diff --git a/Rakefile b/Rakefile
index bce3e62f..177e8061 100644
--- a/Rakefile
+++ b/Rakefile
@@ -334,6 +334,8 @@ module TogoID
         return "prepare:ncbigene"
       when /#{OUTPUT_TSV_DIR}oma_protein/
         return "prepare:oma_protein"
+      when /#{OUTPUT_TSV_DIR}prosite/
+        return "prepare:prosite"
       when /#{OUTPUT_TSV_DIR}reactome/
         return "prepare:reactome"
       when /#{OUTPUT_TSV_DIR}refseq_protein/
@@ -473,7 +475,7 @@ end
 
 namespace :prepare do
   desc "Prepare all"
-  task :all => [ :bioproject, :cellosaurus, :ensembl, :hmdb, :homologene, :hp_phenotype, :cog, :interpro, :ncbigene, :oma_protein, :reactome, :refseq_protein, :refseq_rna, :rhea, :sra, :swisslipids, :uniprot, :taxonomy ]
+  task :all => [ :bioproject, :cellosaurus, :ensembl, :hmdb, :homologene, :hp_phenotype, :cog, :interpro, :ncbigene, :oma_protein, :prosite, :reactome, :refseq_protein, :refseq_rna, :rhea, :sra, :swisslipids, :uniprot, :taxonomy ]
 
   directory INPUT_DRUGBANK_DIR    = "input/drugbank"
   directory INPUT_BIOPROJECT_DIR  = "input/bioproject"
@@ -486,6 +488,7 @@ namespace :prepare do
   directory INPUT_INTERPRO_DIR    = "input/interpro"
   directory INPUT_NCBIGENE_DIR    = "input/ncbigene"
   directory INPUT_OMA_PROTEIN_DIR = "input/oma_protein"
+  directory INPUT_PROSITE_DIR     = "input/prosite"
   directory INPUT_REACTOME_DIR    = "input/reactome"
   directory INPUT_REFSEQ_PROTEIN_DIR  = "input/refseq_protein"
   directory INPUT_REFSEQ_RNA_DIR  = "input/refseq_rna"
@@ -724,6 +727,21 @@ namespace :prepare do
     end
   end
 
+  desc "Prepare required files for PROSITE"
+  task :prosite => INPUT_PROSITE_DIR do
+    $stderr.puts "## Prepare input files for PROSITE"
+    download_lock(INPUT_PROSITE_DIR) do
+      updated = false
+      input_file = "#{INPUT_PROSITE_DIR}/prosite.dat"
+      input_url  = "https://ftp.expasy.org/databases/prosite/prosite.dat"
+      if update_input_file?(input_file, input_url)
+        download_file(INPUT_PROSITE_DIR, input_url)
+        updated = true
+      end
+      updated
+    end
+  end
+  
   desc "Prepare required files for Reactome"
   task :reactome => INPUT_REACTOME_DIR do
     $stderr.puts "## Prepare input files for Reactome"
diff --git a/bin/prosite_prorule.awk b/bin/prosite_prorule.awk
new file mode 100644
index 00000000..1612c5e0
--- /dev/null
+++ b/bin/prosite_prorule.awk
@@ -0,0 +1,28 @@
+BEGIN { 
+    RS="//\n"; 
+    FS="\n"; 
+    ac = ""; 
+    pr = ""; 
+    OFS="\t"; 
+}
+
+{
+    for (i=1; i<=NF; i++) {
+        if ($i ~ /^AC/) {
+            split($i, ac_arr, "   ");
+            ac = ac_arr[2];
+            gsub(/;$/, "", ac);  # 行末のセミコロンを削除
+        }
+        if ($i ~ /^PR/) {
+            split($i, pr_arr, "   ");
+            split(pr_arr[2], pr_ids, ";");  # セミコロンで複数のIDを区切る
+            for (j=1; j<=length(pr_ids); j++) {
+                gsub(/^ +| +$/, "", pr_ids[j]);  # 余分な空白を削除
+                if (ac && pr_ids[j]) {
+                    print ac, pr_ids[j];
+                }
+            }
+            ac = ""; 
+        }
+    }
+}
diff --git a/config/dataset.yaml b/config/dataset.yaml
index d2368e64..9c5a82ba 100644
--- a/config/dataset.yaml
+++ b/config/dataset.yaml
@@ -652,6 +652,22 @@ pfam:
   examples:
     - ["PF03719","PF03726","PF02809","PF00105","PF00250","PF00412","PF01412","PF00459","PF02532","PF01226"]
   method: awk -F "\t" 'FNR==NR&&$2=="name"{a[$1]=$3}FNR!=NR&&$2=="PFAM"{print $3 "\t" a[$1]}' $TOGOID_ROOT/input/interpro/interpro.tsv $TOGOID_ROOT/input/interpro/interpro.tsv
+prosite:
+  label: PROSITE
+  catalog: nbdc00241
+  category: Domain
+  regex: '^(?<id>PS\d{5})$'
+  prefix: 'http://identifiers.org/prosite/'
+  examples:
+    - ["PS01177","PS00516","PS01065","PS00418","PS01085","PS01086","PS01293","PS00355","PS01253","PS00992"]
+prosite_prorule:
+  label: PROSITE ProRule
+  catalog: nbdc00241
+  category: AnnotationRule
+  regex: '^(?<id>PRU\d{5})$'
+  prefix: 'https://prosite.expasy.org/rule/'
+  examples:
+    - ["PRU00498","PRU00672","PRU00673","PRU00293","PRU00499","PRU10142","PRU10001","PRU10002","PRU10004","PRU10005"]
 pubchem_compound:
   label: PubChem compound
   catalog: nbdc00641
@@ -768,6 +784,14 @@ sgd:
   prefix: 'http://identifiers.org/sgd/'
   examples:
     - ["S000003096","S000003789","S000005770","S000028467","S000006377","S000001180","S000003769","S000001459","S000004428","S000006021"]
+smart:
+  label: SMART
+  catalog: nbdc00682
+  category: Domain
+  regex: '^(?<id>SM\d{5})$'
+  prefix: 'http://identifiers.org/smart/'
+  examples:
+    - ["SM00130","SM00239","SM00043","SM00091","SM00104","SM01001","SM00135","SM00281","SM00996","SM00015"]
 sra_accession:
   label: SRA accession
   catalog: nbdc00687
diff --git a/config/interpro-prosite/config.yaml b/config/interpro-prosite/config.yaml
new file mode 100644
index 00000000..fe1d6f13
--- /dev/null
+++ b/config/interpro-prosite/config.yaml
@@ -0,0 +1,7 @@
+link:
+  forward: TIO_000001
+  reverse: TIO_000001
+  file: sample.tsv
+update:
+  frequency: Bimonthly
+  method: awk -F '\t' -v db=PROSITE '$2 == db {print $1 "\t" $3}' $TOGOID_ROOT/input/interpro/interpro.tsv
diff --git a/config/interpro-prosite/sample.tsv b/config/interpro-prosite/sample.tsv
new file mode 100644
index 00000000..71e03bd0
--- /dev/null
+++ b/config/interpro-prosite/sample.tsv
@@ -0,0 +1,10 @@
+IPR000020	PS01177
+IPR000035	PS00516
+IPR000049	PS01065
+IPR000052	PS00418
+IPR000056	PS01085
+IPR000056	PS01086
+IPR000059	PS01293
+IPR000079	PS00355
+IPR000083	PS01253
+IPR000096	PS00992
diff --git a/config/interpro-smart/config.yaml b/config/interpro-smart/config.yaml
new file mode 100644
index 00000000..2a59c72d
--- /dev/null
+++ b/config/interpro-smart/config.yaml
@@ -0,0 +1,7 @@
+link:
+  forward: TIO_000001
+  reverse: TIO_000001
+  file: sample.tsv
+update:
+  frequency: Bimonthly
+  method: awk -F '\t' -v db=SMART '$2 == db {print $1 "\t" $3}' $TOGOID_ROOT/input/interpro/interpro.tsv
diff --git a/config/interpro-smart/sample.tsv b/config/interpro-smart/sample.tsv
new file mode 100644
index 00000000..422886d4
--- /dev/null
+++ b/config/interpro-smart/sample.tsv
@@ -0,0 +1,10 @@
+IPR000001	SM00130
+IPR000008	SM00239
+IPR000010	SM00043
+IPR000014	SM00091
+IPR000020	SM00104
+IPR000031	SM01001
+IPR000033	SM00135
+IPR000034	SM00281
+IPR000043	SM00996
+IPR000048	SM00015
diff --git a/config/prosite-prosite_prorule/config.yaml b/config/prosite-prosite_prorule/config.yaml
new file mode 100644
index 00000000..8e5935a0
--- /dev/null
+++ b/config/prosite-prosite_prorule/config.yaml
@@ -0,0 +1,7 @@
+link:
+  forward: TIO_000114
+  reverse: TIO_000115
+  file: sample.tsv
+update:
+  frequency: Bimonthly
+  method: awk -f $TOGOID_ROOT/bin/prosite_prorule.awk $TOGOID_ROOT/input/prosite/prosite.dat
diff --git a/config/prosite-prosite_prorule/sample.tsv b/config/prosite-prosite_prorule/sample.tsv
new file mode 100644
index 00000000..4e5da572
--- /dev/null
+++ b/config/prosite-prosite_prorule/sample.tsv
@@ -0,0 +1,10 @@
+PS00001 PRU00498
+PS00005 PRU00672
+PS00006 PRU00673
+PS00016 PRU00293
+PS00017 PRU00499
+PS00018 PRU10142
+PS00061 PRU10001
+PS00064 PRU10002
+PS00068 PRU10004
+PS00069 PRU10005
diff --git a/docs/help.md b/docs/help.md
index 342023c6..09dde536 100644
--- a/docs/help.md
+++ b/docs/help.md
@@ -1,5 +1,5 @@
 # TogoID ver. 1.1
-Datasets last updated: 2023/10/10
+Datasets last updated: 2023/10/16
 
 ## About
 - [TogoID](https://togoid.dbcls.jp/) is an ID conversion service implementing unique features with an intuitive web interface and an API for programmatic access. TogoID currently supports 89 datasets covering various biological categories. TogoID users can perform exploratory multistep conversions to find a path among IDs. To guide the interpretation of biological meanings in the conversions, we crafted an [ontology](https://togoid.dbcls.jp/ontology) that defines the semantics of the dataset relations.
@@ -22,9 +22,9 @@ Shuya Ikeda, Hiromasa Ono, Tazro Ohta, Hirokazu Chiba, Yuki Naito, Yuki Moriya,
 
 - [API Documentation (Swagger)](https://togoid.dbcls.jp/apidoc/)
 
-## Statistics (as of 2023/10/10)
+## Statistics (as of 2023/10/16)
 - Number of target datasets 
-    - 96 (from 69 databases)
+    - 99 (from 71 databases)
 - For details on the target DBs and ID examples, please refer to the "DATASETS" tab. 
