbase_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-xenbase_gene/config.yaml => output/tsv/ncbigene-xenbase_gene.tsv -< 2023-11-27T12:35:51 ncbigene-xenbase_gene +< 2023-12-02T02:35:10 ncbigene-xenbase_gene togoid-config config/ncbigene-xenbase_gene update # Success: output/tsv/ncbigene-xenbase_gene.tsv is updated -> 2023-11-27T12:36:56 ncbigene-xenbase_gene +> 2023-12-02T02:36:14 ncbigene-xenbase_gene ### Update TSV for ncbigene-zfin_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/ncbigene-zfin_gene.tsv is newer than config/ncbigene-zfin_gene/config.yaml # File output/tsv/ncbigene-zfin_gene.tsv is older than input/ncbigene/download.lock ## Update config/ncbigene-zfin_gene/config.yaml => output/tsv/ncbigene-zfin_gene.tsv -< 2023-11-27T12:36:56 ncbigene-zfin_gene +< 2023-12-02T02:36:14 ncbigene-zfin_gene togoid-config config/ncbigene-zfin_gene update # Success: output/tsv/ncbigene-zfin_gene.tsv is updated -> 2023-11-27T12:38:02 ncbigene-zfin_gene -### Update TSV for ncit_disease-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +> 2023-12-02T02:37:19 ncbigene-zfin_gene +### Update TSV for ncit_disease-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/ncit_disease-ncit_tissue.tsv is newer than config/ncit_disease-ncit_tissue/config.yaml # File output/tsv/ncit_disease-ncit_tissue.tsv has no timestamp file -# File output/tsv/ncit_disease-ncit_tissue.tsv is created 9.442646552035972 days ago (will be updated when >5 days) -## Update config/ncit_disease-ncit_tissue/config.yaml => output/tsv/ncit_disease-ncit_tissue.tsv -< 2023-11-27T12:38:02 ncit_disease-ncit_tissue -togoid-config config/ncit_disease-ncit_tissue update -# Success: output/tsv/ncit_disease-ncit_tissue.tsv is updated -> 2023-11-27T12:38:05 ncit_disease-ncit_tissue +# File output/tsv/ncit_disease-ncit_tissue.tsv is created 4.58280603264449 days ago (will be updated when >5 days) +# => Preserving output/tsv/ncit_disease-ncit_tissue.tsv ### Update TSV for oma_protein-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/oma_protein-ensembl_gene.tsv is newer than config/oma_protein-ensembl_gene/config.yaml # File output/tsv/oma_protein-ensembl_gene.tsv is newer than input/oma_protein/download.lock @@ -1851,345 +1300,120 @@ togoid-config config/ncit_disease-ncit_tissue update ### Update TSV for orphanet_gene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-ensembl_gene.tsv is newer than config/orphanet_gene-ensembl_gene/config.yaml # File output/tsv/orphanet_gene-ensembl_gene.tsv has no timestamp file -# File output/tsv/orphanet_gene-ensembl_gene.tsv is created 9.442673637099675 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-ensembl_gene.tsv is created 14.025479440509837 days ago (will be updated when >5 days) ## Update config/orphanet_gene-ensembl_gene/config.yaml => output/tsv/orphanet_gene-ensembl_gene.tsv -< 2023-11-27T12:38:05 orphanet_gene-ensembl_gene +< 2023-12-02T02:37:19 orphanet_gene-ensembl_gene togoid-config config/orphanet_gene-ensembl_gene update -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv new file size per old 248 / 99337 = 0.0024965521406927933 < 0.5 -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-ensembl_gene.tsv seems to contain HTML -# Failure: output/tsv/orphanet_gene-ensembl_gene.tsv is not updated -> 2023-11-27T12:38:05 orphanet_gene-ensembl_gene +# Success: output/tsv/orphanet_gene-ensembl_gene.tsv is updated +> 2023-12-02T02:37:20 orphanet_gene-ensembl_gene ### Update TSV for orphanet_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-hgnc.tsv is newer than config/orphanet_gene-hgnc/config.yaml # File output/tsv/orphanet_gene-hgnc.tsv has no timestamp file -# File output/tsv/orphanet_gene-hgnc.tsv is created 9.442673318794236 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-hgnc.tsv is created 14.025488326387812 days ago (will be updated when >5 days) ## Update config/orphanet_gene-hgnc/config.yaml => output/tsv/orphanet_gene-hgnc.tsv -< 2023-11-27T12:38:05 orphanet_gene-hgnc +< 2023-12-02T02:37:20 orphanet_gene-hgnc togoid-config config/orphanet_gene-hgnc update -# Error: output/tsv/orphanet_gene-hgnc.tsv new file size per old 248 / 54005 = 0.004592167391908156 < 0.5 -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-hgnc.tsv seems to contain HTML -# Failure: output/tsv/orphanet_gene-hgnc.tsv is not updated -> 2023-11-27T12:38:05 orphanet_gene-hgnc +# Success: output/tsv/orphanet_gene-hgnc.tsv is updated +> 2023-12-02T02:37:21 orphanet_gene-hgnc ### Update TSV for orphanet_gene-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-omim_gene.tsv is newer than config/orphanet_gene-omim_gene/config.yaml # File output/tsv/orphanet_gene-omim_gene.tsv has no timestamp file -# File output/tsv/orphanet_gene-omim_gene.tsv is created 9.442672186354375 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-omim_gene.tsv is created 14.02548878573338 days ago (will be updated when >5 days) ## Update config/orphanet_gene-omim_gene/config.yaml => output/tsv/orphanet_gene-omim_gene.tsv -< 2023-11-27T12:38:05 orphanet_gene-omim_gene +< 2023-12-02T02:37:21 orphanet_gene-omim_gene togoid-config config/orphanet_gene-omim_gene update -# Error: output/tsv/orphanet_gene-omim_gene.tsv new file size per old 248 / 60424 = 0.004104329405534225 < 0.5 -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-omim_gene.tsv seems to contain HTML -# Failure: output/tsv/orphanet_gene-omim_gene.tsv is not updated -> 2023-11-27T12:38:06 orphanet_gene-omim_gene +# Success: output/tsv/orphanet_gene-omim_gene.tsv is updated +> 2023-12-02T02:37:21 orphanet_gene-omim_gene ### Update TSV for orphanet_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_gene-uniprot.tsv is newer than config/orphanet_gene-uniprot/config.yaml # File output/tsv/orphanet_gene-uniprot.tsv has no timestamp file -# File output/tsv/orphanet_gene-uniprot.tsv is created 9.44267072673089 days ago (will be updated when >5 days) +# File output/tsv/orphanet_gene-uniprot.tsv is created 14.02548867875743 days ago (will be updated when >5 days) ## Update config/orphanet_gene-uniprot/config.yaml => output/tsv/orphanet_gene-uniprot.tsv -< 2023-11-27T12:38:06 orphanet_gene-uniprot +< 2023-12-02T02:37:21 orphanet_gene-uniprot togoid-config config/orphanet_gene-uniprot update -# Error: output/tsv/orphanet_gene-uniprot.tsv new file size per old 248 / 60188 = 0.004120422675616402 < 0.5 -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_gene-uniprot.tsv seems to contain HTML -# Failure: output/tsv/orphanet_gene-uniprot.tsv is not updated -> 2023-11-27T12:38:06 orphanet_gene-uniprot +# Success: output/tsv/orphanet_gene-uniprot.tsv is updated +> 2023-12-02T02:37:22 orphanet_gene-uniprot ### Update TSV for orphanet_phenotype-meddra if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-meddra.tsv is newer than config/orphanet_phenotype-meddra/config.yaml # File output/tsv/orphanet_phenotype-meddra.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-meddra.tsv is created 9.44266983833 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-meddra.tsv is created 14.025490077148115 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-meddra/config.yaml => output/tsv/orphanet_phenotype-meddra.tsv -< 2023-11-27T12:38:06 orphanet_phenotype-meddra +< 2023-12-02T02:37:22 orphanet_phenotype-meddra togoid-config config/orphanet_phenotype-meddra update -# Error: output/tsv/orphanet_phenotype-meddra.tsv new file size per old 248 / 17104 = 0.014499532273152479 < 0.5 -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-meddra.tsv seems to contain HTML -# Failure: output/tsv/orphanet_phenotype-meddra.tsv is not updated -> 2023-11-27T12:38:07 orphanet_phenotype-meddra +# Success: output/tsv/orphanet_phenotype-meddra.tsv is updated +> 2023-12-02T02:37:23 orphanet_phenotype-meddra ### Update TSV for orphanet_phenotype-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-mesh.tsv is newer than config/orphanet_phenotype-mesh/config.yaml # File output/tsv/orphanet_phenotype-mesh.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-mesh.tsv is created 9.442669084812962 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-mesh.tsv is created 14.025492500456043 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-mesh/config.yaml => output/tsv/orphanet_phenotype-mesh.tsv -< 2023-11-27T12:38:07 orphanet_phenotype-mesh +< 2023-12-02T02:37:23 orphanet_phenotype-mesh togoid-config config/orphanet_phenotype-mesh update -# Error: output/tsv/orphanet_phenotype-mesh.tsv new file size per old 248 / 23642 = 0.010489806276964725 < 0.5 -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-mesh.tsv seems to contain HTML -# Failure: output/tsv/orphanet_phenotype-mesh.tsv is not updated -> 2023-11-27T12:38:07 orphanet_phenotype-mesh +# Success: output/tsv/orphanet_phenotype-mesh.tsv is updated +> 2023-12-02T02:37:23 orphanet_phenotype-mesh ### Update TSV for orphanet_phenotype-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-omim_phenotype.tsv is newer than config/orphanet_phenotype-omim_phenotype/config.yaml # File output/tsv/orphanet_phenotype-omim_phenotype.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-omim_phenotype.tsv is created 9.44267011825955 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-omim_phenotype.tsv is created 14.02549273647382 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-omim_phenotype/config.yaml => output/tsv/orphanet_phenotype-omim_phenotype.tsv -< 2023-11-27T12:38:07 orphanet_phenotype-omim_phenotype +< 2023-12-02T02:37:23 orphanet_phenotype-omim_phenotype togoid-config config/orphanet_phenotype-omim_phenotype update -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv new file size per old 248 / 98942 = 0.002506518970710113 < 0.5 -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-omim_phenotype.tsv seems to contain HTML -# Failure: output/tsv/orphanet_phenotype-omim_phenotype.tsv is not updated -> 2023-11-27T12:38:08 orphanet_phenotype-omim_phenotype +# Success: output/tsv/orphanet_phenotype-omim_phenotype.tsv is updated +> 2023-12-02T02:37:24 orphanet_phenotype-omim_phenotype ### Update TSV for orphanet_phenotype-orphanet_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/orphanet_phenotype-orphanet_gene.tsv is newer than config/orphanet_phenotype-orphanet_gene/config.yaml # File output/tsv/orphanet_phenotype-orphanet_gene.tsv has no timestamp file -# File output/tsv/orphanet_phenotype-orphanet_gene.tsv is created 9.442669235375833 days ago (will be updated when >5 days) +# File output/tsv/orphanet_phenotype-orphanet_gene.tsv is created 14.025496713708737 days ago (will be updated when >5 days) ## Update config/orphanet_phenotype-orphanet_gene/config.yaml => output/tsv/orphanet_phenotype-orphanet_gene.tsv -< 2023-11-27T12:38:08 orphanet_phenotype-orphanet_gene +< 2023-12-02T02:37:24 orphanet_phenotype-orphanet_gene togoid-config config/orphanet_phenotype-orphanet_gene update -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv new file size per old 248 / 103255 = 0.0024018207350733622 < 0.5 -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/orphanet_phenotype-orphanet_gene.tsv seems to contain HTML -# Failure: output/tsv/orphanet_phenotype-orphanet_gene.tsv is not updated -> 2023-11-27T12:38:08 orphanet_phenotype-orphanet_gene +# Success: output/tsv/orphanet_phenotype-orphanet_gene.tsv is updated +> 2023-12-02T02:37:25 orphanet_phenotype-orphanet_gene ### Update TSV for pdb-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-go.tsv is newer than config/pdb-go/config.yaml # File output/tsv/pdb-go.tsv has no timestamp file -# File output/tsv/pdb-go.tsv is created 9.442616344562559 days ago (will be updated when >5 days) +# File output/tsv/pdb-go.tsv is created 14.025456895653484 days ago (will be updated when >5 days) ## Update config/pdb-go/config.yaml => output/tsv/pdb-go.tsv -< 2023-11-27T12:38:08 pdb-go +< 2023-12-02T02:37:25 pdb-go togoid-config config/pdb-go update -# Error: output/tsv/pdb-go.tsv new file size per old 2232 / 21907743 = 0.0001018817867271859 < 0.5 -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Error: output/tsv/pdb-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-go.tsv seems to contain HTML -# Failure: output/tsv/pdb-go.tsv is not updated -> 2023-11-27T12:38:10 pdb-go +# Success: output/tsv/pdb-go.tsv is updated +> 2023-12-02T02:40:20 pdb-go ### Update TSV for pdb-interpro if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-interpro.tsv is newer than config/pdb-interpro/config.yaml # File output/tsv/pdb-interpro.tsv has no timestamp file -# File output/tsv/pdb-interpro.tsv is created 9.442619825969503 days ago (will be updated when >5 days) +# File output/tsv/pdb-interpro.tsv is created 14.027455528581157 days ago (will be updated when >5 days) ## Update config/pdb-interpro/config.yaml => output/tsv/pdb-interpro.tsv -< 2023-11-27T12:38:10 pdb-interpro +< 2023-12-02T02:40:20 pdb-interpro togoid-config config/pdb-interpro update -# Error: output/tsv/pdb-interpro.tsv new file size per old 248 / 10899870 = 2.2752564938847895e-05 < 0.5 -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-interpro.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-interpro.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-interpro.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-interpro.tsv seems to contain HTML -# Failure: output/tsv/pdb-interpro.tsv is not updated -> 2023-11-27T12:38:11 pdb-interpro +# Success: output/tsv/pdb-interpro.tsv is updated +> 2023-12-02T02:40:51 pdb-interpro ### Update TSV for pdb-pdb_ccd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-pdb_ccd.tsv is newer than config/pdb-pdb_ccd/config.yaml # File output/tsv/pdb-pdb_ccd.tsv has no timestamp file -# File output/tsv/pdb-pdb_ccd.tsv is created 9.442609731203333 days ago (will be updated when >5 days) +# File output/tsv/pdb-pdb_ccd.tsv is created 14.027795227184038 days ago (will be updated when >5 days) ## Update config/pdb-pdb_ccd/config.yaml => output/tsv/pdb-pdb_ccd.tsv -< 2023-11-27T12:38:11 pdb-pdb_ccd +< 2023-12-02T02:40:51 pdb-pdb_ccd togoid-config config/pdb-pdb_ccd update -# Error: output/tsv/pdb-pdb_ccd.tsv new file size per old 248 / 4665872 = 5.315190815350271e-05 < 0.5 -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pdb_ccd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pdb_ccd.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pdb_ccd.tsv seems to contain HTML -# Failure: output/tsv/pdb-pdb_ccd.tsv is not updated -> 2023-11-27T12:38:11 pdb-pdb_ccd +# Success: output/tsv/pdb-pdb_ccd.tsv is updated +> 2023-12-02T02:40:58 pdb-pdb_ccd ### Update TSV for pdb-pfam if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-pfam.tsv is newer than config/pdb-pfam/config.yaml # File output/tsv/pdb-pfam.tsv has no timestamp file -# File output/tsv/pdb-pfam.tsv is created 9.442600568187443 days ago (will be updated when >5 days) +# File output/tsv/pdb-pfam.tsv is created 14.027866782838275 days ago (will be updated when >5 days) ## Update config/pdb-pfam/config.yaml => output/tsv/pdb-pfam.tsv -< 2023-11-27T12:38:11 pdb-pfam +< 2023-12-02T02:40:58 pdb-pfam togoid-config config/pdb-pfam update -# Error: output/tsv/pdb-pfam.tsv new file size per old 248 / 4414345 = 5.618047524604443e-05 < 0.5 -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pfam.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-pfam.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-pfam.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-pfam.tsv seems to contain HTML -# Failure: output/tsv/pdb-pfam.tsv is not updated -> 2023-11-27T12:38:11 pdb-pfam +# Success: output/tsv/pdb-pfam.tsv is updated +> 2023-12-02T02:41:05 pdb-pfam ### Update TSV for pdb-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pdb-uniprot.tsv is newer than config/pdb-uniprot/config.yaml # File output/tsv/pdb-uniprot.tsv has no timestamp file -# File output/tsv/pdb-uniprot.tsv is created 9.442592269005347 days ago (will be updated when >5 days) +# File output/tsv/pdb-uniprot.tsv is created 14.027934013207869 days ago (will be updated when >5 days) ## Update config/pdb-uniprot/config.yaml => output/tsv/pdb-uniprot.tsv -< 2023-11-27T12:38:11 pdb-uniprot +< 2023-12-02T02:41:05 pdb-uniprot togoid-config config/pdb-uniprot update -# Error: output/tsv/pdb-uniprot.tsv new file size per old 248 / 4173296 = 5.9425451729280644e-05 < 0.5 -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pdb-uniprot.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pdb-uniprot.tsv seems to contain HTML -# Failure: output/tsv/pdb-uniprot.tsv is not updated -> 2023-11-27T12:38:12 pdb-uniprot +# Success: output/tsv/pdb-uniprot.tsv is updated +> 2023-12-02T02:41:10 pdb-uniprot ### Update TSV for prosite-prosite_prorule if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/prosite-prosite_prorule.tsv is newer than config/prosite-prosite_prorule/config.yaml # File output/tsv/prosite-prosite_prorule.tsv is newer than input/prosite/download.lock @@ -2197,413 +1421,181 @@ togoid-config config/pdb-uniprot update ### Update TSV for pubchem_compound-atc if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true # File output/tsv/pubchem_compound-atc.tsv is older than config/pubchem_compound-atc/config.yaml ## Update config/pubchem_compound-atc/config.yaml => output/tsv/pubchem_compound-atc.tsv -< 2023-11-27T12:38:12 pubchem_compound-atc +< 2023-12-02T02:41:10 pubchem_compound-atc togoid-config config/pubchem_compound-atc update -# Error: output/tsv/pubchem_compound-atc.tsv new file size per old 248 / 72636 = 0.003414284927584118 < 0.5 -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-atc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-atc.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-atc.tsv seems to contain HTML +# Error: output/tsv/pubchem_compound-atc.tsv new file size per old 28643 / 72636 = 0.39433614185803184 < 0.5 # Failure: output/tsv/pubchem_compound-atc.tsv is not updated -> 2023-11-27T12:38:12 pubchem_compound-atc +> 2023-12-02T02:41:15 pubchem_compound-atc ### Update TSV for pubchem_compound-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-chebi.tsv is newer than config/pubchem_compound-chebi/config.yaml # File output/tsv/pubchem_compound-chebi.tsv has no timestamp file -# File output/tsv/pubchem_compound-chebi.tsv is created 9.44255938135206 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-chebi.tsv is created 14.028006890208994 days ago (will be updated when >5 days) ## Update config/pubchem_compound-chebi/config.yaml => output/tsv/pubchem_compound-chebi.tsv -< 2023-11-27T12:38:12 pubchem_compound-chebi +< 2023-12-02T02:41:15 pubchem_compound-chebi togoid-config config/pubchem_compound-chebi update -# Error: output/tsv/pubchem_compound-chebi.tsv new file size per old 248 / 2127659 = 0.0001165600314712085 < 0.5 -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-chebi.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-chebi.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-chebi.tsv seems to contain HTML -# Failure: output/tsv/pubchem_compound-chebi.tsv is not updated -> 2023-11-27T12:38:13 pubchem_compound-chebi +# Success: output/tsv/pubchem_compound-chebi.tsv is updated +> 2023-12-02T02:41:55 pubchem_compound-chebi ### Update TSV for pubchem_compound-chembl_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-chembl_compound.tsv is newer than config/pubchem_compound-chembl_compound/config.yaml # File output/tsv/pubchem_compound-chembl_compound.tsv has no timestamp file -# File output/tsv/pubchem_compound-chembl_compound.tsv is created 9.442496054821262 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-chembl_compound.tsv is created 14.028408644038437 days ago (will be updated when >5 days) ## Update config/pubchem_compound-chembl_compound/config.yaml => output/tsv/pubchem_compound-chembl_compound.tsv -< 2023-11-27T12:38:13 pubchem_compound-chembl_compound +< 2023-12-02T02:41:55 pubchem_compound-chembl_compound togoid-config config/pubchem_compound-chembl_compound update -expr: non-integer argument -# Error: output/tsv/pubchem_compound-chembl_compound.tsv new file size per old 0 / 52771371 = 0.0 < 0.5 -# Error: Failed to create output/tsv/pubchem_compound-chembl_compound.tsv or created file was empty -# Failure: output/tsv/pubchem_compound-chembl_compound.tsv is not updated -> 2023-11-27T12:38:13 pubchem_compound-chembl_compound +# Success: output/tsv/pubchem_compound-chembl_compound.tsv is updated +> 2023-12-02T02:45:12 pubchem_compound-chembl_compound ### Update TSV for pubchem_compound-drugbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-drugbank.tsv is newer than config/pubchem_compound-drugbank/config.yaml # File output/tsv/pubchem_compound-drugbank.tsv has no timestamp file -# File output/tsv/pubchem_compound-drugbank.tsv is created 9.442495509587129 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-drugbank.tsv is created 14.030681056998496 days ago (will be updated when >5 days) ## Update config/pubchem_compound-drugbank/config.yaml => output/tsv/pubchem_compound-drugbank.tsv -< 2023-11-27T12:38:13 pubchem_compound-drugbank +< 2023-12-02T02:45:12 pubchem_compound-drugbank togoid-config config/pubchem_compound-drugbank update -# Error: output/tsv/pubchem_compound-drugbank.tsv new file size per old 248 / 165607 = 0.001497521240044201 < 0.5 -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-drugbank.tsv seems to contain HTML -# Failure: output/tsv/pubchem_compound-drugbank.tsv is not updated -> 2023-11-27T12:38:13 pubchem_compound-drugbank +# Success: output/tsv/pubchem_compound-drugbank.tsv is updated +> 2023-12-02T02:45:16 pubchem_compound-drugbank ### Update TSV for pubchem_compound-glytoucan if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_compound-glytoucan.tsv is newer than config/pubchem_compound-glytoucan/config.yaml # File output/tsv/pubchem_compound-glytoucan.tsv has no timestamp file -# File output/tsv/pubchem_compound-glytoucan.tsv is created 9.44249357419213 days ago (will be updated when >5 days) +# File output/tsv/pubchem_compound-glytoucan.tsv is created 14.030716289289767 days ago (will be updated when >5 days) ## Update config/pubchem_compound-glytoucan/config.yaml => output/tsv/pubchem_compound-glytoucan.tsv -< 2023-11-27T12:38:13 pubchem_compound-glytoucan +< 2023-12-02T02:45:16 pubchem_compound-glytoucan togoid-config config/pubchem_compound-glytoucan update -# Error: output/tsv/pubchem_compound-glytoucan.tsv new file size per old 248 / 577555 = 0.00042939633454822486 < 0.5 -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_compound-glytoucan.tsv seems to contain HTML -# Failure: output/tsv/pubchem_compound-glytoucan.tsv is not updated -> 2023-11-27T12:38:14 pubchem_compound-glytoucan -### Update TSV for pubchem_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# Success: output/tsv/pubchem_compound-glytoucan.tsv is updated +> 2023-12-02T02:45:17 pubchem_compound-glytoucan +### Update TSV for pubchem_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/pubchem_compound-inchi_key.tsv is newer than config/pubchem_compound-inchi_key/config.yaml # File output/tsv/pubchem_compound-inchi_key.tsv has no timestamp file -# File output/tsv/pubchem_compound-inchi_key.tsv is created 9.437238699044665 days ago (will be updated when >5 days) -## Update config/pubchem_compound-inchi_key/config.yaml => output/tsv/pubchem_compound-inchi_key.tsv -< 2023-11-27T12:38:14 pubchem_compound-inchi_key -togoid-config config/pubchem_compound-inchi_key update -# Success: output/tsv/pubchem_compound-inchi_key.tsv is updated -> 2023-11-27T12:45:03 pubchem_compound-inchi_key +# File output/tsv/pubchem_compound-inchi_key.tsv is created 4.583494575167384 days ago (will be updated when >5 days) +# => Preserving output/tsv/pubchem_compound-inchi_key.tsv ### Update TSV for pubchem_pathway-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-ncbigene.tsv is newer than config/pubchem_pathway-ncbigene/config.yaml # File output/tsv/pubchem_pathway-ncbigene.tsv has no timestamp file -# File output/tsv/pubchem_pathway-ncbigene.tsv is created 9.441967307950335 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-ncbigene.tsv is created 14.025461620244608 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-ncbigene/config.yaml => output/tsv/pubchem_pathway-ncbigene.tsv -< 2023-11-27T12:45:03 pubchem_pathway-ncbigene +< 2023-12-02T02:45:17 pubchem_pathway-ncbigene togoid-config config/pubchem_pathway-ncbigene update -# Error: output/tsv/pubchem_pathway-ncbigene.tsv new file size per old 248 / 386522 = 0.0006416193644863681 < 0.5 -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-ncbigene.tsv seems to contain HTML -# Failure: output/tsv/pubchem_pathway-ncbigene.tsv is not updated -> 2023-11-27T12:45:03 pubchem_pathway-ncbigene +# Success: output/tsv/pubchem_pathway-ncbigene.tsv is updated +> 2023-12-02T02:45:24 pubchem_pathway-ncbigene ### Update TSV for pubchem_pathway-pathbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-pathbank.tsv is newer than config/pubchem_pathway-pathbank/config.yaml # File output/tsv/pubchem_pathway-pathbank.tsv has no timestamp file -# File output/tsv/pubchem_pathway-pathbank.tsv is created 9.441965990160764 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-pathbank.tsv is created 14.025532054297997 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-pathbank/config.yaml => output/tsv/pubchem_pathway-pathbank.tsv -< 2023-11-27T12:45:03 pubchem_pathway-pathbank +< 2023-12-02T02:45:24 pubchem_pathway-pathbank togoid-config config/pubchem_pathway-pathbank update -# Error: output/tsv/pubchem_pathway-pathbank.tsv new file size per old 248 / 1318229 = 0.00018813119723507828 < 0.5 -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-pathbank.tsv seems to contain HTML -# Failure: output/tsv/pubchem_pathway-pathbank.tsv is not updated -> 2023-11-27T12:45:04 pubchem_pathway-pathbank +# Success: output/tsv/pubchem_pathway-pathbank.tsv is updated +> 2023-12-02T02:45:25 pubchem_pathway-pathbank ### Update TSV for pubchem_pathway-pubchem_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-pubchem_compound.tsv is newer than config/pubchem_pathway-pubchem_compound/config.yaml # File output/tsv/pubchem_pathway-pubchem_compound.tsv has no timestamp file -# File output/tsv/pubchem_pathway-pubchem_compound.tsv is created 9.44193827935397 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-pubchem_compound.tsv is created 14.025519016629456 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-pubchem_compound/config.yaml => output/tsv/pubchem_pathway-pubchem_compound.tsv -< 2023-11-27T12:45:04 pubchem_pathway-pubchem_compound +< 2023-12-02T02:45:25 pubchem_pathway-pubchem_compound togoid-config config/pubchem_pathway-pubchem_compound update -expr: non-integer argument -# Error: output/tsv/pubchem_pathway-pubchem_compound.tsv new file size per old 0 / 18535342 = 0.0 < 0.5 -# Error: Failed to create output/tsv/pubchem_pathway-pubchem_compound.tsv or created file was empty -# Failure: output/tsv/pubchem_pathway-pubchem_compound.tsv is not updated -> 2023-11-27T12:45:04 pubchem_pathway-pubchem_compound +# Success: output/tsv/pubchem_pathway-pubchem_compound.tsv is updated +> 2023-12-02T02:45:58 pubchem_pathway-pubchem_compound ### Update TSV for pubchem_pathway-reactome_pathway if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-reactome_pathway.tsv is newer than config/pubchem_pathway-reactome_pathway/config.yaml # File output/tsv/pubchem_pathway-reactome_pathway.tsv has no timestamp file -# File output/tsv/pubchem_pathway-reactome_pathway.tsv is created 9.44193784593229 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-reactome_pathway.tsv is created 14.02589122487163 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-reactome_pathway/config.yaml => output/tsv/pubchem_pathway-reactome_pathway.tsv -< 2023-11-27T12:45:04 pubchem_pathway-reactome_pathway +< 2023-12-02T02:45:58 pubchem_pathway-reactome_pathway togoid-config config/pubchem_pathway-reactome_pathway update -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv new file size per old 248 / 55502 = 0.004468307448380239 < 0.5 -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-reactome_pathway.tsv seems to contain HTML -# Failure: output/tsv/pubchem_pathway-reactome_pathway.tsv is not updated -> 2023-11-27T12:45:05 pubchem_pathway-reactome_pathway +# Success: output/tsv/pubchem_pathway-reactome_pathway.tsv is updated +> 2023-12-02T02:45:59 pubchem_pathway-reactome_pathway ### Update TSV for pubchem_pathway-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-uniprot.tsv is newer than config/pubchem_pathway-uniprot/config.yaml # File output/tsv/pubchem_pathway-uniprot.tsv has no timestamp file -# File output/tsv/pubchem_pathway-uniprot.tsv is created 9.441923740934167 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-uniprot.tsv is created 14.025885177165359 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-uniprot/config.yaml => output/tsv/pubchem_pathway-uniprot.tsv -< 2023-11-27T12:45:05 pubchem_pathway-uniprot +< 2023-12-02T02:45:59 pubchem_pathway-uniprot togoid-config config/pubchem_pathway-uniprot update -retrieve.sh: line 28: [: : integer expression expected -expr: non-integer argument -# Error: output/tsv/pubchem_pathway-uniprot.tsv new file size per old 0 / 9132367 = 0.0 < 0.5 -# Error: Failed to create output/tsv/pubchem_pathway-uniprot.tsv or created file was empty -# Failure: output/tsv/pubchem_pathway-uniprot.tsv is not updated -> 2023-11-27T12:45:05 pubchem_pathway-uniprot +# Success: output/tsv/pubchem_pathway-uniprot.tsv is updated +> 2023-12-02T02:46:37 pubchem_pathway-uniprot ### Update TSV for pubchem_pathway-wikipathways if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/pubchem_pathway-wikipathways.tsv is newer than config/pubchem_pathway-wikipathways/config.yaml # File output/tsv/pubchem_pathway-wikipathways.tsv has no timestamp file -# File output/tsv/pubchem_pathway-wikipathways.tsv is created 9.441923573363114 days ago (will be updated when >5 days) +# File output/tsv/pubchem_pathway-wikipathways.tsv is created 14.026327673101711 days ago (will be updated when >5 days) ## Update config/pubchem_pathway-wikipathways/config.yaml => output/tsv/pubchem_pathway-wikipathways.tsv -< 2023-11-27T12:45:05 pubchem_pathway-wikipathways +< 2023-12-02T02:46:37 pubchem_pathway-wikipathways togoid-config config/pubchem_pathway-wikipathways update -# Error: output/tsv/pubchem_pathway-wikipathways.tsv new file size per old 248 / 15771 = 0.015725064992708135 < 0.5 -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/pubchem_pathway-wikipathways.tsv seems to contain HTML -# Failure: output/tsv/pubchem_pathway-wikipathways.tsv is not updated -> 2023-11-27T12:45:05 pubchem_pathway-wikipathways -### Update TSV for reactome_pathway-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# Success: output/tsv/pubchem_pathway-wikipathways.tsv is updated +> 2023-12-02T02:46:38 pubchem_pathway-wikipathways +### Update TSV for reactome_pathway-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_pathway-chebi.tsv is newer than config/reactome_pathway-chebi/config.yaml # File output/tsv/reactome_pathway-chebi.tsv has no timestamp file -# File output/tsv/reactome_pathway-chebi.tsv is created 9.441919580897732 days ago (will be updated when >5 days) -## Update config/reactome_pathway-chebi/config.yaml => output/tsv/reactome_pathway-chebi.tsv -< 2023-11-27T12:45:05 reactome_pathway-chebi -togoid-config config/reactome_pathway-chebi update -# Success: output/tsv/reactome_pathway-chebi.tsv is updated -> 2023-11-27T12:45:06 reactome_pathway-chebi +# File output/tsv/reactome_pathway-chebi.tsv is created 4.584404829952975 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_pathway-chebi.tsv ### Update TSV for reactome_pathway-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-go.tsv is newer than config/reactome_pathway-go/config.yaml # File output/tsv/reactome_pathway-go.tsv has no timestamp file -# File output/tsv/reactome_pathway-go.tsv is created 9.441920629104052 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-go.tsv is created 14.026325282578773 days ago (will be updated when >5 days) ## Update config/reactome_pathway-go/config.yaml => output/tsv/reactome_pathway-go.tsv -< 2023-11-27T12:45:06 reactome_pathway-go +< 2023-12-02T02:46:38 reactome_pathway-go togoid-config config/reactome_pathway-go update -# Error: output/tsv/reactome_pathway-go.tsv new file size per old 248 / 276996 = 0.0008953197880113792 < 0.5 -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-go.tsv seems to contain HTML -# Failure: output/tsv/reactome_pathway-go.tsv is not updated -> 2023-11-27T12:45:06 reactome_pathway-go -### Update TSV for reactome_pathway-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# Success: output/tsv/reactome_pathway-go.tsv is updated +> 2023-12-02T02:46:41 reactome_pathway-go +### Update TSV for reactome_pathway-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_pathway-iuphar_ligand.tsv is newer than config/reactome_pathway-iuphar_ligand/config.yaml # File output/tsv/reactome_pathway-iuphar_ligand.tsv has no timestamp file -# File output/tsv/reactome_pathway-iuphar_ligand.tsv is created 9.441920547165878 days ago (will be updated when >5 days) -## Update config/reactome_pathway-iuphar_ligand/config.yaml => output/tsv/reactome_pathway-iuphar_ligand.tsv -< 2023-11-27T12:45:06 reactome_pathway-iuphar_ligand -togoid-config config/reactome_pathway-iuphar_ligand update -# Success: output/tsv/reactome_pathway-iuphar_ligand.tsv is updated -> 2023-11-27T12:45:07 reactome_pathway-iuphar_ligand -### Update TSV for reactome_pathway-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/reactome_pathway-iuphar_ligand.tsv is created 4.584423564041192 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_pathway-iuphar_ligand.tsv +### Update TSV for reactome_pathway-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_pathway-mirbase.tsv is newer than config/reactome_pathway-mirbase/config.yaml # File output/tsv/reactome_pathway-mirbase.tsv has no timestamp file -# File output/tsv/reactome_pathway-mirbase.tsv is created 9.44192164085124 days ago (will be updated when >5 days) -## Update config/reactome_pathway-mirbase/config.yaml => output/tsv/reactome_pathway-mirbase.tsv -< 2023-11-27T12:45:07 reactome_pathway-mirbase -togoid-config config/reactome_pathway-mirbase update -# Success: output/tsv/reactome_pathway-mirbase.tsv is updated -> 2023-11-27T12:45:07 reactome_pathway-mirbase +# File output/tsv/reactome_pathway-mirbase.tsv is created 4.5844213955460305 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_pathway-mirbase.tsv ### Update TSV for reactome_pathway-reactome_reaction if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_pathway-reactome_reaction.tsv is newer than config/reactome_pathway-reactome_reaction/config.yaml # File output/tsv/reactome_pathway-reactome_reaction.tsv has no timestamp file -# File output/tsv/reactome_pathway-reactome_reaction.tsv is created 9.441906508005127 days ago (will be updated when >5 days) +# File output/tsv/reactome_pathway-reactome_reaction.tsv is created 14.026327886854016 days ago (will be updated when >5 days) ## Update config/reactome_pathway-reactome_reaction/config.yaml => output/tsv/reactome_pathway-reactome_reaction.tsv -< 2023-11-27T12:45:07 reactome_pathway-reactome_reaction +< 2023-12-02T02:46:41 reactome_pathway-reactome_reaction togoid-config config/reactome_pathway-reactome_reaction update -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv new file size per old 248 / 10770993 = 2.3024803748363775e-05 < 0.5 -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_pathway-reactome_reaction.tsv seems to contain HTML -# Failure: output/tsv/reactome_pathway-reactome_reaction.tsv is not updated -> 2023-11-27T12:45:07 reactome_pathway-reactome_reaction -### Update TSV for reactome_pathway-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# Success: output/tsv/reactome_pathway-reactome_reaction.tsv is updated +> 2023-12-02T02:46:46 reactome_pathway-reactome_reaction +### Update TSV for reactome_pathway-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_pathway-uniprot.tsv is newer than config/reactome_pathway-uniprot/config.yaml # File output/tsv/reactome_pathway-uniprot.tsv has no timestamp file -# File output/tsv/reactome_pathway-uniprot.tsv is created 9.441889265959722 days ago (will be updated when >5 days) -## Update config/reactome_pathway-uniprot/config.yaml => output/tsv/reactome_pathway-uniprot.tsv -< 2023-11-27T12:45:07 reactome_pathway-uniprot -togoid-config config/reactome_pathway-uniprot update -# Success: output/tsv/reactome_pathway-uniprot.tsv is updated -> 2023-11-27T12:45:09 reactome_pathway-uniprot -### Update TSV for reactome_reaction-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/reactome_pathway-uniprot.tsv is created 4.584463827353947 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_pathway-uniprot.tsv +### Update TSV for reactome_reaction-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_reaction-chebi.tsv is newer than config/reactome_reaction-chebi/config.yaml # File output/tsv/reactome_reaction-chebi.tsv has no timestamp file -# File output/tsv/reactome_reaction-chebi.tsv is created 9.441896208492638 days ago (will be updated when >5 days) -## Update config/reactome_reaction-chebi/config.yaml => output/tsv/reactome_reaction-chebi.tsv -< 2023-11-27T12:45:09 reactome_reaction-chebi -togoid-config config/reactome_reaction-chebi update -# Success: output/tsv/reactome_reaction-chebi.tsv is updated -> 2023-11-27T12:45:09 reactome_reaction-chebi +# File output/tsv/reactome_reaction-chebi.tsv is created 4.584457346795277 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_reaction-chebi.tsv ### Update TSV for reactome_reaction-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/reactome_reaction-go.tsv is newer than config/reactome_reaction-go/config.yaml # File output/tsv/reactome_reaction-go.tsv has no timestamp file -# File output/tsv/reactome_reaction-go.tsv is created 9.44189814799169 days ago (will be updated when >5 days) +# File output/tsv/reactome_reaction-go.tsv is created 14.026355370586943 days ago (will be updated when >5 days) ## Update config/reactome_reaction-go/config.yaml => output/tsv/reactome_reaction-go.tsv -< 2023-11-27T12:45:09 reactome_reaction-go +< 2023-12-02T02:46:46 reactome_reaction-go togoid-config config/reactome_reaction-go update -# Error: output/tsv/reactome_reaction-go.tsv new file size per old 248 / 71679 = 0.003459869696842869 < 0.5 -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_reaction-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML 503 Service Unavailable -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

Service Unavailable

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML

The server is temporarily unable to service your -# Error: output/tsv/reactome_reaction-go.tsv seems to be malformed request due to maintenance downtime or capacity -# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML problems. Please try again later.