 
 ## Web user interface
diff --git a/docs/help_ja.md b/docs/help_ja.md
index 322e1005..2f8e6446 100644
--- a/docs/help_ja.md
+++ b/docs/help_ja.md
@@ -1,5 +1,5 @@
 # TogoID ver. 1.1
-Datasets last updated: 2023/10/10
+Datasets last updated: 2023/10/16
 
 ## About
 - [TogoID](https://togoid.dbcls.jp/) は、直感的なインターフェースにより生命科学系データベース(DB)間のつながりを探索的に確認しながらID変換を行うことができるウェブアプリケーションです。同一の実体を指すID間の変換だけでなく、関連する別のカテゴリーのIDへの変換も可能です。また、直接リンクされていないDBのID間でも、他のDBを経由した変換を探索することができます。
@@ -26,9 +26,9 @@ Datasets last updated: 2023/10/10
 
 - [API Documentation (Swagger)](https://togoid.dbcls.jp/apidoc/)
 
-## 統計 (2023/10/10)
+## 統計 (2023/10/16)
 - 対象データセット数 
-    - 96 (69のデータベースに由来)
+    - 99 (71のデータベースに由来)
 - 対象DBの詳細やID例については、"DATASETS" タブ からご覧いただけます。 
 
 ## Web user interface
diff --git a/log/config-summary.tsv b/log/config-summary.tsv
index 607dbd7d..8966c554 100644
--- a/log/config-summary.tsv
+++ b/log/config-summary.tsv
@@ -1,13 +1,13 @@
 db_pair	s_catalog	s_category	s_label	s_prefix	t_catalog	t_category	t_label	t_prefix	f_predicate	f_label	f_display	r_predicate	r_label	r_display	u_freq	u_method
 affy_probeset-ncbigene	FIXME	Probe	Affymetrix probeset	http://identifiers.org/affy.probeset/	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	tio:TIO_000031	probe detects gene or transcript	detects	tio:TIO_000030	gene or transcript is target of probe	is target of	freeze	"sparql_csv2tsv.sh query.rq https://orth.dbcls.jp/sparql-dev"
-assembly_insdc-bioproject	FIXME	Genome	Assembly INSDC	http://identifiers.org/insdc.gca/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000078	genome is sequenced in project	is sequenced in	tio:TIO_000079	project determines genome sequence	determines genome sequence	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/assembly_genome-bp/assembly_genome2bp.tsv"
-assembly_insdc-biosample	FIXME	Genome	Assembly INSDC	http://identifiers.org/insdc.gca/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000080	genome is sequenced with sample	is sequenced with	tio:TIO_000081	sample is used to sequence genome	is used to sequence	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/assembly_genome-bs/assembly_genome2bs.tsv"
-assembly_insdc-insdc_master	FIXME	Genome	Assembly INSDC	http://identifiers.org/insdc.gca/	nbdc02567	Project	INSDC master	http://identifiers.org/insdc/	tio:TIO_000078	genome is sequenced in project	is sequenced in	tio:TIO_000079	project determines genome sequence	determines genome sequence	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/assembly_genome-insdc/assembly_genome2insdc.tsv"
-bioproject-biosample	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000094	project analyzes sample	analyzes	tio:TIO_000095	sample is analyzed in project	is analyzed in	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/bioproject-biosample/bioproject2biosample.tsv"
+assembly_insdc-bioproject	FIXME	Genome	Assembly INSDC	http://identifiers.org/insdc.gca/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000078	genome is sequenced in project	is sequenced in	tio:TIO_000079	project determines genome sequence	determines genome sequence	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/assembly_genome-bp/assembly_genome2bp.tsv"
+assembly_insdc-biosample	FIXME	Genome	Assembly INSDC	http://identifiers.org/insdc.gca/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000080	genome is sequenced with sample	is sequenced with	tio:TIO_000081	sample is used to sequence genome	is used to sequence	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/assembly_genome-bs/assembly_genome2bs.tsv"
+assembly_insdc-insdc_master	FIXME	Genome	Assembly INSDC	http://identifiers.org/insdc.gca/	nbdc02567	Project	INSDC master	http://identifiers.org/insdc/	tio:TIO_000078	genome is sequenced in project	is sequenced in	tio:TIO_000079	project determines genome sequence	determines genome sequence	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/assembly_genome-insdc/assembly_genome2insdc.tsv"
+bioproject-biosample	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000094	project analyzes sample	analyzes	tio:TIO_000095	sample is analyzed in project	is analyzed in	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/bioproject-biosample/bioproject2biosample.tsv"
 bioproject-geo_series	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	nbdc00080	Project	GEO series	http://identifiers.org/geo/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Monthly	"awk -F \"\\t\" '$2==\"GEO\"{print $1 \"\\t\" $3}' $TOGOID_ROOT/input/bioproject/bioproject.tsv"
 bioproject-pubmed	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	nbdc00179	Literature	PubMed	http://rdf.ncbi.nlm.nih.gov/pubmed/	tio:TIO_000032	has reference	has reference	tio:TIO_000033	is reference of	is reference of	Monthly	"awk -F \"\\t\" '$2==\"PubMed\"{print $1 \"\\t\" $3}' $TOGOID_ROOT/input/bioproject/bioproject.tsv"
-bioproject_umbrella-bioproject	nbdc00476	Project	BioProject umbrella	http://identifiers.org/bioproject/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000106	has member	has member	tio:TIO_000107	is member of	is member of	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/bioproject_umbrella-bioproject/bioproject_umbrella2bioproject.tsv"
-biosample-bioproject	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000095	sample is analyzed in project	is analyzed in	tio:TIO_000094	project analyzes sample	analyzes	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/biosample-bioproject/biosample2bioproject.tsv"
+bioproject_umbrella-bioproject	nbdc00476	Project	BioProject umbrella	http://identifiers.org/bioproject/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000106	has member	has member	tio:TIO_000107	is member of	is member of	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/bioproject_umbrella-bioproject/bioproject_umbrella2bioproject.tsv"
+biosample-bioproject	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000095	sample is analyzed in project	is analyzed in	tio:TIO_000094	project analyzes sample	analyzes	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/biosample-bioproject/biosample2bioproject.tsv"
 cellosaurus-ncit_disease	nbdc02180	CellLine	Cellosaurus	http://www.cellosaurus.org/CVCL_	FIXME	Phenotype	NCIT disease	http://purl.obolibrary.org/obo/NCIT_	tio:TIO_000082	cell line is model of phenotype	is model of	tio:TIO_000083	phenotype is observed in cell line	is observed in	Quarterly	"awk 'BEGIN{RS=\"\\n//\\n\";FS=\"\\n\"}{ncit=\"\";for(i=1;i<=NF;i++){if($i~/^AC/){ac=substr($i,11)}if($i~/^DI   NCIt;/){split($i,b,\"; \");ncit=b[2]}}if(ncit)print ac \"\\t\" ncit}' $TOGOID_ROOT/input/cellosaurus/cellosaurus.txt"
 cellosaurus-orphanet_phenotype	nbdc02180	CellLine	Cellosaurus	http://www.cellosaurus.org/CVCL_	nbdc01422	Phenotype	Orphanet phenotype	http://identifiers.org/orphanet.ordo/Orphanet_	tio:TIO_000082	cell line is model of phenotype	is model of	tio:TIO_000083	phenotype is observed in cell line	is observed in	Quarterly	"awk 'BEGIN{RS=\"\\n//\\n\";FS=\"\\n\"}{ordo=\"\";for(i=1;i<=NF;i++){if($i~/^AC/){ac=substr($i,11)}if($i~/^DI   ORDO;/){split($i,b,\"; \");ordo=substr(b[2],10)}}if(ordo)print ac \"\\t\" ordo}' $TOGOID_ROOT/input/cellosaurus/cellosaurus.txt"
 chebi-inchi_key	nbdc00027	Compound	ChEBI compound	http://purl.obolibrary.org/obo/CHEBI_	FIXME	Compound	InChIKey	http://identifiers.org/inchikey/	tio:TIO_000020	compound is represented as InChIKey	is represented as	tio:TIO_000021	InChIKey represents compound	represents	threeTimesAYear	"sparql_csv2tsv.sh query.rq https://rdfportal.org/ebi/sparql"
@@ -28,7 +28,7 @@ chembl_target-pdb	nbdc02555	Protein	ChEMBL target	http://identifiers.org/chembl.
 chembl_target-pfam	nbdc02555	Protein	ChEMBL target	http://identifiers.org/chembl.target/	nbdc00163	Domain	Pfam	http://identifiers.org/pfam/	tio:TIO_000013	protein has protein domain	has protein domain	tio:TIO_000015	protein domain is in protein	is in protein	Monthly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/ebi/sparql"
 chembl_target-reactome_pathway	nbdc02555	Protein	ChEMBL target	http://identifiers.org/chembl.target/	nbdc00185	Pathway	Reactome pathway	http://identifiers.org/reactome/	tio:TIO_000069	molecule participates in pathway	participates in pathway	tio:TIO_000068	pathway has participant molecule	has participant molecule	Monthly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/ebi/sparql"
 chembl_target-uniprot	nbdc02555	Protein	ChEMBL target	http://identifiers.org/chembl.target/	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	Monthly	"sparql_thread.pl -t 10"
-clinvar-medgen	nbdc01514	Variant	ClinVar variant	http://identifiers.org/clinvar/	nbdc02560	Phenotype	MedGen	http://identifiers.org/medgen/	tio:TIO_000010	has related phenotype	has related phenotype	tio:TIO_000011	phenotype is related with	is related with	Monthly	"curl -sL https://grch38.togovar.org/public/togoid/clinvar-medgen.tsv"
+clinvar-medgen	nbdc01514	Variant	ClinVar variant	http://identifiers.org/clinvar/	nbdc02560	Phenotype	MedGen	http://identifiers.org/medgen/	tio:TIO_000010	has related phenotype	has related phenotype	tio:TIO_000011	phenotype is related with	is related with	Monthly	"curl -sSL https://grch38.togovar.org/public/togoid/clinvar-medgen.tsv"
 cog-insdc	nbdc00397	Ortholog	COG	https://www.ncbi.nlm.nih.gov/research/cog/cog/	nbdc02567	Gene	GenBank/ENA/DDBJ	http://identifiers.org/insdc/	tio:TIO_000018	orthologous group has member sequence	has orthologous group member	tio:TIO_000019	sequence is member of orthologous group	is member of orthologous group	Irregular	"awk -F ',' '$3~/^[A-V][A-Z]{2}[0-9]{5}\\.[0-9]+$/ {sub(/\\.[0-9]+$/,\"\",$3); print $7 \"\\t\" $3}' $TOGOID_ROOT/input/cog/cog-20.cog.csv"
 cog-refseq_protein	nbdc00397	Ortholog	COG	https://www.ncbi.nlm.nih.gov/research/cog/cog/	nbdc00187	Protein	RefSeq protein	http://identifiers.org/refseq/	tio:TIO_000018	orthologous group has member sequence	has orthologous group member	tio:TIO_000019	sequence is member of orthologous group	is member of orthologous group	Irregular	"awk -F ',' '$3~/^[NYW]P_[0-9]+\\.[0-9]+$/ {sub(/\\.[0-9]+$/, \"\", $3); print $7 \"\\t\" $3}' $TOGOID_ROOT/input/cog/cog-20.cog.csv"
 doid-mesh	nbdc00261	Phenotype	Disease ontology	http://purl.obolibrary.org/obo/DOID_	nbdc00132	Phenotype	MeSH	http://id.nlm.nih.gov/mesh/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Irregular	"sparql_csv2tsv.sh query.rq https://rdfportal.org/bioportal/sparql"
@@ -45,8 +45,8 @@ ensembl_transcript-affy_probeset	nbdc00054	Transcript	Ensembl transcript	http://
 ensembl_transcript-go	nbdc00054	Transcript	Ensembl transcript	http://identifiers.org/ensembl/	nbdc00074	Function	Gene ontology	http://purl.obolibrary.org/obo/GO_	tio:TIO_000004	has GO annotation	has GO annotation	tio:TIO_000007	is GO annotation of	is GO annotation of	Quarterly	"sparql_taxon.rb query.rq https://rdfportal.org/ebi/sparql $TOGOID_ROOT/input/ensembl/taxonomy.txt"
 ensembl_transcript-hgnc	nbdc00054	Transcript	Ensembl transcript	http://identifiers.org/ensembl/	nbdc01774	Gene	HGNC	http://identifiers.org/hgnc/	tio:TIO_000034	transcript is transcribed from gene	is transcribed from	tio:TIO_000035	gene is transcribed to transcript	is transcribed to	Quarterly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/ebi/sparql"
 ensembl_transcript-refseq_rna	nbdc00054	Transcript	Ensembl transcript	http://identifiers.org/ensembl/	nbdc00187	Transcript	RefSeq RNA	http://identifiers.org/refseq/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Quarterly	"sparql_taxon.rb query.rq https://rdfportal.org/ebi/sparql $TOGOID_ROOT/input/ensembl/taxonomy.txt"
-gea-bioproject	FIXME	Experiment	GEA	https://ddbj.nig.ac.jp/public/ddbj_database/gea/experiment/E-GEAD-000/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000050	experiment belongs to project	belongs to project	tio:TIO_000040	project performs experiment	performs experiment	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/gea-bioproject/gea2bioproject.tsv"
-gea-biosample	FIXME	Experiment	GEA	https://ddbj.nig.ac.jp/public/ddbj_database/gea/experiment/E-GEAD-000/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000043	experiment captures sample	captures sample	tio:TIO_000053	sample is captured to perform experiment	is captured to perform experiment	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/gea-biosample/gea2biosample.tsv"
+gea-bioproject	FIXME	Experiment	GEA	https://ddbj.nig.ac.jp/public/ddbj_database/gea/experiment/E-GEAD-000/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000050	experiment belongs to project	belongs to project	tio:TIO_000040	project performs experiment	performs experiment	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/gea-bioproject/gea2bioproject.tsv"
+gea-biosample	FIXME	Experiment	GEA	https://ddbj.nig.ac.jp/public/ddbj_database/gea/experiment/E-GEAD-000/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000043	experiment captures sample	captures sample	tio:TIO_000053	sample is captured to perform experiment	is captured to perform experiment	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/gea-biosample/gea2biosample.tsv"
 glytoucan-doid	nbdc01535	Glycan	GlyTouCan	http://identifiers.org/glytoucan/	nbdc00261	Phenotype	Disease ontology	http://purl.obolibrary.org/obo/DOID_	tio:TIO_000010	has related phenotype	has related phenotype	tio:TIO_000011	phenotype is related with	is related with	threeTimesAYear	"sh retrieve.sh"
 glytoucan-ncbigene	nbdc01535	Glycan	GlyTouCan	http://identifiers.org/glytoucan/	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	tio:TIO_000099	glycan is processed by protein coded by gene	is processed by protein coded by gene	tio:TIO_000098	gene codes protein to process glycan	codes protein to process glycan	threeTimesAYear	"sparql_csv2tsv.sh query.rq https://ts.glycosmos.org/sparql"
 glytoucan-uniprot	nbdc01535	Glycan	GlyTouCan	http://identifiers.org/glytoucan/	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	tio:TIO_000060	glycan is attached to protein	is attached to	tio:TIO_000061	protein is modified with glycan	is modified with	threeTimesAYear	"sparql_csv2tsv.sh query.rq https://ts.glycosmos.org/sparql"
@@ -73,19 +73,21 @@ hp_inheritance-omim_phenotype	nbdc02559	Classification	HP Inheritance	http://pur
 hp_phenotype-ncbigene	nbdc02559	Phenotype	HP Phenotype	http://purl.obolibrary.org/obo/HP_	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	tio:TIO_000102	gene is related with symptom	is related with symptom	tio:TIO_000103	symptom is related with gene	is related with gene	Irregular	"sparql_csv2tsv.sh query.rq https://integbio.jp/rdf/sparql"
 hp_phenotype-omim_phenotype	nbdc02559	Phenotype	HP Phenotype	http://purl.obolibrary.org/obo/HP_	nbdc00154	Phenotype	OMIM phenotype	http://identifiers.org/mim/	tio:TIO_000101	symptom is observed in disease	is observed in disease	tio:TIO_000100	disease has symptom	has symptom	Irregular	"awk -F \"\\t\" '$1~/^OMIM/&&$11==\"P\"&&$3!=\"NOT\"{print substr($4,4) \"\\t\" substr($1,6)}' $TOGOID_ROOT/input/hp_phenotype/phenotype.hpoa"
 hp_phenotype-orphanet_phenotype	nbdc02559	Phenotype	HP Phenotype	http://purl.obolibrary.org/obo/HP_	nbdc01422	Phenotype	Orphanet phenotype	http://identifiers.org/orphanet.ordo/Orphanet_	tio:TIO_000101	symptom is observed in disease	is observed in disease	tio:TIO_000100	disease has symptom	has symptom	Irregular	"awk -F \"\\t\" '$1~/^ORPHA/&&$11==\"P\"&&$3!=\"NOT\"{print substr($4,4) \"\\t\" substr($1,7)}' $TOGOID_ROOT/input/hp_phenotype/phenotype.hpoa"
-insdc-bioproject	nbdc02567	Gene	GenBank/ENA/DDBJ	http://identifiers.org/insdc/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000108	sequence is determined in project	is determined in project	tio:TIO_000109	project determines sequence	determines sequence	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/insdc-bioproject/insdc2bioproject.tsv"
-insdc-biosample	nbdc02567	Gene	GenBank/ENA/DDBJ	http://identifiers.org/insdc/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000110	sequence is determined using sample	is determined using sample	tio:TIO_000111	sample is used to determine sequence	is used to determine sequence	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/insdc-biosample/insdc2biosample.tsv"
-insdc_master-bioproject	nbdc02567	Project	INSDC master	http://identifiers.org/insdc/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/insdc_master-bioproject/insdc_master2bioproject.tsv"
-insdc_master-biosample	nbdc02567	Project	INSDC master	http://identifiers.org/insdc/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000094	project analyzes sample	analyzes	tio:TIO_000095	sample is analyzed in project	is analyzed in	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/insdc_master-biosample/insdc_master2biosample.tsv"
+insdc-bioproject	nbdc02567	Gene	GenBank/ENA/DDBJ	http://identifiers.org/insdc/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000108	sequence is determined in project	is determined in project	tio:TIO_000109	project determines sequence	determines sequence	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/insdc-bioproject/insdc2bioproject.tsv"
+insdc-biosample	nbdc02567	Gene	GenBank/ENA/DDBJ	http://identifiers.org/insdc/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000110	sequence is determined using sample	is determined using sample	tio:TIO_000111	sample is used to determine sequence	is used to determine sequence	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/insdc-biosample/insdc2biosample.tsv"
+insdc_master-bioproject	nbdc02567	Project	INSDC master	http://identifiers.org/insdc/	nbdc00476	Project	BioProject	http://identifiers.org/bioproject/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/insdc_master-bioproject/insdc_master2bioproject.tsv"
+insdc_master-biosample	nbdc02567	Project	INSDC master	http://identifiers.org/insdc/	nbdc01983	Sample	BioSample	http://identifiers.org/biosample/	tio:TIO_000094	project analyzes sample	analyzes	tio:TIO_000095	sample is analyzed in project	is analyzed in	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/insdc_master-biosample/insdc_master2biosample.tsv"
 interpro-go	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00074	Function	Gene ontology	http://purl.obolibrary.org/obo/GO_	tio:TIO_000004	has GO annotation	has GO annotation	tio:TIO_000007	is GO annotation of	is GO annotation of	Bimonthly	"awk '!/^!/{print gensub(\"InterPro:\",\"\",\"g\",$1) \"\\t\" gensub(/[^;]*; GO:/,\"\",\"g\")}' $TOGOID_ROOT/input/interpro/interpro2go"
 interpro-pdb	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00156	Structure	PDB	http://rdf.wwpdb.org/pdb/	tio:TIO_000016	protein domain is in structure	is in structure	tio:TIO_000014	structure has protein domain	has protein domain	Bimonthly	"awk -F '\\t' -v db=PDB '$2 == db {print $1 \"\\t\" toupper($3)}' $TOGOID_ROOT/input/interpro/interpro.tsv"
 interpro-pfam	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00163	Domain	Pfam	http://identifiers.org/pfam/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Bimonthly	"awk -F '\\t' -v db=PFAM '$2 == db {print $1 \"\\t\" $3}' $TOGOID_ROOT/input/interpro/interpro.tsv"
+interpro-prosite	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00241	Domain	PROSITE	http://identifiers.org/prosite/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Bimonthly	"awk -F '\\t' -v db=PROSITE '$2 == db {print $1 \"\\t\" $3}' $TOGOID_ROOT/input/interpro/interpro.tsv"
 interpro-pubmed	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00179	Literature	PubMed	http://rdf.ncbi.nlm.nih.gov/pubmed/	tio:TIO_000032	has reference	has reference	tio:TIO_000033	is reference of	is reference of	Bimonthly	"awk -F '\\t' -v db=PUBMED '$2 == db {print $1 \"\\t\" $3}' $TOGOID_ROOT/input/interpro/interpro.tsv"
 interpro-reactome_pathway	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00185	Pathway	Reactome pathway	http://identifiers.org/reactome/	tio:TIO_000073	protein domain participates in pathway	participates in pathway	tio:TIO_000072	pathway has protein domain	has protein domain in pathway	Bimonthly	"awk -F '\\t' -v db=REACTOME '$2 == db {print $1 \"\\t\" $3}' $TOGOID_ROOT/input/interpro/interpro.tsv"
+interpro-smart	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00682	Domain	SMART	http://identifiers.org/smart/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Bimonthly	"awk -F '\\t' -v db=SMART '$2 == db {print $1 \"\\t\" $3}' $TOGOID_ROOT/input/interpro/interpro.tsv"
 interpro-uniprot	nbdc00108	Domain	InterPro	http://identifiers.org/interpro/	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	tio:TIO_000015	protein domain is in protein	is in protein	tio:TIO_000013	protein has protein domain	has protein domain	Bimonthly	"awk -F \"\\t\" '{print $2 \"\\t\" $1}' $TOGOID_ROOT/input/interpro/protein2ipr.dat | sort | uniq"