-# Error: output/tsv/reactome_reaction-go.tsv seems to contain HTML -# Failure: output/tsv/reactome_reaction-go.tsv is not updated -> 2023-11-27T12:45:10 reactome_reaction-go -### Update TSV for reactome_reaction-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# Success: output/tsv/reactome_reaction-go.tsv is updated +> 2023-12-02T02:46:47 reactome_reaction-go +### Update TSV for reactome_reaction-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_reaction-iuphar_ligand.tsv is newer than config/reactome_reaction-iuphar_ligand/config.yaml # File output/tsv/reactome_reaction-iuphar_ligand.tsv has no timestamp file -# File output/tsv/reactome_reaction-iuphar_ligand.tsv is created 9.44189921366927 days ago (will be updated when >5 days) -## Update config/reactome_reaction-iuphar_ligand/config.yaml => output/tsv/reactome_reaction-iuphar_ligand.tsv -< 2023-11-27T12:45:10 reactome_reaction-iuphar_ligand -togoid-config config/reactome_reaction-iuphar_ligand update -# Success: output/tsv/reactome_reaction-iuphar_ligand.tsv is updated -> 2023-11-27T12:45:10 reactome_reaction-iuphar_ligand -### Update TSV for reactome_reaction-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/reactome_reaction-iuphar_ligand.tsv is created 4.584456261596261 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_reaction-iuphar_ligand.tsv +### Update TSV for reactome_reaction-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_reaction-mirbase.tsv is newer than config/reactome_reaction-mirbase/config.yaml # File output/tsv/reactome_reaction-mirbase.tsv has no timestamp file -# File output/tsv/reactome_reaction-mirbase.tsv is created 9.441899407429885 days ago (will be updated when >5 days) -## Update config/reactome_reaction-mirbase/config.yaml => output/tsv/reactome_reaction-mirbase.tsv -< 2023-11-27T12:45:10 reactome_reaction-mirbase -togoid-config config/reactome_reaction-mirbase update -# Success: output/tsv/reactome_reaction-mirbase.tsv is updated -> 2023-11-27T12:45:10 reactome_reaction-mirbase -### Update TSV for reactome_reaction-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/reactome_reaction-mirbase.tsv is created 4.584453808673553 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_reaction-mirbase.tsv +### Update TSV for reactome_reaction-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/reactome_reaction-uniprot.tsv is newer than config/reactome_reaction-uniprot/config.yaml # File output/tsv/reactome_reaction-uniprot.tsv has no timestamp file -# File output/tsv/reactome_reaction-uniprot.tsv is created 9.441881448701054 days ago (will be updated when >5 days) -## Update config/reactome_reaction-uniprot/config.yaml => output/tsv/reactome_reaction-uniprot.tsv -< 2023-11-27T12:45:10 reactome_reaction-uniprot -togoid-config config/reactome_reaction-uniprot update -# Success: output/tsv/reactome_reaction-uniprot.tsv is updated -> 2023-11-27T12:45:11 reactome_reaction-uniprot +# File output/tsv/reactome_reaction-uniprot.tsv is created 4.584440250076759 days ago (will be updated when >5 days) +# => Preserving output/tsv/reactome_reaction-uniprot.tsv ### Update TSV for refseq_protein-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/refseq_protein-uniprot.tsv is newer than config/refseq_protein-uniprot/config.yaml # File output/tsv/refseq_protein-uniprot.tsv is older than input/refseq_protein/download.lock ## Update config/refseq_protein-uniprot/config.yaml => output/tsv/refseq_protein-uniprot.tsv -< 2023-11-27T12:45:11 refseq_protein-uniprot +< 2023-12-02T02:46:47 refseq_protein-uniprot togoid-config config/refseq_protein-uniprot update # Success: output/tsv/refseq_protein-uniprot.tsv is updated -> 2023-11-27T12:53:34 refseq_protein-uniprot +> 2023-12-02T02:53:15 refseq_protein-uniprot ### Update TSV for refseq_rna-dbsnp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/refseq_rna-dbsnp.tsv is newer than config/refseq_rna-dbsnp/config.yaml # File output/tsv/refseq_rna-dbsnp.tsv is newer than input/refseq_rna/download.lock @@ -2656,284 +1648,180 @@ togoid-config config/refseq_protein-uniprot update # File output/tsv/rhea-uniprot.tsv is newer than config/rhea-uniprot/config.yaml # File output/tsv/rhea-uniprot.tsv is newer than input/rhea/download.lock # => Preserving output/tsv/rhea-uniprot.tsv -### Update TSV for sra_accession-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +### Update TSV for sra_accession-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_accession-bioproject.tsv is newer than config/sra_accession-bioproject/config.yaml # File output/tsv/sra_accession-bioproject.tsv has no timestamp file -# File output/tsv/sra_accession-bioproject.tsv is created 9.418192080978287 days ago (will be updated when >5 days) -## Update config/sra_accession-bioproject/config.yaml => output/tsv/sra_accession-bioproject.tsv -< 2023-11-27T12:53:34 sra_accession-bioproject -togoid-config config/sra_accession-bioproject update -# Success: output/tsv/sra_accession-bioproject.tsv is updated -> 2023-11-27T12:55:30 sra_accession-bioproject -### Update TSV for sra_accession-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_accession-bioproject.tsv is created 4.581769426712627 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_accession-bioproject.tsv +### Update TSV for sra_accession-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_accession-biosample.tsv is newer than config/sra_accession-biosample/config.yaml # File output/tsv/sra_accession-biosample.tsv has no timestamp file -# File output/tsv/sra_accession-biosample.tsv is created 9.414844563627025 days ago (will be updated when >5 days) -## Update config/sra_accession-biosample/config.yaml => output/tsv/sra_accession-biosample.tsv -< 2023-11-27T12:55:30 sra_accession-biosample -togoid-config config/sra_accession-biosample update -# Success: output/tsv/sra_accession-biosample.tsv is updated -> 2023-11-27T13:02:17 sra_accession-biosample -### Update TSV for sra_accession-sra_analysis if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_accession-biosample.tsv is created 4.5770588076504515 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_accession-biosample.tsv +### Update TSV for sra_accession-sra_analysis if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_accession-sra_analysis.tsv is newer than config/sra_accession-sra_analysis/config.yaml # File output/tsv/sra_accession-sra_analysis.tsv has no timestamp file -# File output/tsv/sra_accession-sra_analysis.tsv is created 9.418876992026656 days ago (will be updated when >5 days) -## Update config/sra_accession-sra_analysis/config.yaml => output/tsv/sra_accession-sra_analysis.tsv -< 2023-11-27T13:02:17 sra_accession-sra_analysis -togoid-config config/sra_accession-sra_analysis update -# Success: output/tsv/sra_accession-sra_analysis.tsv is updated -> 2023-11-27T13:03:17 sra_accession-sra_analysis -### Update TSV for sra_accession-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_accession-sra_analysis.tsv is created 4.576369179489283 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_accession-sra_analysis.tsv +### Update TSV for sra_accession-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_accession-sra_experiment.tsv is newer than config/sra_accession-sra_experiment/config.yaml # File output/tsv/sra_accession-sra_experiment.tsv has no timestamp file -# File output/tsv/sra_accession-sra_experiment.tsv is created 9.415412825689723 days ago (will be updated when >5 days) -## Update config/sra_accession-sra_experiment/config.yaml => output/tsv/sra_accession-sra_experiment.tsv -< 2023-11-27T13:03:17 sra_accession-sra_experiment -togoid-config config/sra_accession-sra_experiment update -# Success: output/tsv/sra_accession-sra_experiment.tsv is updated -> 2023-11-27T13:09:20 sra_accession-sra_experiment -### Update TSV for sra_accession-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_accession-sra_experiment.tsv is created 4.572166542036064 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_accession-sra_experiment.tsv +### Update TSV for sra_accession-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_accession-sra_project.tsv is newer than config/sra_accession-sra_project/config.yaml # File output/tsv/sra_accession-sra_project.tsv has no timestamp file -# File output/tsv/sra_accession-sra_project.tsv is created 9.418937499314781 days ago (will be updated when >5 days) -## Update config/sra_accession-sra_project/config.yaml => output/tsv/sra_accession-sra_project.tsv -< 2023-11-27T13:09:20 sra_accession-sra_project -togoid-config config/sra_accession-sra_project update -# Success: output/tsv/sra_accession-sra_project.tsv is updated -> 2023-11-27T13:10:23 sra_accession-sra_project -### Update TSV for sra_accession-sra_run if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_accession-sra_project.tsv is created 4.571433073612118 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_accession-sra_project.tsv +### Update TSV for sra_accession-sra_run if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_accession-sra_run.tsv is newer than config/sra_accession-sra_run/config.yaml # File output/tsv/sra_accession-sra_run.tsv has no timestamp file -# File output/tsv/sra_accession-sra_run.tsv is created 9.414936704748612 days ago (will be updated when >5 days) -## Update config/sra_accession-sra_run/config.yaml => output/tsv/sra_accession-sra_run.tsv -< 2023-11-27T13:10:23 sra_accession-sra_run -togoid-config config/sra_accession-sra_run update -# Success: output/tsv/sra_accession-sra_run.tsv is updated -> 2023-11-27T13:17:08 sra_accession-sra_run -### Update TSV for sra_accession-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_accession-sra_run.tsv is created 4.566745580670996 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_accession-sra_run.tsv +### Update TSV for sra_accession-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_accession-sra_sample.tsv is newer than config/sra_accession-sra_sample/config.yaml # File output/tsv/sra_accession-sra_sample.tsv has no timestamp file -# File output/tsv/sra_accession-sra_sample.tsv is created 9.415620660973426 days ago (will be updated when >5 days) -## Update config/sra_accession-sra_sample/config.yaml => output/tsv/sra_accession-sra_sample.tsv -< 2023-11-27T13:17:08 sra_accession-sra_sample -togoid-config config/sra_accession-sra_sample update -# Success: output/tsv/sra_accession-sra_sample.tsv is updated -> 2023-11-27T13:22:44 sra_accession-sra_sample -### Update TSV for sra_experiment-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_accession-sra_sample.tsv is created 4.562853035198287 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_accession-sra_sample.tsv +### Update TSV for sra_experiment-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_experiment-bioproject.tsv is newer than config/sra_experiment-bioproject/config.yaml # File output/tsv/sra_experiment-bioproject.tsv has no timestamp file -# File output/tsv/sra_experiment-bioproject.tsv is created 9.417188902364918 days ago (will be updated when >5 days) -## Update config/sra_experiment-bioproject/config.yaml => output/tsv/sra_experiment-bioproject.tsv -< 2023-11-27T13:22:44 sra_experiment-bioproject -togoid-config config/sra_experiment-bioproject update -# Success: output/tsv/sra_experiment-bioproject.tsv is updated -> 2023-11-27T13:25:57 sra_experiment-bioproject -### Update TSV for sra_experiment-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_experiment-bioproject.tsv is created 4.560624239337789 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_experiment-bioproject.tsv +### Update TSV for sra_experiment-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_experiment-biosample.tsv is newer than config/sra_experiment-biosample/config.yaml # File output/tsv/sra_experiment-biosample.tsv has no timestamp file -# File output/tsv/sra_experiment-biosample.tsv is created 9.417174075532929 days ago (will be updated when >5 days) -## Update config/sra_experiment-biosample/config.yaml => output/tsv/sra_experiment-biosample.tsv -< 2023-11-27T13:25:57 sra_experiment-biosample -togoid-config config/sra_experiment-biosample update -# Success: output/tsv/sra_experiment-biosample.tsv is updated -> 2023-11-27T13:29:00 sra_experiment-biosample -### Update TSV for sra_experiment-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_experiment-biosample.tsv is created 4.558512388305104 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_experiment-biosample.tsv +### Update TSV for sra_experiment-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_experiment-sra_project.tsv is newer than config/sra_experiment-sra_project/config.yaml # File output/tsv/sra_experiment-sra_project.tsv has no timestamp file -# File output/tsv/sra_experiment-sra_project.tsv is created 9.417432167318808 days ago (will be updated when >5 days) -## Update config/sra_experiment-sra_project/config.yaml => output/tsv/sra_experiment-sra_project.tsv -< 2023-11-27T13:29:00 sra_experiment-sra_project -togoid-config config/sra_experiment-sra_project update -# Success: output/tsv/sra_experiment-sra_project.tsv is updated -> 2023-11-27T13:31:37 sra_experiment-sra_project -### Update TSV for sra_experiment-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_experiment-sra_project.tsv is created 4.556688155086377 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_experiment-sra_project.tsv +### Update TSV for sra_experiment-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_experiment-sra_sample.tsv is newer than config/sra_experiment-sra_sample/config.yaml # File output/tsv/sra_experiment-sra_sample.tsv has no timestamp file -# File output/tsv/sra_experiment-sra_sample.tsv is created 9.41742464166374 days ago (will be updated when >5 days) -## Update config/sra_experiment-sra_sample/config.yaml => output/tsv/sra_experiment-sra_sample.tsv -< 2023-11-27T13:31:37 sra_experiment-sra_sample -togoid-config config/sra_experiment-sra_sample update -# Success: output/tsv/sra_experiment-sra_sample.tsv is updated -> 2023-11-27T13:34:07 sra_experiment-sra_sample -### Update TSV for sra_project-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_experiment-sra_sample.tsv is created 4.5549521399933335 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_experiment-sra_sample.tsv +### Update TSV for sra_project-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_project-bioproject.tsv is newer than config/sra_project-bioproject/config.yaml # File output/tsv/sra_project-bioproject.tsv has no timestamp file -# File output/tsv/sra_project-bioproject.tsv is created 9.418482026567673 days ago (will be updated when >5 days) -## Update config/sra_project-bioproject/config.yaml => output/tsv/sra_project-bioproject.tsv -< 2023-11-27T13:34:07 sra_project-bioproject -togoid-config config/sra_project-bioproject update -# Success: output/tsv/sra_project-bioproject.tsv is updated -> 2023-11-27T13:35:07 sra_project-bioproject -### Update TSV for sra_run-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_project-bioproject.tsv is created 4.554255437616285 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_project-bioproject.tsv +### Update TSV for sra_run-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_run-bioproject.tsv is newer than config/sra_run-bioproject/config.yaml # File output/tsv/sra_run-bioproject.tsv has no timestamp file -# File output/tsv/sra_run-bioproject.tsv is created 9.41664753394756 days ago (will be updated when >5 days) -## Update config/sra_run-bioproject/config.yaml => output/tsv/sra_run-bioproject.tsv -< 2023-11-27T13:35:07 sra_run-bioproject -togoid-config config/sra_run-bioproject update -# Success: output/tsv/sra_run-bioproject.tsv is updated -> 2023-11-27T13:38:46 sra_run-bioproject -### Update TSV for sra_run-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_run-bioproject.tsv is created 4.551722927016076 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_run-bioproject.tsv +### Update TSV for sra_run-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_run-biosample.tsv is newer than config/sra_run-biosample/config.yaml # File output/tsv/sra_run-biosample.tsv has no timestamp file -# File output/tsv/sra_run-biosample.tsv is created 9.416744089597314 days ago (will be updated when >5 days) -## Update config/sra_run-biosample/config.yaml => output/tsv/sra_run-biosample.tsv -< 2023-11-27T13:38:46 sra_run-biosample -togoid-config config/sra_run-biosample update -# Success: output/tsv/sra_run-biosample.tsv is updated -> 2023-11-27T13:42:11 sra_run-biosample -### Update TSV for sra_run-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_run-biosample.tsv is created 4.549346029329896 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_run-biosample.tsv +### Update TSV for sra_run-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_run-sra_experiment.tsv is newer than config/sra_run-sra_experiment/config.yaml # File output/tsv/sra_run-sra_experiment.tsv has no timestamp file -# File output/tsv/sra_run-sra_experiment.tsv is created 9.417267051417847 days ago (will be updated when >5 days) -## Update config/sra_run-sra_experiment/config.yaml => output/tsv/sra_run-sra_experiment.tsv -< 2023-11-27T13:42:11 sra_run-sra_experiment -togoid-config config/sra_run-sra_experiment update -# Success: output/tsv/sra_run-sra_experiment.tsv is updated -> 2023-11-27T13:44:50 sra_run-sra_experiment -### Update TSV for sra_run-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_run-sra_experiment.tsv is created 4.547515545993461 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_run-sra_experiment.tsv +### Update TSV for sra_run-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_run-sra_project.tsv is newer than config/sra_run-sra_project/config.yaml # File output/tsv/sra_run-sra_project.tsv has no timestamp file -# File output/tsv/sra_run-sra_project.tsv is created 9.417114349156504 days ago (will be updated when >5 days) -## Update config/sra_run-sra_project/config.yaml => output/tsv/sra_run-sra_project.tsv -< 2023-11-27T13:44:50 sra_run-sra_project -togoid-config config/sra_run-sra_project update -# Success: output/tsv/sra_run-sra_project.tsv is updated -> 2023-11-27T13:47:46 sra_run-sra_project -### Update TSV for sra_run-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_run-sra_project.tsv is created 4.545476461740289 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_run-sra_project.tsv +### Update TSV for sra_run-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_run-sra_sample.tsv is newer than config/sra_run-sra_sample/config.yaml # File output/tsv/sra_run-sra_sample.tsv has no timestamp file -# File output/tsv/sra_run-sra_sample.tsv is created 9.417243391113345 days ago (will be updated when >5 days) -## Update config/sra_run-sra_sample/config.yaml => output/tsv/sra_run-sra_sample.tsv -< 2023-11-27T13:47:46 sra_run-sra_sample -togoid-config config/sra_run-sra_sample update -# Success: output/tsv/sra_run-sra_sample.tsv is updated -> 2023-11-27T13:50:44 sra_run-sra_sample -### Update TSV for sra_sample-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/sra_run-sra_sample.tsv is created 4.543414935105579 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_run-sra_sample.tsv +### Update TSV for sra_sample-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/sra_sample-biosample.tsv is newer than config/sra_sample-biosample/config.yaml # File output/tsv/sra_sample-biosample.tsv has no timestamp file -# File output/tsv/sra_sample-biosample.tsv is created 9.417389863663958 days ago (will be updated when >5 days) -## Update config/sra_sample-biosample/config.yaml => output/tsv/sra_sample-biosample.tsv -< 2023-11-27T13:50:44 sra_sample-biosample -togoid-config config/sra_sample-biosample update -# Success: output/tsv/sra_sample-biosample.tsv is updated -> 2023-11-27T13:53:27 sra_sample-biosample +# File output/tsv/sra_sample-biosample.tsv is created 4.541525539389179 days ago (will be updated when >5 days) +# => Preserving output/tsv/sra_sample-biosample.tsv ### Update TSV for swisslipids-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/swisslipids-chebi.tsv is newer than config/swisslipids-chebi/config.yaml # File output/tsv/swisslipids-chebi.tsv is older than input/swisslipids/download.lock ## Update config/swisslipids-chebi/config.yaml => output/tsv/swisslipids-chebi.tsv -< 2023-11-27T13:53:27 swisslipids-chebi +< 2023-12-02T02:53:15 swisslipids-chebi togoid-config config/swisslipids-chebi update # Success: output/tsv/swisslipids-chebi.tsv is updated -> 2023-11-27T13:53:41 swisslipids-chebi +> 2023-12-02T02:53:29 swisslipids-chebi ### Update TSV for swisslipids-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/swisslipids-hmdb.tsv is newer than config/swisslipids-hmdb/config.yaml # File output/tsv/swisslipids-hmdb.tsv is older than input/swisslipids/download.lock ## Update config/swisslipids-hmdb/config.yaml => output/tsv/swisslipids-hmdb.tsv -< 2023-11-27T13:53:41 swisslipids-hmdb +< 2023-12-02T02:53:29 swisslipids-hmdb togoid-config config/swisslipids-hmdb update # Success: output/tsv/swisslipids-hmdb.tsv is updated -> 2023-11-27T13:53:55 swisslipids-hmdb +> 2023-12-02T02:53:43 swisslipids-hmdb ### Update TSV for swisslipids-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/swisslipids-inchi_key.tsv is newer than config/swisslipids-inchi_key/config.yaml # File output/tsv/swisslipids-inchi_key.tsv is older than input/swisslipids/download.lock ## Update config/swisslipids-inchi_key/config.yaml => output/tsv/swisslipids-inchi_key.tsv -< 2023-11-27T13:53:55 swisslipids-inchi_key +< 2023-12-02T02:53:43 swisslipids-inchi_key togoid-config config/swisslipids-inchi_key update # Success: output/tsv/swisslipids-inchi_key.tsv is updated -> 2023-11-27T13:54:07 swisslipids-inchi_key +> 2023-12-02T02:53:55 swisslipids-inchi_key ### Update TSV for taxonomy-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/taxonomy-pubmed.tsv is newer than config/taxonomy-pubmed/config.yaml # File output/tsv/taxonomy-pubmed.tsv is older than input/taxonomy/download.lock ## Update config/taxonomy-pubmed/config.yaml => output/tsv/taxonomy-pubmed.tsv -< 2023-11-27T13:54:07 taxonomy-pubmed +< 2023-12-02T02:53:55 taxonomy-pubmed togoid-config config/taxonomy-pubmed update awk: cmd. line:1: warning: escape sequence `\|' treated as plain `|' # Success: output/tsv/taxonomy-pubmed.tsv is updated -> 2023-11-27T13:54:08 taxonomy-pubmed +> 2023-12-02T02:53:56 taxonomy-pubmed ### Update TSV for togovar-clinvar if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true # File output/tsv/togovar-clinvar.tsv is newer than config/togovar-clinvar/config.yaml # File output/tsv/togovar-clinvar.tsv has no timestamp file -# File output/tsv/togovar-clinvar.tsv is created 30.70250198616682 days ago (will be updated when >5 days) +# File output/tsv/togovar-clinvar.tsv is created 35.24403178903257 days ago (will be updated when >5 days) ## Update config/togovar-clinvar/config.yaml => output/tsv/togovar-clinvar.tsv -< 2023-11-27T13:54:08 togovar-clinvar +< 2023-12-02T02:53:56 togovar-clinvar togoid-config config/togovar-clinvar update # Error: output/tsv/togovar-clinvar.tsv new file size per old 0 / 13681182 = 0.0 < 0.5 # Error: Failed to create output/tsv/togovar-clinvar.tsv or created file was empty # Failure: output/tsv/togovar-clinvar.tsv is not updated -> 2023-11-27T13:54:42 togovar-clinvar -### Update TSV for togovar-dbsnp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +> 2023-12-02T02:54:22 togovar-clinvar +### Update TSV for togovar-dbsnp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/togovar-dbsnp.tsv is newer than config/togovar-dbsnp/config.yaml # File output/tsv/togovar-dbsnp.tsv has no timestamp file -# File output/tsv/togovar-dbsnp.tsv is created 9.418894656667593 days ago (will be updated when >5 days) -## Update config/togovar-dbsnp/config.yaml => output/tsv/togovar-dbsnp.tsv -< 2023-11-27T13:54:42 togovar-dbsnp -togoid-config config/togovar-dbsnp update -# Success: output/tsv/togovar-dbsnp.tsv is updated -> 2023-11-27T13:55:18 togovar-dbsnp -### Update TSV for togovar-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/togovar-dbsnp.tsv is created 4.54102354770721 days ago (will be updated when >5 days) +# => Preserving output/tsv/togovar-dbsnp.tsv +### Update TSV for togovar-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/togovar-ensembl_gene.tsv is newer than config/togovar-ensembl_gene/config.yaml # File output/tsv/togovar-ensembl_gene.tsv has no timestamp file -# File output/tsv/togovar-ensembl_gene.tsv is created 9.41889013402213 days ago (will be updated when >5 days) -## Update config/togovar-ensembl_gene/config.yaml => output/tsv/togovar-ensembl_gene.tsv -< 2023-11-27T13:55:18 togovar-ensembl_gene -togoid-config config/togovar-ensembl_gene update -# Success: output/tsv/togovar-ensembl_gene.tsv is updated -> 2023-11-27T13:56:13 togovar-ensembl_gene -### Update TSV for togovar-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/togovar-ensembl_gene.tsv is created 4.540382588975139 days ago (will be updated when >5 days) +# => Preserving output/tsv/togovar-ensembl_gene.tsv +### Update TSV for togovar-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/togovar-ensembl_transcript.tsv is newer than config/togovar-ensembl_transcript/config.yaml # File output/tsv/togovar-ensembl_transcript.tsv has no timestamp file -# File output/tsv/togovar-ensembl_transcript.tsv is created 9.41785100667287 days ago (will be updated when >5 days) -## Update config/togovar-ensembl_transcript/config.yaml => output/tsv/togovar-ensembl_transcript.tsv -< 2023-11-27T13:56:13 togovar-ensembl_transcript -togoid-config config/togovar-ensembl_transcript update -# Success: output/tsv/togovar-ensembl_transcript.tsv is updated -> 2023-11-27T13:59:07 togovar-ensembl_transcript -### Update TSV for togovar-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/togovar-ensembl_transcript.tsv is created 4.538368310324884 days ago (will be updated when >5 days) +# => Preserving output/tsv/togovar-ensembl_transcript.tsv +### Update TSV for togovar-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/togovar-hgnc.tsv is newer than config/togovar-hgnc/config.yaml # File output/tsv/togovar-hgnc.tsv has no timestamp file -# File output/tsv/togovar-hgnc.tsv is created 9.41959130347007 days ago (will be updated when >5 days) -## Update config/togovar-hgnc/config.yaml => output/tsv/togovar-hgnc.tsv -< 2023-11-27T13:59:07 togovar-hgnc -togoid-config config/togovar-hgnc update -# Success: output/tsv/togovar-hgnc.tsv is updated -> 2023-11-27T13:59:35 togovar-hgnc -### Update TSV for togovar-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/togovar-hgnc.tsv is created 4.538051142332501 days ago (will be updated when >5 days) +# => Preserving output/tsv/togovar-hgnc.tsv +### Update TSV for togovar-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/togovar-ncbigene.tsv is newer than config/togovar-ncbigene/config.yaml # File output/tsv/togovar-ncbigene.tsv has no timestamp file -# File output/tsv/togovar-ncbigene.tsv is created 9.419640470619271 days ago (will be updated when >5 days) -## Update config/togovar-ncbigene/config.yaml => output/tsv/togovar-ncbigene.tsv -< 2023-11-27T13:59:35 togovar-ncbigene -togoid-config config/togovar-ncbigene update -# Success: output/tsv/togovar-ncbigene.tsv is updated -> 2023-11-27T13:59:58 togovar-ncbigene -### Update TSV for togovar-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/togovar-ncbigene.tsv is created 4.537774132105324 days ago (will be updated when >5 days) +# => Preserving output/tsv/togovar-ncbigene.tsv +### Update TSV for togovar-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/togovar-pubmed.tsv is newer than config/togovar-pubmed/config.yaml # File output/tsv/togovar-pubmed.tsv has no timestamp file -# File output/tsv/togovar-pubmed.tsv is created 9.419907071891389 days ago (will be updated when >5 days) -## Update config/togovar-pubmed/config.yaml => output/tsv/togovar-pubmed.tsv -< 2023-11-27T13:59:58 togovar-pubmed -togoid-config config/togovar-pubmed update -# Success: output/tsv/togovar-pubmed.tsv is updated -> 2023-11-27T13:59:59 togovar-pubmed -### Update TSV for togovar-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/togovar-pubmed.tsv is created 4.537762216307661 days ago (will be updated when >5 days) +# => Preserving output/tsv/togovar-pubmed.tsv +### Update TSV for togovar-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/togovar-refseq_rna.tsv is newer than config/togovar-refseq_rna/config.yaml # File output/tsv/togovar-refseq_rna.tsv has no timestamp file -# File output/tsv/togovar-refseq_rna.tsv is created 13.125369722816773 days ago (will be updated when >5 days) -## Update config/togovar-refseq_rna/config.yaml => output/tsv/togovar-refseq_rna.tsv -< 2023-11-27T13:59:59 togovar-refseq_rna -togoid-config config/togovar-refseq_rna update -# Success: output/tsv/togovar-refseq_rna.tsv is updated -> 2023-11-27T14:01:27 togovar-refseq_rna -### Update TSV for uberon-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/togovar-refseq_rna.tsv is created 4.536752631615602 days ago (will be updated when >5 days) +# => Preserving output/tsv/togovar-refseq_rna.tsv +### Update TSV for uberon-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/uberon-ncit_tissue.tsv is newer than config/uberon-ncit_tissue/config.yaml # File output/tsv/uberon-ncit_tissue.tsv has no timestamp file -# File output/tsv/uberon-ncit_tissue.tsv is created 9.420897621281933 days ago (will be updated when >5 days) -## Update config/uberon-ncit_tissue/config.yaml => output/tsv/uberon-ncit_tissue.tsv -< 2023-11-27T14:01:27 uberon-ncit_tissue -togoid-config config/uberon-ncit_tissue update -# Success: output/tsv/uberon-ncit_tissue.tsv is updated -> 2023-11-27T14:01:29 uberon-ncit_tissue +# File output/tsv/uberon-ncit_tissue.tsv is created 4.536723968260208 days ago (will be updated when >5 days) +# => Preserving output/tsv/uberon-ncit_tissue.tsv ### Update TSV for uniprot-chembl_target if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/uniprot-chembl_target.tsv is newer than config/uniprot-chembl_target/config.yaml # File output/tsv/uniprot-chembl_target.tsv is newer than input/uniprot/download.lock @@ -3010,146 +1898,62 @@ togoid-config config/uberon-ncit_tissue update # File output/tsv/uniprot-uniprot_mnemonic.tsv is newer than config/uniprot-uniprot_mnemonic/config.yaml # File output/tsv/uniprot-uniprot_mnemonic.tsv is newer than input/uniprot/download.lock # => Preserving output/tsv/uniprot-uniprot_mnemonic.tsv -### Update TSV for uniprot_reference_proteome-assembly_insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +### Update TSV for uniprot_reference_proteome-assembly_insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is newer than config/uniprot_reference_proteome-assembly_insdc/config.yaml # File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv has no timestamp file -# File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is created 9.420920718348704 days ago (will be updated when >5 days) -## Update config/uniprot_reference_proteome-assembly_insdc/config.yaml => output/tsv/uniprot_reference_proteome-assembly_insdc.tsv -< 2023-11-27T14:01:29 uniprot_reference_proteome-assembly_insdc -togoid-config config/uniprot_reference_proteome-assembly_insdc update -# Success: output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is updated -> 2023-11-27T14:01:30 uniprot_reference_proteome-assembly_insdc -### Update TSV for uniprot_reference_proteome-assembly_refseq if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is created 4.5367147321543175 days ago (will be updated when >5 days) +# => Preserving output/tsv/uniprot_reference_proteome-assembly_insdc.tsv +### Update TSV for uniprot_reference_proteome-assembly_refseq if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is newer than config/uniprot_reference_proteome-assembly_refseq/config.yaml # File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv has no timestamp file -# File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is created 9.420923384931575 days ago (will be updated when >5 days) -## Update config/uniprot_reference_proteome-assembly_refseq/config.yaml => output/tsv/uniprot_reference_proteome-assembly_refseq.tsv -< 2023-11-27T14:01:30 uniprot_reference_proteome-assembly_refseq -togoid-config config/uniprot_reference_proteome-assembly_refseq update -# Success: output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is updated -> 2023-11-27T14:01:31 uniprot_reference_proteome-assembly_refseq -### Update TSV for uniprot_reference_proteome-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is created 4.536709483434537 days ago (will be updated when >5 days) +# => Preserving output/tsv/uniprot_reference_proteome-assembly_refseq.tsv +### Update TSV for uniprot_reference_proteome-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/uniprot_reference_proteome-taxonomy.tsv is newer than config/uniprot_reference_proteome-taxonomy/config.yaml # File output/tsv/uniprot_reference_proteome-taxonomy.tsv has no timestamp file -# File output/tsv/uniprot_reference_proteome-taxonomy.tsv is created 9.420922986559514 days ago (will be updated when >5 days) -## Update config/uniprot_reference_proteome-taxonomy/config.yaml => output/tsv/uniprot_reference_proteome-taxonomy.tsv -< 2023-11-27T14:01:31 uniprot_reference_proteome-taxonomy -togoid-config config/uniprot_reference_proteome-taxonomy update -# Success: output/tsv/uniprot_reference_proteome-taxonomy.tsv is updated -> 2023-11-27T14:01:31 uniprot_reference_proteome-taxonomy -### Update TSV for wikipathways-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/uniprot_reference_proteome-taxonomy.tsv is created 4.536704037836505 days ago (will be updated when >5 days) +# => Preserving output/tsv/uniprot_reference_proteome-taxonomy.tsv +### Update TSV for wikipathways-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/wikipathways-chebi.tsv is newer than config/wikipathways-chebi/config.yaml # File output/tsv/wikipathways-chebi.tsv has no timestamp file -# File output/tsv/wikipathways-chebi.tsv is created 9.420895816357072 days ago (will be updated when >5 days) -## Update config/wikipathways-chebi/config.yaml => output/tsv/wikipathways-chebi.tsv -< 2023-11-27T14:01:31 wikipathways-chebi -togoid-config config/wikipathways-chebi update -# Success: output/tsv/wikipathways-chebi.tsv is updated -> 2023-11-27T14:01:34 wikipathways-chebi -### Update TSV for wikipathways-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/wikipathways-chebi.tsv is created 4.536669564297211 days ago (will be updated when >5 days) +# => Preserving output/tsv/wikipathways-chebi.tsv +### Update TSV for wikipathways-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/wikipathways-doid.tsv is newer than config/wikipathways-doid/config.yaml # File output/tsv/wikipathways-doid.tsv has no timestamp file -# File output/tsv/wikipathways-doid.tsv is created 9.42090757334581 days ago (will be updated when >5 days) -## Update config/wikipathways-doid/config.yaml => output/tsv/wikipathways-doid.tsv -< 2023-11-27T14:01:34 wikipathways-doid -togoid-config config/wikipathways-doid update -# Success: output/tsv/wikipathways-doid.tsv is updated -> 2023-11-27T14:01:36 wikipathways-doid -### Update TSV for wikipathways-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/wikipathways-doid.tsv is created 4.53664835466022 days ago (will be updated when >5 days) +# => Preserving output/tsv/wikipathways-doid.tsv +### Update TSV for wikipathways-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/wikipathways-hmdb.tsv is newer than config/wikipathways-hmdb/config.yaml # File output/tsv/wikipathways-hmdb.tsv has no timestamp file -# File output/tsv/wikipathways-hmdb.tsv is created 9.420903098770081 days ago (will be updated when >5 days) -## Update config/wikipathways-hmdb/config.yaml => output/tsv/wikipathways-hmdb.tsv -< 2023-11-27T14:01:36 wikipathways-hmdb -togoid-config config/wikipathways-hmdb update -# Success: output/tsv/wikipathways-hmdb.tsv is updated -> 2023-11-27T14:01:38 wikipathways-hmdb -### Update TSV for wikipathways-lipidmaps if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/wikipathways-hmdb.tsv is created 4.536621607697257 days ago (will be updated when >5 days) +# => Preserving output/tsv/wikipathways-hmdb.tsv +### Update TSV for wikipathways-lipidmaps if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/wikipathways-lipidmaps.tsv is newer than config/wikipathways-lipidmaps/config.yaml # File output/tsv/wikipathways-lipidmaps.tsv has no timestamp file -# File output/tsv/wikipathways-lipidmaps.tsv is created 9.4209088220306 days ago (will be updated when >5 days) -## Update config/wikipathways-lipidmaps/config.yaml => output/tsv/wikipathways-lipidmaps.tsv -< 2023-11-27T14:01:38 wikipathways-lipidmaps -togoid-config config/wikipathways-lipidmaps update -# Success: output/tsv/wikipathways-lipidmaps.tsv is updated -> 2023-11-27T14:01:40 wikipathways-lipidmaps -### Update TSV for wikipathways-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/wikipathways-lipidmaps.tsv is created 4.536599740962037 days ago (will be updated when >5 days) +# => Preserving output/tsv/wikipathways-lipidmaps.tsv +### Update TSV for wikipathways-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/wikipathways-ncbigene.tsv is newer than config/wikipathways-ncbigene/config.yaml # File output/tsv/wikipathways-ncbigene.tsv has no timestamp file -# File output/tsv/wikipathways-ncbigene.tsv is created 9.420878910286492 days ago (will be updated when >5 days) -## Update config/wikipathways-ncbigene/config.yaml => output/tsv/wikipathways-ncbigene.tsv -< 2023-11-27T14:01:40 wikipathways-ncbigene -togoid-config config/wikipathways-ncbigene update -# Success: output/tsv/wikipathways-ncbigene.tsv is updated -> 2023-11-27T14:01:45 wikipathways-ncbigene -### Update TSV for wikipathways-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true +# File output/tsv/wikipathways-ncbigene.tsv is created 4.536547343074143 days ago (will be updated when >5 days) +# => Preserving output/tsv/wikipathways-ncbigene.tsv +### Update TSV for wikipathways-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false # File output/tsv/wikipathways-uniprot.tsv is newer than config/wikipathways-uniprot/config.yaml # File output/tsv/wikipathways-uniprot.tsv has no timestamp file -# File output/tsv/wikipathways-uniprot.tsv is created 9.420875814787639 days ago (will be updated when >5 days) -## Update config/wikipathways-uniprot/config.yaml => output/tsv/wikipathways-uniprot.tsv -< 2023-11-27T14:01:45 wikipathways-uniprot -togoid-config config/wikipathways-uniprot update -# Success: output/tsv/wikipathways-uniprot.tsv is updated -> 2023-11-27T14:01:49 wikipathways-uniprot -Rule for TSV (output/tsv/affy_probeset-ncbigene.tsv) ------------------------------- -Investigating output/tsv/affy_probeset-ncbigene.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 00:12:45 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TSV (output/tsv/assembly_insdc-bioproject.tsv) ------------------------------- -Investigating output/tsv/assembly_insdc-bioproject.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 00:12:49 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TSV (output/tsv/assembly_insdc-biosample.tsv) ------------------------------- -Investigating output/tsv/assembly_insdc-biosample.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 00:12:51 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TSV (output/tsv/assembly_insdc-insdc_master.tsv) ------------------------------- -Investigating output/tsv/assembly_insdc-insdc_master.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 00:12:53 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - +# File output/tsv/wikipathways-uniprot.tsv is created 4.536494918378542 days ago (will be updated when >5 days) +# => Preserving output/tsv/wikipathways-uniprot.tsv Rule for TSV (output/tsv/bioproject-biosample.tsv) ------------------------------ Investigating output/tsv/bioproject-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:12:55 +0900 +timestamp: 2023-12-01 17:49:03 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:bioproject (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:bioproject (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/bioproject-geo_series.tsv) @@ -3157,12 +1961,12 @@ Rule for TSV (output/tsv/bioproject-geo_series.tsv) Investigating output/tsv/bioproject-geo_series.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 10:51:37 +0900 +timestamp: 2023-12-01 17:49:05 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:bioproject (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:bioproject (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/bioproject-pubmed.tsv) @@ -3170,12 +1974,12 @@ Rule for TSV (output/tsv/bioproject-pubmed.tsv) Investigating output/tsv/bioproject-pubmed.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 10:51:38 +0900 +timestamp: 2023-12-01 17:49:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:bioproject (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:bioproject (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/bioproject_umbrella-bioproject.tsv) @@ -3183,24 +1987,12 @@ Rule for TSV (output/tsv/bioproject_umbrella-bioproject.tsv) Investigating output/tsv/bioproject_umbrella-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:12:59 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:bioproject (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/biosample-bioproject.tsv) ------------------------------- -Investigating output/tsv/biosample-bioproject.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 00:13:02 +0900 +timestamp: 2023-12-01 17:49:07 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:bioproject (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/cellosaurus-ncit_disease.tsv) @@ -3212,8 +2004,8 @@ timestamp: 2023-10-06 17:40:53 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:cellosaurus (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:cellosaurus (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/cellosaurus-orphanet_phenotype.tsv) @@ -3225,8 +2017,8 @@ timestamp: 2023-10-06 17:40:56 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:cellosaurus (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:cellosaurus (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/chembl_target-ensembl_gene.tsv) @@ -3250,8 +2042,8 @@ timestamp: 2023-07-28 17:55:29 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:cog (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:cog (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/cog-refseq_protein.tsv) @@ -3263,8 +2055,8 @@ timestamp: 2023-07-28 17:55:40 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:cog (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:cog (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-affy_probeset.tsv) @@ -3272,12 +2064,12 @@ Rule for TSV (output/tsv/ensembl_gene-affy_probeset.tsv) Investigating output/tsv/ensembl_gene-affy_probeset.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-24 18:42:51 +0900 +timestamp: 2023-12-01 18:06:48 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-ensembl_protein.tsv) @@ -3285,12 +2077,12 @@ Rule for TSV (output/tsv/ensembl_gene-ensembl_protein.tsv) Investigating output/tsv/ensembl_gene-ensembl_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-24 18:54:52 +0900 +timestamp: 2023-12-01 18:08:35 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-ensembl_transcript.tsv) @@ -3298,12 +2090,12 @@ Rule for TSV (output/tsv/ensembl_gene-ensembl_transcript.tsv) Investigating output/tsv/ensembl_gene-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-24 19:06:59 +0900 +timestamp: 2023-12-01 18:10:35 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-hgnc.tsv) @@ -3311,12 +2103,12 @@ Rule for TSV (output/tsv/ensembl_gene-hgnc.tsv) Investigating output/tsv/ensembl_gene-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-24 19:07:01 +0900 +timestamp: 2023-12-01 18:10:36 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-ncbigene.tsv) @@ -3324,12 +2116,12 @@ Rule for TSV (output/tsv/ensembl_gene-ncbigene.tsv) Investigating output/tsv/ensembl_gene-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-24 19:12:22 +0900 +timestamp: 2023-12-01 18:11:57 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_gene-uniprot.tsv) @@ -3337,12 +2129,12 @@ Rule for TSV (output/tsv/ensembl_gene-uniprot.tsv) Investigating output/tsv/ensembl_gene-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-24 19:23:49 +0900 +timestamp: 2023-12-01 18:14:25 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_protein-ensembl_transcript.tsv) @@ -3350,12 +2142,12 @@ Rule for TSV (output/tsv/ensembl_protein-ensembl_transcript.tsv) Investigating output/tsv/ensembl_protein-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:39:42 +0900 +timestamp: 2023-12-01 18:26:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-affy_probeset.tsv) @@ -3363,12 +2155,12 @@ Rule for TSV (output/tsv/ensembl_transcript-affy_probeset.tsv) Investigating output/tsv/ensembl_transcript-affy_probeset.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:43:12 +0900 +timestamp: 2023-12-01 18:27:45 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-go.tsv) @@ -3376,12 +2168,12 @@ Rule for TSV (output/tsv/ensembl_transcript-go.tsv) Investigating output/tsv/ensembl_transcript-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-24 21:14:09 +0900 +timestamp: 2023-12-02 01:51:21 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-hgnc.tsv) @@ -3389,12 +2181,12 @@ Rule for TSV (output/tsv/ensembl_transcript-hgnc.tsv) Investigating output/tsv/ensembl_transcript-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:47:04 +0900 +timestamp: 2023-12-02 01:51:27 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ Rule for TSV (output/tsv/ensembl_transcript-refseq_rna.tsv) @@ -3402,5112 +2194,3610 @@ Rule for TSV (output/tsv/ensembl_transcript-refseq_rna.tsv) Investigating output/tsv/ensembl_transcript-refseq_rna.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:35 +0900 +timestamp: 2023-12-02 02:05:36 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ensembl (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ensembl (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/gea-bioproject.tsv) +Rule for TSV (output/tsv/hmdb-chebi.tsv) ------------------------------ -Investigating output/tsv/gea-bioproject.tsv +Investigating output/tsv/hmdb-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:35 +0900 +timestamp: 2023-07-03 13:03:28 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:hmdb (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/gea-biosample.tsv) +Rule for TSV (output/tsv/hmdb-inchi_key.tsv) ------------------------------ -Investigating output/tsv/gea-biosample.tsv +Investigating output/tsv/hmdb-inchi_key.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:36 +0900 +timestamp: 2023-07-03 13:03:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:hmdb (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-ccds.tsv) +Rule for TSV (output/tsv/hmdb-pdb_ccd.tsv) ------------------------------ -Investigating output/tsv/hgnc-ccds.tsv +Investigating output/tsv/hmdb-pdb_ccd.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:45 +0900 +timestamp: 2023-07-03 13:06:37 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:hmdb (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-ec.tsv) +Rule for TSV (output/tsv/hmdb-pubchem_compound.tsv) ------------------------------ -Investigating output/tsv/hgnc-ec.tsv +Investigating output/tsv/hmdb-pubchem_compound.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:45 +0900 +timestamp: 2023-07-03 13:06:27 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:hmdb (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-ensembl_gene.tsv) +Rule for TSV (output/tsv/homologene-ncbigene.tsv) ------------------------------ -Investigating output/tsv/hgnc-ensembl_gene.tsv +Investigating output/tsv/homologene-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:46 +0900 +timestamp: 2023-06-02 19:58:16 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:homologene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-hgnc_symbol.tsv) +Rule for TSV (output/tsv/hp_phenotype-omim_phenotype.tsv) ------------------------------ -Investigating output/tsv/hgnc-hgnc_symbol.tsv +Investigating output/tsv/hp_phenotype-omim_phenotype.