-jga_study-jga_dataset	nbdc02152	Project	JGA Study	http://ddbj.nig.ac.jp/resource/jga-study/	nbdc02152	Project	JGA Dataset	http://ddbj.nig.ac.jp/resource/jga-dataset/	tio:TIO_000106	has member	has member	tio:TIO_000107	is member of	is member of	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/jga_study-jga_dataset/jga_study2jga_dataset.tsv"
-jga_study-nbdc_human_db	nbdc02152	Project	JGA Study	http://ddbj.nig.ac.jp/resource/jga-study/	nbdc01348	Project	NBDC Human DB	http://humandbs.biosciencedbc.jp/	tio:TIO_000107	is member of	is member of	tio:TIO_000106	has member	has member	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/jga_study-humID/jga_study2humID.tsv"
-jga_study-pubmed	nbdc02152	Project	JGA Study	http://ddbj.nig.ac.jp/resource/jga-study/	nbdc00179	Literature	PubMed	http://rdf.ncbi.nlm.nih.gov/pubmed/	tio:TIO_000032	has reference	has reference	tio:TIO_000033	is reference of	is reference of	Monthly	"curl -s https://ddbj.nig.ac.jp/public/rdf/dblink/jga_study-pubmed_id/jga_study2pubmed_id.tsv"
+jga_study-jga_dataset	nbdc02152	Project	JGA Study	http://ddbj.nig.ac.jp/resource/jga-study/	nbdc02152	Project	JGA Dataset	http://ddbj.nig.ac.jp/resource/jga-dataset/	tio:TIO_000106	has member	has member	tio:TIO_000107	is member of	is member of	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/jga_study-jga_dataset/jga_study2jga_dataset.tsv"
+jga_study-nbdc_human_db	nbdc02152	Project	JGA Study	http://ddbj.nig.ac.jp/resource/jga-study/	nbdc01348	Project	NBDC Human DB	http://humandbs.biosciencedbc.jp/	tio:TIO_000107	is member of	is member of	tio:TIO_000106	has member	has member	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/jga_study-humID/jga_study2humID.tsv"
+jga_study-pubmed	nbdc02152	Project	JGA Study	http://ddbj.nig.ac.jp/resource/jga-study/	nbdc00179	Literature	PubMed	http://rdf.ncbi.nlm.nih.gov/pubmed/	tio:TIO_000032	has reference	has reference	tio:TIO_000033	is reference of	is reference of	Monthly	"curl -sS https://ddbj.nig.ac.jp/public/rdf/dblink/jga_study-pubmed_id/jga_study2pubmed_id.tsv"
 lipidmaps-chebi	FIXME	Lipid	LIPID MAPS	http://identifiers.org/lipidmaps/	nbdc00027	Compound	ChEBI compound	http://purl.obolibrary.org/obo/CHEBI_	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	Weekly	"sparql_csv2tsv.sh query.rq https://lipidmaps.org/sparql"
 lipidmaps-inchi_key	FIXME	Lipid	LIPID MAPS	http://identifiers.org/lipidmaps/	FIXME	Compound	InChIKey	http://identifiers.org/inchikey/	tio:TIO_000020	compound is represented as InChIKey	is represented as	tio:TIO_000021	InChIKey represents compound	represents	Weekly	"sparql_csv2tsv.sh query.rq https://lipidmaps.org/sparql"
 lipidmaps-swisslipids	FIXME	Lipid	LIPID MAPS	http://identifiers.org/lipidmaps/	nbdc02026	Lipid	SwissLipids	http://identifiers.org/slm/SLM:	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	Weekly	"sparql_csv2tsv.sh query.rq https://lipidmaps.org/sparql"
@@ -125,10 +127,10 @@ ncbigene-wormbase_gene	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/
 ncbigene-xenbase_gene	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	nbdc01892	Gene	Xenbase gene	http://identifiers.org/xenbase/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Weekly	"awk -F '\\t' -v 'db=Xenbase' 'match($6, db \":\"){split($6,a,\"|\");for(k in a){if(match(a[k], \"^\" db \":\"))print $2 \"\\t\" substr(a[k],length(db)+2)}}' $TOGOID_ROOT/input/ncbigene/gene_info"
 ncbigene-zfin_gene	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	nbdc00746	Gene	ZFIN gene	http://identifiers.org/zfin/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Weekly	"awk -F '\\t' -v 'db=ZFIN' 'match($6, db \":\"){split($6,a,\"|\");for(k in a){if(match(a[k], \"^\" db \":\"))print $2 \"\\t\" substr(a[k],length(db)+2)}}' $TOGOID_ROOT/input/ncbigene/gene_info"
 ncit_disease-ncit_tissue	FIXME	Phenotype	NCIT disease	http://purl.obolibrary.org/obo/NCIT_	FIXME	Anatomy	NCIT tissue	http://purl.obolibrary.org/obo/NCIT_	tio:TIO_000086	phenotype is observed in anatomic site	is observed in anatomic site	tio:TIO_000087	anatomic site can have phenotype	can have phenotype	Irregular	"sparql_csv2tsv.sh query.rq https://sparql.hegroup.org/sparql/"
-oma_protein-ensembl_gene	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00054	Gene	Ensembl gene	http://identifiers.org/ensembl/	tio:TIO_000024	protein is product of gene	is product of gene	tio:TIO_000025	gene has protein as product	has gene product	twoTimesAYear	"sparql_taxon.rb query.rq https://sparql.omabrowser.org/sparql/ $TOGOID_ROOT/input/oma/taxonomy.txt"
-oma_protein-ensembl_transcript	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00054	Transcript	Ensembl transcript	http://identifiers.org/ensembl/	tio:TIO_000037	protein is translated from transcript	is tranlated from	tio:TIO_000036	transcript is translated to protein	is translated to	twoTimesAYear	"sparql_taxon.rb query.rq https://sparql.omabrowser.org/sparql/ $TOGOID_ROOT/input/oma/taxonomy.txt"
-oma_protein-ncbigene	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	tio:TIO_000024	protein is product of gene	is product of gene	tio:TIO_000025	gene has protein as product	has gene product	twoTimesAYear	"zcat $TOGOID_ROOT/input/oma/oma-entrez.txt.gz | awk -F \"\\t\" '/^[^#]/{split($2, a, \"; \"); for(k in a){print $1 \"\\t\" a[k]}}'"
-oma_protein-uniprot	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	twoTimesAYear	"zgrep -vE \"(^#)|_\" $TOGOID_ROOT/input/oma/oma-uniprot.txt.gz"
+oma_protein-ensembl_gene	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00054	Gene	Ensembl gene	http://identifiers.org/ensembl/	tio:TIO_000024	protein is product of gene	is product of gene	tio:TIO_000025	gene has protein as product	has gene product	twoTimesAYear	"sparql_taxon.rb query.rq https://sparql.omabrowser.org/sparql/ $TOGOID_ROOT/input/oma_protein/taxonomy.txt"
+oma_protein-ensembl_transcript	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00054	Transcript	Ensembl transcript	http://identifiers.org/ensembl/	tio:TIO_000037	protein is translated from transcript	is tranlated from	tio:TIO_000036	transcript is translated to protein	is translated to	twoTimesAYear	"sparql_taxon.rb query.rq https://sparql.omabrowser.org/sparql/ $TOGOID_ROOT/input/oma_protein/taxonomy.txt"
+oma_protein-ncbigene	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	tio:TIO_000024	protein is product of gene	is product of gene	tio:TIO_000025	gene has protein as product	has gene product	twoTimesAYear	"zcat $TOGOID_ROOT/input/oma_protein/oma-entrez.txt.gz | awk -F \"\\t\" '/^[^#]/{split($2, a, \"; \"); for(k in a){print $1 \"\\t\" a[k]}}'"
+oma_protein-uniprot	nbdc02221	Protein	OMA protein	http://identifiers.org/oma.protein/	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	twoTimesAYear	"zgrep -vE \"(^#)|_\" $TOGOID_ROOT/input/oma_protein/oma-uniprot.txt.gz"
 orphanet_gene-ensembl_gene	nbdc01422	Gene	Orphanet gene	http://identifiers.org/orphanet.ordo/Orphanet_	nbdc00054	Gene	Ensembl gene	http://identifiers.org/ensembl/	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	Irregular	"sparql_csv2tsv.sh query.rq https://rdfportal.org/bioportal/sparql"
 orphanet_gene-hgnc	nbdc01422	Gene	Orphanet gene	http://identifiers.org/orphanet.ordo/Orphanet_	nbdc01774	Gene	HGNC	http://identifiers.org/hgnc/	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	Irregular	"sparql_csv2tsv.sh query.rq https://rdfportal.org/bioportal/sparql"
 orphanet_gene-omim_gene	nbdc01422	Gene	Orphanet gene	http://identifiers.org/orphanet.ordo/Orphanet_	nbdc00154	Gene	OMIM gene	http://identifiers.org/mim/	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	Irregular	"sparql_csv2tsv.sh query.rq https://rdfportal.org/bioportal/sparql"
@@ -142,6 +144,7 @@ pdb-interpro	nbdc00156	Structure	PDB	http://rdf.wwpdb.org/pdb/	nbdc00108	Domain
 pdb-pdb_ccd	nbdc00156	Structure	PDB	http://rdf.wwpdb.org/pdb/	nbdc01766	Compound	PDB CCD	http://identifiers.org/pdb-ccd/	tio:TIO_000096	3D structure has compound	has compound	tio:TIO_000097	compound is component of 3D structure	is component of	Monthly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/pdb/sparql"
 pdb-pfam	nbdc00156	Structure	PDB	http://rdf.wwpdb.org/pdb/	nbdc00163	Domain	Pfam	http://identifiers.org/pfam/	tio:TIO_000013	protein has protein domain	has protein domain	tio:TIO_000015	protein domain is in protein	is in protein	Monthly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/pdb/sparql"
 pdb-uniprot	nbdc00156	Structure	PDB	http://rdf.wwpdb.org/pdb/	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	tio:TIO_000027	is 3D structure of protein	is 3D structure of	tio:TIO_000026	protein has 3D structure	has 3D structure	Monthly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/pdb/sparql"
+prosite-prosite_prorule	nbdc00241	Domain	PROSITE	http://identifiers.org/prosite/	nbdc00241	AnnotationRule	PROSITE ProRule	https://prosite.expasy.org/rule/	tio:TIO_000114	domain has annotation rule	has annotation rule	tio:TIO_000115	is annotation rule of	is annotation rule of	Bimonthly	"awk -f $TOGOID_ROOT/bin/prosite_prorule.awk $TOGOID_ROOT/input/prosite/prosite.dat"
 pubchem_compound-atc	nbdc00641	Compound	PubChem compound	http://rdf.ncbi.nlm.nih.gov/pubchem/compound/CID	FIXME	Drug	ATC classification	http://identifiers.org/atc/	tio:TIO_000088	drug classification classifies compound	classifies	tio:TIO_000089	compound is classified as drug classification	is classified as	Monthly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/pubchem/sparql"
 pubchem_compound-chebi	nbdc00641	Compound	PubChem compound	http://rdf.ncbi.nlm.nih.gov/pubchem/compound/CID	nbdc00027	Compound	ChEBI compound	http://purl.obolibrary.org/obo/CHEBI_	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Weekly	"sparql_csv2tsv.sh query.rq https://rdfportal.org/pubchem/sparql"
 pubchem_compound-chembl_compound	nbdc00641	Compound	PubChem compound	http://rdf.ncbi.nlm.nih.gov/pubchem/compound/CID	nbdc02555	Compound	ChEMBL compound	http://identifiers.org/chembl.compound/	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Weekly	"bash retrieve.sh"
@@ -202,13 +205,13 @@ swisslipids-hmdb	nbdc02026	Lipid	SwissLipids	http://identifiers.org/slm/SLM:	nbd
 swisslipids-inchi_key	nbdc02026	Lipid	SwissLipids	http://identifiers.org/slm/SLM:	FIXME	Compound	InChIKey	http://identifiers.org/inchikey/	tio:TIO_000020	compound is represented as InChIKey	is represented as	tio:TIO_000021	InChIKey represents compound	represents	Irregular	"awk -F '\\t' 'FNR!=1 && $11 && $11!=\"-\" && $11!~/none$/{print gensub(\"SLM:\",\"\",\"g\",$1) \"\\t\" gensub(\"InChIKey=\",\"\",\"g\",$11)}' $TOGOID_ROOT/input/swisslipids/lipids.tsv"
 taxonomy-pubmed	nbdc00700	Organism	Taxonomy	http://identifiers.org/taxonomy/	nbdc00179	Literature	PubMed	http://rdf.ncbi.nlm.nih.gov/pubmed/	tio:TIO_000032	has reference	has reference	tio:TIO_000033	is reference of	is reference of	Daily	"awk 'BEGIN{FS=\"\\|\"}$4!=0 {split($7,a,\" \");for(k in a){gsub(/\\t/,\"\",$4); print a[k] \"\\t\"  $4}}' ${TOGOID_ROOT}/input/taxonomy/taxdump/citations.dmp"
 togovar-clinvar	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc01514	Variant	ClinVar variant	http://identifiers.org/clinvar/	tio:TIO_000058	variant has clinical significance	has clinical significance	tio:TIO_000059	is clinical significance of	is clinical significance of	Monthly	"sparql_csv2tsv.sh query.rq https://grch38.togovar.org/sparql"
-togovar-dbsnp	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00206	Variant	dbSNP	http://identifiers.org/dbsnp/	tio:TIO_000003	variant has corresponding variant	has corresponding variant	tio:TIO_000003	variant has corresponding variant	has corresponding variant	Bimonthly	"curl -sL https://grch38.togovar.org/public/togoid/tgvid2dbsnp.tsv"
-togovar-ensembl_gene	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00054	Gene	Ensembl gene	http://identifiers.org/ensembl/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Bimonthly	"curl -sL https://grch38.togovar.org/public/togoid/tgvid2ensembl.tsv"
-togovar-ensembl_transcript	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00054	Transcript	Ensembl transcript	http://identifiers.org/ensembl/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Bimonthly	"curl -sL https://grch38.togovar.org/public/togoid/tgvid2ensembl.transcript.tsv"
-togovar-hgnc	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc01774	Gene	HGNC	http://identifiers.org/hgnc/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Monthly	"curl -sL https://grch38.togovar.org/public/togoid/tgvid2hgnc.tsv"
-togovar-ncbigene	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Monthly	"curl -sL https://grch38.togovar.org/public/togoid/tgvid2ncbigene.tsv"
-togovar-pubmed	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00179	Literature	PubMed	http://rdf.ncbi.nlm.nih.gov/pubmed/	tio:TIO_000032	has reference	has reference	tio:TIO_000033	is reference of	is reference of	Monthly	"curl -sL https://grch38.togovar.org/public/togoid/tgvid2pubmed.tsv"
-togovar-refseq_rna	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00187	Transcript	RefSeq RNA	http://identifiers.org/refseq/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Monthly	"curl -sL https://grch38.togovar.org/public/togoid/tgvid2refseqmRNA.tsv"
+togovar-dbsnp	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00206	Variant	dbSNP	http://identifiers.org/dbsnp/	tio:TIO_000003	variant has corresponding variant	has corresponding variant	tio:TIO_000003	variant has corresponding variant	has corresponding variant	Bimonthly	"curl -sSL https://grch38.togovar.org/public/togoid/tgvid2dbsnp.tsv"
+togovar-ensembl_gene	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00054	Gene	Ensembl gene	http://identifiers.org/ensembl/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Bimonthly	"curl -sSL https://grch38.togovar.org/public/togoid/tgvid2ensembl.tsv"
+togovar-ensembl_transcript	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00054	Transcript	Ensembl transcript	http://identifiers.org/ensembl/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Bimonthly	"curl -sSL https://grch38.togovar.org/public/togoid/tgvid2ensembl.transcript.tsv"
+togovar-hgnc	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc01774	Gene	HGNC	http://identifiers.org/hgnc/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Monthly	"curl -sSL https://grch38.togovar.org/public/togoid/tgvid2hgnc.tsv"
+togovar-ncbigene	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00073	Gene	NCBI gene	http://identifiers.org/ncbigene/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Monthly	"curl -sSL https://grch38.togovar.org/public/togoid/tgvid2ncbigene.tsv"
+togovar-pubmed	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00179	Literature	PubMed	http://rdf.ncbi.nlm.nih.gov/pubmed/	tio:TIO_000032	has reference	has reference	tio:TIO_000033	is reference of	is reference of	Monthly	"curl -sSL https://grch38.togovar.org/public/togoid/tgvid2pubmed.tsv"
+togovar-refseq_rna	nbdc02359	Variant	TogoVar variant	http://identifiers.org/togovar/	nbdc00187	Transcript	RefSeq RNA	http://identifiers.org/refseq/	tio:TIO_000062	variant is located in sequence	is located in	tio:TIO_000063	sequence has variant	has variant	Monthly	"curl -sSL https://grch38.togovar.org/public/togoid/tgvid2refseqmRNA.tsv"
 uberon-ncit_tissue	FIXME	Anatomy	UBERON	http://purl.obolibrary.org/obo/UBERON_	FIXME	Anatomy	NCIT tissue	http://purl.obolibrary.org/obo/NCIT_	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	tio:TIO_000001	is nearly equivalent to	is nearly equivalent to	Irregular	"sparql_csv2tsv.sh query.rq https://sparql.hegroup.org/sparql/"
 uniprot-chembl_target	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	nbdc02555	Protein	ChEMBL target	http://identifiers.org/chembl.target/	tio:TIO_000002	is equivalent to	is equivalent to	tio:TIO_000002	is equivalent to	is equivalent to	Monthly	"uniprot_idmapping2tsv.rb ${TOGOID_ROOT}/input/uniprot/idmapping.dat.gz ChEMBL"
 uniprot-dbsnp	nbdc00221	Protein	UniProt	http://purl.uniprot.org/uniprot/	nbdc00206	Variant	dbSNP	http://identifiers.org/dbsnp/	tio:TIO_000063	sequence has variant	has variant	tio:TIO_000062	variant is located in sequence	is located in	Monthly	"sparql_thread.pl -t 10"
diff --git a/log/error.log b/log/error.log
index b8889a18..5acb6de0 100644
--- a/log/error.log
+++ b/log/error.log
@@ -1,5 +1,31 @@
 # Error: output/tsv/chembl_target-ensembl_gene.tsv new file size per old 0 / 61845 = 0.0 < 0.5
 # Error: Failed to create output/tsv/chembl_target-ensembl_gene.tsv or created file was empty
+# Error: output/tsv/hgnc-ccds.tsv new file size per old 153 / 505146 = 0.00030288273093323514 < 0.5
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </html>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </html>
+# Error: output/tsv/hgnc-pubmed.tsv new file size per old 153 / 467695 = 0.00032713627470894494 < 0.5
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </html>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </html>
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv new file size per old 201 / 129540 = 0.0015516442797591477 < 0.5
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML <html><head>
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML <title>301 Moved Permanently</title>
@@ -13,4 +39,17 @@
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML <h1>Moved Permanently</h1>
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML <p>The document has moved <a href=https://biosciencedbc.jp/news/20231002-01.html>here</a>.</p>
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML </body></html>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv new file size per old 201 / 2953229 = 6.806109516058525e-05 < 0.5
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <html><head>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <title>301 Moved Permanently</title>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </head><body>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <h1>Moved Permanently</h1>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <p>The document has moved <a href=https://biosciencedbc.jp/news/20231002-01.html>here</a>.</p>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </body></html>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <html><head>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <title>301 Moved Permanently</title>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </head><body>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <h1>Moved Permanently</h1>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <p>The document has moved <a href=https://biosciencedbc.jp/news/20231002-01.html>here</a>.</p>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </body></html>
 # Error: output/tsv/pubchem_compound-atc.tsv new file size per old 28643 / 72636 = 0.39433614185803184 < 0.5
diff --git a/log/pair_count.tsv b/log/pair_count.tsv
index cefd5c27..44bdea97 100644
--- a/log/pair_count.tsv
+++ b/log/pair_count.tsv
@@ -1,12 +1,12 @@
 affy_probeset-ncbigene.tsv	19063
-assembly_insdc-bioproject.tsv	1841329
-assembly_insdc-biosample.tsv	1852679
-assembly_insdc-insdc_master.tsv	1788219
-bioproject-biosample.tsv	2228151
-bioproject-geo_series.tsv	193507
-bioproject-pubmed.tsv	254617
-bioproject_umbrella-bioproject.tsv	95214
-biosample-bioproject.tsv	2228151
+assembly_insdc-bioproject.tsv	1847624
+assembly_insdc-biosample.tsv	1859079
+assembly_insdc-insdc_master.tsv	1794414
+bioproject-biosample.tsv	2233331
+bioproject-geo_series.tsv	193851
+bioproject-pubmed.tsv	254897
+bioproject_umbrella-bioproject.tsv	96055
+biosample-bioproject.tsv	2233331
 cellosaurus-ncit_disease.tsv	68557
 cellosaurus-orphanet_phenotype.tsv	38153
 chebi-inchi_key.tsv	141392
@@ -70,7 +70,7 @@ hmdb-pubchem_compound.tsv	104230
 homologene-ncbigene.tsv	275237
 hp_inheritance-omim_phenotype.tsv	8636
 hp_phenotype-ncbigene.tsv	220065
-hp_phenotype-omim_phenotype.tsv	130011
+hp_phenotype-omim_phenotype.tsv	129729
 hp_phenotype-orphanet_phenotype.tsv	111606
 insdc-bioproject.tsv	59409158
 insdc-biosample.tsv	193975949
@@ -79,14 +79,16 @@ insdc_master-biosample.tsv	1533178
 interpro-go.tsv	30455
 interpro-pdb.tsv	1373272
 interpro-pfam.tsv	20086
+interpro-prosite.tsv	1283
 interpro-pubmed.tsv	108097
 interpro-reactome_pathway.tsv	434061
+interpro-smart.tsv	1275
 interpro-uniprot.tsv	718937142
 jga_study-jga_dataset.tsv	199
 jga_study-nbdc_human_db.tsv	305
 jga_study-pubmed.tsv	130
 lipidmaps-chebi.tsv	12835
-lipidmaps-inchi_key.tsv	47669
+lipidmaps-inchi_key.tsv	47703
 lipidmaps-swisslipids.tsv	12341
 mbgd_gene-uniprot.tsv	137319849