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:46 +0900 +timestamp: 2023-10-16 09:24:24 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:hp_phenotype (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-insdc.tsv) +Rule for TSV (output/tsv/hp_phenotype-orphanet_phenotype.tsv) ------------------------------ -Investigating output/tsv/hgnc-insdc.tsv +Investigating output/tsv/hp_phenotype-orphanet_phenotype.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:47 +0900 +timestamp: 2023-10-13 18:16:38 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:hp_phenotype (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-lrg.tsv) +Rule for TSV (output/tsv/interpro-go.tsv) ------------------------------ -Investigating output/tsv/hgnc-lrg.tsv +Investigating output/tsv/interpro-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:47 +0900 +timestamp: 2023-11-12 10:20:00 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-mgi_gene.tsv) +Rule for TSV (output/tsv/interpro-pdb.tsv) ------------------------------ -Investigating output/tsv/hgnc-mgi_gene.tsv +Investigating output/tsv/interpro-pdb.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:48 +0900 +timestamp: 2023-11-12 10:20:03 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-mirbase.tsv) +Rule for TSV (output/tsv/interpro-pfam.tsv) ------------------------------ -Investigating output/tsv/hgnc-mirbase.tsv +Investigating output/tsv/interpro-pfam.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:48 +0900 +timestamp: 2023-11-12 10:20:04 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-ncbigene.tsv) +Rule for TSV (output/tsv/interpro-prosite.tsv) ------------------------------ -Investigating output/tsv/hgnc-ncbigene.tsv +Investigating output/tsv/interpro-prosite.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:49 +0900 +timestamp: 2023-11-12 10:20:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-omim_gene.tsv) +Rule for TSV (output/tsv/interpro-pubmed.tsv) ------------------------------ -Investigating output/tsv/hgnc-omim_gene.tsv +Investigating output/tsv/interpro-pubmed.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:49 +0900 +timestamp: 2023-11-12 10:20:08 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-pubmed.tsv) +Rule for TSV (output/tsv/interpro-reactome_pathway.tsv) ------------------------------ -Investigating output/tsv/hgnc-pubmed.tsv +Investigating output/tsv/interpro-reactome_pathway.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:50 +0900 +timestamp: 2023-11-12 10:20:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-refseq_rna.tsv) +Rule for TSV (output/tsv/interpro-smart.tsv) ------------------------------ -Investigating output/tsv/hgnc-refseq_rna.tsv +Investigating output/tsv/interpro-smart.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:50 +0900 +timestamp: 2023-11-12 10:20:11 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-rgd.tsv) +Rule for TSV (output/tsv/interpro-uniprot.tsv) ------------------------------ -Investigating output/tsv/hgnc-rgd.tsv +Investigating output/tsv/interpro-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:51 +0900 +timestamp: 2023-11-12 14:10:18 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:interpro (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hgnc-uniprot.tsv) +Rule for TSV (output/tsv/mgi_gene-ensembl_gene.tsv) ------------------------------ -Investigating output/tsv/hgnc-uniprot.tsv +Investigating output/tsv/mgi_gene-ensembl_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:51 +0900 +timestamp: 2023-12-02 02:07:46 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:mgi_gene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hmdb-chebi.tsv) +Rule for TSV (output/tsv/mgi_gene-hgnc.tsv) ------------------------------ -Investigating output/tsv/hmdb-chebi.tsv +Investigating output/tsv/mgi_gene-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-07-03 13:03:28 +0900 +timestamp: 2023-12-02 02:07:46 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:hmdb (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:mgi_gene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hmdb-inchi_key.tsv) +Rule for TSV (output/tsv/mgi_gene-mgi_allele.tsv) ------------------------------ -Investigating output/tsv/hmdb-inchi_key.tsv +Investigating output/tsv/mgi_gene-mgi_allele.tsv class: Rake::FileTask task needed: true -timestamp: 2023-07-03 13:03:51 +0900 +timestamp: 2023-12-02 02:07:48 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:hmdb (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:mgi_gene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hmdb-pdb_ccd.tsv) +Rule for TSV (output/tsv/mgi_gene-ncbigene.tsv) ------------------------------ -Investigating output/tsv/hmdb-pdb_ccd.tsv +Investigating output/tsv/mgi_gene-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-07-03 13:06:37 +0900 +timestamp: 2023-12-02 02:07:48 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:hmdb (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:mgi_gene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hmdb-pubchem_compound.tsv) +Rule for TSV (output/tsv/mgi_gene-uniprot.tsv) ------------------------------ -Investigating output/tsv/hmdb-pubchem_compound.tsv +Investigating output/tsv/mgi_gene-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-07-03 13:06:27 +0900 +timestamp: 2023-12-02 02:07:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:hmdb (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:mgi_gene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/homologene-ncbigene.tsv) +Rule for TSV (output/tsv/mgi_genotype-doid.tsv) ------------------------------ -Investigating output/tsv/homologene-ncbigene.tsv +Investigating output/tsv/mgi_genotype-doid.tsv class: Rake::FileTask task needed: true -timestamp: 2023-06-02 19:58:16 +0900 +timestamp: 2023-12-02 02:07:50 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:homologene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:mgi_genotype (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hp_inheritance-omim_phenotype.tsv) +Rule for TSV (output/tsv/mgi_genotype-mgi_allele.tsv) ------------------------------ -Investigating output/tsv/hp_inheritance-omim_phenotype.tsv +Investigating output/tsv/mgi_genotype-mgi_allele.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:48:52 +0900 +timestamp: 2023-12-02 02:07:52 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:mgi_genotype (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hp_phenotype-omim_phenotype.tsv) +Rule for TSV (output/tsv/mgi_genotype-mp.tsv) ------------------------------ -Investigating output/tsv/hp_phenotype-omim_phenotype.tsv +Investigating output/tsv/mgi_genotype-mp.tsv class: Rake::FileTask task needed: true -timestamp: 2023-10-16 09:24:24 +0900 +timestamp: 2023-12-02 02:07:54 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:hp_phenotype (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:mgi_genotype (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/hp_phenotype-orphanet_phenotype.tsv) +Rule for TSV (output/tsv/ncbigene-ensembl_gene.tsv) ------------------------------ -Investigating output/tsv/hp_phenotype-orphanet_phenotype.tsv +Investigating output/tsv/ncbigene-ensembl_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-10-13 18:16:38 +0900 +timestamp: 2023-12-02 02:08:30 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:hp_phenotype (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/insdc-bioproject.tsv) +Rule for TSV (output/tsv/ncbigene-ensembl_protein.tsv) ------------------------------ -Investigating output/tsv/insdc-bioproject.tsv +Investigating output/tsv/ncbigene-ensembl_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:49:15 +0900 +timestamp: 2023-12-02 02:09:28 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/insdc-biosample.tsv) +Rule for TSV (output/tsv/ncbigene-ensembl_transcript.tsv) ------------------------------ -Investigating output/tsv/insdc-biosample.tsv +Investigating output/tsv/ncbigene-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:50:34 +0900 +timestamp: 2023-12-02 02:10:25 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/insdc_master-bioproject.tsv) +Rule for TSV (output/tsv/ncbigene-flybase_gene.tsv) ------------------------------ -Investigating output/tsv/insdc_master-bioproject.tsv +Investigating output/tsv/ncbigene-flybase_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:50:35 +0900 +timestamp: 2023-12-02 02:11:33 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/insdc_master-biosample.tsv) +Rule for TSV (output/tsv/ncbigene-go.tsv) ------------------------------ -Investigating output/tsv/insdc_master-biosample.tsv +Investigating output/tsv/ncbigene-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:50:37 +0900 +timestamp: 2023-12-02 02:13:54 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-go.tsv) +Rule for TSV (output/tsv/ncbigene-hgnc.tsv) ------------------------------ -Investigating output/tsv/interpro-go.tsv +Investigating output/tsv/ncbigene-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 10:20:00 +0900 +timestamp: 2023-12-02 02:13:55 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-pdb.tsv) +Rule for TSV (output/tsv/ncbigene-mgi_gene.tsv) ------------------------------ -Investigating output/tsv/interpro-pdb.tsv +Investigating output/tsv/ncbigene-mgi_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 10:20:03 +0900 +timestamp: 2023-12-02 02:14:52 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-pfam.tsv) +Rule for TSV (output/tsv/ncbigene-mirbase.tsv) ------------------------------ -Investigating output/tsv/interpro-pfam.tsv +Investigating output/tsv/ncbigene-mirbase.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 10:20:04 +0900 +timestamp: 2023-12-02 02:16:23 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-prosite.tsv) +Rule for TSV (output/tsv/ncbigene-omim_gene.tsv) ------------------------------ -Investigating output/tsv/interpro-prosite.tsv +Investigating output/tsv/ncbigene-omim_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 10:20:06 +0900 +timestamp: 2023-12-02 02:16:24 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-pubmed.tsv) +Rule for TSV (output/tsv/ncbigene-refseq_genomic.tsv) ------------------------------ -Investigating output/tsv/interpro-pubmed.tsv +Investigating output/tsv/ncbigene-refseq_genomic.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 10:20:08 +0900 +timestamp: 2023-12-02 02:20:14 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-reactome_pathway.tsv) +Rule for TSV (output/tsv/ncbigene-refseq_protein.tsv) ------------------------------ -Investigating output/tsv/interpro-reactome_pathway.tsv +Investigating output/tsv/ncbigene-refseq_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 10:20:10 +0900 +timestamp: 2023-12-02 02:25:08 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-smart.tsv) +Rule for TSV (output/tsv/ncbigene-refseq_rna.tsv) ------------------------------ -Investigating output/tsv/interpro-smart.tsv +Investigating output/tsv/ncbigene-refseq_rna.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 10:20:11 +0900 +timestamp: 2023-12-02 02:29:14 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/interpro-uniprot.tsv) +Rule for TSV (output/tsv/ncbigene-rgd.tsv) ------------------------------ -Investigating output/tsv/interpro-uniprot.tsv +Investigating output/tsv/ncbigene-rgd.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 14:10:18 +0900 +timestamp: 2023-12-02 02:30:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:interpro (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/jga_study-jga_dataset.tsv) +Rule for TSV (output/tsv/ncbigene-sgd.tsv) ------------------------------ -Investigating output/tsv/jga_study-jga_dataset.tsv +Investigating output/tsv/ncbigene-sgd.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:50:37 +0900 +timestamp: 2023-12-02 02:31:15 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/jga_study-nbdc_human_db.tsv) +Rule for TSV (output/tsv/ncbigene-tair.tsv) ------------------------------ -Investigating output/tsv/jga_study-nbdc_human_db.tsv +Investigating output/tsv/ncbigene-tair.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:50:38 +0900 +timestamp: 2023-12-02 02:32:20 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/jga_study-pubmed.tsv) +Rule for TSV (output/tsv/ncbigene-taxonomy.tsv) ------------------------------ -Investigating output/tsv/jga_study-pubmed.tsv +Investigating output/tsv/ncbigene-taxonomy.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 00:50:38 +0900 +timestamp: 2023-12-02 02:33:00 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/medgen-hp_phenotype.tsv) +Rule for TSV (output/tsv/ncbigene-vgnc.tsv) ------------------------------ -Investigating output/tsv/medgen-hp_phenotype.tsv +Investigating output/tsv/ncbigene-vgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:30:50 +0900 +timestamp: 2023-12-02 02:34:05 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/medgen-mesh.tsv) +Rule for TSV (output/tsv/ncbigene-wormbase_gene.tsv) ------------------------------ -Investigating output/tsv/medgen-mesh.tsv +Investigating output/tsv/ncbigene-wormbase_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:30:51 +0900 +timestamp: 2023-12-02 02:35:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/medgen-mondo.tsv) +Rule for TSV (output/tsv/ncbigene-xenbase_gene.tsv) ------------------------------ -Investigating output/tsv/medgen-mondo.tsv +Investigating output/tsv/ncbigene-xenbase_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:30:51 +0900 +timestamp: 2023-12-02 02:36:14 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/medgen-ncbigene.tsv) +Rule for TSV (output/tsv/ncbigene-zfin_gene.tsv) ------------------------------ -Investigating output/tsv/medgen-ncbigene.tsv +Investigating output/tsv/ncbigene-zfin_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:30:52 +0900 +timestamp: 2023-12-02 02:37:19 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:ncbigene (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/medgen-omim_phenotype.tsv) +Rule for TSV (output/tsv/oma_protein-ensembl_gene.tsv) ------------------------------ -Investigating output/tsv/medgen-omim_phenotype.tsv +Investigating output/tsv/oma_protein-ensembl_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:30:52 +0900 +timestamp: 2023-10-13 19:34:15 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:oma_protein (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/medgen-orphanet_phenotype.tsv) +Rule for TSV (output/tsv/oma_protein-ensembl_transcript.tsv) ------------------------------ -Investigating output/tsv/medgen-orphanet_phenotype.tsv +Investigating output/tsv/oma_protein-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:30:53 +0900 +timestamp: 2023-10-13 19:43:07 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:oma_protein (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mgi_gene-ensembl_gene.tsv) +Rule for TSV (output/tsv/oma_protein-ncbigene.tsv) ------------------------------ -Investigating output/tsv/mgi_gene-ensembl_gene.tsv +Investigating output/tsv/oma_protein-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:57:58 +0900 +timestamp: 2023-10-20 20:12:58 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_gene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:oma_protein (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mgi_gene-hgnc.tsv) +Rule for TSV (output/tsv/oma_protein-uniprot.tsv) ------------------------------ -Investigating output/tsv/mgi_gene-hgnc.tsv +Investigating output/tsv/oma_protein-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:57:59 +0900 +timestamp: 2023-10-13 19:43:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_gene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:oma_protein (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mgi_gene-mgi_allele.tsv) +Rule for TSV (output/tsv/prosite-prosite_prorule.tsv) ------------------------------ -Investigating output/tsv/mgi_gene-mgi_allele.tsv +Investigating output/tsv/prosite-prosite_prorule.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:58:00 +0900 +timestamp: 2023-11-18 02:00:53 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_gene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:prosite (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mgi_gene-ncbigene.tsv) +Rule for TSV (output/tsv/pubchem_compound-atc.tsv) ------------------------------ -Investigating output/tsv/mgi_gene-ncbigene.tsv +Investigating output/tsv/pubchem_compound-atc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:58:00 +0900 +timestamp: 2023-08-11 19:32:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_gene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TSV (output/tsv/mgi_gene-uniprot.tsv) +Rule for TSV (output/tsv/reactome_pathway-chebi.tsv) ------------------------------ -Investigating output/tsv/mgi_gene-uniprot.tsv +Investigating output/tsv/reactome_pathway-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:58:01 +0900 +timestamp: 2023-11-27 12:45:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_gene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mgi_genotype-doid.tsv) +Rule for TSV (output/tsv/reactome_pathway-go.tsv) ------------------------------ -Investigating output/tsv/mgi_genotype-doid.tsv +Investigating output/tsv/reactome_pathway-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:58:02 +0900 +timestamp: 2023-12-02 02:46:41 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_genotype (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mgi_genotype-mgi_allele.tsv) +Rule for TSV (output/tsv/reactome_pathway-iuphar_ligand.tsv) ------------------------------ -Investigating output/tsv/mgi_genotype-mgi_allele.tsv +Investigating output/tsv/reactome_pathway-iuphar_ligand.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:58:04 +0900 +timestamp: 2023-11-27 12:45:07 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_genotype (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mgi_genotype-mp.tsv) +Rule for TSV (output/tsv/reactome_pathway-mirbase.tsv) ------------------------------ -Investigating output/tsv/mgi_genotype-mp.tsv +Investigating output/tsv/reactome_pathway-mirbase.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:58:06 +0900 +timestamp: 2023-11-27 12:45:07 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:mgi_genotype (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mondo-doid.tsv) +Rule for TSV (output/tsv/reactome_pathway-reactome_reaction.tsv) ------------------------------ -Investigating output/tsv/mondo-doid.tsv +Investigating output/tsv/reactome_pathway-reactome_reaction.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:31:02 +0900 +timestamp: 2023-12-02 02:46:46 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mondo-hp_phenotype.tsv) +Rule for TSV (output/tsv/reactome_pathway-uniprot.tsv) ------------------------------ -Investigating output/tsv/mondo-hp_phenotype.tsv +Investigating output/tsv/reactome_pathway-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:31:03 +0900 +timestamp: 2023-11-27 12:45:09 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mondo-meddra.tsv) +Rule for TSV (output/tsv/reactome_reaction-chebi.tsv) ------------------------------ -Investigating output/tsv/mondo-meddra.tsv +Investigating output/tsv/reactome_reaction-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:31:03 +0900 +timestamp: 2023-11-27 12:45:09 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mondo-mesh.tsv) +Rule for TSV (output/tsv/reactome_reaction-go.tsv) ------------------------------ -Investigating output/tsv/mondo-mesh.tsv +Investigating output/tsv/reactome_reaction-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:31:04 +0900 +timestamp: 2023-12-02 02:46:47 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mondo-omim_phenotype.tsv) +Rule for TSV (output/tsv/reactome_reaction-iuphar_ligand.tsv) ------------------------------ -Investigating output/tsv/mondo-omim_phenotype.tsv +Investigating output/tsv/reactome_reaction-iuphar_ligand.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:31:04 +0900 +timestamp: 2023-11-27 12:45:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/mondo-orphanet_phenotype.tsv) +Rule for TSV (output/tsv/reactome_reaction-mirbase.tsv) ------------------------------ -Investigating output/tsv/mondo-orphanet_phenotype.tsv +Investigating output/tsv/reactome_reaction-mirbase.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:31:04 +0900 +timestamp: 2023-11-27 12:45:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/nando-mondo.tsv) +Rule for TSV (output/tsv/reactome_reaction-uniprot.tsv) ------------------------------ -Investigating output/tsv/nando-mondo.tsv +Investigating output/tsv/reactome_reaction-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 01:31:05 +0900 +timestamp: 2023-11-27 12:45:11 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:reactome (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-ensembl_gene.tsv) +Rule for TSV (output/tsv/refseq_protein-uniprot.tsv) ------------------------------ -Investigating output/tsv/ncbigene-ensembl_gene.tsv +Investigating output/tsv/refseq_protein-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:58:37 +0900 +timestamp: 2023-12-02 02:53:15 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_protein (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-ensembl_protein.tsv) +Rule for TSV (output/tsv/refseq_rna-dbsnp.tsv) ------------------------------ -Investigating output/tsv/ncbigene-ensembl_protein.tsv +Investigating output/tsv/refseq_rna-dbsnp.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 11:59:36 +0900 +timestamp: 2023-11-18 02:36:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_rna (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-ensembl_transcript.tsv) +Rule for TSV (output/tsv/refseq_rna-hgnc.tsv) ------------------------------ -Investigating output/tsv/ncbigene-ensembl_transcript.tsv +Investigating output/tsv/refseq_rna-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:00:29 +0900 +timestamp: 2023-11-18 02:37:34 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_rna (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-flybase_gene.tsv) +Rule for TSV (output/tsv/refseq_rna-ncbigene.tsv) ------------------------------ -Investigating output/tsv/ncbigene-flybase_gene.tsv +Investigating output/tsv/refseq_rna-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:01:39 +0900 +timestamp: 2023-11-18 02:40:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_rna (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-go.tsv) +Rule for TSV (output/tsv/refseq_rna-omim_gene.tsv) ------------------------------ -Investigating output/tsv/ncbigene-go.tsv +Investigating output/tsv/refseq_rna-omim_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:03:57 +0900 +timestamp: 2023-11-18 02:42:06 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_rna (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-hgnc.tsv) +Rule for TSV (output/tsv/refseq_rna-pubmed.tsv) ------------------------------ -Investigating output/tsv/ncbigene-hgnc.tsv +Investigating output/tsv/refseq_rna-pubmed.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:03:58 +0900 +timestamp: 2023-11-18 02:43:55 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_rna (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-mgi_gene.tsv) +Rule for TSV (output/tsv/refseq_rna-refseq_protein.tsv) ------------------------------ -Investigating output/tsv/ncbigene-mgi_gene.tsv +Investigating output/tsv/refseq_rna-refseq_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:04:54 +0900 +timestamp: 2023-11-18 02:47:16 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_rna (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-mirbase.tsv) +Rule for TSV (output/tsv/refseq_rna-taxonomy.tsv) ------------------------------ -Investigating output/tsv/ncbigene-mirbase.tsv +Investigating output/tsv/refseq_rna-taxonomy.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:06:26 +0900 +timestamp: 2023-11-18 02:50:10 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:refseq_rna (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-omim_gene.tsv) +Rule for TSV (output/tsv/rhea-chebi.tsv) ------------------------------ -Investigating output/tsv/ncbigene-omim_gene.tsv +Investigating output/tsv/rhea-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:06:27 +0900 +timestamp: 2023-11-12 15:31:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:rhea (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-refseq_genomic.tsv) +Rule for TSV (output/tsv/rhea-ec.tsv) ------------------------------ -Investigating output/tsv/ncbigene-refseq_genomic.tsv +Investigating output/tsv/rhea-ec.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:22:04 +0900 +timestamp: 2023-11-12 15:31:42 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:rhea (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-refseq_protein.tsv) +Rule for TSV (output/tsv/rhea-go.tsv) ------------------------------ -Investigating output/tsv/ncbigene-refseq_protein.tsv +Investigating output/tsv/rhea-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:26:19 +0900 +timestamp: 2023-11-12 15:31:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:rhea (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-refseq_rna.tsv) +Rule for TSV (output/tsv/rhea-pubmed.tsv) ------------------------------ -Investigating output/tsv/ncbigene-refseq_rna.tsv +Investigating output/tsv/rhea-pubmed.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:29:54 +0900 +timestamp: 2023-11-12 15:31:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:rhea (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-rgd.tsv) +Rule for TSV (output/tsv/rhea-reactome_reaction.tsv) ------------------------------ -Investigating output/tsv/ncbigene-rgd.tsv +Investigating output/tsv/rhea-reactome_reaction.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:30:49 +0900 +timestamp: 2023-11-12 15:31:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:rhea (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-sgd.tsv) +Rule for TSV (output/tsv/rhea-uniprot.tsv) ------------------------------ -Investigating output/tsv/ncbigene-sgd.tsv +Investigating output/tsv/rhea-uniprot.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:31:56 +0900 +timestamp: 2023-11-12 15:32:36 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:rhea (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-tair.tsv) +Rule for TSV (output/tsv/sra_accession-bioproject.tsv) ------------------------------ -Investigating output/tsv/ncbigene-tair.tsv +Investigating output/tsv/sra_accession-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:33:01 +0900 +timestamp: 2023-11-27 12:55:30 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-taxonomy.tsv) +Rule for TSV (output/tsv/sra_accession-biosample.tsv) ------------------------------ -Investigating output/tsv/ncbigene-taxonomy.tsv +Investigating output/tsv/sra_accession-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:33:41 +0900 +timestamp: 2023-11-27 13:02:17 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-vgnc.tsv) +Rule for TSV (output/tsv/sra_accession-sra_analysis.tsv) ------------------------------ -Investigating output/tsv/ncbigene-vgnc.tsv +Investigating output/tsv/sra_accession-sra_analysis.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:34:47 +0900 +timestamp: 2023-11-27 13:03:17 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-wormbase_gene.tsv) +Rule for TSV (output/tsv/sra_accession-sra_experiment.tsv) ------------------------------ -Investigating output/tsv/ncbigene-wormbase_gene.tsv +Investigating output/tsv/sra_accession-sra_experiment.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:35:51 +0900 +timestamp: 2023-11-27 13:09:20 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-xenbase_gene.tsv) +Rule for TSV (output/tsv/sra_accession-sra_project.tsv) ------------------------------ -Investigating output/tsv/ncbigene-xenbase_gene.tsv +Investigating output/tsv/sra_accession-sra_project.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:36:56 +0900 +timestamp: 2023-11-27 13:10:23 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/ncbigene-zfin_gene.tsv) +Rule for TSV (output/tsv/sra_accession-sra_run.tsv) ------------------------------ -Investigating output/tsv/ncbigene-zfin_gene.tsv +Investigating output/tsv/sra_accession-sra_run.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:38:02 +0900 +timestamp: 2023-11-27 13:17:08 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:ncbigene (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/oma_protein-ensembl_gene.tsv) +Rule for TSV (output/tsv/sra_accession-sra_sample.tsv) ------------------------------ -Investigating output/tsv/oma_protein-ensembl_gene.tsv +Investigating output/tsv/sra_accession-sra_sample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-10-13 19:34:15 +0900 +timestamp: 2023-11-27 13:22:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:oma_protein (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/oma_protein-ensembl_transcript.tsv) +Rule for TSV (output/tsv/sra_experiment-bioproject.tsv) ------------------------------ -Investigating output/tsv/oma_protein-ensembl_transcript.tsv +Investigating output/tsv/sra_experiment-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-10-13 19:43:07 +0900 +timestamp: 2023-11-27 13:25:57 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:oma_protein (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/oma_protein-ncbigene.tsv) +Rule for TSV (output/tsv/sra_experiment-biosample.tsv) ------------------------------ -Investigating output/tsv/oma_protein-ncbigene.tsv +Investigating output/tsv/sra_experiment-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-10-20 20:12:58 +0900 +timestamp: 2023-11-27 13:28:59 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:oma_protein (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/oma_protein-uniprot.tsv) +Rule for TSV (output/tsv/sra_experiment-sra_project.tsv) ------------------------------ -Investigating output/tsv/oma_protein-uniprot.tsv +Investigating output/tsv/sra_experiment-sra_project.tsv class: Rake::FileTask task needed: true -timestamp: 2023-10-13 19:43:31 +0900 +timestamp: 2023-11-27 13:31:37 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:oma_protein (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_gene-ensembl_gene.tsv) +Rule for TSV (output/tsv/sra_experiment-sra_sample.tsv) ------------------------------ -Investigating output/tsv/orphanet_gene-ensembl_gene.tsv +Investigating output/tsv/sra_experiment-sra_sample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:38 +0900 +timestamp: 2023-11-27 13:34:07 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_gene-hgnc.tsv) +Rule for TSV (output/tsv/sra_project-bioproject.tsv) ------------------------------ -Investigating output/tsv/orphanet_gene-hgnc.tsv +Investigating output/tsv/sra_project-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:38 +0900 +timestamp: 2023-11-27 13:35:07 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_gene-omim_gene.tsv) +Rule for TSV (output/tsv/sra_run-bioproject.tsv) ------------------------------ -Investigating output/tsv/orphanet_gene-omim_gene.tsv +Investigating output/tsv/sra_run-bioproject.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:39 +0900 +timestamp: 2023-11-27 13:38:46 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_gene-uniprot.tsv) +Rule for TSV (output/tsv/sra_run-biosample.tsv) ------------------------------ -Investigating output/tsv/orphanet_gene-uniprot.tsv +Investigating output/tsv/sra_run-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:39 +0900 +timestamp: 2023-11-27 13:42:11 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_phenotype-meddra.tsv) +Rule for TSV (output/tsv/sra_run-sra_experiment.tsv) ------------------------------ -Investigating output/tsv/orphanet_phenotype-meddra.tsv +Investigating output/tsv/sra_run-sra_experiment.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:40 +0900 +timestamp: 2023-11-27 13:44:50 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_phenotype-mesh.tsv) +Rule for TSV (output/tsv/sra_run-sra_project.tsv) ------------------------------ -Investigating output/tsv/orphanet_phenotype-mesh.tsv +Investigating output/tsv/sra_run-sra_project.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:40 +0900 +timestamp: 2023-11-27 13:47:46 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_phenotype-omim_phenotype.tsv) +Rule for TSV (output/tsv/sra_run-sra_sample.tsv) ------------------------------ -Investigating output/tsv/orphanet_phenotype-omim_phenotype.tsv +Investigating output/tsv/sra_run-sra_sample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:41 +0900 +timestamp: 2023-11-27 13:50:44 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/orphanet_phenotype-orphanet_gene.tsv) +Rule for TSV (output/tsv/sra_sample-biosample.tsv) ------------------------------ -Investigating output/tsv/orphanet_phenotype-orphanet_gene.tsv +Investigating output/tsv/sra_sample-biosample.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:41 +0900 +timestamp: 2023-11-27 13:53:27 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:sra (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pdb-go.tsv) +Rule for TSV (output/tsv/swisslipids-chebi.tsv) ------------------------------ -Investigating output/tsv/pdb-go.tsv +Investigating output/tsv/swisslipids-chebi.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:46 +0900 +timestamp: 2023-12-02 02:53:29 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:swisslipids (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pdb-interpro.tsv) +Rule for TSV (output/tsv/swisslipids-hmdb.tsv) ------------------------------ -Investigating output/tsv/pdb-interpro.tsv +Investigating output/tsv/swisslipids-hmdb.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:48 +0900 +timestamp: 2023-12-02 02:53:43 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:swisslipids (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pdb-pdb_ccd.tsv) +Rule for TSV (output/tsv/swisslipids-inchi_key.tsv) ------------------------------ -Investigating output/tsv/pdb-pdb_ccd.tsv +Investigating output/tsv/swisslipids-inchi_key.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:49 +0900 +timestamp: 2023-12-02 02:53:55 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:swisslipids (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pdb-pfam.tsv) +Rule for TSV (output/tsv/taxonomy-pubmed.tsv) ------------------------------ -Investigating output/tsv/pdb-pfam.tsv +Investigating output/tsv/taxonomy-pubmed.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:50 +0900 +timestamp: 2023-12-02 02:53:56 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:taxonomy (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pdb-uniprot.tsv) +Rule for TSV (output/tsv/togovar-clinvar.tsv) ------------------------------ -Investigating output/tsv/pdb-uniprot.tsv +Investigating output/tsv/togovar-clinvar.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:51 +0900 +timestamp: 2023-10-27 21:02:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TSV (output/tsv/prosite-prosite_prorule.tsv) +Rule for TSV (output/tsv/uniprot-chembl_target.tsv) ------------------------------ -Investigating output/tsv/prosite-prosite_prorule.tsv +Investigating output/tsv/uniprot-chembl_target.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:53 +0900 +timestamp: 2023-11-12 17:18:25 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:prosite (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_compound-atc.tsv) +Rule for TSV (output/tsv/uniprot-dbsnp.tsv) ------------------------------ -Investigating output/tsv/pubchem_compound-atc.tsv +Investigating output/tsv/uniprot-dbsnp.tsv class: Rake::FileTask task needed: true -timestamp: 2023-08-11 19:32:51 +0900 +timestamp: 2023-11-12 17:18:49 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_compound-chebi.tsv) +Rule for TSV (output/tsv/uniprot-ec.tsv) ------------------------------ -Investigating output/tsv/pubchem_compound-chebi.tsv +Investigating output/tsv/uniprot-ec.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:00:55 +0900 +timestamp: 2023-11-12 17:48:56 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_compound-chembl_compound.tsv) +Rule for TSV (output/tsv/uniprot-ensembl_gene.tsv) ------------------------------ -Investigating output/tsv/pubchem_compound-chembl_compound.tsv +Investigating output/tsv/uniprot-ensembl_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:01:01 +0900 +timestamp: 2023-11-12 18:39:02 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_compound-drugbank.tsv) +Rule for TSV (output/tsv/uniprot-ensembl_protein.tsv) ------------------------------ -Investigating output/tsv/pubchem_compound-drugbank.tsv +Investigating output/tsv/uniprot-ensembl_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:01:01 +0900 +timestamp: 2023-11-12 19:28:13 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_compound-glytoucan.tsv) +Rule for TSV (output/tsv/uniprot-ensembl_transcript.tsv) ------------------------------ -Investigating output/tsv/pubchem_compound-glytoucan.tsv +Investigating output/tsv/uniprot-ensembl_transcript.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:01:02 +0900 +timestamp: 2023-11-12 20:17:32 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_pathway-ncbigene.tsv) +Rule for TSV (output/tsv/uniprot-go.tsv) ------------------------------ -Investigating output/tsv/pubchem_pathway-ncbigene.tsv +Investigating output/tsv/uniprot-go.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:08:37 +0900 +timestamp: 2023-11-12 20:33:52 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_pathway-pathbank.tsv) +Rule for TSV (output/tsv/uniprot-hgnc.tsv) ------------------------------ -Investigating output/tsv/pubchem_pathway-pathbank.tsv +Investigating output/tsv/uniprot-hgnc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:08:38 +0900 +timestamp: 2023-11-12 21:14:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_pathway-pubchem_compound.tsv) +Rule for TSV (output/tsv/uniprot-insdc.tsv) ------------------------------ -Investigating output/tsv/pubchem_pathway-pubchem_compound.tsv +Investigating output/tsv/uniprot-insdc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:08:40 +0900 +timestamp: 2023-11-12 22:03:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_pathway-reactome_pathway.tsv) +Rule for TSV (output/tsv/uniprot-intact.tsv) ------------------------------ -Investigating output/tsv/pubchem_pathway-reactome_pathway.tsv +Investigating output/tsv/uniprot-intact.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:08:41 +0900 +timestamp: 2023-11-12 22:04:53 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_pathway-uniprot.tsv) +Rule for TSV (output/tsv/uniprot-ncbigene.tsv) ------------------------------ -Investigating output/tsv/pubchem_pathway-uniprot.tsv +Investigating output/tsv/uniprot-ncbigene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:08:42 +0900 +timestamp: 2023-11-12 22:46:30 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/pubchem_pathway-wikipathways.tsv) ------------------------------- -Investigating output/tsv/pubchem_pathway-wikipathways.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:08:43 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TSV (output/tsv/reactome_pathway-chebi.tsv) ------------------------------- -Investigating output/tsv/reactome_pathway-chebi.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:06 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_pathway-go.tsv) ------------------------------- -Investigating output/tsv/reactome_pathway-go.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:08:44 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_pathway-iuphar_ligand.tsv) ------------------------------- -Investigating output/tsv/reactome_pathway-iuphar_ligand.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:07 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_pathway-mirbase.tsv) ------------------------------- -Investigating output/tsv/reactome_pathway-mirbase.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:07 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_pathway-reactome_reaction.tsv) ------------------------------- -Investigating output/tsv/reactome_pathway-reactome_reaction.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:08:46 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_pathway-uniprot.tsv) ------------------------------- -Investigating output/tsv/reactome_pathway-uniprot.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:09 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_reaction-chebi.tsv) ------------------------------- -Investigating output/tsv/reactome_reaction-chebi.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:09 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_reaction-go.tsv) ------------------------------- -Investigating output/tsv/reactome_reaction-go.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:08:49 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_reaction-iuphar_ligand.tsv) ------------------------------- -Investigating output/tsv/reactome_reaction-iuphar_ligand.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:10 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_reaction-mirbase.tsv) ------------------------------- -Investigating output/tsv/reactome_reaction-mirbase.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:10 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/reactome_reaction-uniprot.tsv) ------------------------------- -Investigating output/tsv/reactome_reaction-uniprot.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:45:11 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:reactome (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/refseq_protein-uniprot.tsv) ------------------------------- -Investigating output/tsv/refseq_protein-uniprot.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 12:53:34 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_protein (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/refseq_rna-dbsnp.tsv) ------------------------------- -Investigating output/tsv/refseq_rna-dbsnp.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:36:06 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_rna (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/refseq_rna-hgnc.tsv) ------------------------------- -Investigating output/tsv/refseq_rna-hgnc.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:37:34 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_rna (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/refseq_rna-ncbigene.tsv) ------------------------------- -Investigating output/tsv/refseq_rna-ncbigene.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:40:32 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_rna (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/refseq_rna-omim_gene.tsv) ------------------------------- -Investigating output/tsv/refseq_rna-omim_gene.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 02:42:06 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_rna (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/refseq_rna-pubmed.tsv) +Rule for TSV (output/tsv/uniprot-oma_group.tsv) ------------------------------ -Investigating output/tsv/refseq_rna-pubmed.tsv +Investigating output/tsv/uniprot-oma_group.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:43:55 +0900 +timestamp: 2023-11-12 23:28:27 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_rna (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/refseq_rna-refseq_protein.tsv) +Rule for TSV (output/tsv/uniprot-omim_gene.tsv) ------------------------------ -Investigating output/tsv/refseq_rna-refseq_protein.tsv +Investigating output/tsv/uniprot-omim_gene.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:47:16 +0900 +timestamp: 2023-11-12 23:28:33 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_rna (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/refseq_rna-taxonomy.tsv) +Rule for TSV (output/tsv/uniprot-omim_phenotype.tsv) ------------------------------ -Investigating output/tsv/refseq_rna-taxonomy.tsv +Investigating output/tsv/uniprot-omim_phenotype.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-18 02:50:10 +0900 +timestamp: 2023-11-12 23:28:36 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:refseq_rna (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/rhea-chebi.tsv) +Rule for TSV (output/tsv/uniprot-orphanet_phenotype.tsv) ------------------------------ -Investigating output/tsv/rhea-chebi.tsv +Investigating output/tsv/uniprot-orphanet_phenotype.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 15:31:42 +0900 +timestamp: 2023-11-13 00:17:48 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:rhea (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/rhea-ec.tsv) +Rule for TSV (output/tsv/uniprot-pdb.tsv) ------------------------------ -Investigating output/tsv/rhea-ec.tsv +Investigating output/tsv/uniprot-pdb.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 15:31:42 +0900 +timestamp: 2023-11-13 00:59:24 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:rhea (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/rhea-go.tsv) +Rule for TSV (output/tsv/uniprot-reactome_pathway.tsv) ------------------------------ -Investigating output/tsv/rhea-go.tsv +Investigating output/tsv/uniprot-reactome_pathway.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 15:31:43 +0900 +timestamp: 2023-11-13 01:48:51 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:rhea (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/rhea-pubmed.tsv) +Rule for TSV (output/tsv/uniprot-refseq_protein.tsv) ------------------------------ -Investigating output/tsv/rhea-pubmed.tsv +Investigating output/tsv/uniprot-refseq_protein.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 15:31:43 +0900 +timestamp: 2023-11-13 02:32:17 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:rhea (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/rhea-reactome_reaction.tsv) +Rule for TSV (output/tsv/uniprot-uniprot_mnemonic.tsv) ------------------------------ -Investigating output/tsv/rhea-reactome_reaction.tsv +Investigating output/tsv/uniprot-uniprot_mnemonic.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 15:31:44 +0900 +timestamp: 2023-11-13 03:29:18 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:rhea (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/rhea-uniprot.tsv) +Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_insdc.tsv) ------------------------------ -Investigating output/tsv/rhea-uniprot.tsv +Investigating output/tsv/uniprot_reference_proteome-assembly_insdc.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-12 15:32:36 +0900 +timestamp: 2023-11-27 14:01:30 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:rhea (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/sra_accession-bioproject.tsv) +Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_refseq.tsv) ------------------------------ -Investigating output/tsv/sra_accession-bioproject.tsv +Investigating output/tsv/uniprot_reference_proteome-assembly_refseq.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 12:55:30 +0900 +timestamp: 2023-11-27 14:01:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 ................................ -Rule for TSV (output/tsv/sra_accession-biosample.tsv) +Rule for TSV (output/tsv/uniprot_reference_proteome-taxonomy.tsv) ------------------------------ -Investigating output/tsv/sra_accession-biosample.tsv +Investigating output/tsv/uniprot_reference_proteome-taxonomy.tsv class: Rake::FileTask task needed: true -timestamp: 2023-11-27 13:02:17 +0900 +timestamp: 2023-11-27 14:01:31 +0900 pre-requisites: --output/tsv/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_accession-sra_analysis.tsv) ------------------------------- -Investigating output/tsv/sra_accession-sra_analysis.