 mbgd_organism-taxonomy.tsv	6318
@@ -103,23 +105,23 @@ mondo-mesh.tsv	8352
 mondo-omim_phenotype.tsv	9693
 mondo-orphanet_phenotype.tsv	10380
 nando-mondo.tsv	2390
-ncbigene-ensembl_gene.tsv	8827223
-ncbigene-ensembl_protein.tsv	10327118
-ncbigene-ensembl_transcript.tsv	10756236
+ncbigene-ensembl_gene.tsv	8893374
+ncbigene-ensembl_protein.tsv	10396075
+ncbigene-ensembl_transcript.tsv	10835017
 ncbigene-flybase_gene.tsv	25107
-ncbigene-go.tsv	2795926
-ncbigene-hgnc.tsv	43673
-ncbigene-mgi.tsv	71706
+ncbigene-go.tsv	2795929
+ncbigene-hgnc.tsv	43698
+ncbigene-mgi.tsv	71704
 ncbigene-mirbase.tsv	17541
 ncbigene-omim_gene.tsv	18338
-ncbigene-refseq_genomic.tsv	203675
-ncbigene-refseq_protein.tsv	58997388
-ncbigene-refseq_rna.tsv	57346678
-ncbigene-rgd.tsv	41846
+ncbigene-refseq_genomic.tsv	211608
+ncbigene-refseq_protein.tsv	59154183
+ncbigene-refseq_rna.tsv	57481146
+ncbigene-rgd.tsv	41844
 ncbigene-sgd.tsv	6464
 ncbigene-tair.tsv	32835
-ncbigene-taxonomy.tsv	48481431
-ncbigene-vgnc.tsv	111966
+ncbigene-taxonomy.tsv	48608284
+ncbigene-vgnc.tsv	112038
 ncbigene-wormbase_gene.tsv	19852
 ncbigene-xenbase_gene.tsv	46220
 ncbigene-zfin_gene.tsv	27126
@@ -141,12 +143,13 @@ pdb-interpro.tsv	726658
 pdb-pdb_ccd.tsv	530587
 pdb-pfam.tsv	339565
 pdb-uniprot.tsv	341431
+prosite-prosite_prorule.tsv	1454
 pubchem_compound-atc.tsv	4812
 pubchem_compound-chebi.tsv	141021
 pubchem_compound-chembl_compound.tsv	2327813
 pubchem_compound-drugbank.tsv	10789
 pubchem_compound-glytoucan.tsv	31767
-pubchem_compound-inchi_key.tsv	115774604
+pubchem_compound-inchi_key.tsv	115200979
 pubchem_pathway-ncbigene.tsv	32308
 pubchem_pathway-pathbank.tsv	69387
 pubchem_pathway-pubchem_compound.tsv	1252527
@@ -164,7 +167,7 @@ reactome_reaction-go.tsv	3335
 reactome_reaction-iuphar_ligand.tsv	15106
 reactome_reaction-mirbase.tsv	182
 reactome_reaction-uniprot.tsv	710946
-refseq_protein-uniprot.tsv	216858058
+refseq_protein-uniprot.tsv	179007771
 refseq_rna-dbsnp.tsv	269555074
 refseq_rna-hgnc.tsv	227884
 refseq_rna-ncbigene.tsv	56393572
@@ -178,28 +181,28 @@ rhea-go.tsv	4382
 rhea-pubmed.tsv	135188
 rhea-reactome_reaction.tsv	1438
 rhea-uniprot.tsv	35862353
-sra_accession-bioproject.tsv	452021
-sra_accession-biosample.tsv	26986675
+sra_accession-bioproject.tsv	452646
+sra_accession-biosample.tsv	27014842
 sra_accession-sra_analysis.tsv	270271
-sra_accession-sra_experiment.tsv	29898659
-sra_accession-sra_project.tsv	529758
-sra_accession-sra_run.tsv	34358950
-sra_accession-sra_sample.tsv	29098319
-sra_experiment-bioproject.tsv	26099112
-sra_experiment-biosample.tsv	26428512
-sra_experiment-sra_project.tsv	26441841
-sra_experiment-sra_sample.tsv	26441609
-sra_project-bioproject.tsv	485064
-sra_run-bioproject.tsv	27821029
-sra_run-biosample.tsv	28150683
-sra_run-sra_experiment.tsv	28225860
-sra_run-sra_project.tsv	28176496
-sra_run-sra_sample.tsv	28162960
-sra_sample-biosample.tsv	26995609
+sra_accession-sra_experiment.tsv	30000181
+sra_accession-sra_project.tsv	532000
+sra_accession-sra_run.tsv	34462502
+sra_accession-sra_sample.tsv	29199454
+sra_experiment-bioproject.tsv	26117237
+sra_experiment-biosample.tsv	26440530
+sra_experiment-sra_project.tsv	26459966
+sra_experiment-sra_sample.tsv	26459734
+sra_project-bioproject.tsv	485689
+sra_run-bioproject.tsv	27841680
+sra_run-biosample.tsv	28165180
+sra_run-sra_experiment.tsv	28248904
+sra_run-sra_project.tsv	28197147
+sra_run-sra_sample.tsv	28183208
+sra_sample-biosample.tsv	27023779
 swisslipids-chebi.tsv	4276
 swisslipids-hmdb.tsv	26026
 swisslipids-inchi_key.tsv	593209
-taxonomy-pubmed.tsv	48570
+taxonomy-pubmed.tsv	48583
 togovar-clinvar.tsv	720705
 togovar-dbsnp.tsv	66877211
 togovar-ensembl_gene.tsv	72473309
@@ -235,7 +238,7 @@ uniprot-uniprot_mnemonic.tsv	252170925
 wikipathways-chebi.tsv	11291
 wikipathways-doid.tsv	946
 wikipathways-hmdb.tsv	4003
-wikipathways-lipidmaps.tsv	1351
-wikipathways-ncbigene.tsv	30063
-wikipathways-uniprot.tsv	33210
-total	4566512632
+wikipathways-lipidmaps.tsv	1352
+wikipathways-ncbigene.tsv	30100
+wikipathways-uniprot.tsv	33205
+total	4529294801
diff --git a/log/update.log b/log/update.log
index 96cead80..779e76e3 100644
--- a/log/update.log
+++ b/log/update.log
@@ -1,21 +1,22 @@
-*** Started: 2023-10-06T17:00:15 ***
+*** Started: 2023-10-13T17:00:15 ***
 
 ## Prepare input files for Bioproject
 # Checking lock file input/bioproject/download.lock for download
-# Local file time:  2023-09-27 19:50:53 +0900 (input/bioproject/bioproject.xml)
-# Remote file time: 2023-10-05 11:19:00 +0000 (https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml)
+# Local file time:  2023-10-05 20:19:00 +0900 (input/bioproject/bioproject.xml)
+# Remote file time: 2023-10-12 11:58:31 +0000 (https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/bioproject https://ftp.ncbi.nlm.nih.gov/bioproject/bioproject.xml
 python bin/bioproject_xml2tsv.py input/bioproject/bioproject.xml > input/bioproject/bioproject.tsv
 # Overwriting timestamp of the input/bioproject/download.lock
 ## Prepare input files for Cellosaurus
 # Checking lock file input/cellosaurus/download.lock for download
-# Local file time:  2023-06-29 16:20:13 +0900 (input/cellosaurus/cellosaurus.txt)
+# Local file time:  2023-10-05 17:17:42 +0900 (input/cellosaurus/cellosaurus.txt)
 # Remote file time: 2023-10-05 08:17:42 +0000 (https://ftp.expasy.org/databases/cellosaurus/cellosaurus.txt)
-wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/cellosaurus https://ftp.expasy.org/databases/cellosaurus/cellosaurus.txt
-# Overwriting timestamp of the input/cellosaurus/download.lock
+# Local file size:  99116327 (input/cellosaurus/cellosaurus.txt)
+# Remote file size: 99116327 (https://ftp.expasy.org/databases/cellosaurus/cellosaurus.txt)
+# Preserving timestamp of the input/cellosaurus/download.lock
 ## Prepare input files for Ensembl
 # Checking lock file input/ensembl/download.lock for download
-# File input/ensembl/taxonomy.txt is created 7.000094184319039 days ago (will be updated when >5 days)
+# File input/ensembl/taxonomy.txt is created 6.999884341636366 days ago (will be updated when >5 days)
 sparql_csv2tsv.sh input/ensembl/taxonomy.rq https://rdfportal.org/ebi/sparql > input/ensembl/taxonomy.txt
 # Overwriting timestamp of the input/ensembl/download.lock
 ## Prepare input files for HMDB
@@ -35,14 +36,12 @@ sparql_csv2tsv.sh input/ensembl/taxonomy.rq https://rdfportal.org/ebi/sparql > i
 ## Prepare input files for HP Phenotype
 # Checking lock file input/hp_phenotype/download.lock for download
 # Local file time:  2023-09-02 02:00:42 +0900 (input/hp_phenotype/phenotype.hpoa)
-# Remote file time: 2023-09-01 17:00:42 +0000 (http://purl.obolibrary.org/obo/hp/hpoa/phenotype.hpoa)
-# Local file size:  31733422 (input/hp_phenotype/phenotype.hpoa)
-# Remote file size: 31733422 (http://purl.obolibrary.org/obo/hp/hpoa/phenotype.hpoa)
+# Remote file time: 2023-10-09 20:01:55 +0000 (http://purl.obolibrary.org/obo/hp/hpoa/phenotype.hpoa)
+wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/hp_phenotype http://purl.obolibrary.org/obo/hp/hpoa/phenotype.hpoa
 # Local file time:  2023-09-02 01:59:40 +0900 (input/hp_phenotype/genes_to_phenotype.txt)
-# Remote file time: 2023-09-01 16:59:40 +0000 (http://purl.obolibrary.org/obo/hp/hpoa/genes_to_phenotype.txt)
-# Local file size:  18594201 (input/hp_phenotype/genes_to_phenotype.txt)
-# Remote file size: 18594201 (http://purl.obolibrary.org/obo/hp/hpoa/genes_to_phenotype.txt)
-# Preserving timestamp of the input/hp_phenotype/download.lock
+# Remote file time: 2023-10-09 19:59:50 +0000 (http://purl.obolibrary.org/obo/hp/hpoa/genes_to_phenotype.txt)
+wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/hp_phenotype http://purl.obolibrary.org/obo/hp/hpoa/genes_to_phenotype.txt
+# Overwriting timestamp of the input/hp_phenotype/download.lock
 ## Prepare input files for COG
 # Checking lock file input/cog/download.lock for download
 # Local file time:  2020-09-11 10:37:40 +0900 (input/cog/cog-20.cog.csv)
@@ -71,35 +70,47 @@ sparql_csv2tsv.sh input/ensembl/taxonomy.rq https://rdfportal.org/ebi/sparql > i
 # Preserving timestamp of the input/interpro/download.lock
 ## Prepare input files for NCBI Gene
 # Checking lock file input/ncbigene/download.lock for download
-# Local file time:  2023-09-29 13:08:19 +0900 (input/ncbigene/gene2refseq.gz)
-# Remote file time: 2023-10-06 03:53:33 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz)
+# Local file time:  2023-10-06 12:53:33 +0900 (input/ncbigene/gene2refseq.gz)
+# Remote file time: 2023-10-13 04:06:22 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2refseq.gz
 gzip -dc input/ncbigene/gene2refseq.gz > input/ncbigene/gene2refseq
-# Local file time:  2023-09-29 13:05:47 +0900 (input/ncbigene/gene2ensembl.gz)
-# Remote file time: 2023-10-06 03:51:16 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz)
+# Local file time:  2023-10-06 12:51:16 +0900 (input/ncbigene/gene2ensembl.gz)
+# Remote file time: 2023-10-13 04:03:59 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2ensembl.gz
 gzip -dc input/ncbigene/gene2ensembl.gz > input/ncbigene/gene2ensembl
-# Local file time:  2023-09-29 13:05:51 +0900 (input/ncbigene/gene2go.gz)
-# Remote file time: 2023-10-06 03:51:19 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz)
+# Local file time:  2023-10-06 12:51:19 +0900 (input/ncbigene/gene2go.gz)
+# Remote file time: 2023-10-13 04:04:02 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene2go.gz
 gzip -dc input/ncbigene/gene2go.gz > input/ncbigene/gene2go
-# Local file time:  2023-09-29 13:14:09 +0900 (input/ncbigene/Homo_sapiens.gene_info.gz)
-# Remote file time: 2023-10-06 03:59:12 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz)
+# Local file time:  2023-10-06 12:59:12 +0900 (input/ncbigene/Homo_sapiens.gene_info.gz)
+# Remote file time: 2023-10-13 04:12:30 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/GENE_INFO/Mammalia/Homo_sapiens.gene_info.gz
 gzip -dc input/ncbigene/Homo_sapiens.gene_info.gz > input/ncbigene/Homo_sapiens.gene_info
-# Local file time:  2023-09-29 13:09:53 +0900 (input/ncbigene/gene_info.gz)
-# Remote file time: 2023-10-06 03:55:06 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz)
+# Local file time:  2023-10-06 12:55:06 +0900 (input/ncbigene/gene_info.gz)
+# Remote file time: 2023-10-13 04:07:55 +0000 (https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/ncbigene https://ftp.ncbi.nih.gov/gene/DATA/gene_info.gz
 gzip -dc input/ncbigene/gene_info.gz > input/ncbigene/gene_info
 # Overwriting timestamp of the input/ncbigene/download.lock
-## Prepare input files for OMA
-# Checking lock file input/oma/download.lock for download
-wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/oma https://omabrowser.org/All/oma-entrez.txt.gz
-mkdir -p input/oma
-wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/oma https://omabrowser.org/All/oma-species.txt
-wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/oma https://omabrowser.org/All/oma-uniprot.txt.gz
-awk -F "	" '$4=="Ensembl" && $5~/Ensembl (Vertebrates )?[0-9]+;/ && $1!="YEAST"{print $2}' input/oma/oma-species.txt > input/oma/taxonomy.txt
-# Overwriting timestamp of the input/oma/download.lock
+## Prepare input files for OMA protein
+# Checking lock file input/oma_protein/download.lock for download
+# Local file time:  2022-11-05 22:16:44 +0900 (input/oma_protein/oma-entrez.txt.gz)
+# Remote file time: 2022-11-05 13:16:44 +0000 (https://omabrowser.org/All/oma-entrez.txt.gz)
+# Local file size:  29004061 (input/oma_protein/oma-entrez.txt.gz)
+# Remote file size: 29004061 (https://omabrowser.org/All/oma-entrez.txt.gz)
+# Local file time:  2022-11-05 16:05:59 +0900 (input/oma_protein/oma-species.txt)
+# Remote file time: 2022-11-05 07:05:59 +0000 (https://omabrowser.org/All/oma-species.txt)
+# Local file size:  296176 (input/oma_protein/oma-species.txt)
+# Remote file size: 296176 (https://omabrowser.org/All/oma-species.txt)
+# Local file time:  2022-11-05 22:16:36 +0900 (input/oma_protein/oma-uniprot.txt.gz)
+# Remote file time: 2022-11-05 13:16:36 +0000 (https://omabrowser.org/All/oma-uniprot.txt.gz)
+# Local file size:  95634890 (input/oma_protein/oma-uniprot.txt.gz)
+# Remote file size: 95634890 (https://omabrowser.org/All/oma-uniprot.txt.gz)
+# Preserving timestamp of the input/oma_protein/download.lock
+## Prepare input files for PROSITE
+# Checking lock file input/prosite/download.lock for download
+wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/prosite https://ftp.expasy.org/databases/prosite/prosite.dat
+mkdir -p input/prosite
+# Overwriting timestamp of the input/prosite/download.lock
 ## Prepare input files for Reactome
 # Checking lock file input/reactome/download.lock for download
 # Local file time:  2023-09-01 12:02:42 +0900 (input/reactome/UniProt2ReactomeReactions.txt)
@@ -153,8 +164,8 @@ awk -F "	" '$4=="Ensembl" && $5~/Ensembl (Vertebrates )?[0-9]+;/ && $1!="YEAST"{
 # Preserving timestamp of the input/reactome/download.lock
 ## Prepare input files for RefSeq Protein
 # Checking lock file input/refseq_protein/download.lock for download
-# Local file time:  2023-09-27 18:26:49 +0900 (input/refseq_protein/gene_refseq_uniprotkb_collab.gz)
-# Remote file time: 2023-10-04 09:32:58 +0000 (https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz)
+# Local file time:  2023-10-04 18:32:58 +0900 (input/refseq_protein/gene_refseq_uniprotkb_collab.gz)
+# Remote file time: 2023-10-11 09:26:20 +0000 (https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/refseq_protein https://ftp.ncbi.nlm.nih.gov/refseq/uniprotkb/gene_refseq_uniprotkb_collab.gz
 # Overwriting timestamp of the input/refseq_protein/download.lock
 ## Prepare input files for RefSeq RNA
@@ -181,8 +192,8 @@ wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-
 # Preserving timestamp of the input/rhea/download.lock
 ## Prepare input files for SRA
 # Checking lock file input/sra/download.lock for download
-# Local file time:  2023-09-29 03:32:19 +0900 (input/sra/SRA_Accessions.tab)
-# Remote file time: 2023-10-05 18:52:28 +0000 (https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab)
+# Local file time:  2023-10-06 03:52:28 +0900 (input/sra/SRA_Accessions.tab)
+# Remote file time: 2023-10-13 06:51:31 +0000 (https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/sra https://ftp.ncbi.nlm.nih.gov/sra/reports/Metadata/SRA_Accessions.tab
 # Overwriting timestamp of the input/sra/download.lock
 ## Prepare input files for SwissLipids
@@ -206,276 +217,255 @@ wget --quiet --no-check-certificate -O input/uniprot/uniprot_reference_proteome.
 # Preserving timestamp of the input/uniprot/download.lock
 ## Prepare input files for Taxonomy
 # Checking lock file input/taxonomy/download.lock for download
-# Local file time:  2023-09-29 17:28:31 +0900 (input/taxonomy/taxdump.tar.gz)
-# Remote file time: 2023-10-06 08:29:35 +0000 (https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz)
+# Local file time:  2023-10-06 17:29:35 +0900 (input/taxonomy/taxdump.tar.gz)
+# Remote file time: 2023-10-13 08:29:15 +0000 (https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz)
 wget --quiet --recursive --no-parent --no-directories --timestamping --no-check-certificate --directory-prefix input/taxonomy https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz
 mkdir -p input/taxonomy/taxdump && tar xzf input/taxonomy/taxdump.tar.gz -C input/taxonomy/taxdump/
 # Overwriting timestamp of the input/taxonomy/download.lock
 ### Update TSV for affy_probeset-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/affy_probeset-ncbigene.tsv is newer than config/affy_probeset-ncbigene/config.yaml
 # File output/tsv/affy_probeset-ncbigene.tsv has no timestamp file
-# File output/tsv/affy_probeset-ncbigene.tsv is created 6.998800858212349 days ago (will be updated when >5 days)
+# File output/tsv/affy_probeset-ncbigene.tsv is created 6.999908460951285 days ago (will be updated when >5 days)
 ## Update config/affy_probeset-ncbigene/config.yaml => output/tsv/affy_probeset-ncbigene.tsv
-< 2023-10-06T17:40:34 affy_probeset-ncbigene
+< 2023-10-13T17:40:28 affy_probeset-ncbigene
 togoid-config config/affy_probeset-ncbigene update
 # Success: output/tsv/affy_probeset-ncbigene.tsv is updated
-> 2023-10-06T17:40:36 affy_probeset-ncbigene
-### Update TSV for assembly_insdc-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/assembly_insdc-bioproject.tsv is newer than config/assembly_insdc-bioproject/config.yaml
-# File output/tsv/assembly_insdc-bioproject.tsv has no timestamp file
-# File output/tsv/assembly_insdc-bioproject.tsv is created 6.998796853485636 days ago (will be updated when >5 days)
+> 2023-10-13T17:40:29 affy_probeset-ncbigene
+### Update TSV for assembly_insdc-bioproject if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/assembly_insdc-bioproject.tsv is older than config/assembly_insdc-bioproject/config.yaml
 ## Update config/assembly_insdc-bioproject/config.yaml => output/tsv/assembly_insdc-bioproject.tsv
-< 2023-10-06T17:40:36 assembly_insdc-bioproject
+< 2023-10-13T17:40:29 assembly_insdc-bioproject
 togoid-config config/assembly_insdc-bioproject update
 # Success: output/tsv/assembly_insdc-bioproject.tsv is updated
-> 2023-10-06T17:40:38 assembly_insdc-bioproject
-### Update TSV for assembly_insdc-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/assembly_insdc-biosample.tsv is newer than config/assembly_insdc-biosample/config.yaml
-# File output/tsv/assembly_insdc-biosample.tsv has no timestamp file
-# File output/tsv/assembly_insdc-biosample.tsv is created 6.998796997722373 days ago (will be updated when >5 days)
+> 2023-10-13T17:40:31 assembly_insdc-bioproject
+### Update TSV for assembly_insdc-biosample if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/assembly_insdc-biosample.tsv is older than config/assembly_insdc-biosample/config.yaml
 ## Update config/assembly_insdc-biosample/config.yaml => output/tsv/assembly_insdc-biosample.tsv
-< 2023-10-06T17:40:38 assembly_insdc-biosample
+< 2023-10-13T17:40:31 assembly_insdc-biosample
 togoid-config config/assembly_insdc-biosample update
 # Success: output/tsv/assembly_insdc-biosample.tsv is updated
-> 2023-10-06T17:40:39 assembly_insdc-biosample
-### Update TSV for assembly_insdc-insdc_master if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/assembly_insdc-insdc_master.tsv is newer than config/assembly_insdc-insdc_master/config.yaml
-# File output/tsv/assembly_insdc-insdc_master.tsv has no timestamp file
-# File output/tsv/assembly_insdc-insdc_master.tsv is created 6.998797619672337 days ago (will be updated when >5 days)
+> 2023-10-13T17:40:33 assembly_insdc-biosample
+### Update TSV for assembly_insdc-insdc_master if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/assembly_insdc-insdc_master.tsv is older than config/assembly_insdc-insdc_master/config.yaml
 ## Update config/assembly_insdc-insdc_master/config.yaml => output/tsv/assembly_insdc-insdc_master.tsv
-< 2023-10-06T17:40:39 assembly_insdc-insdc_master
+< 2023-10-13T17:40:33 assembly_insdc-insdc_master
 togoid-config config/assembly_insdc-insdc_master update
 # Success: output/tsv/assembly_insdc-insdc_master.tsv is updated
-> 2023-10-06T17:40:41 assembly_insdc-insdc_master
-### Update TSV for bioproject-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/bioproject-biosample.tsv is newer than config/bioproject-biosample/config.yaml
-# File output/tsv/bioproject-biosample.tsv is older than input/bioproject/download.lock
+> 2023-10-13T17:40:35 assembly_insdc-insdc_master
+### Update TSV for bioproject-biosample if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/bioproject-biosample.tsv is older than config/bioproject-biosample/config.yaml
 ## Update config/bioproject-biosample/config.yaml => output/tsv/bioproject-biosample.tsv
-< 2023-10-06T17:40:41 bioproject-biosample
+< 2023-10-13T17:40:35 bioproject-biosample
 togoid-config config/bioproject-biosample update
 # Success: output/tsv/bioproject-biosample.tsv is updated
-> 2023-10-06T17:40:43 bioproject-biosample
+> 2023-10-13T17:40:37 bioproject-biosample
 ### Update TSV for bioproject-geo_series if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/bioproject-geo_series.tsv is newer than config/bioproject-geo_series/config.yaml
 # File output/tsv/bioproject-geo_series.tsv is older than input/bioproject/download.lock
 ## Update config/bioproject-geo_series/config.yaml => output/tsv/bioproject-geo_series.tsv
-< 2023-10-06T17:40:43 bioproject-geo_series
+< 2023-10-13T17:40:37 bioproject-geo_series
 togoid-config config/bioproject-geo_series update