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:03:17 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_accession-sra_experiment.tsv) ------------------------------- -Investigating output/tsv/sra_accession-sra_experiment.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:09:20 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_accession-sra_project.tsv) ------------------------------- -Investigating output/tsv/sra_accession-sra_project.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:10:23 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_accession-sra_run.tsv) ------------------------------- -Investigating output/tsv/sra_accession-sra_run.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:17:08 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_accession-sra_sample.tsv) ------------------------------- -Investigating output/tsv/sra_accession-sra_sample.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:22:44 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_experiment-bioproject.tsv) ------------------------------- -Investigating output/tsv/sra_experiment-bioproject.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:25:57 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_experiment-biosample.tsv) ------------------------------- -Investigating output/tsv/sra_experiment-biosample.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:28:59 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_experiment-sra_project.tsv) ------------------------------- -Investigating output/tsv/sra_experiment-sra_project.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:31:37 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_experiment-sra_sample.tsv) ------------------------------- -Investigating output/tsv/sra_experiment-sra_sample.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:34:07 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_project-bioproject.tsv) ------------------------------- -Investigating output/tsv/sra_project-bioproject.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:35:07 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_run-bioproject.tsv) ------------------------------- -Investigating output/tsv/sra_run-bioproject.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:38:46 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_run-biosample.tsv) ------------------------------- -Investigating output/tsv/sra_run-biosample.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:42:11 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_run-sra_experiment.tsv) ------------------------------- -Investigating output/tsv/sra_run-sra_experiment.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:44:50 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_run-sra_project.tsv) ------------------------------- -Investigating output/tsv/sra_run-sra_project.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:47:46 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_run-sra_sample.tsv) ------------------------------- -Investigating output/tsv/sra_run-sra_sample.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:50:44 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/sra_sample-biosample.tsv) ------------------------------- -Investigating output/tsv/sra_sample-biosample.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:53:27 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:sra (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/swisslipids-chebi.tsv) ------------------------------- -Investigating output/tsv/swisslipids-chebi.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:53:41 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:swisslipids (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/swisslipids-hmdb.tsv) ------------------------------- -Investigating output/tsv/swisslipids-hmdb.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:53:55 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:swisslipids (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/swisslipids-inchi_key.tsv) ------------------------------- -Investigating output/tsv/swisslipids-inchi_key.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:54:07 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:swisslipids (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/taxonomy-pubmed.tsv) ------------------------------- -Investigating output/tsv/taxonomy-pubmed.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 13:54:08 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:taxonomy (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/togovar-clinvar.tsv) ------------------------------- -Investigating output/tsv/togovar-clinvar.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-10-27 21:02:32 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-chembl_target.tsv) ------------------------------- -Investigating output/tsv/uniprot-chembl_target.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 17:18:25 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-dbsnp.tsv) ------------------------------- -Investigating output/tsv/uniprot-dbsnp.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 17:18:49 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-ec.tsv) ------------------------------- -Investigating output/tsv/uniprot-ec.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 17:48:56 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-ensembl_gene.tsv) ------------------------------- -Investigating output/tsv/uniprot-ensembl_gene.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 18:39:02 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-ensembl_protein.tsv) ------------------------------- -Investigating output/tsv/uniprot-ensembl_protein.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 19:28:13 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-ensembl_transcript.tsv) ------------------------------- -Investigating output/tsv/uniprot-ensembl_transcript.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 20:17:32 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-go.tsv) ------------------------------- -Investigating output/tsv/uniprot-go.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 20:33:52 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-hgnc.tsv) ------------------------------- -Investigating output/tsv/uniprot-hgnc.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 21:14:31 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-insdc.tsv) ------------------------------- -Investigating output/tsv/uniprot-insdc.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 22:03:51 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-intact.tsv) ------------------------------- -Investigating output/tsv/uniprot-intact.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 22:04:53 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-ncbigene.tsv) ------------------------------- -Investigating output/tsv/uniprot-ncbigene.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 22:46:30 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-oma_group.tsv) ------------------------------- -Investigating output/tsv/uniprot-oma_group.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 23:28:27 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-omim_gene.tsv) ------------------------------- -Investigating output/tsv/uniprot-omim_gene.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 23:28:33 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-omim_phenotype.tsv) ------------------------------- -Investigating output/tsv/uniprot-omim_phenotype.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-12 23:28:36 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-orphanet_phenotype.tsv) ------------------------------- -Investigating output/tsv/uniprot-orphanet_phenotype.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 00:17:48 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-pdb.tsv) ------------------------------- -Investigating output/tsv/uniprot-pdb.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 00:59:24 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-reactome_pathway.tsv) ------------------------------- -Investigating output/tsv/uniprot-reactome_pathway.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 01:48:51 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-refseq_protein.tsv) ------------------------------- -Investigating output/tsv/uniprot-refseq_protein.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 02:32:17 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot-uniprot_mnemonic.tsv) ------------------------------- -Investigating output/tsv/uniprot-uniprot_mnemonic.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 03:29:18 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_insdc.tsv) ------------------------------- -Investigating output/tsv/uniprot_reference_proteome-assembly_insdc.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:01:30 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_refseq.tsv) ------------------------------- -Investigating output/tsv/uniprot_reference_proteome-assembly_refseq.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:01:31 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -Rule for TSV (output/tsv/uniprot_reference_proteome-taxonomy.tsv) ------------------------------- -Investigating output/tsv/uniprot_reference_proteome-taxonomy.tsv -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:01:31 +0900 -pre-requisites: ---output/tsv/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---prepare:uniprot (2023-11-27 14:01:49 +0900) -latest-prerequisite time: 2023-11-27 14:01:49 +0900 -................................ - -### Update TTL for affy_probeset-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/affy_probeset-ncbigene.ttl is newer than output/tsv/affy_probeset-ncbigene.tsv -# => Preserving output/ttl/affy_probeset-ncbigene.ttl -### Update TTL for assembly_insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/assembly_insdc-bioproject.ttl is newer than output/tsv/assembly_insdc-bioproject.tsv -# => Preserving output/ttl/assembly_insdc-bioproject.ttl -### Update TTL for assembly_insdc-biosample if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/assembly_insdc-biosample.ttl is newer than output/tsv/assembly_insdc-biosample.tsv -# => Preserving output/ttl/assembly_insdc-biosample.ttl -### Update TTL for assembly_insdc-insdc_master if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/assembly_insdc-insdc_master.ttl is newer than output/tsv/assembly_insdc-insdc_master.tsv -# => Preserving output/ttl/assembly_insdc-insdc_master.ttl -### Update TTL for bioproject-biosample if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/bioproject-biosample.ttl is newer than output/tsv/bioproject-biosample.tsv -# => Preserving output/ttl/bioproject-biosample.ttl -### Update TTL for bioproject-geo_series if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/bioproject-geo_series.ttl is older than output/tsv/bioproject-geo_series.tsv -## Convert output/tsv/bioproject-geo_series.tsv => output/ttl/bioproject-geo_series.ttl -< 2023-11-27T14:01:49 bioproject-geo_series -togoid-config config/bioproject-geo_series convert -> 2023-11-27T14:01:51 bioproject-geo_series -### Update TTL for bioproject-pubmed if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/bioproject-pubmed.ttl is older than output/tsv/bioproject-pubmed.tsv -## Convert output/tsv/bioproject-pubmed.tsv => output/ttl/bioproject-pubmed.ttl -< 2023-11-27T14:01:51 bioproject-pubmed -togoid-config config/bioproject-pubmed convert -> 2023-11-27T14:01:53 bioproject-pubmed -### Update TTL for bioproject_umbrella-bioproject if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/bioproject_umbrella-bioproject.ttl is newer than output/tsv/bioproject_umbrella-bioproject.tsv -# => Preserving output/ttl/bioproject_umbrella-bioproject.ttl -### Update TTL for biosample-bioproject if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/biosample-bioproject.ttl is newer than output/tsv/biosample-bioproject.tsv -# => Preserving output/ttl/biosample-bioproject.ttl -### Update TTL for cellosaurus-ncit_disease if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/cellosaurus-ncit_disease.ttl is newer than output/tsv/cellosaurus-ncit_disease.tsv -# => Preserving output/ttl/cellosaurus-ncit_disease.ttl -### Update TTL for cellosaurus-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/cellosaurus-orphanet_phenotype.ttl is newer than output/tsv/cellosaurus-orphanet_phenotype.tsv -# => Preserving output/ttl/cellosaurus-orphanet_phenotype.ttl -### Update TTL for chebi-inchi_key if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chebi-inchi_key.ttl is older than output/tsv/chebi-inchi_key.tsv -## Convert output/tsv/chebi-inchi_key.tsv => output/ttl/chebi-inchi_key.ttl -< 2023-11-27T14:01:53 chebi-inchi_key -togoid-config config/chebi-inchi_key convert -> 2023-11-27T14:01:55 chebi-inchi_key -### Update TTL for chembl_compound-chebi if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-chebi.ttl is older than output/tsv/chembl_compound-chebi.tsv -## Convert output/tsv/chembl_compound-chebi.tsv => output/ttl/chembl_compound-chebi.ttl -< 2023-11-27T14:01:55 chembl_compound-chebi -togoid-config config/chembl_compound-chebi convert -> 2023-11-27T14:01:55 chembl_compound-chebi -### Update TTL for chembl_compound-chembl_target if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-chembl_target.ttl is older than output/tsv/chembl_compound-chembl_target.tsv -## Convert output/tsv/chembl_compound-chembl_target.tsv => output/ttl/chembl_compound-chembl_target.ttl -< 2023-11-27T14:01:55 chembl_compound-chembl_target -togoid-config config/chembl_compound-chembl_target convert -> 2023-11-27T14:02:23 chembl_compound-chembl_target -### Update TTL for chembl_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-drugbank.ttl is older than output/tsv/chembl_compound-drugbank.tsv -## Convert output/tsv/chembl_compound-drugbank.tsv => output/ttl/chembl_compound-drugbank.ttl -< 2023-11-27T14:02:23 chembl_compound-drugbank -togoid-config config/chembl_compound-drugbank convert -> 2023-11-27T14:02:24 chembl_compound-drugbank -### Update TTL for chembl_compound-hmdb if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-hmdb.ttl is older than output/tsv/chembl_compound-hmdb.tsv -## Convert output/tsv/chembl_compound-hmdb.tsv => output/ttl/chembl_compound-hmdb.ttl -< 2023-11-27T14:02:24 chembl_compound-hmdb -togoid-config config/chembl_compound-hmdb convert -> 2023-11-27T14:02:24 chembl_compound-hmdb -### Update TTL for chembl_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-inchi_key.ttl is older than output/tsv/chembl_compound-inchi_key.tsv -## Convert output/tsv/chembl_compound-inchi_key.tsv => output/ttl/chembl_compound-inchi_key.ttl -< 2023-11-27T14:02:24 chembl_compound-inchi_key -togoid-config config/chembl_compound-inchi_key convert -> 2023-11-27T14:02:42 chembl_compound-inchi_key -### Update TTL for chembl_compound-mesh if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-mesh.ttl is older than output/tsv/chembl_compound-mesh.tsv -## Convert output/tsv/chembl_compound-mesh.tsv => output/ttl/chembl_compound-mesh.ttl -< 2023-11-27T14:02:42 chembl_compound-mesh -togoid-config config/chembl_compound-mesh convert -> 2023-11-27T14:02:43 chembl_compound-mesh -### Update TTL for chembl_compound-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-pdb_ccd.ttl is older than output/tsv/chembl_compound-pdb_ccd.tsv -## Convert output/tsv/chembl_compound-pdb_ccd.tsv => output/ttl/chembl_compound-pdb_ccd.ttl -< 2023-11-27T14:02:43 chembl_compound-pdb_ccd -togoid-config config/chembl_compound-pdb_ccd convert -> 2023-11-27T14:02:43 chembl_compound-pdb_ccd -### Update TTL for chembl_compound-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-pubchem_compound.ttl is older than output/tsv/chembl_compound-pubchem_compound.tsv -## Convert output/tsv/chembl_compound-pubchem_compound.tsv => output/ttl/chembl_compound-pubchem_compound.ttl -< 2023-11-27T14:02:43 chembl_compound-pubchem_compound -togoid-config config/chembl_compound-pubchem_compound convert -> 2023-11-27T14:02:59 chembl_compound-pubchem_compound -### Update TTL for chembl_compound-pubchem_substance if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-pubchem_substance.ttl is older than output/tsv/chembl_compound-pubchem_substance.tsv -## Convert output/tsv/chembl_compound-pubchem_substance.tsv => output/ttl/chembl_compound-pubchem_substance.ttl -< 2023-11-27T14:02:59 chembl_compound-pubchem_substance -togoid-config config/chembl_compound-pubchem_substance convert -> 2023-11-27T14:03:03 chembl_compound-pubchem_substance -### Update TTL for chembl_compound-pubmed if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_compound-pubmed.ttl is older than output/tsv/chembl_compound-pubmed.tsv -## Convert output/tsv/chembl_compound-pubmed.tsv => output/ttl/chembl_compound-pubmed.ttl -< 2023-11-27T14:03:03 chembl_compound-pubmed -togoid-config config/chembl_compound-pubmed convert -> 2023-11-27T14:03:14 chembl_compound-pubmed -### Update TTL for chembl_target-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/chembl_target-ensembl_gene.ttl is newer than output/tsv/chembl_target-ensembl_gene.tsv -# => Preserving output/ttl/chembl_target-ensembl_gene.ttl -### Update TTL for chembl_target-go if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_target-go.ttl is older than output/tsv/chembl_target-go.tsv -## Convert output/tsv/chembl_target-go.tsv => output/ttl/chembl_target-go.ttl -< 2023-11-27T14:03:14 chembl_target-go -togoid-config config/chembl_target-go convert -> 2023-11-27T14:03:15 chembl_target-go -### Update TTL for chembl_target-interpro if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_target-interpro.ttl is older than output/tsv/chembl_target-interpro.tsv -## Convert output/tsv/chembl_target-interpro.tsv => output/ttl/chembl_target-interpro.ttl -< 2023-11-27T14:03:15 chembl_target-interpro -togoid-config config/chembl_target-interpro convert -> 2023-11-27T14:03:15 chembl_target-interpro -### Update TTL for chembl_target-pdb if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_target-pdb.ttl is older than output/tsv/chembl_target-pdb.tsv -## Convert output/tsv/chembl_target-pdb.tsv => output/ttl/chembl_target-pdb.ttl -< 2023-11-27T14:03:15 chembl_target-pdb -togoid-config config/chembl_target-pdb convert -> 2023-11-27T14:03:15 chembl_target-pdb -### Update TTL for chembl_target-pfam if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_target-pfam.ttl is older than output/tsv/chembl_target-pfam.tsv -## Convert output/tsv/chembl_target-pfam.tsv => output/ttl/chembl_target-pfam.ttl -< 2023-11-27T14:03:15 chembl_target-pfam -togoid-config config/chembl_target-pfam convert -> 2023-11-27T14:03:15 chembl_target-pfam -### Update TTL for chembl_target-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_target-reactome_pathway.ttl is older than output/tsv/chembl_target-reactome_pathway.tsv -## Convert output/tsv/chembl_target-reactome_pathway.tsv => output/ttl/chembl_target-reactome_pathway.ttl -< 2023-11-27T14:03:15 chembl_target-reactome_pathway -togoid-config config/chembl_target-reactome_pathway convert -> 2023-11-27T14:03:16 chembl_target-reactome_pathway -### Update TTL for chembl_target-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/chembl_target-uniprot.ttl is older than output/tsv/chembl_target-uniprot.tsv -## Convert output/tsv/chembl_target-uniprot.tsv => output/ttl/chembl_target-uniprot.ttl -< 2023-11-27T14:03:16 chembl_target-uniprot -togoid-config config/chembl_target-uniprot convert -> 2023-11-27T14:03:16 chembl_target-uniprot -### Update TTL for clinvar-medgen if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/clinvar-medgen.ttl is older than output/tsv/clinvar-medgen.tsv -## Convert output/tsv/clinvar-medgen.tsv => output/ttl/clinvar-medgen.ttl -< 2023-11-27T14:03:16 clinvar-medgen -togoid-config config/clinvar-medgen convert -> 2023-11-27T14:03:29 clinvar-medgen -### Update TTL for cog-insdc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/cog-insdc.ttl is newer than output/tsv/cog-insdc.tsv -# => Preserving output/ttl/cog-insdc.ttl -### Update TTL for cog-refseq_protein if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/cog-refseq_protein.ttl is newer than output/tsv/cog-refseq_protein.tsv -# => Preserving output/ttl/cog-refseq_protein.ttl -### Update TTL for doid-mesh if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/doid-mesh.ttl is older than output/tsv/doid-mesh.tsv -## Convert output/tsv/doid-mesh.tsv => output/ttl/doid-mesh.ttl -< 2023-11-27T14:03:29 doid-mesh -togoid-config config/doid-mesh convert -> 2023-11-27T14:03:29 doid-mesh -### Update TTL for doid-ncit_disease if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/doid-ncit_disease.ttl is older than output/tsv/doid-ncit_disease.tsv -## Convert output/tsv/doid-ncit_disease.tsv => output/ttl/doid-ncit_disease.ttl -< 2023-11-27T14:03:29 doid-ncit_disease -togoid-config config/doid-ncit_disease convert -> 2023-11-27T14:03:29 doid-ncit_disease -### Update TTL for doid-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/doid-omim_phenotype.ttl is older than output/tsv/doid-omim_phenotype.tsv -## Convert output/tsv/doid-omim_phenotype.tsv => output/ttl/doid-omim_phenotype.ttl -< 2023-11-27T14:03:29 doid-omim_phenotype -togoid-config config/doid-omim_phenotype convert -> 2023-11-27T14:03:29 doid-omim_phenotype -### Update TTL for ensembl_gene-affy_probeset if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ensembl_gene-affy_probeset.ttl is older than output/tsv/ensembl_gene-affy_probeset.tsv -## Convert output/tsv/ensembl_gene-affy_probeset.tsv => output/ttl/ensembl_gene-affy_probeset.ttl -< 2023-11-27T14:03:29 ensembl_gene-affy_probeset -togoid-config config/ensembl_gene-affy_probeset convert -> 2023-11-27T14:03:30 ensembl_gene-affy_probeset -### Update TTL for ensembl_gene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ensembl_gene-ensembl_protein.ttl is older than output/tsv/ensembl_gene-ensembl_protein.tsv -## Convert output/tsv/ensembl_gene-ensembl_protein.tsv => output/ttl/ensembl_gene-ensembl_protein.ttl -< 2023-11-27T14:03:30 ensembl_gene-ensembl_protein -togoid-config config/ensembl_gene-ensembl_protein convert -> 2023-11-27T14:05:23 ensembl_gene-ensembl_protein -### Update TTL for ensembl_gene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ensembl_gene-ensembl_transcript.ttl is older than output/tsv/ensembl_gene-ensembl_transcript.tsv -## Convert output/tsv/ensembl_gene-ensembl_transcript.tsv => output/ttl/ensembl_gene-ensembl_transcript.ttl -< 2023-11-27T14:05:23 ensembl_gene-ensembl_transcript -togoid-config config/ensembl_gene-ensembl_transcript convert -> 2023-11-27T14:07:51 ensembl_gene-ensembl_transcript -### Update TTL for ensembl_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ensembl_gene-hgnc.ttl is older than output/tsv/ensembl_gene-hgnc.tsv -## Convert output/tsv/ensembl_gene-hgnc.tsv => output/ttl/ensembl_gene-hgnc.ttl -< 2023-11-27T14:07:51 ensembl_gene-hgnc -togoid-config config/ensembl_gene-hgnc convert -> 2023-11-27T14:07:51 ensembl_gene-hgnc -### Update TTL for ensembl_gene-ncbigene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ensembl_gene-ncbigene.ttl is older than output/tsv/ensembl_gene-ncbigene.tsv -## Convert output/tsv/ensembl_gene-ncbigene.tsv => output/ttl/ensembl_gene-ncbigene.ttl -< 2023-11-27T14:07:51 ensembl_gene-ncbigene -togoid-config config/ensembl_gene-ncbigene convert -> 2023-11-27T14:08:47 ensembl_gene-ncbigene -### Update TTL for ensembl_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ensembl_gene-uniprot.ttl is older than output/tsv/ensembl_gene-uniprot.tsv -## Convert output/tsv/ensembl_gene-uniprot.tsv => output/ttl/ensembl_gene-uniprot.ttl -< 2023-11-27T14:08:47 ensembl_gene-uniprot -togoid-config config/ensembl_gene-uniprot convert -> 2023-11-27T14:09:28 ensembl_gene-uniprot -### Update TTL for ensembl_protein-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/ensembl_protein-ensembl_transcript.ttl is newer than output/tsv/ensembl_protein-ensembl_transcript.tsv -# => Preserving output/ttl/ensembl_protein-ensembl_transcript.ttl -### Update TTL for ensembl_transcript-affy_probeset if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/ensembl_transcript-affy_probeset.ttl is newer than output/tsv/ensembl_transcript-affy_probeset.tsv -# => Preserving output/ttl/ensembl_transcript-affy_probeset.ttl -### Update TTL for ensembl_transcript-go if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ensembl_transcript-go.ttl is older than output/tsv/ensembl_transcript-go.tsv -## Convert output/tsv/ensembl_transcript-go.tsv => output/ttl/ensembl_transcript-go.ttl -< 2023-11-27T14:09:28 ensembl_transcript-go -togoid-config config/ensembl_transcript-go convert -> 2023-11-27T14:09:28 ensembl_transcript-go -### Update TTL for ensembl_transcript-hgnc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/ensembl_transcript-hgnc.ttl is newer than output/tsv/ensembl_transcript-hgnc.tsv -# => Preserving output/ttl/ensembl_transcript-hgnc.ttl -### Update TTL for ensembl_transcript-refseq_rna if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/ensembl_transcript-refseq_rna.ttl is newer than output/tsv/ensembl_transcript-refseq_rna.tsv -# => Preserving output/ttl/ensembl_transcript-refseq_rna.ttl -### Update TTL for gea-bioproject if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/gea-bioproject.ttl is newer than output/tsv/gea-bioproject.tsv -# => Preserving output/ttl/gea-bioproject.ttl -### Update TTL for gea-biosample if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/gea-biosample.ttl is newer than output/tsv/gea-biosample.tsv -# => Preserving output/ttl/gea-biosample.ttl -### Update TTL for glytoucan-doid if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/glytoucan-doid.ttl is older than output/tsv/glytoucan-doid.tsv -## Convert output/tsv/glytoucan-doid.tsv => output/ttl/glytoucan-doid.ttl -< 2023-11-27T14:09:28 glytoucan-doid -togoid-config config/glytoucan-doid convert -> 2023-11-27T14:09:28 glytoucan-doid -### Update TTL for glytoucan-ncbigene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/glytoucan-ncbigene.ttl is older than output/tsv/glytoucan-ncbigene.tsv -## Convert output/tsv/glytoucan-ncbigene.tsv => output/ttl/glytoucan-ncbigene.ttl -< 2023-11-27T14:09:28 glytoucan-ncbigene -togoid-config config/glytoucan-ncbigene convert -> 2023-11-27T14:09:28 glytoucan-ncbigene -### Update TTL for glytoucan-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/glytoucan-uniprot.ttl is older than output/tsv/glytoucan-uniprot.tsv -## Convert output/tsv/glytoucan-uniprot.tsv => output/ttl/glytoucan-uniprot.ttl -< 2023-11-27T14:09:28 glytoucan-uniprot -togoid-config config/glytoucan-uniprot convert -> 2023-11-27T14:09:29 glytoucan-uniprot -### Update TTL for hgnc-ccds if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-ccds.ttl is newer than output/tsv/hgnc-ccds.tsv -# => Preserving output/ttl/hgnc-ccds.ttl -### Update TTL for hgnc-ec if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-ec.ttl is newer than output/tsv/hgnc-ec.tsv -# => Preserving output/ttl/hgnc-ec.ttl -### Update TTL for hgnc-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-ensembl_gene.ttl is newer than output/tsv/hgnc-ensembl_gene.tsv -# => Preserving output/ttl/hgnc-ensembl_gene.ttl -### Update TTL for hgnc-hgnc_symbol if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-hgnc_symbol.ttl is newer than output/tsv/hgnc-hgnc_symbol.tsv -# => Preserving output/ttl/hgnc-hgnc_symbol.ttl -### Update TTL for hgnc-insdc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-insdc.ttl is newer than output/tsv/hgnc-insdc.tsv -# => Preserving output/ttl/hgnc-insdc.ttl -### Update TTL for hgnc-lrg if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-lrg.ttl is newer than output/tsv/hgnc-lrg.tsv -# => Preserving output/ttl/hgnc-lrg.ttl -### Update TTL for hgnc-mgi_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-mgi_gene.ttl is newer than output/tsv/hgnc-mgi_gene.tsv -# => Preserving output/ttl/hgnc-mgi_gene.ttl -### Update TTL for hgnc-mirbase if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-mirbase.ttl is newer than output/tsv/hgnc-mirbase.tsv -# => Preserving output/ttl/hgnc-mirbase.ttl -### Update TTL for hgnc-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-ncbigene.ttl is newer than output/tsv/hgnc-ncbigene.tsv -# => Preserving output/ttl/hgnc-ncbigene.ttl -### Update TTL for hgnc-omim_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-omim_gene.ttl is newer than output/tsv/hgnc-omim_gene.tsv -# => Preserving output/ttl/hgnc-omim_gene.ttl -### Update TTL for hgnc-pubmed if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-pubmed.ttl is newer than output/tsv/hgnc-pubmed.tsv -# => Preserving output/ttl/hgnc-pubmed.ttl -### Update TTL for hgnc-refseq_rna if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-refseq_rna.ttl is newer than output/tsv/hgnc-refseq_rna.tsv -# => Preserving output/ttl/hgnc-refseq_rna.ttl -### Update TTL for hgnc-rgd if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-rgd.ttl is newer than output/tsv/hgnc-rgd.tsv -# => Preserving output/ttl/hgnc-rgd.ttl -### Update TTL for hgnc-uniprot if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hgnc-uniprot.ttl is newer than output/tsv/hgnc-uniprot.tsv -# => Preserving output/ttl/hgnc-uniprot.ttl -### Update TTL for hmdb-chebi if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hmdb-chebi.ttl is newer than output/tsv/hmdb-chebi.tsv -# => Preserving output/ttl/hmdb-chebi.ttl -### Update TTL for hmdb-inchi_key if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hmdb-inchi_key.ttl is newer than output/tsv/hmdb-inchi_key.tsv -# => Preserving output/ttl/hmdb-inchi_key.ttl -### Update TTL for hmdb-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hmdb-pdb_ccd.ttl is newer than output/tsv/hmdb-pdb_ccd.tsv -# => Preserving output/ttl/hmdb-pdb_ccd.ttl -### Update TTL for hmdb-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hmdb-pubchem_compound.ttl is newer than output/tsv/hmdb-pubchem_compound.tsv -# => Preserving output/ttl/hmdb-pubchem_compound.ttl -### Update TTL for homologene-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/homologene-ncbigene.ttl is newer than output/tsv/homologene-ncbigene.tsv -# => Preserving output/ttl/homologene-ncbigene.ttl -### Update TTL for hp_inheritance-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hp_inheritance-omim_phenotype.ttl is newer than output/tsv/hp_inheritance-omim_phenotype.tsv -# => Preserving output/ttl/hp_inheritance-omim_phenotype.ttl -### Update TTL for hp_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hp_phenotype-omim_phenotype.ttl is newer than output/tsv/hp_phenotype-omim_phenotype.tsv -# => Preserving output/ttl/hp_phenotype-omim_phenotype.ttl -### Update TTL for hp_phenotype-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/hp_phenotype-orphanet_phenotype.ttl is newer than output/tsv/hp_phenotype-orphanet_phenotype.tsv -# => Preserving output/ttl/hp_phenotype-orphanet_phenotype.ttl -### Update TTL for insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/insdc-bioproject.ttl is newer than output/tsv/insdc-bioproject.tsv -# => Preserving output/ttl/insdc-bioproject.ttl -### Update TTL for insdc-biosample if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/insdc-biosample.ttl is newer than output/tsv/insdc-biosample.tsv -# => Preserving output/ttl/insdc-biosample.ttl -### Update TTL for insdc_master-bioproject if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/insdc_master-bioproject.ttl is newer than output/tsv/insdc_master-bioproject.tsv -# => Preserving output/ttl/insdc_master-bioproject.ttl -### Update TTL for insdc_master-biosample if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/insdc_master-biosample.ttl is newer than output/tsv/insdc_master-biosample.tsv -# => Preserving output/ttl/insdc_master-biosample.ttl -### Update TTL for interpro-go if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-go.ttl is newer than output/tsv/interpro-go.tsv -# => Preserving output/ttl/interpro-go.ttl -### Update TTL for interpro-pdb if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-pdb.ttl is newer than output/tsv/interpro-pdb.tsv -# => Preserving output/ttl/interpro-pdb.ttl -### Update TTL for interpro-pfam if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-pfam.ttl is newer than output/tsv/interpro-pfam.tsv -# => Preserving output/ttl/interpro-pfam.ttl -### Update TTL for interpro-prosite if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-prosite.ttl is newer than output/tsv/interpro-prosite.tsv -# => Preserving output/ttl/interpro-prosite.ttl -### Update TTL for interpro-pubmed if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-pubmed.ttl is newer than output/tsv/interpro-pubmed.tsv -# => Preserving output/ttl/interpro-pubmed.ttl -### Update TTL for interpro-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-reactome_pathway.ttl is newer than output/tsv/interpro-reactome_pathway.tsv -# => Preserving output/ttl/interpro-reactome_pathway.ttl -### Update TTL for interpro-smart if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-smart.ttl is newer than output/tsv/interpro-smart.tsv -# => Preserving output/ttl/interpro-smart.ttl -### Update TTL for interpro-uniprot if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/interpro-uniprot.ttl is newer than output/tsv/interpro-uniprot.tsv -# => Preserving output/ttl/interpro-uniprot.ttl -### Update TTL for jga_study-jga_dataset if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/jga_study-jga_dataset.ttl is newer than output/tsv/jga_study-jga_dataset.tsv -# => Preserving output/ttl/jga_study-jga_dataset.ttl -### Update TTL for jga_study-nbdc_human_db if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/jga_study-nbdc_human_db.ttl is newer than output/tsv/jga_study-nbdc_human_db.tsv -# => Preserving output/ttl/jga_study-nbdc_human_db.ttl -### Update TTL for jga_study-pubmed if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/jga_study-pubmed.ttl is newer than output/tsv/jga_study-pubmed.tsv -# => Preserving output/ttl/jga_study-pubmed.ttl -### Update TTL for lipidmaps-chebi if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/lipidmaps-chebi.ttl is older than output/tsv/lipidmaps-chebi.tsv -## Convert output/tsv/lipidmaps-chebi.tsv => output/ttl/lipidmaps-chebi.ttl -< 2023-11-27T14:09:29 lipidmaps-chebi -togoid-config config/lipidmaps-chebi convert -> 2023-11-27T14:09:29 lipidmaps-chebi -### Update TTL for lipidmaps-inchi_key if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/lipidmaps-inchi_key.ttl is older than output/tsv/lipidmaps-inchi_key.tsv -## Convert output/tsv/lipidmaps-inchi_key.tsv => output/ttl/lipidmaps-inchi_key.ttl -< 2023-11-27T14:09:29 lipidmaps-inchi_key -togoid-config config/lipidmaps-inchi_key convert -> 2023-11-27T14:09:30 lipidmaps-inchi_key -### Update TTL for lipidmaps-swisslipids if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/lipidmaps-swisslipids.ttl is older than output/tsv/lipidmaps-swisslipids.tsv -## Convert output/tsv/lipidmaps-swisslipids.tsv => output/ttl/lipidmaps-swisslipids.ttl -< 2023-11-27T14:09:30 lipidmaps-swisslipids -togoid-config config/lipidmaps-swisslipids convert -> 2023-11-27T14:09:30 lipidmaps-swisslipids -### Update TTL for mbgd_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mbgd_gene-uniprot.ttl is older than output/tsv/mbgd_gene-uniprot.tsv -## Convert output/tsv/mbgd_gene-uniprot.tsv => output/ttl/mbgd_gene-uniprot.ttl -< 2023-11-27T14:09:30 mbgd_gene-uniprot -togoid-config config/mbgd_gene-uniprot convert -> 2023-11-27T15:03:58 mbgd_gene-uniprot -### Update TTL for mbgd_organism-taxonomy if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mbgd_organism-taxonomy.ttl is older than output/tsv/mbgd_organism-taxonomy.tsv -## Convert output/tsv/mbgd_organism-taxonomy.tsv => output/ttl/mbgd_organism-taxonomy.ttl -< 2023-11-27T15:03:58 mbgd_organism-taxonomy -togoid-config config/mbgd_organism-taxonomy convert -> 2023-11-27T15:03:59 mbgd_organism-taxonomy -### Update TTL for medgen-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/medgen-hp_phenotype.ttl is newer than output/tsv/medgen-hp_phenotype.tsv -# => Preserving output/ttl/medgen-hp_phenotype.ttl -### Update TTL for medgen-mesh if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/medgen-mesh.ttl is newer than output/tsv/medgen-mesh.tsv -# => Preserving output/ttl/medgen-mesh.ttl -### Update TTL for medgen-mondo if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/medgen-mondo.ttl is newer than output/tsv/medgen-mondo.tsv -# => Preserving output/ttl/medgen-mondo.ttl -### Update TTL for medgen-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/medgen-ncbigene.ttl is newer than output/tsv/medgen-ncbigene.tsv -# => Preserving output/ttl/medgen-ncbigene.ttl -### Update TTL for medgen-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/medgen-omim_phenotype.ttl is newer than output/tsv/medgen-omim_phenotype.tsv -# => Preserving output/ttl/medgen-omim_phenotype.ttl -### Update TTL for medgen-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/medgen-orphanet_phenotype.ttl is newer than output/tsv/medgen-orphanet_phenotype.tsv -# => Preserving output/ttl/medgen-orphanet_phenotype.ttl -### Update TTL for mgi_gene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_gene-ensembl_gene.ttl is older than output/tsv/mgi_gene-ensembl_gene.tsv -## Convert output/tsv/mgi_gene-ensembl_gene.tsv => output/ttl/mgi_gene-ensembl_gene.ttl -< 2023-11-27T15:03:59 mgi_gene-ensembl_gene -togoid-config config/mgi_gene-ensembl_gene convert -> 2023-11-27T15:04:00 mgi_gene-ensembl_gene -### Update TTL for mgi_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_gene-hgnc.ttl is older than output/tsv/mgi_gene-hgnc.tsv -## Convert output/tsv/mgi_gene-hgnc.tsv => output/ttl/mgi_gene-hgnc.ttl -< 2023-11-27T15:04:00 mgi_gene-hgnc -togoid-config config/mgi_gene-hgnc convert -> 2023-11-27T15:04:00 mgi_gene-hgnc -### Update TTL for mgi_gene-mgi_allele if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_gene-mgi_allele.ttl is older than output/tsv/mgi_gene-mgi_allele.tsv -## Convert output/tsv/mgi_gene-mgi_allele.tsv => output/ttl/mgi_gene-mgi_allele.ttl -< 2023-11-27T15:04:00 mgi_gene-mgi_allele -togoid-config config/mgi_gene-mgi_allele convert -> 2023-11-27T15:04:01 mgi_gene-mgi_allele -### Update TTL for mgi_gene-ncbigene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_gene-ncbigene.ttl is older than output/tsv/mgi_gene-ncbigene.tsv -## Convert output/tsv/mgi_gene-ncbigene.tsv => output/ttl/mgi_gene-ncbigene.ttl -< 2023-11-27T15:04:01 mgi_gene-ncbigene -togoid-config config/mgi_gene-ncbigene convert -> 2023-11-27T15:04:02 mgi_gene-ncbigene -### Update TTL for mgi_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_gene-uniprot.ttl is older than output/tsv/mgi_gene-uniprot.tsv -## Convert output/tsv/mgi_gene-uniprot.tsv => output/ttl/mgi_gene-uniprot.ttl -< 2023-11-27T15:04:02 mgi_gene-uniprot -togoid-config config/mgi_gene-uniprot convert -> 2023-11-27T15:04:03 mgi_gene-uniprot -### Update TTL for mgi_genotype-doid if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_genotype-doid.ttl is older than output/tsv/mgi_genotype-doid.tsv -## Convert output/tsv/mgi_genotype-doid.tsv => output/ttl/mgi_genotype-doid.ttl -< 2023-11-27T15:04:03 mgi_genotype-doid -togoid-config config/mgi_genotype-doid convert -> 2023-11-27T15:04:03 mgi_genotype-doid -### Update TTL for mgi_genotype-mgi_allele if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_genotype-mgi_allele.ttl is older than output/tsv/mgi_genotype-mgi_allele.tsv -## Convert output/tsv/mgi_genotype-mgi_allele.tsv => output/ttl/mgi_genotype-mgi_allele.ttl -< 2023-11-27T15:04:03 mgi_genotype-mgi_allele -togoid-config config/mgi_genotype-mgi_allele convert -> 2023-11-27T15:04:04 mgi_genotype-mgi_allele -### Update TTL for mgi_genotype-mp if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/mgi_genotype-mp.ttl is older than output/tsv/mgi_genotype-mp.tsv -## Convert output/tsv/mgi_genotype-mp.tsv => output/ttl/mgi_genotype-mp.ttl -< 2023-11-27T15:04:04 mgi_genotype-mp -togoid-config config/mgi_genotype-mp convert -> 2023-11-27T15:04:08 mgi_genotype-mp -### Update TTL for mondo-doid if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/mondo-doid.ttl is newer than output/tsv/mondo-doid.tsv -# => Preserving output/ttl/mondo-doid.ttl -### Update TTL for mondo-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/mondo-hp_phenotype.ttl is newer than output/tsv/mondo-hp_phenotype.tsv -# => Preserving output/ttl/mondo-hp_phenotype.ttl -### Update TTL for mondo-meddra if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/mondo-meddra.ttl is newer than output/tsv/mondo-meddra.tsv -# => Preserving output/ttl/mondo-meddra.ttl -### Update TTL for mondo-mesh if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/mondo-mesh.ttl is newer than output/tsv/mondo-mesh.tsv -# => Preserving output/ttl/mondo-mesh.ttl -### Update TTL for mondo-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/mondo-omim_phenotype.ttl is newer than output/tsv/mondo-omim_phenotype.tsv -# => Preserving output/ttl/mondo-omim_phenotype.ttl -### Update TTL for mondo-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/mondo-orphanet_phenotype.ttl is newer than output/tsv/mondo-orphanet_phenotype.tsv -# => Preserving output/ttl/mondo-orphanet_phenotype.ttl -### Update TTL for nando-mondo if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/nando-mondo.ttl is newer than output/tsv/nando-mondo.tsv -# => Preserving output/ttl/nando-mondo.ttl -### Update TTL for ncbigene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-ensembl_gene.ttl is older than output/tsv/ncbigene-ensembl_gene.tsv -## Convert output/tsv/ncbigene-ensembl_gene.tsv => output/ttl/ncbigene-ensembl_gene.ttl -< 2023-11-27T15:04:08 ncbigene-ensembl_gene -togoid-config config/ncbigene-ensembl_gene convert -> 2023-11-27T15:05:25 ncbigene-ensembl_gene -### Update TTL for ncbigene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-ensembl_protein.ttl is older than output/tsv/ncbigene-ensembl_protein.tsv -## Convert output/tsv/ncbigene-ensembl_protein.tsv => output/ttl/ncbigene-ensembl_protein.ttl -< 2023-11-27T15:05:25 ncbigene-ensembl_protein -togoid-config config/ncbigene-ensembl_protein convert -> 2023-11-27T15:07:06 ncbigene-ensembl_protein -### Update TTL for ncbigene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-ensembl_transcript.ttl is older than output/tsv/ncbigene-ensembl_transcript.tsv -## Convert output/tsv/ncbigene-ensembl_transcript.tsv => output/ttl/ncbigene-ensembl_transcript.ttl -< 2023-11-27T15:07:06 ncbigene-ensembl_transcript -togoid-config config/ncbigene-ensembl_transcript convert -> 2023-11-27T15:08:41 ncbigene-ensembl_transcript -### Update TTL for ncbigene-flybase_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-flybase_gene.ttl is older than output/tsv/ncbigene-flybase_gene.tsv -## Convert output/tsv/ncbigene-flybase_gene.tsv => output/ttl/ncbigene-flybase_gene.ttl -< 2023-11-27T15:08:41 ncbigene-flybase_gene -togoid-config config/ncbigene-flybase_gene convert -> 2023-11-27T15:08:41 ncbigene-flybase_gene -### Update TTL for ncbigene-go if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-go.ttl is older than output/tsv/ncbigene-go.tsv -## Convert output/tsv/ncbigene-go.tsv => output/ttl/ncbigene-go.ttl -< 2023-11-27T15:08:41 ncbigene-go -togoid-config config/ncbigene-go convert -> 2023-11-27T15:16:59 ncbigene-go -### Update TTL for ncbigene-hgnc if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-hgnc.ttl is older than output/tsv/ncbigene-hgnc.tsv -## Convert output/tsv/ncbigene-hgnc.tsv => output/ttl/ncbigene-hgnc.ttl -< 2023-11-27T15:16:59 ncbigene-hgnc -togoid-config config/ncbigene-hgnc convert -> 2023-11-27T15:17:00 ncbigene-hgnc -### Update TTL for ncbigene-mgi_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-mgi_gene.ttl is older than output/tsv/ncbigene-mgi_gene.tsv -## Convert output/tsv/ncbigene-mgi_gene.tsv => output/ttl/ncbigene-mgi_gene.ttl -< 2023-11-27T15:17:00 ncbigene-mgi_gene -togoid-config config/ncbigene-mgi_gene convert -> 2023-11-27T15:17:02 ncbigene-mgi_gene -### Update TTL for ncbigene-mirbase if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-mirbase.ttl is older than output/tsv/ncbigene-mirbase.tsv -## Convert output/tsv/ncbigene-mirbase.tsv => output/ttl/ncbigene-mirbase.ttl -< 2023-11-27T15:17:02 ncbigene-mirbase -togoid-config config/ncbigene-mirbase convert -> 2023-11-27T15:17:03 ncbigene-mirbase -### Update TTL for ncbigene-omim_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-omim_gene.ttl is older than output/tsv/ncbigene-omim_gene.tsv -## Convert output/tsv/ncbigene-omim_gene.tsv => output/ttl/ncbigene-omim_gene.ttl -< 2023-11-27T15:17:03 ncbigene-omim_gene -togoid-config config/ncbigene-omim_gene convert -> 2023-11-27T15:17:04 ncbigene-omim_gene -### Update TTL for ncbigene-refseq_genomic if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-refseq_genomic.ttl is older than output/tsv/ncbigene-refseq_genomic.tsv -## Convert output/tsv/ncbigene-refseq_genomic.tsv => output/ttl/ncbigene-refseq_genomic.ttl -< 2023-11-27T15:17:04 ncbigene-refseq_genomic -togoid-config config/ncbigene-refseq_genomic convert -> 2023-11-27T15:17:07 ncbigene-refseq_genomic -### Update TTL for ncbigene-refseq_protein if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-refseq_protein.ttl is older than output/tsv/ncbigene-refseq_protein.tsv -## Convert output/tsv/ncbigene-refseq_protein.tsv => output/ttl/ncbigene-refseq_protein.ttl -< 2023-11-27T15:17:07 ncbigene-refseq_protein -togoid-config config/ncbigene-refseq_protein convert -> 2023-11-27T15:30:03 ncbigene-refseq_protein -### Update TTL for ncbigene-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-refseq_rna.ttl is older than output/tsv/ncbigene-refseq_rna.tsv -## Convert output/tsv/ncbigene-refseq_rna.tsv => output/ttl/ncbigene-refseq_rna.ttl -< 2023-11-27T15:30:03 ncbigene-refseq_rna -togoid-config config/ncbigene-refseq_rna convert -> 2023-11-27T15:40:10 ncbigene-refseq_rna -### Update TTL for ncbigene-rgd if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-rgd.ttl is older than output/tsv/ncbigene-rgd.tsv -## Convert output/tsv/ncbigene-rgd.tsv => output/ttl/ncbigene-rgd.ttl -< 2023-11-27T15:40:10 ncbigene-rgd -togoid-config config/ncbigene-rgd convert -> 2023-11-27T15:40:11 ncbigene-rgd -### Update TTL for ncbigene-sgd if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-sgd.ttl is older than output/tsv/ncbigene-sgd.tsv -## Convert output/tsv/ncbigene-sgd.tsv => output/ttl/ncbigene-sgd.ttl -< 2023-11-27T15:40:11 ncbigene-sgd -togoid-config config/ncbigene-sgd convert -> 2023-11-27T15:40:11 ncbigene-sgd -### Update TTL for ncbigene-tair if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-tair.ttl is older than output/tsv/ncbigene-tair.tsv -## Convert output/tsv/ncbigene-tair.tsv => output/ttl/ncbigene-tair.ttl -< 2023-11-27T15:40:11 ncbigene-tair -togoid-config config/ncbigene-tair convert -> 2023-11-27T15:40:12 ncbigene-tair -### Update TTL for ncbigene-taxonomy if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-taxonomy.ttl is older than output/tsv/ncbigene-taxonomy.tsv -## Convert output/tsv/ncbigene-taxonomy.tsv => output/ttl/ncbigene-taxonomy.ttl -< 2023-11-27T15:40:12 ncbigene-taxonomy -togoid-config config/ncbigene-taxonomy convert -> 2023-11-27T15:47:47 ncbigene-taxonomy -### Update TTL for ncbigene-vgnc if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-vgnc.ttl is older than output/tsv/ncbigene-vgnc.tsv -## Convert output/tsv/ncbigene-vgnc.tsv => output/ttl/ncbigene-vgnc.ttl -< 2023-11-27T15:47:47 ncbigene-vgnc -togoid-config config/ncbigene-vgnc convert -> 2023-11-27T15:47:48 ncbigene-vgnc -### Update TTL for ncbigene-wormbase_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-wormbase_gene.ttl is older than output/tsv/ncbigene-wormbase_gene.tsv -## Convert output/tsv/ncbigene-wormbase_gene.tsv => output/ttl/ncbigene-wormbase_gene.ttl -< 2023-11-27T15:47:48 ncbigene-wormbase_gene -togoid-config config/ncbigene-wormbase_gene convert -> 2023-11-27T15:47:49 ncbigene-wormbase_gene -### Update TTL for ncbigene-xenbase_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-xenbase_gene.ttl is older than output/tsv/ncbigene-xenbase_gene.tsv -## Convert output/tsv/ncbigene-xenbase_gene.tsv => output/ttl/ncbigene-xenbase_gene.ttl -< 2023-11-27T15:47:49 ncbigene-xenbase_gene -togoid-config config/ncbigene-xenbase_gene convert -> 2023-11-27T15:47:49 ncbigene-xenbase_gene -### Update TTL for ncbigene-zfin_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncbigene-zfin_gene.ttl is older than output/tsv/ncbigene-zfin_gene.tsv -## Convert output/tsv/ncbigene-zfin_gene.tsv => output/ttl/ncbigene-zfin_gene.ttl -< 2023-11-27T15:47:49 ncbigene-zfin_gene -togoid-config config/ncbigene-zfin_gene convert -> 2023-11-27T15:47:50 ncbigene-zfin_gene -### Update TTL for ncit_disease-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/ncit_disease-ncit_tissue.ttl is older than output/tsv/ncit_disease-ncit_tissue.tsv -## Convert output/tsv/ncit_disease-ncit_tissue.tsv => output/ttl/ncit_disease-ncit_tissue.ttl -< 2023-11-27T15:47:50 ncit_disease-ncit_tissue -togoid-config config/ncit_disease-ncit_tissue convert -> 2023-11-27T15:47:50 ncit_disease-ncit_tissue -### Update TTL for oma_protein-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/oma_protein-ensembl_gene.ttl is newer than output/tsv/oma_protein-ensembl_gene.tsv -# => Preserving output/ttl/oma_protein-ensembl_gene.ttl -### Update TTL for oma_protein-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/oma_protein-ensembl_transcript.ttl is newer than output/tsv/oma_protein-ensembl_transcript.tsv -# => Preserving output/ttl/oma_protein-ensembl_transcript.ttl -### Update TTL for oma_protein-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/oma_protein-ncbigene.ttl is newer than output/tsv/oma_protein-ncbigene.tsv -# => Preserving output/ttl/oma_protein-ncbigene.ttl -### Update TTL for oma_protein-uniprot if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/oma_protein-uniprot.ttl is newer than output/tsv/oma_protein-uniprot.tsv -# => Preserving output/ttl/oma_protein-uniprot.ttl -### Update TTL for orphanet_gene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_gene-ensembl_gene.ttl is newer than output/tsv/orphanet_gene-ensembl_gene.tsv -# => Preserving output/ttl/orphanet_gene-ensembl_gene.ttl -### Update TTL for orphanet_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_gene-hgnc.ttl is newer than output/tsv/orphanet_gene-hgnc.tsv -# => Preserving output/ttl/orphanet_gene-hgnc.ttl -### Update TTL for orphanet_gene-omim_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_gene-omim_gene.ttl is newer than output/tsv/orphanet_gene-omim_gene.tsv -# => Preserving output/ttl/orphanet_gene-omim_gene.ttl -### Update TTL for orphanet_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_gene-uniprot.ttl is newer than output/tsv/orphanet_gene-uniprot.tsv -# => Preserving output/ttl/orphanet_gene-uniprot.ttl -### Update TTL for orphanet_phenotype-meddra if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_phenotype-meddra.ttl is newer than output/tsv/orphanet_phenotype-meddra.tsv -# => Preserving output/ttl/orphanet_phenotype-meddra.ttl -### Update TTL for orphanet_phenotype-mesh if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_phenotype-mesh.ttl is newer than output/tsv/orphanet_phenotype-mesh.tsv -# => Preserving output/ttl/orphanet_phenotype-mesh.ttl -### Update TTL for orphanet_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_phenotype-omim_phenotype.ttl is newer than output/tsv/orphanet_phenotype-omim_phenotype.tsv -# => Preserving output/ttl/orphanet_phenotype-omim_phenotype.ttl -### Update TTL for orphanet_phenotype-orphanet_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/orphanet_phenotype-orphanet_gene.ttl is newer than output/tsv/orphanet_phenotype-orphanet_gene.tsv -# => Preserving output/ttl/orphanet_phenotype-orphanet_gene.ttl -### Update TTL for pdb-go if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pdb-go.ttl is newer than output/tsv/pdb-go.tsv -# => Preserving output/ttl/pdb-go.ttl -### Update TTL for pdb-interpro if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pdb-interpro.ttl is newer than output/tsv/pdb-interpro.tsv -# => Preserving output/ttl/pdb-interpro.ttl -### Update TTL for pdb-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pdb-pdb_ccd.ttl is newer than output/tsv/pdb-pdb_ccd.tsv -# => Preserving output/ttl/pdb-pdb_ccd.ttl -### Update TTL for pdb-pfam if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pdb-pfam.ttl is newer than output/tsv/pdb-pfam.tsv -# => Preserving output/ttl/pdb-pfam.ttl -### Update TTL for pdb-uniprot if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pdb-uniprot.ttl is newer than output/tsv/pdb-uniprot.tsv -# => Preserving output/ttl/pdb-uniprot.ttl -### Update TTL for prosite-prosite_prorule if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/prosite-prosite_prorule.ttl is newer than output/tsv/prosite-prosite_prorule.tsv -# => Preserving output/ttl/prosite-prosite_prorule.ttl -### Update TTL for pubchem_compound-atc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_compound-atc.ttl is newer than output/tsv/pubchem_compound-atc.tsv -# => Preserving output/ttl/pubchem_compound-atc.ttl -### Update TTL for pubchem_compound-chebi if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_compound-chebi.ttl is newer than output/tsv/pubchem_compound-chebi.tsv -# => Preserving output/ttl/pubchem_compound-chebi.ttl -### Update TTL for pubchem_compound-chembl_compound if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_compound-chembl_compound.ttl is newer than output/tsv/pubchem_compound-chembl_compound.tsv -# => Preserving output/ttl/pubchem_compound-chembl_compound.ttl -### Update TTL for pubchem_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_compound-drugbank.ttl is newer than output/tsv/pubchem_compound-drugbank.tsv -# => Preserving output/ttl/pubchem_compound-drugbank.ttl -### Update TTL for pubchem_compound-glytoucan if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_compound-glytoucan.ttl is newer than output/tsv/pubchem_compound-glytoucan.tsv -# => Preserving output/ttl/pubchem_compound-glytoucan.ttl -### Update TTL for pubchem_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/pubchem_compound-inchi_key.ttl is older than output/tsv/pubchem_compound-inchi_key.tsv -## Convert output/tsv/pubchem_compound-inchi_key.tsv => output/ttl/pubchem_compound-inchi_key.ttl -< 2023-11-27T15:47:50 pubchem_compound-inchi_key -togoid-config config/pubchem_compound-inchi_key convert -> 2023-11-27T16:27:49 pubchem_compound-inchi_key -### Update TTL for pubchem_pathway-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_pathway-ncbigene.ttl is newer than output/tsv/pubchem_pathway-ncbigene.tsv -# => Preserving output/ttl/pubchem_pathway-ncbigene.ttl -### Update TTL for pubchem_pathway-pathbank if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_pathway-pathbank.ttl is newer than output/tsv/pubchem_pathway-pathbank.tsv -# => Preserving output/ttl/pubchem_pathway-pathbank.ttl -### Update TTL for pubchem_pathway-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_pathway-pubchem_compound.ttl is newer than output/tsv/pubchem_pathway-pubchem_compound.tsv -# => Preserving output/ttl/pubchem_pathway-pubchem_compound.ttl -### Update TTL for pubchem_pathway-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_pathway-reactome_pathway.ttl is newer than output/tsv/pubchem_pathway-reactome_pathway.tsv -# => Preserving output/ttl/pubchem_pathway-reactome_pathway.ttl -### Update TTL for pubchem_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_pathway-uniprot.ttl is newer than output/tsv/pubchem_pathway-uniprot.tsv -# => Preserving output/ttl/pubchem_pathway-uniprot.ttl -### Update TTL for pubchem_pathway-wikipathways if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/pubchem_pathway-wikipathways.ttl is newer than output/tsv/pubchem_pathway-wikipathways.tsv -# => Preserving output/ttl/pubchem_pathway-wikipathways.ttl -### Update TTL for reactome_pathway-chebi if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_pathway-chebi.ttl is older than output/tsv/reactome_pathway-chebi.tsv -## Convert output/tsv/reactome_pathway-chebi.tsv => output/ttl/reactome_pathway-chebi.ttl -< 2023-11-27T16:27:49 reactome_pathway-chebi -togoid-config config/reactome_pathway-chebi convert -> 2023-11-27T16:27:52 reactome_pathway-chebi -### Update TTL for reactome_pathway-go if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/reactome_pathway-go.ttl is newer than output/tsv/reactome_pathway-go.tsv -# => Preserving output/ttl/reactome_pathway-go.ttl -### Update TTL for reactome_pathway-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_pathway-iuphar_ligand.ttl is older than output/tsv/reactome_pathway-iuphar_ligand.tsv -## Convert output/tsv/reactome_pathway-iuphar_ligand.tsv => output/ttl/reactome_pathway-iuphar_ligand.ttl -< 2023-11-27T16:27:52 reactome_pathway-iuphar_ligand -togoid-config config/reactome_pathway-iuphar_ligand convert -> 2023-11-27T16:27:53 reactome_pathway-iuphar_ligand -### Update TTL for reactome_pathway-mirbase if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_pathway-mirbase.ttl is older than output/tsv/reactome_pathway-mirbase.tsv -## Convert output/tsv/reactome_pathway-mirbase.tsv => output/ttl/reactome_pathway-mirbase.ttl -< 2023-11-27T16:27:53 reactome_pathway-mirbase -togoid-config config/reactome_pathway-mirbase convert -> 2023-11-27T16:27:53 reactome_pathway-mirbase -### Update TTL for reactome_pathway-reactome_reaction if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/reactome_pathway-reactome_reaction.ttl is newer than output/tsv/reactome_pathway-reactome_reaction.tsv -# => Preserving output/ttl/reactome_pathway-reactome_reaction.ttl -### Update TTL for reactome_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_pathway-uniprot.ttl is older than output/tsv/reactome_pathway-uniprot.tsv -## Convert output/tsv/reactome_pathway-uniprot.tsv => output/ttl/reactome_pathway-uniprot.ttl -< 2023-11-27T16:27:53 reactome_pathway-uniprot -togoid-config config/reactome_pathway-uniprot convert -> 2023-11-27T16:28:00 reactome_pathway-uniprot -### Update TTL for reactome_reaction-chebi if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_reaction-chebi.ttl is older than output/tsv/reactome_reaction-chebi.tsv -## Convert output/tsv/reactome_reaction-chebi.tsv => output/ttl/reactome_reaction-chebi.ttl -< 2023-11-27T16:28:00 reactome_reaction-chebi -togoid-config config/reactome_reaction-chebi convert -> 2023-11-27T16:28:02 reactome_reaction-chebi -### Update TTL for reactome_reaction-go if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/reactome_reaction-go.ttl is newer than output/tsv/reactome_reaction-go.tsv -# => Preserving output/ttl/reactome_reaction-go.ttl -### Update TTL for reactome_reaction-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_reaction-iuphar_ligand.ttl is older than output/tsv/reactome_reaction-iuphar_ligand.tsv -## Convert output/tsv/reactome_reaction-iuphar_ligand.tsv => output/ttl/reactome_reaction-iuphar_ligand.ttl -< 2023-11-27T16:28:02 reactome_reaction-iuphar_ligand -togoid-config config/reactome_reaction-iuphar_ligand convert -> 2023-11-27T16:28:02 reactome_reaction-iuphar_ligand -### Update TTL for reactome_reaction-mirbase if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_reaction-mirbase.ttl is older than output/tsv/reactome_reaction-mirbase.tsv -## Convert output/tsv/reactome_reaction-mirbase.tsv => output/ttl/reactome_reaction-mirbase.ttl -< 2023-11-27T16:28:02 reactome_reaction-mirbase -togoid-config config/reactome_reaction-mirbase convert -> 2023-11-27T16:28:03 reactome_reaction-mirbase -### Update TTL for reactome_reaction-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/reactome_reaction-uniprot.ttl is older than output/tsv/reactome_reaction-uniprot.tsv -## Convert output/tsv/reactome_reaction-uniprot.tsv => output/ttl/reactome_reaction-uniprot.ttl -< 2023-11-27T16:28:03 reactome_reaction-uniprot -togoid-config config/reactome_reaction-uniprot convert -> 2023-11-27T16:28:09 reactome_reaction-uniprot -### Update TTL for refseq_protein-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/refseq_protein-uniprot.ttl is older than output/tsv/refseq_protein-uniprot.tsv -## Convert output/tsv/refseq_protein-uniprot.tsv => output/ttl/refseq_protein-uniprot.ttl -< 2023-11-27T16:28:09 refseq_protein-uniprot -togoid-config config/refseq_protein-uniprot convert -> 2023-11-27T17:33:22 refseq_protein-uniprot -### Update TTL for refseq_rna-dbsnp if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/refseq_rna-dbsnp.ttl is newer than output/tsv/refseq_rna-dbsnp.tsv -# => Preserving output/ttl/refseq_rna-dbsnp.ttl -### Update TTL for refseq_rna-hgnc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/refseq_rna-hgnc.ttl is newer than output/tsv/refseq_rna-hgnc.tsv -# => Preserving output/ttl/refseq_rna-hgnc.ttl -### Update TTL for refseq_rna-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/refseq_rna-ncbigene.ttl is newer than output/tsv/refseq_rna-ncbigene.tsv -# => Preserving output/ttl/refseq_rna-ncbigene.ttl -### Update TTL for refseq_rna-omim_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/refseq_rna-omim_gene.ttl is newer than output/tsv/refseq_rna-omim_gene.tsv -# => Preserving output/ttl/refseq_rna-omim_gene.ttl -### Update TTL for refseq_rna-pubmed if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/refseq_rna-pubmed.ttl is newer than output/tsv/refseq_rna-pubmed.tsv -# => Preserving output/ttl/refseq_rna-pubmed.ttl -### Update TTL for refseq_rna-refseq_protein if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/refseq_rna-refseq_protein.ttl is newer than output/tsv/refseq_rna-refseq_protein.tsv -# => Preserving output/ttl/refseq_rna-refseq_protein.ttl -### Update TTL for refseq_rna-taxonomy if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/refseq_rna-taxonomy.ttl is newer than output/tsv/refseq_rna-taxonomy.tsv -# => Preserving output/ttl/refseq_rna-taxonomy.ttl -### Update TTL for rhea-chebi if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/rhea-chebi.ttl is newer than output/tsv/rhea-chebi.tsv -# => Preserving output/ttl/rhea-chebi.ttl -### Update TTL for rhea-ec if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/rhea-ec.ttl is newer than output/tsv/rhea-ec.tsv -# => Preserving output/ttl/rhea-ec.ttl -### Update TTL for rhea-go if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/rhea-go.ttl is newer than output/tsv/rhea-go.tsv -# => Preserving output/ttl/rhea-go.ttl -### Update TTL for rhea-pubmed if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/rhea-pubmed.ttl is newer than output/tsv/rhea-pubmed.tsv -# => Preserving output/ttl/rhea-pubmed.ttl -### Update TTL for rhea-reactome_reaction if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/rhea-reactome_reaction.ttl is newer than output/tsv/rhea-reactome_reaction.tsv -# => Preserving output/ttl/rhea-reactome_reaction.ttl -### Update TTL for rhea-uniprot if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/rhea-uniprot.ttl is newer than output/tsv/rhea-uniprot.tsv -# => Preserving output/ttl/rhea-uniprot.ttl -### Update TTL for sra_accession-bioproject if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_accession-bioproject.ttl is older than output/tsv/sra_accession-bioproject.tsv -## Convert output/tsv/sra_accession-bioproject.tsv => output/ttl/sra_accession-bioproject.ttl -< 2023-11-27T17:33:22 sra_accession-bioproject -togoid-config config/sra_accession-bioproject convert -> 2023-11-27T17:33:27 sra_accession-bioproject -### Update TTL for sra_accession-biosample if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_accession-biosample.ttl is older than output/tsv/sra_accession-biosample.tsv -## Convert output/tsv/sra_accession-biosample.tsv => output/ttl/sra_accession-biosample.ttl -< 2023-11-27T17:33:27 sra_accession-biosample -togoid-config config/sra_accession-biosample convert -> 2023-11-27T17:37:57 sra_accession-biosample -### Update TTL for sra_accession-sra_analysis if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_accession-sra_analysis.ttl is older than output/tsv/sra_accession-sra_analysis.tsv -## Convert output/tsv/sra_accession-sra_analysis.tsv => output/ttl/sra_accession-sra_analysis.ttl -< 2023-11-27T17:37:57 sra_accession-sra_analysis -togoid-config config/sra_accession-sra_analysis convert -> 2023-11-27T17:38:00 sra_accession-sra_analysis -### Update TTL for sra_accession-sra_experiment if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_accession-sra_experiment.ttl is older than output/tsv/sra_accession-sra_experiment.tsv -## Convert output/tsv/sra_accession-sra_experiment.tsv => output/ttl/sra_accession-sra_experiment.ttl -< 2023-11-27T17:38:00 sra_accession-sra_experiment -togoid-config config/sra_accession-sra_experiment convert -> 2023-11-27T17:42:40 sra_accession-sra_experiment -### Update TTL for sra_accession-sra_project if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_accession-sra_project.ttl is older than output/tsv/sra_accession-sra_project.tsv -## Convert output/tsv/sra_accession-sra_project.tsv => output/ttl/sra_accession-sra_project.ttl -< 2023-11-27T17:42:40 sra_accession-sra_project -togoid-config config/sra_accession-sra_project convert -> 2023-11-27T17:42:45 sra_accession-sra_project -### Update TTL for sra_accession-sra_run if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_accession-sra_run.ttl is older than output/tsv/sra_accession-sra_run.tsv -## Convert output/tsv/sra_accession-sra_run.tsv => output/ttl/sra_accession-sra_run.ttl -< 2023-11-27T17:42:45 sra_accession-sra_run -togoid-config config/sra_accession-sra_run convert -> 2023-11-27T17:48:30 sra_accession-sra_run -### Update TTL for sra_accession-sra_sample if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_accession-sra_sample.ttl is older than output/tsv/sra_accession-sra_sample.tsv -## Convert output/tsv/sra_accession-sra_sample.tsv => output/ttl/sra_accession-sra_sample.ttl -< 2023-11-27T17:48:30 sra_accession-sra_sample -togoid-config config/sra_accession-sra_sample convert -> 2023-11-27T17:53:08 sra_accession-sra_sample -### Update TTL for sra_experiment-bioproject if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_experiment-bioproject.ttl is older than output/tsv/sra_experiment-bioproject.tsv -## Convert output/tsv/sra_experiment-bioproject.tsv => output/ttl/sra_experiment-bioproject.ttl -< 2023-11-27T17:53:08 sra_experiment-bioproject -togoid-config config/sra_experiment-bioproject convert -> 2023-11-27T17:57:10 sra_experiment-bioproject -### Update TTL for sra_experiment-biosample if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_experiment-biosample.ttl is older than output/tsv/sra_experiment-biosample.tsv -## Convert output/tsv/sra_experiment-biosample.tsv => output/ttl/sra_experiment-biosample.ttl -< 2023-11-27T17:57:10 sra_experiment-biosample -togoid-config config/sra_experiment-biosample convert -> 2023-11-27T18:01:50 sra_experiment-biosample -### Update TTL for sra_experiment-sra_project if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_experiment-sra_project.ttl is older than output/tsv/sra_experiment-sra_project.tsv -## Convert output/tsv/sra_experiment-sra_project.tsv => output/ttl/sra_experiment-sra_project.ttl -< 2023-11-27T18:01:50 sra_experiment-sra_project -togoid-config config/sra_experiment-sra_project convert -> 2023-11-27T18:06:18 sra_experiment-sra_project -### Update TTL for sra_experiment-sra_sample if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_experiment-sra_sample.ttl is older than output/tsv/sra_experiment-sra_sample.tsv -## Convert output/tsv/sra_experiment-sra_sample.tsv => output/ttl/sra_experiment-sra_sample.ttl -< 2023-11-27T18:06:18 sra_experiment-sra_sample -togoid-config config/sra_experiment-sra_sample convert -> 2023-11-27T18:09:58 sra_experiment-sra_sample -### Update TTL for sra_project-bioproject if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_project-bioproject.ttl is older than output/tsv/sra_project-bioproject.tsv -## Convert output/tsv/sra_project-bioproject.tsv => output/ttl/sra_project-bioproject.ttl -< 2023-11-27T18:09:58 sra_project-bioproject -togoid-config config/sra_project-bioproject convert -> 2023-11-27T18:10:03 sra_project-bioproject -### Update TTL for sra_run-bioproject if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_run-bioproject.ttl is older than output/tsv/sra_run-bioproject.tsv -## Convert output/tsv/sra_run-bioproject.tsv => output/ttl/sra_run-bioproject.ttl -< 2023-11-27T18:10:03 sra_run-bioproject -togoid-config config/sra_run-bioproject convert -> 2023-11-27T18:14:07 sra_run-bioproject -### Update TTL for sra_run-biosample if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_run-biosample.ttl is older than output/tsv/sra_run-biosample.tsv -## Convert output/tsv/sra_run-biosample.tsv => output/ttl/sra_run-biosample.ttl -< 2023-11-27T18:14:07 sra_run-biosample -togoid-config config/sra_run-biosample convert -> 2023-11-27T18:18:39 sra_run-biosample -### Update TTL for sra_run-sra_experiment if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_run-sra_experiment.ttl is older than output/tsv/sra_run-sra_experiment.tsv -## Convert output/tsv/sra_run-sra_experiment.tsv => output/ttl/sra_run-sra_experiment.ttl -< 2023-11-27T18:18:39 sra_run-sra_experiment -togoid-config config/sra_run-sra_experiment convert -> 2023-11-27T18:23:42 sra_run-sra_experiment -### Update TTL for sra_run-sra_project if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_run-sra_project.ttl is older than output/tsv/sra_run-sra_project.tsv -## Convert output/tsv/sra_run-sra_project.tsv => output/ttl/sra_run-sra_project.ttl -< 2023-11-27T18:23:42 sra_run-sra_project -togoid-config config/sra_run-sra_project convert -> 2023-11-27T18:28:05 sra_run-sra_project -### Update TTL for sra_run-sra_sample if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_run-sra_sample.ttl is older than output/tsv/sra_run-sra_sample.tsv -## Convert output/tsv/sra_run-sra_sample.tsv => output/ttl/sra_run-sra_sample.ttl -< 2023-11-27T18:28:05 sra_run-sra_sample -togoid-config config/sra_run-sra_sample convert -> 2023-11-27T18:32:14 sra_run-sra_sample -### Update TTL for sra_sample-biosample if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/sra_sample-biosample.ttl is older than output/tsv/sra_sample-biosample.tsv -## Convert output/tsv/sra_sample-biosample.tsv => output/ttl/sra_sample-biosample.ttl -< 2023-11-27T18:32:14 sra_sample-biosample -togoid-config config/sra_sample-biosample convert -> 2023-11-27T18:36:34 sra_sample-biosample -### Update TTL for swisslipids-chebi if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/swisslipids-chebi.ttl is older than output/tsv/swisslipids-chebi.tsv -## Convert output/tsv/swisslipids-chebi.tsv => output/ttl/swisslipids-chebi.ttl -< 2023-11-27T18:36:34 swisslipids-chebi -togoid-config config/swisslipids-chebi convert -> 2023-11-27T18:36:34 swisslipids-chebi -### Update TTL for swisslipids-hmdb if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/swisslipids-hmdb.ttl is older than output/tsv/swisslipids-hmdb.tsv -## Convert output/tsv/swisslipids-hmdb.tsv => output/ttl/swisslipids-hmdb.ttl -< 2023-11-27T18:36:34 swisslipids-hmdb -togoid-config config/swisslipids-hmdb convert -> 2023-11-27T18:36:35 swisslipids-hmdb -### Update TTL for swisslipids-inchi_key if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/swisslipids-inchi_key.ttl is older than output/tsv/swisslipids-inchi_key.tsv -## Convert output/tsv/swisslipids-inchi_key.tsv => output/ttl/swisslipids-inchi_key.ttl -< 2023-11-27T18:36:35 swisslipids-inchi_key -togoid-config config/swisslipids-inchi_key convert -> 2023-11-27T18:36:43 swisslipids-inchi_key -### Update TTL for taxonomy-pubmed if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/taxonomy-pubmed.ttl is older than output/tsv/taxonomy-pubmed.tsv -## Convert output/tsv/taxonomy-pubmed.tsv => output/ttl/taxonomy-pubmed.ttl -< 2023-11-27T18:36:43 taxonomy-pubmed -togoid-config config/taxonomy-pubmed convert -> 2023-11-27T18:36:44 taxonomy-pubmed -### Update TTL for togovar-clinvar if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/togovar-clinvar.ttl is newer than output/tsv/togovar-clinvar.tsv -# => Preserving output/ttl/togovar-clinvar.ttl -### Update TTL for togovar-dbsnp if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/togovar-dbsnp.ttl is older than output/tsv/togovar-dbsnp.tsv -## Convert output/tsv/togovar-dbsnp.tsv => output/ttl/togovar-dbsnp.ttl -< 2023-11-27T18:36:44 togovar-dbsnp -togoid-config config/togovar-dbsnp convert -> 2023-11-27T18:51:51 togovar-dbsnp -### Update TTL for togovar-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/togovar-ensembl_gene.ttl is older than output/tsv/togovar-ensembl_gene.tsv -## Convert output/tsv/togovar-ensembl_gene.tsv => output/ttl/togovar-ensembl_gene.ttl -< 2023-11-27T18:51:51 togovar-ensembl_gene -togoid-config config/togovar-ensembl_gene convert -> 2023-11-27T19:10:27 togovar-ensembl_gene -### Update TTL for togovar-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/togovar-ensembl_transcript.ttl is older than output/tsv/togovar-ensembl_transcript.tsv -## Convert output/tsv/togovar-ensembl_transcript.tsv => output/ttl/togovar-ensembl_transcript.ttl -< 2023-11-27T19:10:27 togovar-ensembl_transcript -togoid-config config/togovar-ensembl_transcript convert -> 2023-11-27T21:51:45 togovar-ensembl_transcript -### Update TTL for togovar-hgnc if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/togovar-hgnc.ttl is older than output/tsv/togovar-hgnc.tsv -## Convert output/tsv/togovar-hgnc.tsv => output/ttl/togovar-hgnc.ttl -< 2023-11-27T21:51:45 togovar-hgnc -togoid-config config/togovar-hgnc convert -> 2023-11-27T22:01:08 togovar-hgnc -### Update TTL for togovar-ncbigene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/togovar-ncbigene.ttl is older than output/tsv/togovar-ncbigene.tsv -## Convert output/tsv/togovar-ncbigene.tsv => output/ttl/togovar-ncbigene.ttl -< 2023-11-27T22:01:08 togovar-ncbigene -togoid-config config/togovar-ncbigene convert -> 2023-11-27T22:10:27 togovar-ncbigene -### Update TTL for togovar-pubmed if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/togovar-pubmed.ttl is older than output/tsv/togovar-pubmed.tsv -## Convert output/tsv/togovar-pubmed.tsv => output/ttl/togovar-pubmed.ttl -< 2023-11-27T22:10:27 togovar-pubmed -togoid-config config/togovar-pubmed convert -> 2023-11-27T22:10:32 togovar-pubmed -### Update TTL for togovar-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/togovar-refseq_rna.ttl is older than output/tsv/togovar-refseq_rna.tsv -## Convert output/tsv/togovar-refseq_rna.tsv => output/ttl/togovar-refseq_rna.ttl -< 2023-11-27T22:10:32 togovar-refseq_rna -togoid-config config/togovar-refseq_rna convert -> 2023-11-27T22:56:24 togovar-refseq_rna -### Update TTL for uberon-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/uberon-ncit_tissue.ttl is older than output/tsv/uberon-ncit_tissue.tsv -## Convert output/tsv/uberon-ncit_tissue.tsv => output/ttl/uberon-ncit_tissue.ttl -< 2023-11-27T22:56:24 uberon-ncit_tissue -togoid-config config/uberon-ncit_tissue convert -> 2023-11-27T22:56:26 uberon-ncit_tissue -### Update TTL for uniprot-chembl_target if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-chembl_target.ttl is newer than output/tsv/uniprot-chembl_target.tsv -# => Preserving output/ttl/uniprot-chembl_target.ttl -### Update TTL for uniprot-dbsnp if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-dbsnp.ttl is newer than output/tsv/uniprot-dbsnp.tsv -# => Preserving output/ttl/uniprot-dbsnp.ttl -### Update TTL for uniprot-ec if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-ec.ttl is newer than output/tsv/uniprot-ec.tsv -# => Preserving output/ttl/uniprot-ec.ttl -### Update TTL for uniprot-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-ensembl_gene.ttl is newer than output/tsv/uniprot-ensembl_gene.tsv -# => Preserving output/ttl/uniprot-ensembl_gene.ttl -### Update TTL for uniprot-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-ensembl_protein.ttl is newer than output/tsv/uniprot-ensembl_protein.tsv -# => Preserving output/ttl/uniprot-ensembl_protein.ttl -### Update TTL for uniprot-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-ensembl_transcript.ttl is newer than output/tsv/uniprot-ensembl_transcript.tsv -# => Preserving output/ttl/uniprot-ensembl_transcript.ttl -### Update TTL for uniprot-go if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-go.ttl is newer than output/tsv/uniprot-go.tsv -# => Preserving output/ttl/uniprot-go.ttl -### Update TTL for uniprot-hgnc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-hgnc.ttl is newer than output/tsv/uniprot-hgnc.tsv -# => Preserving output/ttl/uniprot-hgnc.ttl -### Update TTL for uniprot-insdc if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-insdc.ttl is newer than output/tsv/uniprot-insdc.tsv -# => Preserving output/ttl/uniprot-insdc.ttl -### Update TTL for uniprot-intact if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-intact.ttl is newer than output/tsv/uniprot-intact.tsv -# => Preserving output/ttl/uniprot-intact.ttl -### Update TTL for uniprot-ncbigene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-ncbigene.ttl is newer than output/tsv/uniprot-ncbigene.tsv -# => Preserving output/ttl/uniprot-ncbigene.ttl -### Update TTL for uniprot-oma_group if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-oma_group.ttl is newer than output/tsv/uniprot-oma_group.tsv -# => Preserving output/ttl/uniprot-oma_group.ttl -### Update TTL for uniprot-omim_gene if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-omim_gene.ttl is newer than output/tsv/uniprot-omim_gene.tsv -# => Preserving output/ttl/uniprot-omim_gene.ttl -### Update TTL for uniprot-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-omim_phenotype.ttl is newer than output/tsv/uniprot-omim_phenotype.tsv -# => Preserving output/ttl/uniprot-omim_phenotype.ttl -### Update TTL for uniprot-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-orphanet_phenotype.ttl is newer than output/tsv/uniprot-orphanet_phenotype.tsv -# => Preserving output/ttl/uniprot-orphanet_phenotype.ttl -### Update TTL for uniprot-pdb if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-pdb.ttl is newer than output/tsv/uniprot-pdb.tsv -# => Preserving output/ttl/uniprot-pdb.ttl -### Update TTL for uniprot-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-reactome_pathway.ttl is newer than output/tsv/uniprot-reactome_pathway.tsv -# => Preserving output/ttl/uniprot-reactome_pathway.ttl -### Update TTL for uniprot-refseq_protein if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-refseq_protein.ttl is newer than output/tsv/uniprot-refseq_protein.tsv -# => Preserving output/ttl/uniprot-refseq_protein.ttl -### Update TTL for uniprot-uniprot_mnemonic if check_ttl_filesize false or check_ttl_timestamp false -# File output/ttl/uniprot-uniprot_mnemonic.ttl is newer than output/tsv/uniprot-uniprot_mnemonic.tsv -# => Preserving output/ttl/uniprot-uniprot_mnemonic.ttl -### Update TTL for uniprot_reference_proteome-assembly_insdc if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/uniprot_reference_proteome-assembly_insdc.ttl is older than output/tsv/uniprot_reference_proteome-assembly_insdc.tsv -## Convert output/tsv/uniprot_reference_proteome-assembly_insdc.tsv => output/ttl/uniprot_reference_proteome-assembly_insdc.ttl -< 2023-11-27T22:56:30 uniprot_reference_proteome-assembly_insdc -togoid-config config/uniprot_reference_proteome-assembly_insdc convert -> 2023-11-27T22:56:45 uniprot_reference_proteome-assembly_insdc -### Update TTL for uniprot_reference_proteome-assembly_refseq if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/uniprot_reference_proteome-assembly_refseq.ttl is older than output/tsv/uniprot_reference_proteome-assembly_refseq.tsv -## Convert output/tsv/uniprot_reference_proteome-assembly_refseq.tsv => output/ttl/uniprot_reference_proteome-assembly_refseq.ttl -< 2023-11-27T22:56:45 uniprot_reference_proteome-assembly_refseq -togoid-config config/uniprot_reference_proteome-assembly_refseq convert -> 2023-11-27T22:56:46 uniprot_reference_proteome-assembly_refseq -### Update TTL for uniprot_reference_proteome-taxonomy if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/uniprot_reference_proteome-taxonomy.ttl is older than output/tsv/uniprot_reference_proteome-taxonomy.tsv -## Convert output/tsv/uniprot_reference_proteome-taxonomy.tsv => output/ttl/uniprot_reference_proteome-taxonomy.ttl -< 2023-11-27T22:56:46 uniprot_reference_proteome-taxonomy -togoid-config config/uniprot_reference_proteome-taxonomy convert -> 2023-11-27T22:57:01 uniprot_reference_proteome-taxonomy -### Update TTL for wikipathways-chebi if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/wikipathways-chebi.ttl is older than output/tsv/wikipathways-chebi.tsv -## Convert output/tsv/wikipathways-chebi.tsv => output/ttl/wikipathways-chebi.ttl -< 2023-11-27T22:57:01 wikipathways-chebi -togoid-config config/wikipathways-chebi convert -> 2023-11-27T22:57:03 wikipathways-chebi -### Update TTL for wikipathways-doid if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/wikipathways-doid.ttl is older than output/tsv/wikipathways-doid.tsv -## Convert output/tsv/wikipathways-doid.tsv => output/ttl/wikipathways-doid.ttl -< 2023-11-27T22:57:03 wikipathways-doid -togoid-config config/wikipathways-doid convert -> 2023-11-27T22:57:05 wikipathways-doid -### Update TTL for wikipathways-hmdb if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/wikipathways-hmdb.ttl is older than output/tsv/wikipathways-hmdb.tsv -## Convert output/tsv/wikipathways-hmdb.tsv => output/ttl/wikipathways-hmdb.ttl -< 2023-11-27T22:57:05 wikipathways-hmdb -togoid-config config/wikipathways-hmdb convert -> 2023-11-27T22:57:06 wikipathways-hmdb -### Update TTL for wikipathways-lipidmaps if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/wikipathways-lipidmaps.ttl is older than output/tsv/wikipathways-lipidmaps.tsv -## Convert output/tsv/wikipathways-lipidmaps.tsv => output/ttl/wikipathways-lipidmaps.ttl -< 2023-11-27T22:57:06 wikipathways-lipidmaps -togoid-config config/wikipathways-lipidmaps convert -> 2023-11-27T22:57:07 wikipathways-lipidmaps -### Update TTL for wikipathways-ncbigene if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/wikipathways-ncbigene.ttl is older than output/tsv/wikipathways-ncbigene.tsv -## Convert output/tsv/wikipathways-ncbigene.tsv => output/ttl/wikipathways-ncbigene.ttl -< 2023-11-27T22:57:07 wikipathways-ncbigene -togoid-config config/wikipathways-ncbigene convert -> 2023-11-27T22:57:09 wikipathways-ncbigene -### Update TTL for wikipathways-uniprot if check_ttl_filesize false or check_ttl_timestamp true -# File output/ttl/wikipathways-uniprot.ttl is older than output/tsv/wikipathways-uniprot.tsv -## Convert output/tsv/wikipathways-uniprot.tsv => output/ttl/wikipathways-uniprot.ttl -< 2023-11-27T22:57:09 wikipathways-uniprot -togoid-config config/wikipathways-uniprot convert -> 2023-11-27T22:57:11 wikipathways-uniprot -Rule for TTL (output/ttl/affy_probeset-ncbigene.ttl) ------------------------------- -Investigating output/ttl/affy_probeset-ncbigene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 03:55:42 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/affy_probeset-ncbigene.tsv (2023-11-18 00:12:45 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/assembly_insdc-bioproject.ttl) ------------------------------- -Investigating output/ttl/assembly_insdc-bioproject.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 03:55:58 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/assembly_insdc-bioproject.tsv (2023-11-18 00:12:49 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/assembly_insdc-biosample.ttl) ------------------------------- -Investigating output/ttl/assembly_insdc-biosample.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 03:56:16 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/assembly_insdc-biosample.tsv (2023-11-18 00:12:51 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/assembly_insdc-insdc_master.ttl) ------------------------------- -Investigating output/ttl/assembly_insdc-insdc_master.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 03:56:32 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/assembly_insdc-insdc_master.tsv (2023-11-18 00:12:53 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/bioproject-biosample.ttl) ------------------------------- -Investigating output/ttl/bioproject-biosample.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 03:56:52 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/bioproject-biosample.tsv (2023-11-18 00:12:55 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/bioproject-geo_series.ttl) ------------------------------- -Investigating output/ttl/bioproject-geo_series.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:01:51 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/bioproject-geo_series.tsv (2023-11-27 10:51:37 +0900) -latest-prerequisite time: 2023-11-27 10:51:37 +0900 -................................ - -Rule for TTL (output/ttl/bioproject-pubmed.ttl) ------------------------------- -Investigating output/ttl/bioproject-pubmed.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:01:53 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/bioproject-pubmed.tsv (2023-11-27 10:51:38 +0900) -latest-prerequisite time: 2023-11-27 10:51:38 +0900 -................................ - -Rule for TTL (output/ttl/bioproject_umbrella-bioproject.ttl) ------------------------------- -Investigating output/ttl/bioproject_umbrella-bioproject.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 03:56:58 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/bioproject_umbrella-bioproject.tsv (2023-11-18 00:12:59 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/biosample-bioproject.ttl) ------------------------------- -Investigating output/ttl/biosample-bioproject.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 03:57:18 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/biosample-bioproject.tsv (2023-11-18 00:13:02 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/cellosaurus-ncit_disease.ttl) ------------------------------- -Investigating output/ttl/cellosaurus-ncit_disease.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-10-06 20:59:11 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/cellosaurus-ncit_disease.tsv (2023-10-06 17:40:53 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/cellosaurus-orphanet_phenotype.ttl) ------------------------------- -Investigating output/ttl/cellosaurus-orphanet_phenotype.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-10-06 20:59:12 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/cellosaurus-orphanet_phenotype.tsv (2023-10-06 17:40:56 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/chembl_target-ensembl_gene.ttl) ------------------------------- -Investigating output/ttl/chembl_target-ensembl_gene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-08-25 22:09:29 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/chembl_target-ensembl_gene.tsv (2023-08-25 17:59:01 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/cog-insdc.ttl) ------------------------------- -Investigating output/ttl/cog-insdc.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-07-28 22:03:15 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/cog-insdc.tsv (2023-07-28 17:55:29 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/cog-refseq_protein.ttl) ------------------------------- -Investigating output/ttl/cog-refseq_protein.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-07-28 22:03:44 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/cog-refseq_protein.tsv (2023-07-28 17:55:40 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_gene-affy_probeset.ttl) ------------------------------- -Investigating output/ttl/ensembl_gene-affy_probeset.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:03:30 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ensembl_gene-affy_probeset.tsv (2023-11-24 18:42:51 +0900) -latest-prerequisite time: 2023-11-24 18:42:51 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_gene-ensembl_protein.ttl) ------------------------------- -Investigating output/ttl/ensembl_gene-ensembl_protein.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:05:23 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ensembl_gene-ensembl_protein.tsv (2023-11-24 18:54:52 +0900) -latest-prerequisite time: 2023-11-24 18:54:52 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_gene-ensembl_transcript.ttl) ------------------------------- -Investigating output/ttl/ensembl_gene-ensembl_transcript.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:07:50 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ensembl_gene-ensembl_transcript.tsv (2023-11-24 19:06:59 +0900) -latest-prerequisite time: 2023-11-24 19:06:59 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_gene-hgnc.ttl) ------------------------------- -Investigating output/ttl/ensembl_gene-hgnc.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:07:51 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ensembl_gene-hgnc.tsv (2023-11-24 19:07:01 +0900) -latest-prerequisite time: 2023-11-24 19:07:01 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_gene-ncbigene.ttl) ------------------------------- -Investigating output/ttl/ensembl_gene-ncbigene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:08:47 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ensembl_gene-ncbigene.tsv (2023-11-24 19:12:22 +0900) -latest-prerequisite time: 2023-11-24 19:12:22 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_gene-uniprot.ttl) ------------------------------- -Investigating output/ttl/ensembl_gene-uniprot.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:09:27 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ensembl_gene-uniprot.tsv (2023-11-24 19:23:49 +0900) -latest-prerequisite time: 2023-11-24 19:23:49 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_protein-ensembl_transcript.ttl) ------------------------------- -Investigating output/ttl/ensembl_protein-ensembl_transcript.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:07:12 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/ensembl_protein-ensembl_transcript.tsv (2023-11-18 00:39:42 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_transcript-affy_probeset.ttl) ------------------------------- -Investigating output/ttl/ensembl_transcript-affy_probeset.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:07:15 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/ensembl_transcript-affy_probeset.tsv (2023-11-18 00:43:12 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_transcript-go.ttl) ------------------------------- -Investigating output/ttl/ensembl_transcript-go.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 14:09:28 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ensembl_transcript-go.tsv (2023-11-24 21:14:09 +0900) -latest-prerequisite time: 2023-11-24 21:14:09 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_transcript-hgnc.ttl) ------------------------------- -Investigating output/ttl/ensembl_transcript-hgnc.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:18:23 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/ensembl_transcript-hgnc.tsv (2023-11-18 00:47:04 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/ensembl_transcript-refseq_rna.ttl) ------------------------------- -Investigating output/ttl/ensembl_transcript-refseq_rna.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:50 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/ensembl_transcript-refseq_rna.tsv (2023-11-18 00:48:35 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/gea-bioproject.ttl) ------------------------------- -Investigating output/ttl/gea-bioproject.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:50 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/gea-bioproject.tsv (2023-11-18 00:48:35 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/gea-biosample.ttl) ------------------------------- -Investigating output/ttl/gea-biosample.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:51 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/gea-biosample.tsv (2023-11-18 00:48:36 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-ccds.ttl) ------------------------------- -Investigating output/ttl/hgnc-ccds.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:52 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-ccds.tsv (2023-11-18 00:48:45 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-ec.ttl) ------------------------------- -Investigating output/ttl/hgnc-ec.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:52 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-ec.tsv (2023-11-18 00:48:45 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-ensembl_gene.ttl) ------------------------------- -Investigating output/ttl/hgnc-ensembl_gene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:53 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-ensembl_gene.tsv (2023-11-18 00:48:46 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-hgnc_symbol.ttl) ------------------------------- -Investigating output/ttl/hgnc-hgnc_symbol.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:53 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-hgnc_symbol.tsv (2023-11-18 00:48:46 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-insdc.ttl) ------------------------------- -Investigating output/ttl/hgnc-insdc.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:54 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-insdc.tsv (2023-11-18 00:48:47 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-lrg.ttl) ------------------------------- -Investigating output/ttl/hgnc-lrg.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:54 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-lrg.tsv (2023-11-18 00:48:47 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-mgi_gene.ttl) ------------------------------- -Investigating output/ttl/hgnc-mgi_gene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:54 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-mgi_gene.tsv (2023-11-18 00:48:48 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-mirbase.ttl) ------------------------------- -Investigating output/ttl/hgnc-mirbase.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:55 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-mirbase.tsv (2023-11-18 00:48:48 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-ncbigene.ttl) ------------------------------- -Investigating output/ttl/hgnc-ncbigene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:55 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-ncbigene.tsv (2023-11-18 00:48:49 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-omim_gene.ttl) ------------------------------- -Investigating output/ttl/hgnc-omim_gene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:55 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-omim_gene.tsv (2023-11-18 00:48:49 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-pubmed.ttl) ------------------------------- -Investigating output/ttl/hgnc-pubmed.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:56 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-pubmed.tsv (2023-11-18 00:48:50 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-refseq_rna.ttl) ------------------------------- -Investigating output/ttl/hgnc-refseq_rna.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:56 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-refseq_rna.tsv (2023-11-18 00:48:50 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-rgd.ttl) ------------------------------- -Investigating output/ttl/hgnc-rgd.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:57 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-rgd.tsv (2023-11-18 00:48:51 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hgnc-uniprot.ttl) ------------------------------- -Investigating output/ttl/hgnc-uniprot.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:57 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hgnc-uniprot.tsv (2023-11-18 00:48:51 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hmdb-chebi.ttl) ------------------------------- -Investigating output/ttl/hmdb-chebi.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-07-08 10:23:14 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hmdb-chebi.tsv (2023-07-03 13:03:28 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hmdb-inchi_key.ttl) ------------------------------- -Investigating output/ttl/hmdb-inchi_key.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-07-08 10:23:16 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hmdb-inchi_key.tsv (2023-07-03 13:03:51 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hmdb-pdb_ccd.ttl) ------------------------------- -Investigating output/ttl/hmdb-pdb_ccd.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-07-08 10:23:16 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hmdb-pdb_ccd.tsv (2023-07-03 13:06:37 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hmdb-pubchem_compound.ttl) ------------------------------- -Investigating output/ttl/hmdb-pubchem_compound.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-07-08 10:23:17 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hmdb-pubchem_compound.tsv (2023-07-03 13:06:27 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/homologene-ncbigene.ttl) ------------------------------- -Investigating output/ttl/homologene-ncbigene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-06-02 20:54:15 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/homologene-ncbigene.tsv (2023-06-02 19:58:16 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hp_inheritance-omim_phenotype.ttl) ------------------------------- -Investigating output/ttl/hp_inheritance-omim_phenotype.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:19:58 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hp_inheritance-omim_phenotype.tsv (2023-11-18 00:48:52 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hp_phenotype-omim_phenotype.ttl) ------------------------------- -Investigating output/ttl/hp_phenotype-omim_phenotype.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-10-20 21:56:05 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hp_phenotype-omim_phenotype.tsv (2023-10-16 09:24:24 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/hp_phenotype-orphanet_phenotype.ttl) ------------------------------- -Investigating output/ttl/hp_phenotype-orphanet_phenotype.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-10-13 21:27:24 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/hp_phenotype-orphanet_phenotype.tsv (2023-10-13 18:16:38 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/insdc-bioproject.ttl) ------------------------------- -Investigating output/ttl/insdc-bioproject.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 04:29:03 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/insdc-bioproject.tsv (2023-11-18 00:49:15 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/insdc-biosample.ttl) ------------------------------- -Investigating output/ttl/insdc-biosample.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 05:07:14 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/insdc-biosample.tsv (2023-11-18 00:50:34 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/insdc_master-bioproject.ttl) ------------------------------- -Investigating output/ttl/insdc_master-bioproject.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 05:07:32 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/insdc_master-bioproject.tsv (2023-11-18 00:50:35 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/insdc_master-biosample.ttl) ------------------------------- -Investigating output/ttl/insdc_master-biosample.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-18 05:07:45 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/insdc_master-biosample.tsv (2023-11-18 00:50:37 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-go.ttl) ------------------------------- -Investigating output/ttl/interpro-go.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 04:43:48 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-go.tsv (2023-11-12 10:20:00 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-pdb.ttl) ------------------------------- -Investigating output/ttl/interpro-pdb.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 04:43:58 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-pdb.tsv (2023-11-12 10:20:03 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-pfam.ttl) ------------------------------- -Investigating output/ttl/interpro-pfam.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 04:43:59 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-pfam.tsv (2023-11-12 10:20:04 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-prosite.ttl) ------------------------------- -Investigating output/ttl/interpro-prosite.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 04:43:59 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-prosite.tsv (2023-11-12 10:20:06 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-pubmed.ttl) ------------------------------- -Investigating output/ttl/interpro-pubmed.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 04:44:00 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-pubmed.tsv (2023-11-12 10:20:08 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-reactome_pathway.ttl) ------------------------------- -Investigating output/ttl/interpro-reactome_pathway.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 04:44:05 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-reactome_pathway.tsv (2023-11-12 10:20:10 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-smart.ttl) ------------------------------- -Investigating output/ttl/interpro-smart.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 04:44:05 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-smart.tsv (2023-11-12 10:20:11 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/interpro-uniprot.ttl) ------------------------------- -Investigating output/ttl/interpro-uniprot.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-13 09:02:47 +0900 -pre-requisites: ---output/ttl/ () ---output/tsv/interpro-uniprot.tsv (2023-11-12 14:10:18 +0900) ---config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 -................................ - -Rule for TTL (output/ttl/jga_study-jga_dataset.ttl) +--prepare:uniprot (2023-12-02 02:54:22 +0900) +latest-prerequisite time: 2023-12-02 02:54:22 +0900 +................................ + +### Update TTL for affy_probeset-ncbigene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/affy_probeset-ncbigene.ttl is older than output/tsv/affy_probeset-ncbigene.tsv +## Convert output/tsv/affy_probeset-ncbigene.tsv => output/ttl/affy_probeset-ncbigene.ttl +< 2023-12-02T02:54:22 affy_probeset-ncbigene +togoid-config config/affy_probeset-ncbigene convert +> 2023-12-02T02:54:23 affy_probeset-ncbigene +### Update TTL for assembly_insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/assembly_insdc-bioproject.ttl is older than output/tsv/assembly_insdc-bioproject.tsv +## Convert output/tsv/assembly_insdc-bioproject.tsv => output/ttl/assembly_insdc-bioproject.ttl +< 2023-12-02T02:54:23 assembly_insdc-bioproject +togoid-config config/assembly_insdc-bioproject convert +> 2023-12-02T02:54:41 assembly_insdc-bioproject +### Update TTL for assembly_insdc-biosample if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/assembly_insdc-biosample.ttl is older than output/tsv/assembly_insdc-biosample.tsv +## Convert output/tsv/assembly_insdc-biosample.tsv => output/ttl/assembly_insdc-biosample.ttl +< 2023-12-02T02:54:41 assembly_insdc-biosample +togoid-config config/assembly_insdc-biosample convert +> 2023-12-02T02:54:57 assembly_insdc-biosample +### Update TTL for assembly_insdc-insdc_master if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/assembly_insdc-insdc_master.ttl is older than output/tsv/assembly_insdc-insdc_master.tsv +## Convert output/tsv/assembly_insdc-insdc_master.tsv => output/ttl/assembly_insdc-insdc_master.ttl +< 2023-12-02T02:54:57 assembly_insdc-insdc_master +togoid-config config/assembly_insdc-insdc_master convert +> 2023-12-02T02:55:15 assembly_insdc-insdc_master +### Update TTL for bioproject-biosample if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/bioproject-biosample.ttl is older than output/tsv/bioproject-biosample.tsv +## Convert output/tsv/bioproject-biosample.tsv => output/ttl/bioproject-biosample.ttl +< 2023-12-02T02:55:15 bioproject-biosample +togoid-config config/bioproject-biosample convert +> 2023-12-02T02:55:34 bioproject-biosample +### Update TTL for bioproject-geo_series if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/bioproject-geo_series.ttl is older than output/tsv/bioproject-geo_series.tsv +## Convert output/tsv/bioproject-geo_series.tsv => output/ttl/bioproject-geo_series.ttl +< 2023-12-02T02:55:34 bioproject-geo_series +togoid-config config/bioproject-geo_series convert +> 2023-12-02T02:55:36 bioproject-geo_series +### Update TTL for bioproject-pubmed if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/bioproject-pubmed.ttl is older than output/tsv/bioproject-pubmed.tsv +## Convert output/tsv/bioproject-pubmed.tsv => output/ttl/bioproject-pubmed.ttl +< 2023-12-02T02:55:36 bioproject-pubmed +togoid-config config/bioproject-pubmed convert +> 2023-12-02T02:55:39 bioproject-pubmed +### Update TTL for bioproject_umbrella-bioproject if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/bioproject_umbrella-bioproject.ttl is older than output/tsv/bioproject_umbrella-bioproject.tsv +## Convert output/tsv/bioproject_umbrella-bioproject.tsv => output/ttl/bioproject_umbrella-bioproject.ttl +< 2023-12-02T02:55:39 bioproject_umbrella-bioproject +togoid-config config/bioproject_umbrella-bioproject convert +> 2023-12-02T02:55:40 bioproject_umbrella-bioproject +### Update TTL for biosample-bioproject if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/biosample-bioproject.ttl is older than output/tsv/biosample-bioproject.tsv +## Convert output/tsv/biosample-bioproject.tsv => output/ttl/biosample-bioproject.ttl +< 2023-12-02T02:55:40 biosample-bioproject +togoid-config config/biosample-bioproject convert +> 2023-12-02T02:56:00 biosample-bioproject +### Update TTL for cellosaurus-ncit_disease if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/cellosaurus-ncit_disease.ttl is newer than output/tsv/cellosaurus-ncit_disease.tsv +# => Preserving output/ttl/cellosaurus-ncit_disease.ttl +### Update TTL for cellosaurus-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/cellosaurus-orphanet_phenotype.ttl is newer than output/tsv/cellosaurus-orphanet_phenotype.tsv +# => Preserving output/ttl/cellosaurus-orphanet_phenotype.ttl +### Update TTL for chebi-inchi_key if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chebi-inchi_key.ttl is older than output/tsv/chebi-inchi_key.tsv +## Convert output/tsv/chebi-inchi_key.tsv => output/ttl/chebi-inchi_key.ttl +< 2023-12-02T02:56:00 chebi-inchi_key +togoid-config config/chebi-inchi_key convert +> 2023-12-02T02:56:01 chebi-inchi_key +### Update TTL for chembl_compound-chebi if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-chebi.ttl is older than output/tsv/chembl_compound-chebi.tsv +## Convert output/tsv/chembl_compound-chebi.tsv => output/ttl/chembl_compound-chebi.ttl +< 2023-12-02T02:56:01 chembl_compound-chebi +togoid-config config/chembl_compound-chebi convert +> 2023-12-02T02:56:02 chembl_compound-chebi +### Update TTL for chembl_compound-chembl_target if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-chembl_target.ttl is older than output/tsv/chembl_compound-chembl_target.tsv +## Convert output/tsv/chembl_compound-chembl_target.tsv => output/ttl/chembl_compound-chembl_target.ttl +< 2023-12-02T02:56:02 chembl_compound-chembl_target +togoid-config config/chembl_compound-chembl_target convert +> 2023-12-02T02:56:32 chembl_compound-chembl_target +### Update TTL for chembl_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-drugbank.ttl is older than output/tsv/chembl_compound-drugbank.tsv +## Convert output/tsv/chembl_compound-drugbank.tsv => output/ttl/chembl_compound-drugbank.ttl +< 2023-12-02T02:56:32 chembl_compound-drugbank +togoid-config config/chembl_compound-drugbank convert +> 2023-12-02T02:56:32 chembl_compound-drugbank +### Update TTL for chembl_compound-hmdb if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-hmdb.ttl is older than output/tsv/chembl_compound-hmdb.tsv +## Convert output/tsv/chembl_compound-hmdb.tsv => output/ttl/chembl_compound-hmdb.ttl +< 2023-12-02T02:56:32 chembl_compound-hmdb +togoid-config config/chembl_compound-hmdb convert +> 2023-12-02T02:56:33 chembl_compound-hmdb +### Update TTL for chembl_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-inchi_key.ttl is older than output/tsv/chembl_compound-inchi_key.tsv +## Convert output/tsv/chembl_compound-inchi_key.tsv => output/ttl/chembl_compound-inchi_key.ttl +< 2023-12-02T02:56:33 chembl_compound-inchi_key +togoid-config config/chembl_compound-inchi_key convert +> 2023-12-02T02:56:50 chembl_compound-inchi_key +### Update TTL for chembl_compound-mesh if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-mesh.ttl is older than output/tsv/chembl_compound-mesh.tsv +## Convert output/tsv/chembl_compound-mesh.tsv => output/ttl/chembl_compound-mesh.ttl +< 2023-12-02T02:56:50 chembl_compound-mesh +togoid-config config/chembl_compound-mesh convert +> 2023-12-02T02:56:51 chembl_compound-mesh +### Update TTL for chembl_compound-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-pdb_ccd.ttl is older than output/tsv/chembl_compound-pdb_ccd.tsv +## Convert output/tsv/chembl_compound-pdb_ccd.tsv => output/ttl/chembl_compound-pdb_ccd.ttl +< 2023-12-02T02:56:51 chembl_compound-pdb_ccd +togoid-config config/chembl_compound-pdb_ccd convert +> 2023-12-02T02:56:51 chembl_compound-pdb_ccd +### Update TTL for chembl_compound-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-pubchem_compound.ttl is older than output/tsv/chembl_compound-pubchem_compound.tsv +## Convert output/tsv/chembl_compound-pubchem_compound.tsv => output/ttl/chembl_compound-pubchem_compound.ttl +< 2023-12-02T02:56:51 chembl_compound-pubchem_compound +togoid-config config/chembl_compound-pubchem_compound convert +> 2023-12-02T02:57:08 chembl_compound-pubchem_compound +### Update TTL for chembl_compound-pubchem_substance if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-pubchem_substance.ttl is older than output/tsv/chembl_compound-pubchem_substance.tsv +## Convert output/tsv/chembl_compound-pubchem_substance.tsv => output/ttl/chembl_compound-pubchem_substance.ttl +< 2023-12-02T02:57:08 chembl_compound-pubchem_substance +togoid-config config/chembl_compound-pubchem_substance convert +> 2023-12-02T02:57:13 chembl_compound-pubchem_substance +### Update TTL for chembl_compound-pubmed if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_compound-pubmed.ttl is older than output/tsv/chembl_compound-pubmed.tsv +## Convert output/tsv/chembl_compound-pubmed.tsv => output/ttl/chembl_compound-pubmed.ttl +< 2023-12-02T02:57:13 chembl_compound-pubmed +togoid-config config/chembl_compound-pubmed convert +> 2023-12-02T02:57:25 chembl_compound-pubmed +### Update TTL for chembl_target-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/chembl_target-ensembl_gene.ttl is newer than output/tsv/chembl_target-ensembl_gene.tsv +# => Preserving output/ttl/chembl_target-ensembl_gene.ttl +### Update TTL for chembl_target-go if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_target-go.ttl is older than output/tsv/chembl_target-go.tsv +## Convert output/tsv/chembl_target-go.tsv => output/ttl/chembl_target-go.ttl +< 2023-12-02T02:57:25 chembl_target-go +togoid-config config/chembl_target-go convert +> 2023-12-02T02:57:25 chembl_target-go +### Update TTL for chembl_target-interpro if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_target-interpro.ttl is older than output/tsv/chembl_target-interpro.tsv +## Convert output/tsv/chembl_target-interpro.tsv => output/ttl/chembl_target-interpro.ttl +< 2023-12-02T02:57:25 chembl_target-interpro +togoid-config config/chembl_target-interpro convert +> 2023-12-02T02:57:26 chembl_target-interpro +### Update TTL for chembl_target-pdb if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_target-pdb.ttl is older than output/tsv/chembl_target-pdb.tsv +## Convert output/tsv/chembl_target-pdb.tsv => output/ttl/chembl_target-pdb.ttl +< 2023-12-02T02:57:26 chembl_target-pdb +togoid-config config/chembl_target-pdb convert +> 2023-12-02T02:57:26 chembl_target-pdb +### Update TTL for chembl_target-pfam if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_target-pfam.ttl is older than output/tsv/chembl_target-pfam.tsv +## Convert output/tsv/chembl_target-pfam.tsv => output/ttl/chembl_target-pfam.ttl +< 2023-12-02T02:57:26 chembl_target-pfam +togoid-config config/chembl_target-pfam convert +> 2023-12-02T02:57:26 chembl_target-pfam +### Update TTL for chembl_target-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_target-reactome_pathway.ttl is older than output/tsv/chembl_target-reactome_pathway.tsv +## Convert output/tsv/chembl_target-reactome_pathway.tsv => output/ttl/chembl_target-reactome_pathway.ttl +< 2023-12-02T02:57:26 chembl_target-reactome_pathway +togoid-config config/chembl_target-reactome_pathway convert +> 2023-12-02T02:57:27 chembl_target-reactome_pathway +### Update TTL for chembl_target-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/chembl_target-uniprot.ttl is older than output/tsv/chembl_target-uniprot.tsv +## Convert output/tsv/chembl_target-uniprot.tsv => output/ttl/chembl_target-uniprot.ttl +< 2023-12-02T02:57:27 chembl_target-uniprot +togoid-config config/chembl_target-uniprot convert +> 2023-12-02T02:57:27 chembl_target-uniprot +### Update TTL for clinvar-medgen if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/clinvar-medgen.ttl is older than output/tsv/clinvar-medgen.tsv +## Convert output/tsv/clinvar-medgen.tsv => output/ttl/clinvar-medgen.ttl +< 2023-12-02T02:57:27 clinvar-medgen +togoid-config config/clinvar-medgen convert +> 2023-12-02T02:57:39 clinvar-medgen +### Update TTL for cog-insdc if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/cog-insdc.ttl is newer than output/tsv/cog-insdc.tsv +# => Preserving output/ttl/cog-insdc.ttl +### Update TTL for cog-refseq_protein if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/cog-refseq_protein.ttl is newer than output/tsv/cog-refseq_protein.tsv +# => Preserving output/ttl/cog-refseq_protein.ttl +### Update TTL for doid-mesh if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/doid-mesh.ttl is older than output/tsv/doid-mesh.tsv +## Convert output/tsv/doid-mesh.tsv => output/ttl/doid-mesh.ttl +< 2023-12-02T02:57:39 doid-mesh +togoid-config config/doid-mesh convert +> 2023-12-02T02:57:40 doid-mesh +### Update TTL for doid-ncit_disease if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/doid-ncit_disease.ttl is older than output/tsv/doid-ncit_disease.tsv +## Convert output/tsv/doid-ncit_disease.tsv => output/ttl/doid-ncit_disease.ttl +< 2023-12-02T02:57:40 doid-ncit_disease +togoid-config config/doid-ncit_disease convert +> 2023-12-02T02:57:40 doid-ncit_disease +### Update TTL for doid-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/doid-omim_phenotype.ttl is older than output/tsv/doid-omim_phenotype.tsv +## Convert output/tsv/doid-omim_phenotype.tsv => output/ttl/doid-omim_phenotype.ttl +< 2023-12-02T02:57:40 doid-omim_phenotype +togoid-config config/doid-omim_phenotype convert +> 2023-12-02T02:57:40 doid-omim_phenotype +### Update TTL for ensembl_gene-affy_probeset if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_gene-affy_probeset.ttl is older than output/tsv/ensembl_gene-affy_probeset.tsv +## Convert output/tsv/ensembl_gene-affy_probeset.tsv => output/ttl/ensembl_gene-affy_probeset.ttl +< 2023-12-02T02:57:40 ensembl_gene-affy_probeset +togoid-config config/ensembl_gene-affy_probeset convert +> 2023-12-02T02:57:40 ensembl_gene-affy_probeset +### Update TTL for ensembl_gene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_gene-ensembl_protein.ttl is older than output/tsv/ensembl_gene-ensembl_protein.tsv +## Convert output/tsv/ensembl_gene-ensembl_protein.tsv => output/ttl/ensembl_gene-ensembl_protein.ttl +< 2023-12-02T02:57:40 ensembl_gene-ensembl_protein +togoid-config config/ensembl_gene-ensembl_protein convert +> 2023-12-02T02:59:31 ensembl_gene-ensembl_protein +### Update TTL for ensembl_gene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_gene-ensembl_transcript.ttl is older than output/tsv/ensembl_gene-ensembl_transcript.tsv +## Convert output/tsv/ensembl_gene-ensembl_transcript.tsv => output/ttl/ensembl_gene-ensembl_transcript.ttl +< 2023-12-02T02:59:31 ensembl_gene-ensembl_transcript +togoid-config config/ensembl_gene-ensembl_transcript convert +> 2023-12-02T03:01:49 ensembl_gene-ensembl_transcript +### Update TTL for ensembl_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_gene-hgnc.ttl is older than output/tsv/ensembl_gene-hgnc.tsv +## Convert output/tsv/ensembl_gene-hgnc.tsv => output/ttl/ensembl_gene-hgnc.ttl +< 2023-12-02T03:01:49 ensembl_gene-hgnc +togoid-config config/ensembl_gene-hgnc convert +> 2023-12-02T03:01:50 ensembl_gene-hgnc +### Update TTL for ensembl_gene-ncbigene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_gene-ncbigene.ttl is older than output/tsv/ensembl_gene-ncbigene.tsv +## Convert output/tsv/ensembl_gene-ncbigene.tsv => output/ttl/ensembl_gene-ncbigene.ttl +< 2023-12-02T03:01:50 ensembl_gene-ncbigene +togoid-config config/ensembl_gene-ncbigene convert +> 2023-12-02T03:02:46 ensembl_gene-ncbigene +### Update TTL for ensembl_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_gene-uniprot.ttl is older than output/tsv/ensembl_gene-uniprot.tsv +## Convert output/tsv/ensembl_gene-uniprot.tsv => output/ttl/ensembl_gene-uniprot.ttl +< 2023-12-02T03:02:46 ensembl_gene-uniprot +togoid-config config/ensembl_gene-uniprot convert +> 2023-12-02T03:03:28 ensembl_gene-uniprot +### Update TTL for ensembl_protein-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_protein-ensembl_transcript.ttl is older than output/tsv/ensembl_protein-ensembl_transcript.tsv +## Convert output/tsv/ensembl_protein-ensembl_transcript.tsv => output/ttl/ensembl_protein-ensembl_transcript.ttl +< 2023-12-02T03:03:28 ensembl_protein-ensembl_transcript +togoid-config config/ensembl_protein-ensembl_transcript convert +> 2023-12-02T03:05:20 ensembl_protein-ensembl_transcript +### Update TTL for ensembl_transcript-affy_probeset if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_transcript-affy_probeset.ttl is older than output/tsv/ensembl_transcript-affy_probeset.tsv +## Convert output/tsv/ensembl_transcript-affy_probeset.tsv => output/ttl/ensembl_transcript-affy_probeset.ttl +< 2023-12-02T03:05:20 ensembl_transcript-affy_probeset +togoid-config config/ensembl_transcript-affy_probeset convert +> 2023-12-02T03:05:23 ensembl_transcript-affy_probeset +### Update TTL for ensembl_transcript-go if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_transcript-go.ttl is older than output/tsv/ensembl_transcript-go.tsv +## Convert output/tsv/ensembl_transcript-go.tsv => output/ttl/ensembl_transcript-go.ttl +< 2023-12-02T03:05:23 ensembl_transcript-go +togoid-config config/ensembl_transcript-go convert +> 2023-12-02T03:16:25 ensembl_transcript-go +### Update TTL for ensembl_transcript-hgnc if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_transcript-hgnc.ttl is older than output/tsv/ensembl_transcript-hgnc.tsv +## Convert output/tsv/ensembl_transcript-hgnc.tsv => output/ttl/ensembl_transcript-hgnc.ttl +< 2023-12-02T03:16:25 ensembl_transcript-hgnc +togoid-config config/ensembl_transcript-hgnc convert +> 2023-12-02T03:16:27 ensembl_transcript-hgnc +### Update TTL for ensembl_transcript-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ensembl_transcript-refseq_rna.ttl is older than output/tsv/ensembl_transcript-refseq_rna.tsv +## Convert output/tsv/ensembl_transcript-refseq_rna.tsv => output/ttl/ensembl_transcript-refseq_rna.ttl +< 2023-12-02T03:16:27 ensembl_transcript-refseq_rna +togoid-config config/ensembl_transcript-refseq_rna convert +> 2023-12-02T03:17:55 ensembl_transcript-refseq_rna +### Update TTL for gea-bioproject if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/gea-bioproject.ttl is older than output/tsv/gea-bioproject.tsv +## Convert output/tsv/gea-bioproject.tsv => output/ttl/gea-bioproject.ttl +< 2023-12-02T03:17:55 gea-bioproject +togoid-config config/gea-bioproject convert +> 2023-12-02T03:17:55 gea-bioproject +### Update TTL for gea-biosample if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/gea-biosample.ttl is older than output/tsv/gea-biosample.tsv +## Convert output/tsv/gea-biosample.tsv => output/ttl/gea-biosample.ttl +< 2023-12-02T03:17:55 gea-biosample +togoid-config config/gea-biosample convert +> 2023-12-02T03:17:56 gea-biosample +### Update TTL for glytoucan-doid if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/glytoucan-doid.ttl is newer than output/tsv/glytoucan-doid.tsv +# => Preserving output/ttl/glytoucan-doid.ttl +### Update TTL for glytoucan-ncbigene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/glytoucan-ncbigene.ttl is newer than output/tsv/glytoucan-ncbigene.tsv +# => Preserving output/ttl/glytoucan-ncbigene.ttl +### Update TTL for glytoucan-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/glytoucan-uniprot.ttl is newer than output/tsv/glytoucan-uniprot.tsv +# => Preserving output/ttl/glytoucan-uniprot.ttl +### Update TTL for hgnc-ccds if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-ccds.ttl is older than output/tsv/hgnc-ccds.tsv +## Convert output/tsv/hgnc-ccds.tsv => output/ttl/hgnc-ccds.ttl +< 2023-12-02T03:17:56 hgnc-ccds +togoid-config config/hgnc-ccds convert +> 2023-12-02T03:17:56 hgnc-ccds +### Update TTL for hgnc-ec if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-ec.ttl is older than output/tsv/hgnc-ec.tsv +## Convert output/tsv/hgnc-ec.tsv => output/ttl/hgnc-ec.ttl +< 2023-12-02T03:17:56 hgnc-ec +togoid-config config/hgnc-ec convert +> 2023-12-02T03:17:56 hgnc-ec +### Update TTL for hgnc-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-ensembl_gene.ttl is older than output/tsv/hgnc-ensembl_gene.tsv +## Convert output/tsv/hgnc-ensembl_gene.tsv => output/ttl/hgnc-ensembl_gene.ttl +< 2023-12-02T03:17:56 hgnc-ensembl_gene +togoid-config config/hgnc-ensembl_gene convert +> 2023-12-02T03:17:57 hgnc-ensembl_gene +### Update TTL for hgnc-hgnc_symbol if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-hgnc_symbol.ttl is older than output/tsv/hgnc-hgnc_symbol.tsv +## Convert output/tsv/hgnc-hgnc_symbol.tsv => output/ttl/hgnc-hgnc_symbol.ttl +< 2023-12-02T03:17:57 hgnc-hgnc_symbol +togoid-config config/hgnc-hgnc_symbol convert +> 2023-12-02T03:17:58 hgnc-hgnc_symbol +### Update TTL for hgnc-insdc if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-insdc.ttl is older than output/tsv/hgnc-insdc.tsv +## Convert output/tsv/hgnc-insdc.tsv => output/ttl/hgnc-insdc.ttl +< 2023-12-02T03:17:58 hgnc-insdc +togoid-config config/hgnc-insdc convert +> 2023-12-02T03:17:58 hgnc-insdc +### Update TTL for hgnc-lrg if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-lrg.ttl is older than output/tsv/hgnc-lrg.tsv +## Convert output/tsv/hgnc-lrg.tsv => output/ttl/hgnc-lrg.ttl +< 2023-12-02T03:17:58 hgnc-lrg +togoid-config config/hgnc-lrg convert +> 2023-12-02T03:17:58 hgnc-lrg +### Update TTL for hgnc-mgi_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-mgi_gene.ttl is older than output/tsv/hgnc-mgi_gene.tsv +## Convert output/tsv/hgnc-mgi_gene.tsv => output/ttl/hgnc-mgi_gene.ttl +< 2023-12-02T03:17:58 hgnc-mgi_gene +togoid-config config/hgnc-mgi_gene convert +> 2023-12-02T03:17:59 hgnc-mgi_gene +### Update TTL for hgnc-mirbase if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-mirbase.ttl is older than output/tsv/hgnc-mirbase.tsv +## Convert output/tsv/hgnc-mirbase.tsv => output/ttl/hgnc-mirbase.ttl +< 2023-12-02T03:17:59 hgnc-mirbase +togoid-config config/hgnc-mirbase convert +> 2023-12-02T03:17:59 hgnc-mirbase +### Update TTL for hgnc-ncbigene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-ncbigene.ttl is older than output/tsv/hgnc-ncbigene.tsv +## Convert output/tsv/hgnc-ncbigene.tsv => output/ttl/hgnc-ncbigene.ttl +< 2023-12-02T03:17:59 hgnc-ncbigene +togoid-config config/hgnc-ncbigene convert +> 2023-12-02T03:17:59 hgnc-ncbigene +### Update TTL for hgnc-omim_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-omim_gene.ttl is older than output/tsv/hgnc-omim_gene.tsv +## Convert output/tsv/hgnc-omim_gene.tsv => output/ttl/hgnc-omim_gene.ttl +< 2023-12-02T03:17:59 hgnc-omim_gene +togoid-config config/hgnc-omim_gene convert +> 2023-12-02T03:18:00 hgnc-omim_gene +### Update TTL for hgnc-pubmed if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-pubmed.ttl is older than output/tsv/hgnc-pubmed.tsv +## Convert output/tsv/hgnc-pubmed.tsv => output/ttl/hgnc-pubmed.ttl +< 2023-12-02T03:18:00 hgnc-pubmed +togoid-config config/hgnc-pubmed convert +> 2023-12-02T03:18:00 hgnc-pubmed +### Update TTL for hgnc-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-refseq_rna.ttl is older than output/tsv/hgnc-refseq_rna.tsv +## Convert output/tsv/hgnc-refseq_rna.tsv => output/ttl/hgnc-refseq_rna.ttl +< 2023-12-02T03:18:00 hgnc-refseq_rna +togoid-config config/hgnc-refseq_rna convert +> 2023-12-02T03:18:01 hgnc-refseq_rna +### Update TTL for hgnc-rgd if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-rgd.ttl is older than output/tsv/hgnc-rgd.tsv +## Convert output/tsv/hgnc-rgd.tsv => output/ttl/hgnc-rgd.ttl +< 2023-12-02T03:18:01 hgnc-rgd +togoid-config config/hgnc-rgd convert +> 2023-12-02T03:18:01 hgnc-rgd +### Update TTL for hgnc-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hgnc-uniprot.ttl is older than output/tsv/hgnc-uniprot.tsv +## Convert output/tsv/hgnc-uniprot.tsv => output/ttl/hgnc-uniprot.ttl +< 2023-12-02T03:18:01 hgnc-uniprot +togoid-config config/hgnc-uniprot convert +> 2023-12-02T03:18:02 hgnc-uniprot +### Update TTL for hmdb-chebi if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/hmdb-chebi.ttl is newer than output/tsv/hmdb-chebi.tsv +# => Preserving output/ttl/hmdb-chebi.ttl +### Update TTL for hmdb-inchi_key if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/hmdb-inchi_key.ttl is newer than output/tsv/hmdb-inchi_key.tsv +# => Preserving output/ttl/hmdb-inchi_key.ttl +### Update TTL for hmdb-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/hmdb-pdb_ccd.ttl is newer than output/tsv/hmdb-pdb_ccd.tsv +# => Preserving output/ttl/hmdb-pdb_ccd.ttl +### Update TTL for hmdb-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/hmdb-pubchem_compound.ttl is newer than output/tsv/hmdb-pubchem_compound.tsv +# => Preserving output/ttl/hmdb-pubchem_compound.ttl +### Update TTL for homologene-ncbigene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/homologene-ncbigene.ttl is newer than output/tsv/homologene-ncbigene.tsv +# => Preserving output/ttl/homologene-ncbigene.ttl +### Update TTL for hp_inheritance-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/hp_inheritance-omim_phenotype.ttl is older than output/tsv/hp_inheritance-omim_phenotype.tsv +## Convert output/tsv/hp_inheritance-omim_phenotype.tsv => output/ttl/hp_inheritance-omim_phenotype.ttl +< 2023-12-02T03:18:02 hp_inheritance-omim_phenotype +togoid-config config/hp_inheritance-omim_phenotype convert +> 2023-12-02T03:18:02 hp_inheritance-omim_phenotype +### Update TTL for hp_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/hp_phenotype-omim_phenotype.ttl is newer than output/tsv/hp_phenotype-omim_phenotype.tsv +# => Preserving output/ttl/hp_phenotype-omim_phenotype.ttl +### Update TTL for hp_phenotype-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/hp_phenotype-orphanet_phenotype.ttl is newer than output/tsv/hp_phenotype-orphanet_phenotype.tsv +# => Preserving output/ttl/hp_phenotype-orphanet_phenotype.ttl +### Update TTL for insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/insdc-bioproject.ttl is older than output/tsv/insdc-bioproject.tsv +## Convert output/tsv/insdc-bioproject.tsv => output/ttl/insdc-bioproject.ttl +< 2023-12-02T03:18:02 insdc-bioproject +togoid-config config/insdc-bioproject convert +> 2023-12-02T03:27:19 insdc-bioproject +### Update TTL for insdc-biosample if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/insdc-biosample.ttl is older than output/tsv/insdc-biosample.tsv +## Convert output/tsv/insdc-biosample.tsv => output/ttl/insdc-biosample.ttl +< 2023-12-02T03:27:19 insdc-biosample +togoid-config config/insdc-biosample convert +> 2023-12-02T04:07:06 insdc-biosample +### Update TTL for insdc_master-bioproject if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/insdc_master-bioproject.ttl is older than output/tsv/insdc_master-bioproject.tsv +## Convert output/tsv/insdc_master-bioproject.tsv => output/ttl/insdc_master-bioproject.ttl +< 2023-12-02T04:07:06 insdc_master-bioproject +togoid-config config/insdc_master-bioproject convert +> 2023-12-02T04:07:21 insdc_master-bioproject +### Update TTL for insdc_master-biosample if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/insdc_master-biosample.ttl is older than output/tsv/insdc_master-biosample.tsv +## Convert output/tsv/insdc_master-biosample.tsv => output/ttl/insdc_master-biosample.ttl +< 2023-12-02T04:07:21 insdc_master-biosample +togoid-config config/insdc_master-biosample convert +> 2023-12-02T04:07:34 insdc_master-biosample +### Update TTL for interpro-go if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-go.ttl is newer than output/tsv/interpro-go.tsv +# => Preserving output/ttl/interpro-go.ttl +### Update TTL for interpro-pdb if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-pdb.ttl is newer than output/tsv/interpro-pdb.tsv +# => Preserving output/ttl/interpro-pdb.ttl +### Update TTL for interpro-pfam if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-pfam.ttl is newer than output/tsv/interpro-pfam.tsv +# => Preserving output/ttl/interpro-pfam.ttl +### Update TTL for interpro-prosite if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-prosite.ttl is newer than output/tsv/interpro-prosite.tsv +# => Preserving output/ttl/interpro-prosite.ttl +### Update TTL for interpro-pubmed if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-pubmed.ttl is newer than output/tsv/interpro-pubmed.tsv +# => Preserving output/ttl/interpro-pubmed.ttl +### Update TTL for interpro-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-reactome_pathway.ttl is newer than output/tsv/interpro-reactome_pathway.tsv +# => Preserving output/ttl/interpro-reactome_pathway.ttl +### Update TTL for interpro-smart if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-smart.ttl is newer than output/tsv/interpro-smart.tsv +# => Preserving output/ttl/interpro-smart.ttl +### Update TTL for interpro-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/interpro-uniprot.ttl is newer than output/tsv/interpro-uniprot.tsv +# => Preserving output/ttl/interpro-uniprot.ttl +### Update TTL for jga_study-jga_dataset if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/jga_study-jga_dataset.ttl is older than output/tsv/jga_study-jga_dataset.tsv +## Convert output/tsv/jga_study-jga_dataset.tsv => output/ttl/jga_study-jga_dataset.ttl +< 2023-12-02T04:07:34 jga_study-jga_dataset +togoid-config config/jga_study-jga_dataset convert +> 2023-12-02T04:07:34 jga_study-jga_dataset +### Update TTL for jga_study-nbdc_human_db if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/jga_study-nbdc_human_db.ttl is older than output/tsv/jga_study-nbdc_human_db.tsv +## Convert output/tsv/jga_study-nbdc_human_db.tsv => output/ttl/jga_study-nbdc_human_db.ttl +< 2023-12-02T04:07:34 jga_study-nbdc_human_db +togoid-config config/jga_study-nbdc_human_db convert +> 2023-12-02T04:07:34 jga_study-nbdc_human_db +### Update TTL for jga_study-pubmed if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/jga_study-pubmed.ttl is older than output/tsv/jga_study-pubmed.tsv +## Convert output/tsv/jga_study-pubmed.tsv => output/ttl/jga_study-pubmed.ttl +< 2023-12-02T04:07:34 jga_study-pubmed +togoid-config config/jga_study-pubmed convert +> 2023-12-02T04:07:34 jga_study-pubmed +### Update TTL for lipidmaps-chebi if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/lipidmaps-chebi.ttl is newer than output/tsv/lipidmaps-chebi.tsv +# => Preserving output/ttl/lipidmaps-chebi.ttl +### Update TTL for lipidmaps-inchi_key if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/lipidmaps-inchi_key.ttl is newer than output/tsv/lipidmaps-inchi_key.tsv +# => Preserving output/ttl/lipidmaps-inchi_key.ttl +### Update TTL for lipidmaps-swisslipids if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/lipidmaps-swisslipids.ttl is newer than output/tsv/lipidmaps-swisslipids.tsv +# => Preserving output/ttl/lipidmaps-swisslipids.ttl +### Update TTL for mbgd_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/mbgd_gene-uniprot.ttl is newer than output/tsv/mbgd_gene-uniprot.tsv +# => Preserving output/ttl/mbgd_gene-uniprot.ttl +### Update TTL for mbgd_organism-taxonomy if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/mbgd_organism-taxonomy.ttl is newer than output/tsv/mbgd_organism-taxonomy.tsv +# => Preserving output/ttl/mbgd_organism-taxonomy.ttl +### Update TTL for medgen-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/medgen-hp_phenotype.ttl is older than output/tsv/medgen-hp_phenotype.tsv +## Convert output/tsv/medgen-hp_phenotype.tsv => output/ttl/medgen-hp_phenotype.ttl +< 2023-12-02T04:07:34 medgen-hp_phenotype +togoid-config config/medgen-hp_phenotype convert +> 2023-12-02T04:07:35 medgen-hp_phenotype +### Update TTL for medgen-mesh if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/medgen-mesh.ttl is older than output/tsv/medgen-mesh.tsv +## Convert output/tsv/medgen-mesh.tsv => output/ttl/medgen-mesh.ttl +< 2023-12-02T04:07:35 medgen-mesh +togoid-config config/medgen-mesh convert +> 2023-12-02T04:07:35 medgen-mesh +### Update TTL for medgen-mondo if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/medgen-mondo.ttl is older than output/tsv/medgen-mondo.tsv +## Convert output/tsv/medgen-mondo.tsv => output/ttl/medgen-mondo.ttl +< 2023-12-02T04:07:35 medgen-mondo +togoid-config config/medgen-mondo convert +> 2023-12-02T04:07:36 medgen-mondo +### Update TTL for medgen-ncbigene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/medgen-ncbigene.ttl is older than output/tsv/medgen-ncbigene.tsv +## Convert output/tsv/medgen-ncbigene.tsv => output/ttl/medgen-ncbigene.ttl +< 2023-12-02T04:07:36 medgen-ncbigene +togoid-config config/medgen-ncbigene convert +> 2023-12-02T04:07:36 medgen-ncbigene +### Update TTL for medgen-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/medgen-omim_phenotype.ttl is older than output/tsv/medgen-omim_phenotype.tsv +## Convert output/tsv/medgen-omim_phenotype.tsv => output/ttl/medgen-omim_phenotype.ttl +< 2023-12-02T04:07:36 medgen-omim_phenotype +togoid-config config/medgen-omim_phenotype convert +> 2023-12-02T04:07:36 medgen-omim_phenotype +### Update TTL for medgen-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/medgen-orphanet_phenotype.ttl is older than output/tsv/medgen-orphanet_phenotype.tsv +## Convert output/tsv/medgen-orphanet_phenotype.tsv => output/ttl/medgen-orphanet_phenotype.ttl +< 2023-12-02T04:07:36 medgen-orphanet_phenotype +togoid-config config/medgen-orphanet_phenotype convert +> 2023-12-02T04:07:37 medgen-orphanet_phenotype +### Update TTL for mgi_gene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_gene-ensembl_gene.ttl is older than output/tsv/mgi_gene-ensembl_gene.tsv +## Convert output/tsv/mgi_gene-ensembl_gene.tsv => output/ttl/mgi_gene-ensembl_gene.ttl +< 2023-12-02T04:07:37 mgi_gene-ensembl_gene +togoid-config config/mgi_gene-ensembl_gene convert +> 2023-12-02T04:07:37 mgi_gene-ensembl_gene +### Update TTL for mgi_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_gene-hgnc.ttl is older than output/tsv/mgi_gene-hgnc.tsv +## Convert output/tsv/mgi_gene-hgnc.tsv => output/ttl/mgi_gene-hgnc.ttl +< 2023-12-02T04:07:37 mgi_gene-hgnc +togoid-config config/mgi_gene-hgnc convert +> 2023-12-02T04:07:38 mgi_gene-hgnc +### Update TTL for mgi_gene-mgi_allele if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_gene-mgi_allele.ttl is older than output/tsv/mgi_gene-mgi_allele.tsv +## Convert output/tsv/mgi_gene-mgi_allele.tsv => output/ttl/mgi_gene-mgi_allele.ttl +< 2023-12-02T04:07:38 mgi_gene-mgi_allele +togoid-config config/mgi_gene-mgi_allele convert +> 2023-12-02T04:07:39 mgi_gene-mgi_allele +### Update TTL for mgi_gene-ncbigene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_gene-ncbigene.ttl is older than output/tsv/mgi_gene-ncbigene.tsv +## Convert output/tsv/mgi_gene-ncbigene.tsv => output/ttl/mgi_gene-ncbigene.ttl +< 2023-12-02T04:07:39 mgi_gene-ncbigene +togoid-config config/mgi_gene-ncbigene convert +> 2023-12-02T04:07:39 mgi_gene-ncbigene +### Update TTL for mgi_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_gene-uniprot.ttl is older than output/tsv/mgi_gene-uniprot.tsv +## Convert output/tsv/mgi_gene-uniprot.tsv => output/ttl/mgi_gene-uniprot.ttl +< 2023-12-02T04:07:39 mgi_gene-uniprot +togoid-config config/mgi_gene-uniprot convert +> 2023-12-02T04:07:40 mgi_gene-uniprot +### Update TTL for mgi_genotype-doid if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_genotype-doid.ttl is older than output/tsv/mgi_genotype-doid.tsv +## Convert output/tsv/mgi_genotype-doid.tsv => output/ttl/mgi_genotype-doid.ttl +< 2023-12-02T04:07:40 mgi_genotype-doid +togoid-config config/mgi_genotype-doid convert +> 2023-12-02T04:07:40 mgi_genotype-doid +### Update TTL for mgi_genotype-mgi_allele if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_genotype-mgi_allele.ttl is older than output/tsv/mgi_genotype-mgi_allele.tsv +## Convert output/tsv/mgi_genotype-mgi_allele.tsv => output/ttl/mgi_genotype-mgi_allele.ttl +< 2023-12-02T04:07:40 mgi_genotype-mgi_allele +togoid-config config/mgi_genotype-mgi_allele convert +> 2023-12-02T04:07:42 mgi_genotype-mgi_allele +### Update TTL for mgi_genotype-mp if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mgi_genotype-mp.ttl is older than output/tsv/mgi_genotype-mp.tsv +## Convert output/tsv/mgi_genotype-mp.tsv => output/ttl/mgi_genotype-mp.ttl +< 2023-12-02T04:07:42 mgi_genotype-mp +togoid-config config/mgi_genotype-mp convert +> 2023-12-02T04:07:45 mgi_genotype-mp +### Update TTL for mondo-doid if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mondo-doid.ttl is older than output/tsv/mondo-doid.tsv +## Convert output/tsv/mondo-doid.tsv => output/ttl/mondo-doid.ttl +< 2023-12-02T04:07:45 mondo-doid +togoid-config config/mondo-doid convert +> 2023-12-02T04:07:45 mondo-doid +### Update TTL for mondo-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mondo-hp_phenotype.ttl is older than output/tsv/mondo-hp_phenotype.tsv +## Convert output/tsv/mondo-hp_phenotype.tsv => output/ttl/mondo-hp_phenotype.ttl +< 2023-12-02T04:07:45 mondo-hp_phenotype +togoid-config config/mondo-hp_phenotype convert +> 2023-12-02T04:07:45 mondo-hp_phenotype +### Update TTL for mondo-meddra if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mondo-meddra.ttl is older than output/tsv/mondo-meddra.tsv +## Convert output/tsv/mondo-meddra.tsv => output/ttl/mondo-meddra.ttl +< 2023-12-02T04:07:46 mondo-meddra +togoid-config config/mondo-meddra convert +> 2023-12-02T04:07:46 mondo-meddra +### Update TTL for mondo-mesh if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mondo-mesh.ttl is older than output/tsv/mondo-mesh.tsv +## Convert output/tsv/mondo-mesh.tsv => output/ttl/mondo-mesh.ttl +< 2023-12-02T04:07:46 mondo-mesh +togoid-config config/mondo-mesh convert +> 2023-12-02T04:07:46 mondo-mesh +### Update TTL for mondo-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mondo-omim_phenotype.ttl is older than output/tsv/mondo-omim_phenotype.tsv +## Convert output/tsv/mondo-omim_phenotype.tsv => output/ttl/mondo-omim_phenotype.ttl +< 2023-12-02T04:07:46 mondo-omim_phenotype +togoid-config config/mondo-omim_phenotype convert +> 2023-12-02T04:07:46 mondo-omim_phenotype +### Update TTL for mondo-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/mondo-orphanet_phenotype.ttl is older than output/tsv/mondo-orphanet_phenotype.tsv +## Convert output/tsv/mondo-orphanet_phenotype.tsv => output/ttl/mondo-orphanet_phenotype.ttl +< 2023-12-02T04:07:46 mondo-orphanet_phenotype +togoid-config config/mondo-orphanet_phenotype convert +> 2023-12-02T04:07:47 mondo-orphanet_phenotype +### Update TTL for nando-mondo if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/nando-mondo.ttl is older than output/tsv/nando-mondo.tsv +## Convert output/tsv/nando-mondo.tsv => output/ttl/nando-mondo.ttl +< 2023-12-02T04:07:47 nando-mondo +togoid-config config/nando-mondo convert +> 2023-12-02T04:07:47 nando-mondo +### Update TTL for ncbigene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-ensembl_gene.ttl is older than output/tsv/ncbigene-ensembl_gene.tsv +## Convert output/tsv/ncbigene-ensembl_gene.tsv => output/ttl/ncbigene-ensembl_gene.ttl +< 2023-12-02T04:07:47 ncbigene-ensembl_gene +togoid-config config/ncbigene-ensembl_gene convert +> 2023-12-02T04:09:13 ncbigene-ensembl_gene +### Update TTL for ncbigene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-ensembl_protein.ttl is older than output/tsv/ncbigene-ensembl_protein.tsv +## Convert output/tsv/ncbigene-ensembl_protein.tsv => output/ttl/ncbigene-ensembl_protein.ttl +< 2023-12-02T04:09:13 ncbigene-ensembl_protein +togoid-config config/ncbigene-ensembl_protein convert +> 2023-12-02T04:10:41 ncbigene-ensembl_protein +### Update TTL for ncbigene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-ensembl_transcript.ttl is older than output/tsv/ncbigene-ensembl_transcript.tsv +## Convert output/tsv/ncbigene-ensembl_transcript.tsv => output/ttl/ncbigene-ensembl_transcript.ttl +< 2023-12-02T04:10:41 ncbigene-ensembl_transcript +togoid-config config/ncbigene-ensembl_transcript convert +> 2023-12-02T04:12:23 ncbigene-ensembl_transcript +### Update TTL for ncbigene-flybase_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-flybase_gene.ttl is older than output/tsv/ncbigene-flybase_gene.tsv +## Convert output/tsv/ncbigene-flybase_gene.tsv => output/ttl/ncbigene-flybase_gene.ttl +< 2023-12-02T04:12:24 ncbigene-flybase_gene +togoid-config config/ncbigene-flybase_gene convert +> 2023-12-02T04:12:24 ncbigene-flybase_gene +### Update TTL for ncbigene-go if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-go.ttl is older than output/tsv/ncbigene-go.tsv +## Convert output/tsv/ncbigene-go.tsv => output/ttl/ncbigene-go.ttl +< 2023-12-02T04:12:24 ncbigene-go +togoid-config config/ncbigene-go convert +> 2023-12-02T04:20:31 ncbigene-go +### Update TTL for ncbigene-hgnc if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-hgnc.ttl is older than output/tsv/ncbigene-hgnc.tsv +## Convert output/tsv/ncbigene-hgnc.tsv => output/ttl/ncbigene-hgnc.ttl +< 2023-12-02T04:20:31 ncbigene-hgnc +togoid-config config/ncbigene-hgnc convert +> 2023-12-02T04:20:32 ncbigene-hgnc +### Update TTL for ncbigene-mgi_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-mgi_gene.ttl is older than output/tsv/ncbigene-mgi_gene.tsv +## Convert output/tsv/ncbigene-mgi_gene.tsv => output/ttl/ncbigene-mgi_gene.ttl +< 2023-12-02T04:20:32 ncbigene-mgi_gene +togoid-config config/ncbigene-mgi_gene convert +> 2023-12-02T04:20:33 ncbigene-mgi_gene +### Update TTL for ncbigene-mirbase if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-mirbase.ttl is older than output/tsv/ncbigene-mirbase.tsv +## Convert output/tsv/ncbigene-mirbase.tsv => output/ttl/ncbigene-mirbase.ttl +< 2023-12-02T04:20:33 ncbigene-mirbase +togoid-config config/ncbigene-mirbase convert +> 2023-12-02T04:20:33 ncbigene-mirbase +### Update TTL for ncbigene-omim_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-omim_gene.ttl is older than output/tsv/ncbigene-omim_gene.tsv +## Convert output/tsv/ncbigene-omim_gene.tsv => output/ttl/ncbigene-omim_gene.ttl +< 2023-12-02T04:20:33 ncbigene-omim_gene +togoid-config config/ncbigene-omim_gene convert +> 2023-12-02T04:20:34 ncbigene-omim_gene +### Update TTL for ncbigene-refseq_genomic if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-refseq_genomic.ttl is older than output/tsv/ncbigene-refseq_genomic.tsv +## Convert output/tsv/ncbigene-refseq_genomic.tsv => output/ttl/ncbigene-refseq_genomic.ttl +< 2023-12-02T04:20:34 ncbigene-refseq_genomic +togoid-config config/ncbigene-refseq_genomic convert +> 2023-12-02T04:20:36 ncbigene-refseq_genomic +### Update TTL for ncbigene-refseq_protein if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-refseq_protein.ttl is older than output/tsv/ncbigene-refseq_protein.tsv +## Convert output/tsv/ncbigene-refseq_protein.tsv => output/ttl/ncbigene-refseq_protein.ttl +< 2023-12-02T04:20:36 ncbigene-refseq_protein +togoid-config config/ncbigene-refseq_protein convert +> 2023-12-02T04:32:03 ncbigene-refseq_protein +### Update TTL for ncbigene-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-refseq_rna.ttl is older than output/tsv/ncbigene-refseq_rna.tsv +## Convert output/tsv/ncbigene-refseq_rna.tsv => output/ttl/ncbigene-refseq_rna.ttl +< 2023-12-02T04:32:03 ncbigene-refseq_rna +togoid-config config/ncbigene-refseq_rna convert +> 2023-12-02T04:42:04 ncbigene-refseq_rna +### Update TTL for ncbigene-rgd if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-rgd.ttl is older than output/tsv/ncbigene-rgd.tsv +## Convert output/tsv/ncbigene-rgd.tsv => output/ttl/ncbigene-rgd.ttl +< 2023-12-02T04:42:04 ncbigene-rgd +togoid-config config/ncbigene-rgd convert +> 2023-12-02T04:42:05 ncbigene-rgd +### Update TTL for ncbigene-sgd if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-sgd.ttl is older than output/tsv/ncbigene-sgd.tsv +## Convert output/tsv/ncbigene-sgd.tsv => output/ttl/ncbigene-sgd.ttl +< 2023-12-02T04:42:05 ncbigene-sgd +togoid-config config/ncbigene-sgd convert +> 2023-12-02T04:42:05 ncbigene-sgd +### Update TTL for ncbigene-tair if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-tair.ttl is older than output/tsv/ncbigene-tair.tsv +## Convert output/tsv/ncbigene-tair.tsv => output/ttl/ncbigene-tair.ttl +< 2023-12-02T04:42:05 ncbigene-tair +togoid-config config/ncbigene-tair convert +> 2023-12-02T04:42:06 ncbigene-tair +### Update TTL for ncbigene-taxonomy if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-taxonomy.ttl is older than output/tsv/ncbigene-taxonomy.tsv +## Convert output/tsv/ncbigene-taxonomy.tsv => output/ttl/ncbigene-taxonomy.ttl +< 2023-12-02T04:42:06 ncbigene-taxonomy +togoid-config config/ncbigene-taxonomy convert +> 2023-12-02T04:49:57 ncbigene-taxonomy +### Update TTL for ncbigene-vgnc if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-vgnc.ttl is older than output/tsv/ncbigene-vgnc.tsv +## Convert output/tsv/ncbigene-vgnc.tsv => output/ttl/ncbigene-vgnc.ttl +< 2023-12-02T04:49:57 ncbigene-vgnc +togoid-config config/ncbigene-vgnc convert +> 2023-12-02T04:49:59 ncbigene-vgnc +### Update TTL for ncbigene-wormbase_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-wormbase_gene.ttl is older than output/tsv/ncbigene-wormbase_gene.tsv +## Convert output/tsv/ncbigene-wormbase_gene.tsv => output/ttl/ncbigene-wormbase_gene.ttl +< 2023-12-02T04:49:59 ncbigene-wormbase_gene +togoid-config config/ncbigene-wormbase_gene convert +> 2023-12-02T04:49:59 ncbigene-wormbase_gene +### Update TTL for ncbigene-xenbase_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-xenbase_gene.ttl is older than output/tsv/ncbigene-xenbase_gene.tsv +## Convert output/tsv/ncbigene-xenbase_gene.tsv => output/ttl/ncbigene-xenbase_gene.ttl +< 2023-12-02T04:49:59 ncbigene-xenbase_gene +togoid-config config/ncbigene-xenbase_gene convert +> 2023-12-02T04:50:00 ncbigene-xenbase_gene +### Update TTL for ncbigene-zfin_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/ncbigene-zfin_gene.ttl is older than output/tsv/ncbigene-zfin_gene.tsv +## Convert output/tsv/ncbigene-zfin_gene.tsv => output/ttl/ncbigene-zfin_gene.ttl +< 2023-12-02T04:50:00 ncbigene-zfin_gene +togoid-config config/ncbigene-zfin_gene convert +> 2023-12-02T04:50:00 ncbigene-zfin_gene +### Update TTL for ncit_disease-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/ncit_disease-ncit_tissue.ttl is newer than output/tsv/ncit_disease-ncit_tissue.tsv +# => Preserving output/ttl/ncit_disease-ncit_tissue.ttl +### Update TTL for oma_protein-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/oma_protein-ensembl_gene.ttl is newer than output/tsv/oma_protein-ensembl_gene.tsv +# => Preserving output/ttl/oma_protein-ensembl_gene.ttl +### Update TTL for oma_protein-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/oma_protein-ensembl_transcript.ttl is newer than output/tsv/oma_protein-ensembl_transcript.tsv +# => Preserving output/ttl/oma_protein-ensembl_transcript.ttl +### Update TTL for oma_protein-ncbigene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/oma_protein-ncbigene.ttl is newer than output/tsv/oma_protein-ncbigene.tsv +# => Preserving output/ttl/oma_protein-ncbigene.ttl +### Update TTL for oma_protein-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/oma_protein-uniprot.ttl is newer than output/tsv/oma_protein-uniprot.tsv +# => Preserving output/ttl/oma_protein-uniprot.ttl +### Update TTL for orphanet_gene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_gene-ensembl_gene.ttl is older than output/tsv/orphanet_gene-ensembl_gene.tsv +## Convert output/tsv/orphanet_gene-ensembl_gene.tsv => output/ttl/orphanet_gene-ensembl_gene.ttl +< 2023-12-02T04:50:00 orphanet_gene-ensembl_gene +togoid-config config/orphanet_gene-ensembl_gene convert +> 2023-12-02T04:50:01 orphanet_gene-ensembl_gene +### Update TTL for orphanet_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_gene-hgnc.ttl is older than output/tsv/orphanet_gene-hgnc.tsv +## Convert output/tsv/orphanet_gene-hgnc.tsv => output/ttl/orphanet_gene-hgnc.ttl +< 2023-12-02T04:50:01 orphanet_gene-hgnc +togoid-config config/orphanet_gene-hgnc convert +> 2023-12-02T04:50:01 orphanet_gene-hgnc +### Update TTL for orphanet_gene-omim_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_gene-omim_gene.ttl is older than output/tsv/orphanet_gene-omim_gene.tsv +## Convert output/tsv/orphanet_gene-omim_gene.tsv => output/ttl/orphanet_gene-omim_gene.ttl +< 2023-12-02T04:50:01 orphanet_gene-omim_gene +togoid-config config/orphanet_gene-omim_gene convert +> 2023-12-02T04:50:01 orphanet_gene-omim_gene +### Update TTL for orphanet_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_gene-uniprot.ttl is older than output/tsv/orphanet_gene-uniprot.tsv +## Convert output/tsv/orphanet_gene-uniprot.tsv => output/ttl/orphanet_gene-uniprot.ttl +< 2023-12-02T04:50:01 orphanet_gene-uniprot +togoid-config config/orphanet_gene-uniprot convert +> 2023-12-02T04:50:01 orphanet_gene-uniprot +### Update TTL for orphanet_phenotype-meddra if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_phenotype-meddra.ttl is older than output/tsv/orphanet_phenotype-meddra.tsv +## Convert output/tsv/orphanet_phenotype-meddra.tsv => output/ttl/orphanet_phenotype-meddra.ttl +< 2023-12-02T04:50:01 orphanet_phenotype-meddra +togoid-config config/orphanet_phenotype-meddra convert +> 2023-12-02T04:50:01 orphanet_phenotype-meddra +### Update TTL for orphanet_phenotype-mesh if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_phenotype-mesh.ttl is older than output/tsv/orphanet_phenotype-mesh.tsv +## Convert output/tsv/orphanet_phenotype-mesh.tsv => output/ttl/orphanet_phenotype-mesh.ttl +< 2023-12-02T04:50:01 orphanet_phenotype-mesh +togoid-config config/orphanet_phenotype-mesh convert +> 2023-12-02T04:50:02 orphanet_phenotype-mesh +### Update TTL for orphanet_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_phenotype-omim_phenotype.ttl is older than output/tsv/orphanet_phenotype-omim_phenotype.tsv +## Convert output/tsv/orphanet_phenotype-omim_phenotype.tsv => output/ttl/orphanet_phenotype-omim_phenotype.ttl +< 2023-12-02T04:50:02 orphanet_phenotype-omim_phenotype +togoid-config config/orphanet_phenotype-omim_phenotype convert +> 2023-12-02T04:50:02 orphanet_phenotype-omim_phenotype +### Update TTL for orphanet_phenotype-orphanet_gene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/orphanet_phenotype-orphanet_gene.ttl is older than output/tsv/orphanet_phenotype-orphanet_gene.tsv +## Convert output/tsv/orphanet_phenotype-orphanet_gene.tsv => output/ttl/orphanet_phenotype-orphanet_gene.ttl +< 2023-12-02T04:50:02 orphanet_phenotype-orphanet_gene +togoid-config config/orphanet_phenotype-orphanet_gene convert +> 2023-12-02T04:50:02 orphanet_phenotype-orphanet_gene +### Update TTL for pdb-go if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pdb-go.ttl is older than output/tsv/pdb-go.tsv +## Convert output/tsv/pdb-go.tsv => output/ttl/pdb-go.ttl +< 2023-12-02T04:50:02 pdb-go +togoid-config config/pdb-go convert +> 2023-12-02T04:50:16 pdb-go +### Update TTL for pdb-interpro if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pdb-interpro.ttl is older than output/tsv/pdb-interpro.tsv +## Convert output/tsv/pdb-interpro.tsv => output/ttl/pdb-interpro.ttl +< 2023-12-02T04:50:16 pdb-interpro +togoid-config config/pdb-interpro convert +> 2023-12-02T04:50:22 pdb-interpro +### Update TTL for pdb-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pdb-pdb_ccd.ttl is older than output/tsv/pdb-pdb_ccd.tsv +## Convert output/tsv/pdb-pdb_ccd.tsv => output/ttl/pdb-pdb_ccd.ttl +< 2023-12-02T04:50:22 pdb-pdb_ccd +togoid-config config/pdb-pdb_ccd convert +> 2023-12-02T04:50:26 pdb-pdb_ccd +### Update TTL for pdb-pfam if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pdb-pfam.ttl is older than output/tsv/pdb-pfam.tsv +## Convert output/tsv/pdb-pfam.tsv => output/ttl/pdb-pfam.ttl +< 2023-12-02T04:50:26 pdb-pfam +togoid-config config/pdb-pfam convert +> 2023-12-02T04:50:29 pdb-pfam +### Update TTL for pdb-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pdb-uniprot.ttl is older than output/tsv/pdb-uniprot.tsv +## Convert output/tsv/pdb-uniprot.tsv => output/ttl/pdb-uniprot.ttl +< 2023-12-02T04:50:29 pdb-uniprot +togoid-config config/pdb-uniprot convert +> 2023-12-02T04:50:31 pdb-uniprot +### Update TTL for prosite-prosite_prorule if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/prosite-prosite_prorule.ttl is newer than output/tsv/prosite-prosite_prorule.tsv +# => Preserving output/ttl/prosite-prosite_prorule.ttl +### Update TTL for pubchem_compound-atc if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/pubchem_compound-atc.ttl is newer than output/tsv/pubchem_compound-atc.tsv +# => Preserving output/ttl/pubchem_compound-atc.ttl +### Update TTL for pubchem_compound-chebi if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_compound-chebi.ttl is older than output/tsv/pubchem_compound-chebi.tsv +## Convert output/tsv/pubchem_compound-chebi.tsv => output/ttl/pubchem_compound-chebi.ttl +< 2023-12-02T04:50:31 pubchem_compound-chebi +togoid-config config/pubchem_compound-chebi convert +> 2023-12-02T04:50:32 pubchem_compound-chebi +### Update TTL for pubchem_compound-chembl_compound if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_compound-chembl_compound.ttl is older than output/tsv/pubchem_compound-chembl_compound.tsv +## Convert output/tsv/pubchem_compound-chembl_compound.tsv => output/ttl/pubchem_compound-chembl_compound.ttl +< 2023-12-02T04:50:32 pubchem_compound-chembl_compound +togoid-config config/pubchem_compound-chembl_compound convert +> 2023-12-02T04:50:54 pubchem_compound-chembl_compound +### Update TTL for pubchem_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_compound-drugbank.ttl is older than output/tsv/pubchem_compound-drugbank.tsv +## Convert output/tsv/pubchem_compound-drugbank.tsv => output/ttl/pubchem_compound-drugbank.ttl +< 2023-12-02T04:50:54 pubchem_compound-drugbank +togoid-config config/pubchem_compound-drugbank convert +> 2023-12-02T04:50:54 pubchem_compound-drugbank +### Update TTL for pubchem_compound-glytoucan if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_compound-glytoucan.ttl is older than output/tsv/pubchem_compound-glytoucan.tsv +## Convert output/tsv/pubchem_compound-glytoucan.tsv => output/ttl/pubchem_compound-glytoucan.ttl +< 2023-12-02T04:50:54 pubchem_compound-glytoucan +togoid-config config/pubchem_compound-glytoucan convert +> 2023-12-02T04:50:55 pubchem_compound-glytoucan +### Update TTL for pubchem_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/pubchem_compound-inchi_key.ttl is newer than output/tsv/pubchem_compound-inchi_key.tsv +# => Preserving output/ttl/pubchem_compound-inchi_key.ttl +### Update TTL for pubchem_pathway-ncbigene if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_pathway-ncbigene.ttl is older than output/tsv/pubchem_pathway-ncbigene.tsv +## Convert output/tsv/pubchem_pathway-ncbigene.tsv => output/ttl/pubchem_pathway-ncbigene.ttl +< 2023-12-02T04:50:55 pubchem_pathway-ncbigene +togoid-config config/pubchem_pathway-ncbigene convert +> 2023-12-02T04:50:55 pubchem_pathway-ncbigene +### Update TTL for pubchem_pathway-pathbank if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_pathway-pathbank.ttl is older than output/tsv/pubchem_pathway-pathbank.tsv +## Convert output/tsv/pubchem_pathway-pathbank.tsv => output/ttl/pubchem_pathway-pathbank.ttl +< 2023-12-02T04:50:55 pubchem_pathway-pathbank +togoid-config config/pubchem_pathway-pathbank convert +> 2023-12-02T04:50:56 pubchem_pathway-pathbank +### Update TTL for pubchem_pathway-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_pathway-pubchem_compound.ttl is older than output/tsv/pubchem_pathway-pubchem_compound.tsv +## Convert output/tsv/pubchem_pathway-pubchem_compound.tsv => output/ttl/pubchem_pathway-pubchem_compound.ttl +< 2023-12-02T04:50:56 pubchem_pathway-pubchem_compound +togoid-config config/pubchem_pathway-pubchem_compound convert +> 2023-12-02T04:51:06 pubchem_pathway-pubchem_compound +### Update TTL for pubchem_pathway-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_pathway-reactome_pathway.ttl is older than output/tsv/pubchem_pathway-reactome_pathway.tsv +## Convert output/tsv/pubchem_pathway-reactome_pathway.tsv => output/ttl/pubchem_pathway-reactome_pathway.ttl +< 2023-12-02T04:51:06 pubchem_pathway-reactome_pathway +togoid-config config/pubchem_pathway-reactome_pathway convert +> 2023-12-02T04:51:07 pubchem_pathway-reactome_pathway +### Update TTL for pubchem_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_pathway-uniprot.ttl is older than output/tsv/pubchem_pathway-uniprot.tsv +## Convert output/tsv/pubchem_pathway-uniprot.tsv => output/ttl/pubchem_pathway-uniprot.ttl +< 2023-12-02T04:51:07 pubchem_pathway-uniprot +togoid-config config/pubchem_pathway-uniprot convert +> 2023-12-02T04:51:12 pubchem_pathway-uniprot +### Update TTL for pubchem_pathway-wikipathways if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/pubchem_pathway-wikipathways.ttl is older than output/tsv/pubchem_pathway-wikipathways.tsv +## Convert output/tsv/pubchem_pathway-wikipathways.tsv => output/ttl/pubchem_pathway-wikipathways.ttl +< 2023-12-02T04:51:12 pubchem_pathway-wikipathways +togoid-config config/pubchem_pathway-wikipathways convert +> 2023-12-02T04:51:12 pubchem_pathway-wikipathways +### Update TTL for reactome_pathway-chebi if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_pathway-chebi.ttl is newer than output/tsv/reactome_pathway-chebi.tsv +# => Preserving output/ttl/reactome_pathway-chebi.ttl +### Update TTL for reactome_pathway-go if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/reactome_pathway-go.ttl is older than output/tsv/reactome_pathway-go.tsv +## Convert output/tsv/reactome_pathway-go.tsv => output/ttl/reactome_pathway-go.ttl +< 2023-12-02T04:51:12 reactome_pathway-go +togoid-config config/reactome_pathway-go convert +> 2023-12-02T04:51:12 reactome_pathway-go +### Update TTL for reactome_pathway-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_pathway-iuphar_ligand.ttl is newer than output/tsv/reactome_pathway-iuphar_ligand.tsv +# => Preserving output/ttl/reactome_pathway-iuphar_ligand.ttl +### Update TTL for reactome_pathway-mirbase if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_pathway-mirbase.ttl is newer than output/tsv/reactome_pathway-mirbase.tsv +# => Preserving output/ttl/reactome_pathway-mirbase.ttl +### Update TTL for reactome_pathway-reactome_reaction if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/reactome_pathway-reactome_reaction.ttl is older than output/tsv/reactome_pathway-reactome_reaction.tsv +## Convert output/tsv/reactome_pathway-reactome_reaction.tsv => output/ttl/reactome_pathway-reactome_reaction.ttl +< 2023-12-02T04:51:12 reactome_pathway-reactome_reaction +togoid-config config/reactome_pathway-reactome_reaction convert +> 2023-12-02T04:51:16 reactome_pathway-reactome_reaction +### Update TTL for reactome_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_pathway-uniprot.ttl is newer than output/tsv/reactome_pathway-uniprot.tsv +# => Preserving output/ttl/reactome_pathway-uniprot.ttl +### Update TTL for reactome_reaction-chebi if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_reaction-chebi.ttl is newer than output/tsv/reactome_reaction-chebi.tsv +# => Preserving output/ttl/reactome_reaction-chebi.ttl +### Update TTL for reactome_reaction-go if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/reactome_reaction-go.ttl is older than output/tsv/reactome_reaction-go.tsv +## Convert output/tsv/reactome_reaction-go.tsv => output/ttl/reactome_reaction-go.ttl +< 2023-12-02T04:51:16 reactome_reaction-go +togoid-config config/reactome_reaction-go convert +> 2023-12-02T04:51:17 reactome_reaction-go +### Update TTL for reactome_reaction-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_reaction-iuphar_ligand.ttl is newer than output/tsv/reactome_reaction-iuphar_ligand.tsv +# => Preserving output/ttl/reactome_reaction-iuphar_ligand.ttl +### Update TTL for reactome_reaction-mirbase if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_reaction-mirbase.ttl is newer than output/tsv/reactome_reaction-mirbase.tsv +# => Preserving output/ttl/reactome_reaction-mirbase.ttl +### Update TTL for reactome_reaction-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/reactome_reaction-uniprot.ttl is newer than output/tsv/reactome_reaction-uniprot.tsv +# => Preserving output/ttl/reactome_reaction-uniprot.ttl +### Update TTL for refseq_protein-uniprot if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/refseq_protein-uniprot.ttl is older than output/tsv/refseq_protein-uniprot.tsv +## Convert output/tsv/refseq_protein-uniprot.tsv => output/ttl/refseq_protein-uniprot.ttl +< 2023-12-02T04:51:17 refseq_protein-uniprot +togoid-config config/refseq_protein-uniprot convert +> 2023-12-02T05:54:00 refseq_protein-uniprot +### Update TTL for refseq_rna-dbsnp if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/refseq_rna-dbsnp.ttl is newer than output/tsv/refseq_rna-dbsnp.tsv +# => Preserving output/ttl/refseq_rna-dbsnp.ttl +### Update TTL for refseq_rna-hgnc if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/refseq_rna-hgnc.ttl is newer than output/tsv/refseq_rna-hgnc.tsv +# => Preserving output/ttl/refseq_rna-hgnc.ttl +### Update TTL for refseq_rna-ncbigene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/refseq_rna-ncbigene.ttl is newer than output/tsv/refseq_rna-ncbigene.tsv +# => Preserving output/ttl/refseq_rna-ncbigene.ttl +### Update TTL for refseq_rna-omim_gene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/refseq_rna-omim_gene.ttl is newer than output/tsv/refseq_rna-omim_gene.tsv +# => Preserving output/ttl/refseq_rna-omim_gene.ttl +### Update TTL for refseq_rna-pubmed if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/refseq_rna-pubmed.ttl is newer than output/tsv/refseq_rna-pubmed.tsv +# => Preserving output/ttl/refseq_rna-pubmed.ttl +### Update TTL for refseq_rna-refseq_protein if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/refseq_rna-refseq_protein.ttl is newer than output/tsv/refseq_rna-refseq_protein.tsv +# => Preserving output/ttl/refseq_rna-refseq_protein.ttl +### Update TTL for refseq_rna-taxonomy if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/refseq_rna-taxonomy.ttl is newer than output/tsv/refseq_rna-taxonomy.tsv +# => Preserving output/ttl/refseq_rna-taxonomy.ttl +### Update TTL for rhea-chebi if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/rhea-chebi.ttl is newer than output/tsv/rhea-chebi.tsv +# => Preserving output/ttl/rhea-chebi.ttl +### Update TTL for rhea-ec if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/rhea-ec.ttl is newer than output/tsv/rhea-ec.tsv +# => Preserving output/ttl/rhea-ec.ttl +### Update TTL for rhea-go if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/rhea-go.ttl is newer than output/tsv/rhea-go.tsv +# => Preserving output/ttl/rhea-go.ttl +### Update TTL for rhea-pubmed if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/rhea-pubmed.ttl is newer than output/tsv/rhea-pubmed.tsv +# => Preserving output/ttl/rhea-pubmed.ttl +### Update TTL for rhea-reactome_reaction if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/rhea-reactome_reaction.ttl is newer than output/tsv/rhea-reactome_reaction.tsv +# => Preserving output/ttl/rhea-reactome_reaction.ttl +### Update TTL for rhea-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/rhea-uniprot.ttl is newer than output/tsv/rhea-uniprot.tsv +# => Preserving output/ttl/rhea-uniprot.ttl +### Update TTL for sra_accession-bioproject if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_accession-bioproject.ttl is newer than output/tsv/sra_accession-bioproject.tsv +# => Preserving output/ttl/sra_accession-bioproject.ttl +### Update TTL for sra_accession-biosample if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_accession-biosample.ttl is newer than output/tsv/sra_accession-biosample.tsv +# => Preserving output/ttl/sra_accession-biosample.ttl +### Update TTL for sra_accession-sra_analysis if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_accession-sra_analysis.ttl is newer than output/tsv/sra_accession-sra_analysis.tsv +# => Preserving output/ttl/sra_accession-sra_analysis.ttl +### Update TTL for sra_accession-sra_experiment if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_accession-sra_experiment.ttl is newer than output/tsv/sra_accession-sra_experiment.tsv +# => Preserving output/ttl/sra_accession-sra_experiment.ttl +### Update TTL for sra_accession-sra_project if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_accession-sra_project.ttl is newer than output/tsv/sra_accession-sra_project.tsv +# => Preserving output/ttl/sra_accession-sra_project.ttl +### Update TTL for sra_accession-sra_run if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_accession-sra_run.ttl is newer than output/tsv/sra_accession-sra_run.tsv +# => Preserving output/ttl/sra_accession-sra_run.ttl +### Update TTL for sra_accession-sra_sample if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_accession-sra_sample.ttl is newer than output/tsv/sra_accession-sra_sample.tsv +# => Preserving output/ttl/sra_accession-sra_sample.ttl +### Update TTL for sra_experiment-bioproject if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_experiment-bioproject.ttl is newer than output/tsv/sra_experiment-bioproject.tsv +# => Preserving output/ttl/sra_experiment-bioproject.ttl +### Update TTL for sra_experiment-biosample if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_experiment-biosample.ttl is newer than output/tsv/sra_experiment-biosample.tsv +# => Preserving output/ttl/sra_experiment-biosample.ttl +### Update TTL for sra_experiment-sra_project if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_experiment-sra_project.ttl is newer than output/tsv/sra_experiment-sra_project.tsv +# => Preserving output/ttl/sra_experiment-sra_project.ttl +### Update TTL for sra_experiment-sra_sample if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_experiment-sra_sample.ttl is newer than output/tsv/sra_experiment-sra_sample.tsv +# => Preserving output/ttl/sra_experiment-sra_sample.ttl +### Update TTL for sra_project-bioproject if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_project-bioproject.ttl is newer than output/tsv/sra_project-bioproject.tsv +# => Preserving output/ttl/sra_project-bioproject.ttl +### Update TTL for sra_run-bioproject if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_run-bioproject.ttl is newer than output/tsv/sra_run-bioproject.tsv +# => Preserving output/ttl/sra_run-bioproject.ttl +### Update TTL for sra_run-biosample if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_run-biosample.ttl is newer than output/tsv/sra_run-biosample.tsv +# => Preserving output/ttl/sra_run-biosample.ttl +### Update TTL for sra_run-sra_experiment if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_run-sra_experiment.ttl is newer than output/tsv/sra_run-sra_experiment.tsv +# => Preserving output/ttl/sra_run-sra_experiment.ttl +### Update TTL for sra_run-sra_project if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_run-sra_project.ttl is newer than output/tsv/sra_run-sra_project.tsv +# => Preserving output/ttl/sra_run-sra_project.ttl +### Update TTL for sra_run-sra_sample if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_run-sra_sample.ttl is newer than output/tsv/sra_run-sra_sample.tsv +# => Preserving output/ttl/sra_run-sra_sample.ttl +### Update TTL for sra_sample-biosample if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/sra_sample-biosample.ttl is newer than output/tsv/sra_sample-biosample.tsv +# => Preserving output/ttl/sra_sample-biosample.ttl +### Update TTL for swisslipids-chebi if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/swisslipids-chebi.ttl is older than output/tsv/swisslipids-chebi.tsv +## Convert output/tsv/swisslipids-chebi.tsv => output/ttl/swisslipids-chebi.ttl +< 2023-12-02T05:54:01 swisslipids-chebi +togoid-config config/swisslipids-chebi convert +> 2023-12-02T05:54:02 swisslipids-chebi +### Update TTL for swisslipids-hmdb if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/swisslipids-hmdb.ttl is older than output/tsv/swisslipids-hmdb.tsv +## Convert output/tsv/swisslipids-hmdb.tsv => output/ttl/swisslipids-hmdb.ttl +< 2023-12-02T05:54:02 swisslipids-hmdb +togoid-config config/swisslipids-hmdb convert +> 2023-12-02T05:54:02 swisslipids-hmdb +### Update TTL for swisslipids-inchi_key if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/swisslipids-inchi_key.ttl is older than output/tsv/swisslipids-inchi_key.tsv +## Convert output/tsv/swisslipids-inchi_key.tsv => output/ttl/swisslipids-inchi_key.ttl +< 2023-12-02T05:54:02 swisslipids-inchi_key +togoid-config config/swisslipids-inchi_key convert +> 2023-12-02T05:54:08 swisslipids-inchi_key +### Update TTL for taxonomy-pubmed if check_ttl_filesize false or check_ttl_timestamp true +# File output/ttl/taxonomy-pubmed.ttl is older than output/tsv/taxonomy-pubmed.tsv +## Convert output/tsv/taxonomy-pubmed.tsv => output/ttl/taxonomy-pubmed.ttl +< 2023-12-02T05:54:08 taxonomy-pubmed +togoid-config config/taxonomy-pubmed convert +> 2023-12-02T05:54:08 taxonomy-pubmed +### Update TTL for togovar-clinvar if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-clinvar.ttl is newer than output/tsv/togovar-clinvar.tsv +# => Preserving output/ttl/togovar-clinvar.ttl +### Update TTL for togovar-dbsnp if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-dbsnp.ttl is newer than output/tsv/togovar-dbsnp.tsv +# => Preserving output/ttl/togovar-dbsnp.ttl +### Update TTL for togovar-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-ensembl_gene.ttl is newer than output/tsv/togovar-ensembl_gene.tsv +# => Preserving output/ttl/togovar-ensembl_gene.ttl +### Update TTL for togovar-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-ensembl_transcript.ttl is newer than output/tsv/togovar-ensembl_transcript.tsv +# => Preserving output/ttl/togovar-ensembl_transcript.ttl +### Update TTL for togovar-hgnc if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-hgnc.ttl is newer than output/tsv/togovar-hgnc.tsv +# => Preserving output/ttl/togovar-hgnc.ttl +### Update TTL for togovar-ncbigene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-ncbigene.ttl is newer than output/tsv/togovar-ncbigene.tsv +# => Preserving output/ttl/togovar-ncbigene.ttl +### Update TTL for togovar-pubmed if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-pubmed.ttl is newer than output/tsv/togovar-pubmed.tsv +# => Preserving output/ttl/togovar-pubmed.ttl +### Update TTL for togovar-refseq_rna if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/togovar-refseq_rna.ttl is newer than output/tsv/togovar-refseq_rna.tsv +# => Preserving output/ttl/togovar-refseq_rna.ttl +### Update TTL for uberon-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uberon-ncit_tissue.ttl is newer than output/tsv/uberon-ncit_tissue.tsv +# => Preserving output/ttl/uberon-ncit_tissue.ttl +### Update TTL for uniprot-chembl_target if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-chembl_target.ttl is newer than output/tsv/uniprot-chembl_target.tsv +# => Preserving output/ttl/uniprot-chembl_target.ttl +### Update TTL for uniprot-dbsnp if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-dbsnp.ttl is newer than output/tsv/uniprot-dbsnp.tsv +# => Preserving output/ttl/uniprot-dbsnp.ttl +### Update TTL for uniprot-ec if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-ec.ttl is newer than output/tsv/uniprot-ec.tsv +# => Preserving output/ttl/uniprot-ec.ttl +### Update TTL for uniprot-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-ensembl_gene.ttl is newer than output/tsv/uniprot-ensembl_gene.tsv +# => Preserving output/ttl/uniprot-ensembl_gene.ttl +### Update TTL for uniprot-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-ensembl_protein.ttl is newer than output/tsv/uniprot-ensembl_protein.tsv +# => Preserving output/ttl/uniprot-ensembl_protein.ttl +### Update TTL for uniprot-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-ensembl_transcript.ttl is newer than output/tsv/uniprot-ensembl_transcript.tsv +# => Preserving output/ttl/uniprot-ensembl_transcript.ttl +### Update TTL for uniprot-go if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-go.ttl is newer than output/tsv/uniprot-go.tsv +# => Preserving output/ttl/uniprot-go.ttl +### Update TTL for uniprot-hgnc if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-hgnc.ttl is newer than output/tsv/uniprot-hgnc.tsv +# => Preserving output/ttl/uniprot-hgnc.ttl +### Update TTL for uniprot-insdc if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-insdc.ttl is newer than output/tsv/uniprot-insdc.tsv +# => Preserving output/ttl/uniprot-insdc.ttl +### Update TTL for uniprot-intact if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-intact.ttl is newer than output/tsv/uniprot-intact.tsv +# => Preserving output/ttl/uniprot-intact.ttl +### Update TTL for uniprot-ncbigene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-ncbigene.ttl is newer than output/tsv/uniprot-ncbigene.tsv +# => Preserving output/ttl/uniprot-ncbigene.ttl +### Update TTL for uniprot-oma_group if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-oma_group.ttl is newer than output/tsv/uniprot-oma_group.tsv +# => Preserving output/ttl/uniprot-oma_group.ttl +### Update TTL for uniprot-omim_gene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-omim_gene.ttl is newer than output/tsv/uniprot-omim_gene.tsv +# => Preserving output/ttl/uniprot-omim_gene.ttl +### Update TTL for uniprot-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-omim_phenotype.ttl is newer than output/tsv/uniprot-omim_phenotype.tsv +# => Preserving output/ttl/uniprot-omim_phenotype.ttl +### Update TTL for uniprot-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-orphanet_phenotype.ttl is newer than output/tsv/uniprot-orphanet_phenotype.tsv +# => Preserving output/ttl/uniprot-orphanet_phenotype.ttl +### Update TTL for uniprot-pdb if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-pdb.ttl is newer than output/tsv/uniprot-pdb.tsv +# => Preserving output/ttl/uniprot-pdb.ttl +### Update TTL for uniprot-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-reactome_pathway.ttl is newer than output/tsv/uniprot-reactome_pathway.tsv +# => Preserving output/ttl/uniprot-reactome_pathway.ttl +### Update TTL for uniprot-refseq_protein if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-refseq_protein.ttl is newer than output/tsv/uniprot-refseq_protein.tsv +# => Preserving output/ttl/uniprot-refseq_protein.ttl +### Update TTL for uniprot-uniprot_mnemonic if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot-uniprot_mnemonic.ttl is newer than output/tsv/uniprot-uniprot_mnemonic.tsv +# => Preserving output/ttl/uniprot-uniprot_mnemonic.ttl +### Update TTL for uniprot_reference_proteome-assembly_insdc if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot_reference_proteome-assembly_insdc.ttl is newer than output/tsv/uniprot_reference_proteome-assembly_insdc.tsv +# => Preserving output/ttl/uniprot_reference_proteome-assembly_insdc.ttl +### Update TTL for uniprot_reference_proteome-assembly_refseq if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot_reference_proteome-assembly_refseq.ttl is newer than output/tsv/uniprot_reference_proteome-assembly_refseq.tsv +# => Preserving output/ttl/uniprot_reference_proteome-assembly_refseq.ttl +### Update TTL for uniprot_reference_proteome-taxonomy if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/uniprot_reference_proteome-taxonomy.ttl is newer than output/tsv/uniprot_reference_proteome-taxonomy.tsv +# => Preserving output/ttl/uniprot_reference_proteome-taxonomy.ttl +### Update TTL for wikipathways-chebi if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/wikipathways-chebi.ttl is newer than output/tsv/wikipathways-chebi.tsv +# => Preserving output/ttl/wikipathways-chebi.ttl +### Update TTL for wikipathways-doid if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/wikipathways-doid.ttl is newer than output/tsv/wikipathways-doid.tsv +# => Preserving output/ttl/wikipathways-doid.ttl +### Update TTL for wikipathways-hmdb if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/wikipathways-hmdb.ttl is newer than output/tsv/wikipathways-hmdb.tsv +# => Preserving output/ttl/wikipathways-hmdb.ttl +### Update TTL for wikipathways-lipidmaps if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/wikipathways-lipidmaps.ttl is newer than output/tsv/wikipathways-lipidmaps.tsv +# => Preserving output/ttl/wikipathways-lipidmaps.ttl +### Update TTL for wikipathways-ncbigene if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/wikipathways-ncbigene.ttl is newer than output/tsv/wikipathways-ncbigene.tsv +# => Preserving output/ttl/wikipathways-ncbigene.ttl +### Update TTL for wikipathways-uniprot if check_ttl_filesize false or check_ttl_timestamp false +# File output/ttl/wikipathways-uniprot.ttl is newer than output/tsv/wikipathways-uniprot.tsv +# => Preserving output/ttl/wikipathways-uniprot.ttl +Rule for TTL (output/ttl/bioproject-biosample.ttl) ------------------------------ -Investigating output/ttl/jga_study-jga_dataset.ttl +Investigating output/ttl/bioproject-biosample.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 05:07:46 +0900 +timestamp: 2023-12-02 02:55:34 +0900 pre-requisites: --output/ttl/ () ---output/tsv/jga_study-jga_dataset.tsv (2023-11-18 00:50:37 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/bioproject-biosample.tsv (2023-12-01 17:49:03 +0900) +latest-prerequisite time: 2023-12-01 17:49:03 +0900 ................................ -Rule for TTL (output/ttl/jga_study-nbdc_human_db.ttl) +Rule for TTL (output/ttl/bioproject-geo_series.ttl) ------------------------------ -Investigating output/ttl/jga_study-nbdc_human_db.ttl +Investigating output/ttl/bioproject-geo_series.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 05:07:46 +0900 +timestamp: 2023-12-02 02:55:36 +0900 pre-requisites: --output/ttl/ () ---output/tsv/jga_study-nbdc_human_db.tsv (2023-11-18 00:50:38 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/bioproject-geo_series.tsv (2023-12-01 17:49:05 +0900) +latest-prerequisite time: 2023-12-01 17:49:05 +0900 ................................ -Rule for TTL (output/ttl/jga_study-pubmed.ttl) +Rule for TTL (output/ttl/bioproject-pubmed.ttl) ------------------------------ -Investigating output/ttl/jga_study-pubmed.ttl +Investigating output/ttl/bioproject-pubmed.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 05:07:46 +0900 +timestamp: 2023-12-02 02:55:39 +0900 pre-requisites: --output/ttl/ () ---output/tsv/jga_study-pubmed.tsv (2023-11-18 00:50:38 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/bioproject-pubmed.tsv (2023-12-01 17:49:06 +0900) +latest-prerequisite time: 2023-12-01 17:49:06 +0900 ................................ -Rule for TTL (output/ttl/medgen-hp_phenotype.ttl) +Rule for TTL (output/ttl/bioproject_umbrella-bioproject.ttl) ------------------------------ -Investigating output/ttl/medgen-hp_phenotype.ttl +Investigating output/ttl/bioproject_umbrella-bioproject.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:30 +0900 +timestamp: 2023-12-02 02:55:40 +0900 pre-requisites: --output/ttl/ () ---output/tsv/medgen-hp_phenotype.tsv (2023-11-18 01:30:50 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/bioproject_umbrella-bioproject.tsv (2023-12-01 17:49:07 +0900) +latest-prerequisite time: 2023-12-01 17:49:07 +0900 ................................ -Rule for TTL (output/ttl/medgen-mesh.ttl) +Rule for TTL (output/ttl/cellosaurus-ncit_disease.ttl) ------------------------------ -Investigating output/ttl/medgen-mesh.ttl +Investigating output/ttl/cellosaurus-ncit_disease.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:30 +0900 +timestamp: 2023-10-06 20:59:11 +0900 pre-requisites: --output/ttl/ () ---output/tsv/medgen-mesh.tsv (2023-11-18 01:30:51 +0900) +--output/tsv/cellosaurus-ncit_disease.tsv (2023-10-06 17:40:53 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/medgen-mondo.ttl) +Rule for TTL (output/ttl/cellosaurus-orphanet_phenotype.ttl) ------------------------------ -Investigating output/ttl/medgen-mondo.ttl +Investigating output/ttl/cellosaurus-orphanet_phenotype.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:30 +0900 +timestamp: 2023-10-06 20:59:12 +0900 pre-requisites: --output/ttl/ () ---output/tsv/medgen-mondo.tsv (2023-11-18 01:30:51 +0900) +--output/tsv/cellosaurus-orphanet_phenotype.tsv (2023-10-06 17:40:56 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/medgen-ncbigene.ttl) +Rule for TTL (output/ttl/chembl_target-ensembl_gene.ttl) ------------------------------ -Investigating output/ttl/medgen-ncbigene.ttl +Investigating output/ttl/chembl_target-ensembl_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:31 +0900 +timestamp: 2023-08-25 22:09:29 +0900 pre-requisites: --output/ttl/ () ---output/tsv/medgen-ncbigene.tsv (2023-11-18 01:30:52 +0900) +--output/tsv/chembl_target-ensembl_gene.tsv (2023-08-25 17:59:01 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/medgen-omim_phenotype.ttl) +Rule for TTL (output/ttl/cog-insdc.ttl) ------------------------------ -Investigating output/ttl/medgen-omim_phenotype.ttl +Investigating output/ttl/cog-insdc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:31 +0900 +timestamp: 2023-07-28 22:03:15 +0900 pre-requisites: --output/ttl/ () ---output/tsv/medgen-omim_phenotype.tsv (2023-11-18 01:30:52 +0900) +--output/tsv/cog-insdc.tsv (2023-07-28 17:55:29 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/medgen-orphanet_phenotype.ttl) +Rule for TTL (output/ttl/cog-refseq_protein.ttl) ------------------------------ -Investigating output/ttl/medgen-orphanet_phenotype.ttl +Investigating output/ttl/cog-refseq_protein.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:31 +0900 +timestamp: 2023-07-28 22:03:44 +0900 pre-requisites: --output/ttl/ () ---output/tsv/medgen-orphanet_phenotype.tsv (2023-11-18 01:30:53 +0900) +--output/tsv/cog-refseq_protein.tsv (2023-07-28 17:55:40 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/mgi_gene-ensembl_gene.ttl) ------------------------------- -Investigating output/ttl/mgi_gene-ensembl_gene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 15:04:00 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_gene-ensembl_gene.tsv (2023-11-27 11:57:58 +0900) -latest-prerequisite time: 2023-11-27 11:57:58 +0900 -................................ - -Rule for TTL (output/ttl/mgi_gene-hgnc.ttl) ------------------------------- -Investigating output/ttl/mgi_gene-hgnc.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 15:04:00 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_gene-hgnc.tsv (2023-11-27 11:57:59 +0900) -latest-prerequisite time: 2023-11-27 11:57:59 +0900 -................................ - -Rule for TTL (output/ttl/mgi_gene-mgi_allele.ttl) ------------------------------- -Investigating output/ttl/mgi_gene-mgi_allele.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 15:04:01 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_gene-mgi_allele.tsv (2023-11-27 11:58:00 +0900) -latest-prerequisite time: 2023-11-27 11:58:00 +0900 -................................ - -Rule for TTL (output/ttl/mgi_gene-ncbigene.ttl) ------------------------------- -Investigating output/ttl/mgi_gene-ncbigene.ttl -class: Rake::FileTask -task needed: true -timestamp: 2023-11-27 15:04:02 +0900 -pre-requisites: ---output/ttl/ () ---config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_gene-ncbigene.tsv (2023-11-27 11:58:00 +0900) -latest-prerequisite time: 2023-11-27 11:58:00 +0900 -................................ - -Rule for TTL (output/ttl/mgi_gene-uniprot.ttl) +Rule for TTL (output/ttl/ensembl_gene-affy_probeset.ttl) ------------------------------ -Investigating output/ttl/mgi_gene-uniprot.ttl +Investigating output/ttl/ensembl_gene-affy_probeset.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:04:03 +0900 +timestamp: 2023-12-02 02:57:40 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_gene-uniprot.tsv (2023-11-27 11:58:01 +0900) -latest-prerequisite time: 2023-11-27 11:58:01 +0900 +--output/tsv/ensembl_gene-affy_probeset.tsv (2023-12-01 18:06:48 +0900) +latest-prerequisite time: 2023-12-01 18:06:48 +0900 ................................ -Rule for TTL (output/ttl/mgi_genotype-doid.ttl) +Rule for TTL (output/ttl/ensembl_gene-ensembl_protein.ttl) ------------------------------ -Investigating output/ttl/mgi_genotype-doid.ttl +Investigating output/ttl/ensembl_gene-ensembl_protein.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:04:03 +0900 +timestamp: 2023-12-02 02:59:31 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_genotype-doid.tsv (2023-11-27 11:58:02 +0900) -latest-prerequisite time: 2023-11-27 11:58:02 +0900 +--output/tsv/ensembl_gene-ensembl_protein.tsv (2023-12-01 18:08:35 +0900) +latest-prerequisite time: 2023-12-01 18:08:35 +0900 ................................ -Rule for TTL (output/ttl/mgi_genotype-mgi_allele.ttl) +Rule for TTL (output/ttl/ensembl_gene-ensembl_transcript.ttl) ------------------------------ -Investigating output/ttl/mgi_genotype-mgi_allele.ttl +Investigating output/ttl/ensembl_gene-ensembl_transcript.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:04:04 +0900 +timestamp: 2023-12-02 03:01:48 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_genotype-mgi_allele.tsv (2023-11-27 11:58:04 +0900) -latest-prerequisite time: 2023-11-27 11:58:04 +0900 +--output/tsv/ensembl_gene-ensembl_transcript.tsv (2023-12-01 18:10:35 +0900) +latest-prerequisite time: 2023-12-01 18:10:35 +0900 ................................ -Rule for TTL (output/ttl/mgi_genotype-mp.ttl) +Rule for TTL (output/ttl/ensembl_gene-hgnc.ttl) ------------------------------ -Investigating output/ttl/mgi_genotype-mp.ttl +Investigating output/ttl/ensembl_gene-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:04:08 +0900 +timestamp: 2023-12-02 03:01:50 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/mgi_genotype-mp.tsv (2023-11-27 11:58:06 +0900) -latest-prerequisite time: 2023-11-27 11:58:06 +0900 +--output/tsv/ensembl_gene-hgnc.tsv (2023-12-01 18:10:36 +0900) +latest-prerequisite time: 2023-12-01 18:10:36 +0900 ................................ -Rule for TTL (output/ttl/mondo-doid.ttl) +Rule for TTL (output/ttl/ensembl_gene-ncbigene.ttl) ------------------------------ -Investigating output/ttl/mondo-doid.ttl +Investigating output/ttl/ensembl_gene-ncbigene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:39 +0900 +timestamp: 2023-12-02 03:02:45 +0900 pre-requisites: --output/ttl/ () ---output/tsv/mondo-doid.tsv (2023-11-18 01:31:02 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ensembl_gene-ncbigene.tsv (2023-12-01 18:11:57 +0900) +latest-prerequisite time: 2023-12-01 18:11:57 +0900 ................................ -Rule for TTL (output/ttl/mondo-hp_phenotype.ttl) +Rule for TTL (output/ttl/ensembl_gene-uniprot.ttl) ------------------------------ -Investigating output/ttl/mondo-hp_phenotype.ttl +Investigating output/ttl/ensembl_gene-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:39 +0900 +timestamp: 2023-12-02 03:03:28 +0900 pre-requisites: --output/ttl/ () ---output/tsv/mondo-hp_phenotype.tsv (2023-11-18 01:31:03 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ensembl_gene-uniprot.tsv (2023-12-01 18:14:25 +0900) +latest-prerequisite time: 2023-12-01 18:14:25 +0900 ................................ -Rule for TTL (output/ttl/mondo-meddra.ttl) +Rule for TTL (output/ttl/ensembl_protein-ensembl_transcript.ttl) ------------------------------ -Investigating output/ttl/mondo-meddra.ttl +Investigating output/ttl/ensembl_protein-ensembl_transcript.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:39 +0900 +timestamp: 2023-12-02 03:05:20 +0900 pre-requisites: --output/ttl/ () ---output/tsv/mondo-meddra.tsv (2023-11-18 01:31:03 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ensembl_protein-ensembl_transcript.tsv (2023-12-01 18:26:32 +0900) +latest-prerequisite time: 2023-12-01 18:26:32 +0900 ................................ -Rule for TTL (output/ttl/mondo-mesh.ttl) +Rule for TTL (output/ttl/ensembl_transcript-affy_probeset.ttl) ------------------------------ -Investigating output/ttl/mondo-mesh.ttl +Investigating output/ttl/ensembl_transcript-affy_probeset.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:40 +0900 +timestamp: 2023-12-02 03:05:23 +0900 pre-requisites: --output/ttl/ () ---output/tsv/mondo-mesh.tsv (2023-11-18 01:31:04 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ensembl_transcript-affy_probeset.tsv (2023-12-01 18:27:45 +0900) +latest-prerequisite time: 2023-12-01 18:27:45 +0900 ................................ -Rule for TTL (output/ttl/mondo-omim_phenotype.ttl) +Rule for TTL (output/ttl/ensembl_transcript-go.ttl) ------------------------------ -Investigating output/ttl/mondo-omim_phenotype.ttl +Investigating output/ttl/ensembl_transcript-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:40 +0900 +timestamp: 2023-12-02 03:16:23 +0900 pre-requisites: --output/ttl/ () ---output/tsv/mondo-omim_phenotype.tsv (2023-11-18 01:31:04 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ensembl_transcript-go.tsv (2023-12-02 01:51:21 +0900) +latest-prerequisite time: 2023-12-02 01:51:21 +0900 ................................ -Rule for TTL (output/ttl/mondo-orphanet_phenotype.ttl) +Rule for TTL (output/ttl/ensembl_transcript-hgnc.ttl) ------------------------------ -Investigating output/ttl/mondo-orphanet_phenotype.ttl +Investigating output/ttl/ensembl_transcript-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:40 +0900 +timestamp: 2023-12-02 03:16:27 +0900 pre-requisites: --output/ttl/ () ---output/tsv/mondo-orphanet_phenotype.tsv (2023-11-18 01:31:04 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ensembl_transcript-hgnc.tsv (2023-12-02 01:51:27 +0900) +latest-prerequisite time: 2023-12-02 01:51:27 +0900 ................................ -Rule for TTL (output/ttl/nando-mondo.ttl) +Rule for TTL (output/ttl/ensembl_transcript-refseq_rna.ttl) ------------------------------ -Investigating output/ttl/nando-mondo.ttl +Investigating output/ttl/ensembl_transcript-refseq_rna.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:01:41 +0900 +timestamp: 2023-12-02 03:17:55 +0900 pre-requisites: --output/ttl/ () ---output/tsv/nando-mondo.tsv (2023-11-18 01:31:05 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ensembl_transcript-refseq_rna.tsv (2023-12-02 02:05:36 +0900) +latest-prerequisite time: 2023-12-02 02:05:36 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-ensembl_gene.ttl) +Rule for TTL (output/ttl/hmdb-chebi.ttl) ------------------------------ -Investigating output/ttl/ncbigene-ensembl_gene.ttl +Investigating output/ttl/hmdb-chebi.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:05:24 +0900 +timestamp: 2023-07-08 10:23:14 +0900 pre-requisites: --output/ttl/ () +--output/tsv/hmdb-chebi.tsv (2023-07-03 13:03:28 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-ensembl_gene.tsv (2023-11-27 11:58:37 +0900) -latest-prerequisite time: 2023-11-27 11:58:37 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-ensembl_protein.ttl) +Rule for TTL (output/ttl/hmdb-inchi_key.ttl) ------------------------------ -Investigating output/ttl/ncbigene-ensembl_protein.ttl +Investigating output/ttl/hmdb-inchi_key.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:07:05 +0900 +timestamp: 2023-07-08 10:23:16 +0900 pre-requisites: --output/ttl/ () +--output/tsv/hmdb-inchi_key.tsv (2023-07-03 13:03:51 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-ensembl_protein.tsv (2023-11-27 11:59:36 +0900) -latest-prerequisite time: 2023-11-27 11:59:36 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-ensembl_transcript.ttl) +Rule for TTL (output/ttl/hmdb-pdb_ccd.ttl) ------------------------------ -Investigating output/ttl/ncbigene-ensembl_transcript.ttl +Investigating output/ttl/hmdb-pdb_ccd.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:08:40 +0900 +timestamp: 2023-07-08 10:23:16 +0900 pre-requisites: --output/ttl/ () +--output/tsv/hmdb-pdb_ccd.tsv (2023-07-03 13:06:37 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-ensembl_transcript.tsv (2023-11-27 12:00:29 +0900) -latest-prerequisite time: 2023-11-27 12:00:29 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-flybase_gene.ttl) +Rule for TTL (output/ttl/hmdb-pubchem_compound.ttl) ------------------------------ -Investigating output/ttl/ncbigene-flybase_gene.ttl +Investigating output/ttl/hmdb-pubchem_compound.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:08:41 +0900 +timestamp: 2023-07-08 10:23:17 +0900 pre-requisites: --output/ttl/ () +--output/tsv/hmdb-pubchem_compound.tsv (2023-07-03 13:06:27 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-flybase_gene.tsv (2023-11-27 12:01:39 +0900) -latest-prerequisite time: 2023-11-27 12:01:39 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-go.ttl) +Rule for TTL (output/ttl/homologene-ncbigene.ttl) ------------------------------ -Investigating output/ttl/ncbigene-go.ttl +Investigating output/ttl/homologene-ncbigene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:16:56 +0900 +timestamp: 2023-06-02 20:54:15 +0900 pre-requisites: --output/ttl/ () +--output/tsv/homologene-ncbigene.tsv (2023-06-02 19:58:16 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-go.tsv (2023-11-27 12:03:57 +0900) -latest-prerequisite time: 2023-11-27 12:03:57 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-hgnc.ttl) +Rule for TTL (output/ttl/hp_phenotype-omim_phenotype.ttl) ------------------------------ -Investigating output/ttl/ncbigene-hgnc.ttl +Investigating output/ttl/hp_phenotype-omim_phenotype.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:17:00 +0900 +timestamp: 2023-10-20 21:56:05 +0900 pre-requisites: --output/ttl/ () +--output/tsv/hp_phenotype-omim_phenotype.tsv (2023-10-16 09:24:24 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-hgnc.tsv (2023-11-27 12:03:58 +0900) -latest-prerequisite time: 2023-11-27 12:03:58 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-mgi_gene.ttl) +Rule for TTL (output/ttl/hp_phenotype-orphanet_phenotype.ttl) ------------------------------ -Investigating output/ttl/ncbigene-mgi_gene.ttl +Investigating output/ttl/hp_phenotype-orphanet_phenotype.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:17:02 +0900 +timestamp: 2023-10-13 21:27:24 +0900 pre-requisites: --output/ttl/ () +--output/tsv/hp_phenotype-orphanet_phenotype.tsv (2023-10-13 18:16:38 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-mgi_gene.tsv (2023-11-27 12:04:54 +0900) -latest-prerequisite time: 2023-11-27 12:04:54 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-mirbase.ttl) +Rule for TTL (output/ttl/interpro-go.ttl) ------------------------------ -Investigating output/ttl/ncbigene-mirbase.ttl +Investigating output/ttl/interpro-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:17:03 +0900 +timestamp: 2023-11-13 04:43:48 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-go.tsv (2023-11-12 10:20:00 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-mirbase.tsv (2023-11-27 12:06:26 +0900) -latest-prerequisite time: 2023-11-27 12:06:26 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-omim_gene.ttl) +Rule for TTL (output/ttl/interpro-pdb.ttl) ------------------------------ -Investigating output/ttl/ncbigene-omim_gene.ttl +Investigating output/ttl/interpro-pdb.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:17:04 +0900 +timestamp: 2023-11-13 04:43:58 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-pdb.tsv (2023-11-12 10:20:03 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-omim_gene.tsv (2023-11-27 12:06:27 +0900) -latest-prerequisite time: 2023-11-27 12:06:27 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-refseq_genomic.ttl) +Rule for TTL (output/ttl/interpro-pfam.ttl) ------------------------------ -Investigating output/ttl/ncbigene-refseq_genomic.ttl +Investigating output/ttl/interpro-pfam.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:17:07 +0900 +timestamp: 2023-11-13 04:43:59 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-pfam.tsv (2023-11-12 10:20:04 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-refseq_genomic.tsv (2023-11-27 12:22:04 +0900) -latest-prerequisite time: 2023-11-27 12:22:04 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-refseq_protein.ttl) +Rule for TTL (output/ttl/interpro-prosite.ttl) ------------------------------ -Investigating output/ttl/ncbigene-refseq_protein.ttl +Investigating output/ttl/interpro-prosite.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:29:57 +0900 +timestamp: 2023-11-13 04:43:59 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-prosite.tsv (2023-11-12 10:20:06 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-refseq_protein.tsv (2023-11-27 12:26:19 +0900) -latest-prerequisite time: 2023-11-27 12:26:19 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-refseq_rna.ttl) +Rule for TTL (output/ttl/interpro-pubmed.ttl) ------------------------------ -Investigating output/ttl/ncbigene-refseq_rna.ttl +Investigating output/ttl/interpro-pubmed.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:40:07 +0900 +timestamp: 2023-11-13 04:44:00 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-pubmed.tsv (2023-11-12 10:20:08 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-refseq_rna.tsv (2023-11-27 12:29:54 +0900) -latest-prerequisite time: 2023-11-27 12:29:54 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-rgd.ttl) +Rule for TTL (output/ttl/interpro-reactome_pathway.ttl) ------------------------------ -Investigating output/ttl/ncbigene-rgd.ttl +Investigating output/ttl/interpro-reactome_pathway.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:40:11 +0900 +timestamp: 2023-11-13 04:44:05 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-reactome_pathway.tsv (2023-11-12 10:20:10 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-rgd.tsv (2023-11-27 12:30:49 +0900) -latest-prerequisite time: 2023-11-27 12:30:49 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-sgd.ttl) +Rule for TTL (output/ttl/interpro-smart.ttl) ------------------------------ -Investigating output/ttl/ncbigene-sgd.ttl +Investigating output/ttl/interpro-smart.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:40:11 +0900 +timestamp: 2023-11-13 04:44:05 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-smart.tsv (2023-11-12 10:20:11 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-sgd.tsv (2023-11-27 12:31:56 +0900) -latest-prerequisite time: 2023-11-27 12:31:56 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-tair.ttl) +Rule for TTL (output/ttl/interpro-uniprot.ttl) ------------------------------ -Investigating output/ttl/ncbigene-tair.ttl +Investigating output/ttl/interpro-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:40:12 +0900 +timestamp: 2023-11-13 09:02:47 +0900 pre-requisites: --output/ttl/ () +--output/tsv/interpro-uniprot.tsv (2023-11-12 14:10:18 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-tair.tsv (2023-11-27 12:33:01 +0900) -latest-prerequisite time: 2023-11-27 12:33:01 +0900 +latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-taxonomy.ttl) +Rule for TTL (output/ttl/mgi_gene-ensembl_gene.ttl) ------------------------------ -Investigating output/ttl/ncbigene-taxonomy.ttl +Investigating output/ttl/mgi_gene-ensembl_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:47:44 +0900 +timestamp: 2023-12-02 04:07:37 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-taxonomy.tsv (2023-11-27 12:33:41 +0900) -latest-prerequisite time: 2023-11-27 12:33:41 +0900 +--output/tsv/mgi_gene-ensembl_gene.tsv (2023-12-02 02:07:46 +0900) +latest-prerequisite time: 2023-12-02 02:07:46 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-vgnc.ttl) +Rule for TTL (output/ttl/mgi_gene-hgnc.ttl) ------------------------------ -Investigating output/ttl/ncbigene-vgnc.ttl +Investigating output/ttl/mgi_gene-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:47:48 +0900 +timestamp: 2023-12-02 04:07:38 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-vgnc.tsv (2023-11-27 12:34:47 +0900) -latest-prerequisite time: 2023-11-27 12:34:47 +0900 +--output/tsv/mgi_gene-hgnc.tsv (2023-12-02 02:07:46 +0900) +latest-prerequisite time: 2023-12-02 02:07:46 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-wormbase_gene.ttl) +Rule for TTL (output/ttl/mgi_gene-mgi_allele.ttl) ------------------------------ -Investigating output/ttl/ncbigene-wormbase_gene.ttl +Investigating output/ttl/mgi_gene-mgi_allele.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:47:49 +0900 +timestamp: 2023-12-02 04:07:39 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-wormbase_gene.tsv (2023-11-27 12:35:51 +0900) -latest-prerequisite time: 2023-11-27 12:35:51 +0900 +--output/tsv/mgi_gene-mgi_allele.tsv (2023-12-02 02:07:48 +0900) +latest-prerequisite time: 2023-12-02 02:07:48 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-xenbase_gene.ttl) +Rule for TTL (output/ttl/mgi_gene-ncbigene.ttl) ------------------------------ -Investigating output/ttl/ncbigene-xenbase_gene.ttl +Investigating output/ttl/mgi_gene-ncbigene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:47:49 +0900 +timestamp: 2023-12-02 04:07:39 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-xenbase_gene.tsv (2023-11-27 12:36:56 +0900) -latest-prerequisite time: 2023-11-27 12:36:56 +0900 +--output/tsv/mgi_gene-ncbigene.tsv (2023-12-02 02:07:48 +0900) +latest-prerequisite time: 2023-12-02 02:07:48 +0900 ................................ -Rule for TTL (output/ttl/ncbigene-zfin_gene.ttl) +Rule for TTL (output/ttl/mgi_gene-uniprot.ttl) ------------------------------ -Investigating output/ttl/ncbigene-zfin_gene.ttl +Investigating output/ttl/mgi_gene-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 15:47:50 +0900 +timestamp: 2023-12-02 04:07:40 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/ncbigene-zfin_gene.tsv (2023-11-27 12:38:02 +0900) -latest-prerequisite time: 2023-11-27 12:38:02 +0900 +--output/tsv/mgi_gene-uniprot.tsv (2023-12-02 02:07:49 +0900) +latest-prerequisite time: 2023-12-02 02:07:49 +0900 ................................ -Rule for TTL (output/ttl/oma_protein-ensembl_gene.ttl) +Rule for TTL (output/ttl/mgi_genotype-doid.ttl) ------------------------------ -Investigating output/ttl/oma_protein-ensembl_gene.ttl +Investigating output/ttl/mgi_genotype-doid.ttl class: Rake::FileTask task needed: true -timestamp: 2023-10-13 23:39:31 +0900 +timestamp: 2023-12-02 04:07:40 +0900 pre-requisites: --output/ttl/ () ---output/tsv/oma_protein-ensembl_gene.tsv (2023-10-13 19:34:15 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/mgi_genotype-doid.tsv (2023-12-02 02:07:50 +0900) +latest-prerequisite time: 2023-12-02 02:07:50 +0900 ................................ -Rule for TTL (output/ttl/oma_protein-ensembl_transcript.ttl) +Rule for TTL (output/ttl/mgi_genotype-mgi_allele.ttl) ------------------------------ -Investigating output/ttl/oma_protein-ensembl_transcript.ttl +Investigating output/ttl/mgi_genotype-mgi_allele.ttl class: Rake::FileTask task needed: true -timestamp: 2023-10-13 23:39:55 +0900 +timestamp: 2023-12-02 04:07:42 +0900 pre-requisites: --output/ttl/ () ---output/tsv/oma_protein-ensembl_transcript.tsv (2023-10-13 19:43:07 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/mgi_genotype-mgi_allele.tsv (2023-12-02 02:07:52 +0900) +latest-prerequisite time: 2023-12-02 02:07:52 +0900 ................................ -Rule for TTL (output/ttl/oma_protein-ncbigene.ttl) +Rule for TTL (output/ttl/mgi_genotype-mp.ttl) ------------------------------ -Investigating output/ttl/oma_protein-ncbigene.ttl +Investigating output/ttl/mgi_genotype-mp.ttl class: Rake::FileTask task needed: true -timestamp: 2023-10-21 00:21:10 +0900 +timestamp: 2023-12-02 04:07:45 +0900 pre-requisites: --output/ttl/ () ---output/tsv/oma_protein-ncbigene.tsv (2023-10-20 20:12:58 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/mgi_genotype-mp.tsv (2023-12-02 02:07:54 +0900) +latest-prerequisite time: 2023-12-02 02:07:54 +0900 ................................ -Rule for TTL (output/ttl/oma_protein-uniprot.ttl) +Rule for TTL (output/ttl/ncbigene-ensembl_gene.ttl) ------------------------------ -Investigating output/ttl/oma_protein-uniprot.ttl +Investigating output/ttl/ncbigene-ensembl_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-10-13 23:43:15 +0900 +timestamp: 2023-12-02 04:09:12 +0900 pre-requisites: --output/ttl/ () ---output/tsv/oma_protein-uniprot.tsv (2023-10-13 19:43:31 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-ensembl_gene.tsv (2023-12-02 02:08:30 +0900) +latest-prerequisite time: 2023-12-02 02:08:30 +0900 ................................ -Rule for TTL (output/ttl/orphanet_gene-ensembl_gene.ttl) +Rule for TTL (output/ttl/ncbigene-ensembl_protein.ttl) ------------------------------ -Investigating output/ttl/orphanet_gene-ensembl_gene.ttl +Investigating output/ttl/ncbigene-ensembl_protein.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:08 +0900 +timestamp: 2023-12-02 04:10:40 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_gene-ensembl_gene.tsv (2023-11-18 02:00:38 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-ensembl_protein.tsv (2023-12-02 02:09:28 +0900) +latest-prerequisite time: 2023-12-02 02:09:28 +0900 ................................ -Rule for TTL (output/ttl/orphanet_gene-hgnc.ttl) +Rule for TTL (output/ttl/ncbigene-ensembl_transcript.ttl) ------------------------------ -Investigating output/ttl/orphanet_gene-hgnc.ttl +Investigating output/ttl/ncbigene-ensembl_transcript.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:08 +0900 +timestamp: 2023-12-02 04:12:23 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_gene-hgnc.tsv (2023-11-18 02:00:38 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-ensembl_transcript.tsv (2023-12-02 02:10:25 +0900) +latest-prerequisite time: 2023-12-02 02:10:25 +0900 ................................ -Rule for TTL (output/ttl/orphanet_gene-omim_gene.ttl) +Rule for TTL (output/ttl/ncbigene-flybase_gene.ttl) ------------------------------ -Investigating output/ttl/orphanet_gene-omim_gene.ttl +Investigating output/ttl/ncbigene-flybase_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:09 +0900 +timestamp: 2023-12-02 04:12:24 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_gene-omim_gene.tsv (2023-11-18 02:00:39 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-flybase_gene.tsv (2023-12-02 02:11:33 +0900) +latest-prerequisite time: 2023-12-02 02:11:33 +0900 ................................ -Rule for TTL (output/ttl/orphanet_gene-uniprot.ttl) +Rule for TTL (output/ttl/ncbigene-go.ttl) ------------------------------ -Investigating output/ttl/orphanet_gene-uniprot.ttl +Investigating output/ttl/ncbigene-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:09 +0900 +timestamp: 2023-12-02 04:20:30 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_gene-uniprot.tsv (2023-11-18 02:00:39 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-go.tsv (2023-12-02 02:13:54 +0900) +latest-prerequisite time: 2023-12-02 02:13:54 +0900 ................................ -Rule for TTL (output/ttl/orphanet_phenotype-meddra.ttl) +Rule for TTL (output/ttl/ncbigene-hgnc.ttl) ------------------------------ -Investigating output/ttl/orphanet_phenotype-meddra.ttl +Investigating output/ttl/ncbigene-hgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:09 +0900 +timestamp: 2023-12-02 04:20:32 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_phenotype-meddra.tsv (2023-11-18 02:00:40 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-hgnc.tsv (2023-12-02 02:13:55 +0900) +latest-prerequisite time: 2023-12-02 02:13:55 +0900 ................................ -Rule for TTL (output/ttl/orphanet_phenotype-mesh.ttl) +Rule for TTL (output/ttl/ncbigene-mgi_gene.ttl) ------------------------------ -Investigating output/ttl/orphanet_phenotype-mesh.ttl +Investigating output/ttl/ncbigene-mgi_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:09 +0900 +timestamp: 2023-12-02 04:20:33 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_phenotype-mesh.tsv (2023-11-18 02:00:40 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-mgi_gene.tsv (2023-12-02 02:14:52 +0900) +latest-prerequisite time: 2023-12-02 02:14:52 +0900 ................................ -Rule for TTL (output/ttl/orphanet_phenotype-omim_phenotype.ttl) +Rule for TTL (output/ttl/ncbigene-mirbase.ttl) ------------------------------ -Investigating output/ttl/orphanet_phenotype-omim_phenotype.ttl +Investigating output/ttl/ncbigene-mirbase.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:10 +0900 +timestamp: 2023-12-02 04:20:33 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_phenotype-omim_phenotype.tsv (2023-11-18 02:00:41 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-mirbase.tsv (2023-12-02 02:16:23 +0900) +latest-prerequisite time: 2023-12-02 02:16:23 +0900 ................................ -Rule for TTL (output/ttl/orphanet_phenotype-orphanet_gene.ttl) +Rule for TTL (output/ttl/ncbigene-omim_gene.ttl) ------------------------------ -Investigating output/ttl/orphanet_phenotype-orphanet_gene.ttl +Investigating output/ttl/ncbigene-omim_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:10 +0900 +timestamp: 2023-12-02 04:20:34 +0900 pre-requisites: --output/ttl/ () ---output/tsv/orphanet_phenotype-orphanet_gene.tsv (2023-11-18 02:00:41 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-omim_gene.tsv (2023-12-02 02:16:24 +0900) +latest-prerequisite time: 2023-12-02 02:16:24 +0900 ................................ -Rule for TTL (output/ttl/pdb-go.ttl) +Rule for TTL (output/ttl/ncbigene-refseq_genomic.ttl) ------------------------------ -Investigating output/ttl/pdb-go.ttl +Investigating output/ttl/ncbigene-refseq_genomic.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:23 +0900 +timestamp: 2023-12-02 04:20:36 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pdb-go.tsv (2023-11-18 02:00:46 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-refseq_genomic.tsv (2023-12-02 02:20:14 +0900) +latest-prerequisite time: 2023-12-02 02:20:14 +0900 ................................ -Rule for TTL (output/ttl/pdb-interpro.ttl) +Rule for TTL (output/ttl/ncbigene-refseq_protein.ttl) ------------------------------ -Investigating output/ttl/pdb-interpro.ttl +Investigating output/ttl/ncbigene-refseq_protein.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:30 +0900 +timestamp: 2023-12-02 04:32:00 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pdb-interpro.tsv (2023-11-18 02:00:48 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-refseq_protein.tsv (2023-12-02 02:25:08 +0900) +latest-prerequisite time: 2023-12-02 02:25:08 +0900 ................................ -Rule for TTL (output/ttl/pdb-pdb_ccd.ttl) +Rule for TTL (output/ttl/ncbigene-refseq_rna.ttl) ------------------------------ -Investigating output/ttl/pdb-pdb_ccd.ttl +Investigating output/ttl/ncbigene-refseq_rna.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:34 +0900 +timestamp: 2023-12-02 04:42:02 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pdb-pdb_ccd.tsv (2023-11-18 02:00:49 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-refseq_rna.tsv (2023-12-02 02:29:14 +0900) +latest-prerequisite time: 2023-12-02 02:29:14 +0900 ................................ -Rule for TTL (output/ttl/pdb-pfam.ttl) +Rule for TTL (output/ttl/ncbigene-rgd.ttl) ------------------------------ -Investigating output/ttl/pdb-pfam.ttl +Investigating output/ttl/ncbigene-rgd.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:37 +0900 +timestamp: 2023-12-02 04:42:05 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pdb-pfam.tsv (2023-11-18 02:00:50 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-rgd.tsv (2023-12-02 02:30:10 +0900) +latest-prerequisite time: 2023-12-02 02:30:10 +0900 ................................ -Rule for TTL (output/ttl/pdb-uniprot.ttl) +Rule for TTL (output/ttl/ncbigene-sgd.ttl) ------------------------------ -Investigating output/ttl/pdb-uniprot.ttl +Investigating output/ttl/ncbigene-sgd.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:40 +0900 +timestamp: 2023-12-02 04:42:05 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pdb-uniprot.tsv (2023-11-18 02:00:51 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-sgd.tsv (2023-12-02 02:31:15 +0900) +latest-prerequisite time: 2023-12-02 02:31:15 +0900 ................................ -Rule for TTL (output/ttl/prosite-prosite_prorule.ttl) +Rule for TTL (output/ttl/ncbigene-tair.ttl) ------------------------------ -Investigating output/ttl/prosite-prosite_prorule.ttl +Investigating output/ttl/ncbigene-tair.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:40 +0900 +timestamp: 2023-12-02 04:42:06 +0900 pre-requisites: --output/ttl/ () ---output/tsv/prosite-prosite_prorule.tsv (2023-11-18 02:00:53 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-tair.tsv (2023-12-02 02:32:20 +0900) +latest-prerequisite time: 2023-12-02 02:32:20 +0900 ................................ -Rule for TTL (output/ttl/pubchem_compound-atc.ttl) +Rule for TTL (output/ttl/ncbigene-taxonomy.ttl) ------------------------------ -Investigating output/ttl/pubchem_compound-atc.ttl +Investigating output/ttl/ncbigene-taxonomy.ttl class: Rake::FileTask task needed: true -timestamp: 2023-08-11 23:28:24 +0900 +timestamp: 2023-12-02 04:49:55 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_compound-atc.tsv (2023-08-11 19:32:51 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-taxonomy.tsv (2023-12-02 02:33:00 +0900) +latest-prerequisite time: 2023-12-02 02:33:00 +0900 ................................ -Rule for TTL (output/ttl/pubchem_compound-chebi.ttl) +Rule for TTL (output/ttl/ncbigene-vgnc.ttl) ------------------------------ -Investigating output/ttl/pubchem_compound-chebi.ttl +Investigating output/ttl/ncbigene-vgnc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:40:42 +0900 +timestamp: 2023-12-02 04:49:59 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_compound-chebi.tsv (2023-11-18 02:00:55 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-vgnc.tsv (2023-12-02 02:34:05 +0900) +latest-prerequisite time: 2023-12-02 02:34:05 +0900 ................................ -Rule for TTL (output/ttl/pubchem_compound-chembl_compound.ttl) +Rule for TTL (output/ttl/ncbigene-wormbase_gene.ttl) ------------------------------ -Investigating output/ttl/pubchem_compound-chembl_compound.ttl +Investigating output/ttl/ncbigene-wormbase_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:41:01 +0900 +timestamp: 2023-12-02 04:49:59 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_compound-chembl_compound.tsv (2023-11-18 02:01:01 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-wormbase_gene.tsv (2023-12-02 02:35:10 +0900) +latest-prerequisite time: 2023-12-02 02:35:10 +0900 ................................ -Rule for TTL (output/ttl/pubchem_compound-drugbank.ttl) +Rule for TTL (output/ttl/ncbigene-xenbase_gene.ttl) ------------------------------ -Investigating output/ttl/pubchem_compound-drugbank.ttl +Investigating output/ttl/ncbigene-xenbase_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:41:02 +0900 +timestamp: 2023-12-02 04:50:00 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_compound-drugbank.tsv (2023-11-18 02:01:01 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-xenbase_gene.tsv (2023-12-02 02:36:14 +0900) +latest-prerequisite time: 2023-12-02 02:36:14 +0900 ................................ -Rule for TTL (output/ttl/pubchem_compound-glytoucan.ttl) +Rule for TTL (output/ttl/ncbigene-zfin_gene.ttl) ------------------------------ -Investigating output/ttl/pubchem_compound-glytoucan.ttl +Investigating output/ttl/ncbigene-zfin_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 06:41:02 +0900 +timestamp: 2023-12-02 04:50:00 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_compound-glytoucan.tsv (2023-11-18 02:01:02 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/ncbigene-zfin_gene.tsv (2023-12-02 02:37:19 +0900) +latest-prerequisite time: 2023-12-02 02:37:19 +0900 ................................ -Rule for TTL (output/ttl/pubchem_pathway-ncbigene.ttl) +Rule for TTL (output/ttl/oma_protein-ensembl_gene.ttl) ------------------------------ -Investigating output/ttl/pubchem_pathway-ncbigene.ttl +Investigating output/ttl/oma_protein-ensembl_gene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:22:36 +0900 +timestamp: 2023-10-13 23:39:31 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_pathway-ncbigene.tsv (2023-11-18 02:08:37 +0900) +--output/tsv/oma_protein-ensembl_gene.tsv (2023-10-13 19:34:15 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/pubchem_pathway-pathbank.ttl) +Rule for TTL (output/ttl/oma_protein-ensembl_transcript.ttl) ------------------------------ -Investigating output/ttl/pubchem_pathway-pathbank.ttl +Investigating output/ttl/oma_protein-ensembl_transcript.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:22:37 +0900 +timestamp: 2023-10-13 23:39:55 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_pathway-pathbank.tsv (2023-11-18 02:08:38 +0900) +--output/tsv/oma_protein-ensembl_transcript.tsv (2023-10-13 19:43:07 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/pubchem_pathway-pubchem_compound.ttl) +Rule for TTL (output/ttl/oma_protein-ncbigene.ttl) ------------------------------ -Investigating output/ttl/pubchem_pathway-pubchem_compound.ttl +Investigating output/ttl/oma_protein-ncbigene.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:22:47 +0900 +timestamp: 2023-10-21 00:21:10 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_pathway-pubchem_compound.tsv (2023-11-18 02:08:40 +0900) +--output/tsv/oma_protein-ncbigene.tsv (2023-10-20 20:12:58 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/pubchem_pathway-reactome_pathway.ttl) +Rule for TTL (output/ttl/oma_protein-uniprot.ttl) ------------------------------ -Investigating output/ttl/pubchem_pathway-reactome_pathway.ttl +Investigating output/ttl/oma_protein-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:22:47 +0900 +timestamp: 2023-10-13 23:43:15 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_pathway-reactome_pathway.tsv (2023-11-18 02:08:41 +0900) +--output/tsv/oma_protein-uniprot.tsv (2023-10-13 19:43:31 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/pubchem_pathway-uniprot.ttl) +Rule for TTL (output/ttl/prosite-prosite_prorule.ttl) ------------------------------ -Investigating output/ttl/pubchem_pathway-uniprot.ttl +Investigating output/ttl/prosite-prosite_prorule.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:22:52 +0900 +timestamp: 2023-11-18 06:40:40 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_pathway-uniprot.tsv (2023-11-18 02:08:42 +0900) +--output/tsv/prosite-prosite_prorule.tsv (2023-11-18 02:00:53 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -Rule for TTL (output/ttl/pubchem_pathway-wikipathways.ttl) +Rule for TTL (output/ttl/pubchem_compound-atc.ttl) ------------------------------ -Investigating output/ttl/pubchem_pathway-wikipathways.ttl +Investigating output/ttl/pubchem_compound-atc.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:22:52 +0900 +timestamp: 2023-08-11 23:28:24 +0900 pre-requisites: --output/ttl/ () ---output/tsv/pubchem_pathway-wikipathways.tsv (2023-11-18 02:08:43 +0900) +--output/tsv/pubchem_compound-atc.tsv (2023-08-11 19:32:51 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ @@ -8530,12 +5820,12 @@ Rule for TTL (output/ttl/reactome_pathway-go.ttl) Investigating output/ttl/reactome_pathway-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:22:55 +0900 +timestamp: 2023-12-02 04:51:12 +0900 pre-requisites: --output/ttl/ () ---output/tsv/reactome_pathway-go.tsv (2023-11-18 02:08:44 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/reactome_pathway-go.tsv (2023-12-02 02:46:41 +0900) +latest-prerequisite time: 2023-12-02 02:46:41 +0900 ................................ Rule for TTL (output/ttl/reactome_pathway-iuphar_ligand.ttl) @@ -8569,12 +5859,12 @@ Rule for TTL (output/ttl/reactome_pathway-reactome_reaction.ttl) Investigating output/ttl/reactome_pathway-reactome_reaction.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:23:00 +0900 +timestamp: 2023-12-02 04:51:16 +0900 pre-requisites: --output/ttl/ () ---output/tsv/reactome_pathway-reactome_reaction.tsv (2023-11-18 02:08:46 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/reactome_pathway-reactome_reaction.tsv (2023-12-02 02:46:46 +0900) +latest-prerequisite time: 2023-12-02 02:46:46 +0900 ................................ Rule for TTL (output/ttl/reactome_pathway-uniprot.ttl) @@ -8608,12 +5898,12 @@ Rule for TTL (output/ttl/reactome_reaction-go.ttl) Investigating output/ttl/reactome_reaction-go.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-18 07:23:10 +0900 +timestamp: 2023-12-02 04:51:17 +0900 pre-requisites: --output/ttl/ () ---output/tsv/reactome_reaction-go.tsv (2023-11-18 02:08:49 +0900) --config/dataset.yaml (2023-11-24 17:00:14 +0900) -latest-prerequisite time: 2023-11-24 17:00:14 +0900 +--output/tsv/reactome_reaction-go.tsv (2023-12-02 02:46:47 +0900) +latest-prerequisite time: 2023-12-02 02:46:47 +0900 ................................ Rule for TTL (output/ttl/reactome_reaction-iuphar_ligand.ttl) @@ -8660,12 +5950,12 @@ Rule for TTL (output/ttl/refseq_protein-uniprot.ttl) Investigating output/ttl/refseq_protein-uniprot.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 17:33:10 +0900 +timestamp: 2023-12-02 05:53:56 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/refseq_protein-uniprot.tsv (2023-11-27 12:53:34 +0900) -latest-prerequisite time: 2023-11-27 12:53:34 +0900 +--output/tsv/refseq_protein-uniprot.tsv (2023-12-02 02:53:15 +0900) +latest-prerequisite time: 2023-12-02 02:53:15 +0900 ................................ Rule for TTL (output/ttl/refseq_rna-dbsnp.ttl) @@ -9076,12 +6366,12 @@ Rule for TTL (output/ttl/swisslipids-chebi.ttl) Investigating output/ttl/swisslipids-chebi.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 18:36:34 +0900 +timestamp: 2023-12-02 05:54:02 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/swisslipids-chebi.tsv (2023-11-27 13:53:41 +0900) -latest-prerequisite time: 2023-11-27 13:53:41 +0900 +--output/tsv/swisslipids-chebi.tsv (2023-12-02 02:53:29 +0900) +latest-prerequisite time: 2023-12-02 02:53:29 +0900 ................................ Rule for TTL (output/ttl/swisslipids-hmdb.ttl) @@ -9089,12 +6379,12 @@ Rule for TTL (output/ttl/swisslipids-hmdb.ttl) Investigating output/ttl/swisslipids-hmdb.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 18:36:35 +0900 +timestamp: 2023-12-02 05:54:02 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/swisslipids-hmdb.tsv (2023-11-27 13:53:55 +0900) -latest-prerequisite time: 2023-11-27 13:53:55 +0900 +--output/tsv/swisslipids-hmdb.tsv (2023-12-02 02:53:43 +0900) +latest-prerequisite time: 2023-12-02 02:53:43 +0900 ................................ Rule for TTL (output/ttl/swisslipids-inchi_key.ttl) @@ -9102,12 +6392,12 @@ Rule for TTL (output/ttl/swisslipids-inchi_key.ttl) Investigating output/ttl/swisslipids-inchi_key.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 18:36:43 +0900 +timestamp: 2023-12-02 05:54:08 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/swisslipids-inchi_key.tsv (2023-11-27 13:54:07 +0900) -latest-prerequisite time: 2023-11-27 13:54:07 +0900 +--output/tsv/swisslipids-inchi_key.tsv (2023-12-02 02:53:55 +0900) +latest-prerequisite time: 2023-12-02 02:53:55 +0900 ................................ Rule for TTL (output/ttl/taxonomy-pubmed.ttl) @@ -9115,12 +6405,12 @@ Rule for TTL (output/ttl/taxonomy-pubmed.ttl) Investigating output/ttl/taxonomy-pubmed.ttl class: Rake::FileTask task needed: true -timestamp: 2023-11-27 18:36:44 +0900 +timestamp: 2023-12-02 05:54:08 +0900 pre-requisites: --output/ttl/ () --config/dataset.yaml (2023-11-24 17:00:14 +0900) ---output/tsv/taxonomy-pubmed.tsv (2023-11-27 13:54:08 +0900) -latest-prerequisite time: 2023-11-27 13:54:08 +0900 +--output/tsv/taxonomy-pubmed.tsv (2023-12-02 02:53:56 +0900) +latest-prerequisite time: 2023-12-02 02:53:56 +0900 ................................ Rule for TTL (output/ttl/togovar-clinvar.ttl) @@ -9422,36 +6712,27 @@ pre-requisites: latest-prerequisite time: 2023-11-27 14:01:31 +0900 ................................ -### Update ID and Label TTL for atc if check_id_label_filesize false or check_id_label_timestamp true +### Update ID and Label TTL for atc if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/atc.ttl has no timestamp file -# File output/id-label/atc.ttl is created 14.021748732560612 days ago (will be updated when >5 days) -## Update output/id-label/atc.ttl -< 2023-11-27T22:57:34 atc -togoid-rdfize-id-label atc -> 2023-11-27T22:57:37 atc +# File output/id-label/atc.ttl is created 4.2892602504063895 days ago (will be updated when >5 days) +# => Preserving output/ttl/atc.ttl ### Update ID and Label TTL for bioproject if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/bioproject.ttl is older than input/bioproject/download.lock ## Update output/id-label/bioproject.ttl -< 2023-11-27T22:57:37 bioproject +< 2023-12-02T05:54:09 bioproject togoid-rdfize-id-label bioproject -> 2023-11-27T23:00:12 bioproject +> 2023-12-02T05:54:15 bioproject ### Update ID and Label TTL for cellosaurus if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/cellosaurus.ttl is newer than input/cellosaurus/download.lock # => Preserving output/ttl/cellosaurus.ttl -### Update ID and Label TTL for ec if check_id_label_filesize false or check_id_label_timestamp true +### Update ID and Label TTL for ec if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/ec.ttl has no timestamp file -# File output/id-label/ec.ttl is created 14.023515942150418 days ago (will be updated when >5 days) -## Update output/id-label/ec.ttl -< 2023-11-27T23:00:12 ec -togoid-rdfize-id-label ec -> 2023-11-27T23:00:14 ec -### Update ID and Label TTL for flybase_gene if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/ec.ttl is created 4.28750974703566 days ago (will be updated when >5 days) +# => Preserving output/ttl/ec.ttl +### Update ID and Label TTL for flybase_gene if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/flybase_gene.ttl has no timestamp file -# File output/id-label/flybase_gene.ttl is created 14.02276450513978 days ago (will be updated when >5 days) -## Update output/id-label/flybase_gene.ttl -< 2023-11-27T23:00:15 flybase_gene -togoid-rdfize-id-label flybase_gene -> 2023-11-27T23:02:28 flybase_gene +# File output/id-label/flybase_gene.ttl is created 4.2859583965824655 days ago (will be updated when >5 days) +# => Preserving output/ttl/flybase_gene.ttl ### Update ID and Label TTL for hmdb if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/hmdb.ttl is newer than input/hmdb/download.lock # => Preserving output/ttl/hmdb.ttl @@ -9461,118 +6742,79 @@ togoid-rdfize-id-label flybase_gene ### Update ID and Label TTL for interpro if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/interpro.ttl is newer than input/interpro/download.lock # => Preserving output/ttl/interpro.ttl -### Update ID and Label TTL for mgi_allele if check_id_label_filesize false or check_id_label_timestamp true +### Update ID and Label TTL for mgi_allele if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/mgi_allele.ttl has no timestamp file -# File output/id-label/mgi_allele.ttl is created 14.024264072580094 days ago (will be updated when >5 days) -## Update output/id-label/mgi_allele.ttl -< 2023-11-27T23:02:28 mgi_allele -togoid-rdfize-id-label mgi_allele -> 2023-11-27T23:02:29 mgi_allele +# File output/id-label/mgi_allele.ttl is created 4.285946417877454 days ago (will be updated when >5 days) +# => Preserving output/ttl/mgi_allele.ttl ### Update ID and Label TTL for mgi_gene if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/mgi_gene.ttl is older than input/mgi_gene/download.lock ## Update output/id-label/mgi_gene.ttl -< 2023-11-27T23:02:29 mgi_gene +< 2023-12-02T05:54:15 mgi_gene togoid-rdfize-id-label mgi_gene -> 2023-11-27T23:02:33 mgi_gene +> 2023-12-02T05:54:18 mgi_gene ### Update ID and Label TTL for mgi_genotype if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/mgi_genotype.ttl is older than input/mgi_genotype/download.lock ## Update output/id-label/mgi_genotype.ttl -< 2023-11-27T23:02:33 mgi_genotype +< 2023-12-02T05:54:18 mgi_genotype togoid-rdfize-id-label mgi_genotype -> 2023-11-27T23:02:34 mgi_genotype -### Update ID and Label TTL for mirbase if check_id_label_filesize false or check_id_label_timestamp true +> 2023-12-02T05:54:19 mgi_genotype +### Update ID and Label TTL for mirbase if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/mirbase.ttl has no timestamp file -# File output/id-label/mirbase.ttl is created 14.023199804554178 days ago (will be updated when >5 days) -## Update output/id-label/mirbase.ttl -< 2023-11-27T23:02:34 mirbase -togoid-rdfize-id-label mirbase -> 2023-11-27T23:04:06 mirbase -### Update ID and Label TTL for pathbank if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/mirbase.ttl is created 4.284877994791979 days ago (will be updated when >5 days) +# => Preserving output/ttl/mirbase.ttl +### Update ID and Label TTL for pathbank if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/pathbank.ttl has no timestamp file -# File output/id-label/pathbank.ttl is created 14.024247378649711 days ago (will be updated when >5 days) -## Update output/id-label/pathbank.ttl -< 2023-11-27T23:04:06 pathbank -togoid-rdfize-id-label pathbank -> 2023-11-27T23:04:09 pathbank -### Update ID and Label TTL for pfam if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/pathbank.ttl is created 4.2848462961768865 days ago (will be updated when >5 days) +# => Preserving output/ttl/pathbank.ttl +### Update ID and Label TTL for pfam if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/pfam.ttl has no timestamp file -# File output/id-label/pfam.ttl is created 14.024240326257674 days ago (will be updated when >5 days) -## Update output/id-label/pfam.ttl -< 2023-11-27T23:04:09 pfam -togoid-rdfize-id-label pfam -> 2023-11-27T23:04:12 pfam -### Update ID and Label TTL for pubchem_pathway if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/pfam.ttl is created 4.284806506897986 days ago (will be updated when >5 days) +# => Preserving output/ttl/pfam.ttl +### Update ID and Label TTL for pubchem_pathway if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/pubchem_pathway.ttl has no timestamp file -# File output/id-label/pubchem_pathway.ttl is created 14.024267186337545 days ago (will be updated when >5 days) -## Update output/id-label/pubchem_pathway.ttl -< 2023-11-27T23:04:12 pubchem_pathway -togoid-rdfize-id-label pubchem_pathway -> 2023-11-27T23:04:14 pubchem_pathway +# File output/id-label/pubchem_pathway.ttl is created 4.28478657900735 days ago (will be updated when >5 days) +# => Preserving output/ttl/pubchem_pathway.ttl ### Update ID and Label TTL for refseq_rna if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/refseq_rna.ttl is newer than input/refseq_rna/download.lock # => Preserving output/ttl/refseq_rna.ttl -### Update ID and Label TTL for rgd if check_id_label_filesize false or check_id_label_timestamp true +### Update ID and Label TTL for rgd if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/rgd.ttl has no timestamp file -# File output/id-label/rgd.ttl is created 14.023637984418796 days ago (will be updated when >5 days) -## Update output/id-label/rgd.ttl -< 2023-11-27T23:04:14 rgd -togoid-rdfize-id-label rgd -> 2023-11-27T23:05:09 rgd -### Update ID and Label TTL for sgd if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/rgd.ttl is created 4.284149909238958 days ago (will be updated when >5 days) +# => Preserving output/ttl/rgd.ttl +### Update ID and Label TTL for sgd if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/sgd.ttl has no timestamp file -# File output/id-label/sgd.ttl is created 14.023513092454698 days ago (will be updated when >5 days) -## Update output/id-label/sgd.ttl -< 2023-11-27T23:05:09 sgd -togoid-rdfize-id-label sgd -> 2023-11-27T23:06:14 sgd +# File output/id-label/sgd.ttl is created 4.28339773036 days ago (will be updated when >5 days) +# => Preserving output/ttl/sgd.ttl ### Update ID and Label TTL for swisslipids if check_id_label_filesize false or check_id_label_timestamp true # File output/id-label/swisslipids.ttl is older than input/swisslipids/download.lock ## Update output/id-label/swisslipids.ttl -< 2023-11-27T23:06:14 swisslipids +< 2023-12-02T05:54:19 swisslipids togoid-rdfize-id-label swisslipids -> 2023-11-27T23:06:20 swisslipids -### Update ID and Label TTL for tair if check_id_label_filesize false or check_id_label_timestamp true +> 2023-12-02T05:54:26 swisslipids +### Update ID and Label TTL for tair if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/tair.ttl has no timestamp file -# File output/id-label/tair.ttl is created 14.023491883147848 days ago (will be updated when >5 days) -## Update output/id-label/tair.ttl -< 2023-11-27T23:06:20 tair -togoid-rdfize-id-label tair -> 2023-11-27T23:07:24 tair -### Update ID and Label TTL for uniprot_reference_proteome if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/tair.ttl is created 4.282655628872523 days ago (will be updated when >5 days) +# => Preserving output/ttl/tair.ttl +### Update ID and Label TTL for uniprot_reference_proteome if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/uniprot_reference_proteome.ttl has no timestamp file -# File output/id-label/uniprot_reference_proteome.ttl is created 13.519026203460648 days ago (will be updated when >5 days) -## Update output/id-label/uniprot_reference_proteome.ttl -< 2023-11-27T23:07:24 uniprot_reference_proteome -togoid-rdfize-id-label uniprot_reference_proteome -> 2023-11-27T23:07:27 uniprot_reference_proteome -### Update ID and Label TTL for vgnc if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/uniprot_reference_proteome.ttl is created 4.282621765952292 days ago (will be updated when >5 days) +# => Preserving output/ttl/uniprot_reference_proteome.ttl +### Update ID and Label TTL for vgnc if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/vgnc.ttl has no timestamp file -# File output/id-label/vgnc.ttl is created 9.293094530576978 days ago (will be updated when >5 days) -## Update output/id-label/vgnc.ttl -< 2023-11-27T23:07:27 vgnc -togoid-rdfize-id-label vgnc -> 2023-11-27T23:08:31 vgnc -### Update ID and Label TTL for wormbase_gene if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/vgnc.ttl is created 4.2818773190767825 days ago (will be updated when >5 days) +# => Preserving output/ttl/vgnc.ttl +### Update ID and Label TTL for wormbase_gene if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/wormbase_gene.ttl has no timestamp file -# File output/id-label/wormbase_gene.ttl is created 9.292995659588172 days ago (will be updated when >5 days) -## Update output/id-label/wormbase_gene.ttl -< 2023-11-27T23:08:31 wormbase_gene -togoid-rdfize-id-label wormbase_gene -> 2023-11-27T23:09:36 wormbase_gene -### Update ID and Label TTL for xenbase_gene if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/wormbase_gene.ttl is created 4.281132363083287 days ago (will be updated when >5 days) +# => Preserving output/ttl/wormbase_gene.ttl +### Update ID and Label TTL for xenbase_gene if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/xenbase_gene.ttl has no timestamp file -# File output/id-label/xenbase_gene.ttl is created 9.292967879519109 days ago (will be updated when >5 days) -## Update output/id-label/xenbase_gene.ttl -< 2023-11-27T23:09:36 xenbase_gene -togoid-rdfize-id-label xenbase_gene -> 2023-11-27T23:10:40 xenbase_gene -### Update ID and Label TTL for zfin_gene if check_id_label_filesize false or check_id_label_timestamp true +# File output/id-label/xenbase_gene.ttl is created 4.280390068906285 days ago (will be updated when >5 days) +# => Preserving output/ttl/xenbase_gene.ttl +### Update ID and Label TTL for zfin_gene if check_id_label_filesize false or check_id_label_timestamp false # File output/id-label/zfin_gene.ttl has no timestamp file -# File output/id-label/zfin_gene.ttl is created 9.292936468073588 days ago (will be updated when >5 days) -## Update output/id-label/zfin_gene.ttl -< 2023-11-27T23:10:40 zfin_gene -togoid-rdfize-id-label zfin_gene -> 2023-11-27T23:11:44 zfin_gene +# File output/id-label/zfin_gene.ttl is created 4.2796433070579045 days ago (will be updated when >5 days) +# => Preserving output/ttl/zfin_gene.ttl Rule for ID and Label TTL (output/id-label/cellosaurus.ttl) ------------------------------ Investigating output/id-label/cellosaurus.ttl @@ -9634,4 +6876,4 @@ latest-prerequisite time: 2023-11-24 17:00:14 +0900 ................................ -*** Finished: 2023-11-27T23:11:44 *** +*** Finished: 2023-12-02T05:54:26 *** diff --git a/ontology/dataset.tsv b/ontology/dataset.tsv index df6d9961..c49d9e22 100644 --- a/ontology/dataset.tsv +++ b/ontology/dataset.tsv @@ -53,7 +53,7 @@ mondo MONDO Phenotype mp Mammalian Phenotype Ontology Phenotype nando NANDO Phenotype nbdc_human_db NBDC Human Database Project -ncbigene NCBI gene Gene +ncbigene NCBI Gene Gene ncit_disease NCIt disease Phenotype ncit_tissue NCIt tissue Anatomy oma_group OMA group Ortholog diff --git a/ontology/togoid-ontology.html b/ontology/togoid-ontology.html index c622c641..068d3d20 100644 --- a/ontology/togoid-ontology.html +++ b/ontology/togoid-ontology.html @@ -3057,7 +3057,7 @@

rdfs:label -NCBI gene +NCBI Gene diff --git a/ontology/togoid-ontology.nt b/ontology/togoid-ontology.nt index 6dea932a..efe452ea 100644 --- a/ontology/togoid-ontology.nt +++ b/ontology/togoid-ontology.nt @@ -397,7 +397,7 @@ . . "ncbigene" . - "NCBI gene" . + "NCBI Gene" . . . . diff --git a/ontology/togoid-ontology.rdf b/ontology/togoid-ontology.rdf index 8e418ff2..db881d08 100644 --- a/ontology/togoid-ontology.rdf +++ b/ontology/togoid-ontology.rdf @@ -421,7 +421,7 @@ ncbigene - NCBI gene + NCBI Gene diff --git a/ontology/togoid-ontology.ttl b/ontology/togoid-ontology.ttl index 5b62dd63..34dbe76e 100644 --- a/ontology/togoid-ontology.ttl +++ b/ontology/togoid-ontology.ttl @@ -530,7 +530,7 @@ :Ncbigene a owl:Class ; dcterms:identifier "ncbigene" ; - rdfs:label "NCBI gene" ; + rdfs:label "NCBI Gene" ; rdfs:subClassOf :Gene, :Dataset . :NcitDisease