 # Success: output/tsv/bioproject-geo_series.tsv is updated
-> 2023-10-06T17:40:45 bioproject-geo_series
+> 2023-10-13T17:40:38 bioproject-geo_series
 ### Update TSV for bioproject-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/bioproject-pubmed.tsv is newer than config/bioproject-pubmed/config.yaml
 # File output/tsv/bioproject-pubmed.tsv is older than input/bioproject/download.lock
 ## Update config/bioproject-pubmed/config.yaml => output/tsv/bioproject-pubmed.tsv
-< 2023-10-06T17:40:45 bioproject-pubmed
+< 2023-10-13T17:40:38 bioproject-pubmed
 togoid-config config/bioproject-pubmed update
 # Success: output/tsv/bioproject-pubmed.tsv is updated
-> 2023-10-06T17:40:46 bioproject-pubmed
-### Update TSV for bioproject_umbrella-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/bioproject_umbrella-bioproject.tsv is newer than config/bioproject_umbrella-bioproject/config.yaml
-# File output/tsv/bioproject_umbrella-bioproject.tsv has no timestamp file
-# File output/tsv/bioproject_umbrella-bioproject.tsv is created 6.998819177176273 days ago (will be updated when >5 days)
+> 2023-10-13T17:40:39 bioproject-pubmed
+### Update TSV for bioproject_umbrella-bioproject if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/bioproject_umbrella-bioproject.tsv is older than config/bioproject_umbrella-bioproject/config.yaml
 ## Update config/bioproject_umbrella-bioproject/config.yaml => output/tsv/bioproject_umbrella-bioproject.tsv
-< 2023-10-06T17:40:46 bioproject_umbrella-bioproject
+< 2023-10-13T17:40:39 bioproject_umbrella-bioproject
 togoid-config config/bioproject_umbrella-bioproject update
 # Success: output/tsv/bioproject_umbrella-bioproject.tsv is updated
-> 2023-10-06T17:40:47 bioproject_umbrella-bioproject
-### Update TSV for biosample-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/biosample-bioproject.tsv is newer than config/biosample-bioproject/config.yaml
-# File output/tsv/biosample-bioproject.tsv has no timestamp file
-# File output/tsv/biosample-bioproject.tsv is created 6.998799244627547 days ago (will be updated when >5 days)
+> 2023-10-13T17:40:40 bioproject_umbrella-bioproject
+### Update TSV for biosample-bioproject if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/biosample-bioproject.tsv is older than config/biosample-bioproject/config.yaml
 ## Update config/biosample-bioproject/config.yaml => output/tsv/biosample-bioproject.tsv
-< 2023-10-06T17:40:47 biosample-bioproject
+< 2023-10-13T17:40:40 biosample-bioproject
 togoid-config config/biosample-bioproject update
 # Success: output/tsv/biosample-bioproject.tsv is updated
-> 2023-10-06T17:40:48 biosample-bioproject
-### Update TSV for cellosaurus-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
+> 2023-10-13T17:40:42 biosample-bioproject
+### Update TSV for cellosaurus-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/cellosaurus-ncit_disease.tsv is newer than config/cellosaurus-ncit_disease/config.yaml
-# File output/tsv/cellosaurus-ncit_disease.tsv is older than input/cellosaurus/download.lock
-## Update config/cellosaurus-ncit_disease/config.yaml => output/tsv/cellosaurus-ncit_disease.tsv
-< 2023-10-06T17:40:49 cellosaurus-ncit_disease
-togoid-config config/cellosaurus-ncit_disease update
-# Success: output/tsv/cellosaurus-ncit_disease.tsv is updated
-> 2023-10-06T17:40:53 cellosaurus-ncit_disease
-### Update TSV for cellosaurus-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
+# File output/tsv/cellosaurus-ncit_disease.tsv is newer than input/cellosaurus/download.lock
+# => Preserving output/tsv/cellosaurus-ncit_disease.tsv
+### Update TSV for cellosaurus-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/cellosaurus-orphanet_phenotype.tsv is newer than config/cellosaurus-orphanet_phenotype/config.yaml
-# File output/tsv/cellosaurus-orphanet_phenotype.tsv is older than input/cellosaurus/download.lock
-## Update config/cellosaurus-orphanet_phenotype/config.yaml => output/tsv/cellosaurus-orphanet_phenotype.tsv
-< 2023-10-06T17:40:53 cellosaurus-orphanet_phenotype
-togoid-config config/cellosaurus-orphanet_phenotype update
-# Success: output/tsv/cellosaurus-orphanet_phenotype.tsv is updated
-> 2023-10-06T17:40:56 cellosaurus-orphanet_phenotype
+# File output/tsv/cellosaurus-orphanet_phenotype.tsv is newer than input/cellosaurus/download.lock
+# => Preserving output/tsv/cellosaurus-orphanet_phenotype.tsv
 ### Update TSV for chebi-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chebi-inchi_key.tsv is newer than config/chebi-inchi_key/config.yaml
 # File output/tsv/chebi-inchi_key.tsv has no timestamp file
-# File output/tsv/chebi-inchi_key.tsv is created 6.998905833651031 days ago (will be updated when >5 days)
+# File output/tsv/chebi-inchi_key.tsv is created 6.999823760687176 days ago (will be updated when >5 days)
 ## Update config/chebi-inchi_key/config.yaml => output/tsv/chebi-inchi_key.tsv
-< 2023-10-06T17:40:56 chebi-inchi_key
+< 2023-10-13T17:40:42 chebi-inchi_key
 togoid-config config/chebi-inchi_key update
 # Success: output/tsv/chebi-inchi_key.tsv is updated
-> 2023-10-06T17:40:57 chebi-inchi_key
+> 2023-10-13T17:40:43 chebi-inchi_key
 ### Update TSV for chembl_compound-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-chebi.tsv is newer than config/chembl_compound-chebi/config.yaml
 # File output/tsv/chembl_compound-chebi.tsv has no timestamp file
-# File output/tsv/chembl_compound-chebi.tsv is created 6.998908053043715 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-chebi.tsv is created 6.999826917550232 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-chebi/config.yaml => output/tsv/chembl_compound-chebi.tsv
-< 2023-10-06T17:40:57 chembl_compound-chebi
+< 2023-10-13T17:40:43 chembl_compound-chebi
 togoid-config config/chembl_compound-chebi update
 # Success: output/tsv/chembl_compound-chebi.tsv is updated
-> 2023-10-06T17:40:57 chembl_compound-chebi
+> 2023-10-13T17:40:43 chembl_compound-chebi
 ### Update TSV for chembl_compound-chembl_target if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-chembl_target.tsv is newer than config/chembl_compound-chembl_target/config.yaml
 # File output/tsv/chembl_compound-chembl_target.tsv has no timestamp file
-# File output/tsv/chembl_compound-chembl_target.tsv is created 6.987849681492534 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-chembl_target.tsv is created 6.9889410600091315 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-chembl_target/config.yaml => output/tsv/chembl_compound-chembl_target.tsv
-< 2023-10-06T17:40:57 chembl_compound-chembl_target
+< 2023-10-13T17:40:43 chembl_compound-chembl_target
 togoid-config config/chembl_compound-chembl_target update
 # Success: output/tsv/chembl_compound-chembl_target.tsv is updated
-> 2023-10-06T17:56:39 chembl_compound-chembl_target
+> 2023-10-13T17:56:53 chembl_compound-chembl_target
 ### Update TSV for chembl_compound-drugbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-drugbank.tsv is newer than config/chembl_compound-drugbank/config.yaml
 # File output/tsv/chembl_compound-drugbank.tsv has no timestamp file
-# File output/tsv/chembl_compound-drugbank.tsv is created 6.998736274069561 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-drugbank.tsv is created 7.000161619241783 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-drugbank/config.yaml => output/tsv/chembl_compound-drugbank.tsv
-< 2023-10-06T17:56:39 chembl_compound-drugbank
+< 2023-10-13T17:56:53 chembl_compound-drugbank
 togoid-config config/chembl_compound-drugbank update
 # Success: output/tsv/chembl_compound-drugbank.tsv is updated
-> 2023-10-06T17:56:39 chembl_compound-drugbank
+> 2023-10-13T17:56:53 chembl_compound-drugbank
 ### Update TSV for chembl_compound-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-hmdb.tsv is newer than config/chembl_compound-hmdb/config.yaml
 # File output/tsv/chembl_compound-hmdb.tsv has no timestamp file
-# File output/tsv/chembl_compound-hmdb.tsv is created 6.998736410349561 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-hmdb.tsv is created 7.000162064386621 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-hmdb/config.yaml => output/tsv/chembl_compound-hmdb.tsv
-< 2023-10-06T17:56:39 chembl_compound-hmdb
+< 2023-10-13T17:56:53 chembl_compound-hmdb
 togoid-config config/chembl_compound-hmdb update
 # Success: output/tsv/chembl_compound-hmdb.tsv is updated
-> 2023-10-06T17:56:39 chembl_compound-hmdb
+> 2023-10-13T17:56:54 chembl_compound-hmdb
 ### Update TSV for chembl_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-inchi_key.tsv is newer than config/chembl_compound-inchi_key/config.yaml
 # File output/tsv/chembl_compound-inchi_key.tsv has no timestamp file
-# File output/tsv/chembl_compound-inchi_key.tsv is created 6.998695573359445 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-inchi_key.tsv is created 7.000121164418577 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-inchi_key/config.yaml => output/tsv/chembl_compound-inchi_key.tsv
-< 2023-10-06T17:56:39 chembl_compound-inchi_key
+< 2023-10-13T17:56:54 chembl_compound-inchi_key
 togoid-config config/chembl_compound-inchi_key update
 # Success: output/tsv/chembl_compound-inchi_key.tsv is updated
-> 2023-10-06T17:56:43 chembl_compound-inchi_key
+> 2023-10-13T17:56:59 chembl_compound-inchi_key
 ### Update TSV for chembl_compound-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-mesh.tsv is newer than config/chembl_compound-mesh/config.yaml
 # File output/tsv/chembl_compound-mesh.tsv has no timestamp file
-# File output/tsv/chembl_compound-mesh.tsv is created 6.998736171755439 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-mesh.tsv is created 7.000171002074375 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-mesh/config.yaml => output/tsv/chembl_compound-mesh.tsv
-< 2023-10-06T17:56:43 chembl_compound-mesh
+< 2023-10-13T17:56:59 chembl_compound-mesh
 togoid-config config/chembl_compound-mesh update
 # Success: output/tsv/chembl_compound-mesh.tsv is updated
-> 2023-10-06T17:56:44 chembl_compound-mesh
+> 2023-10-13T17:56:59 chembl_compound-mesh
 ### Update TSV for chembl_compound-pdb_ccd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-pdb_ccd.tsv is newer than config/chembl_compound-pdb_ccd/config.yaml
 # File output/tsv/chembl_compound-pdb_ccd.tsv has no timestamp file
-# File output/tsv/chembl_compound-pdb_ccd.tsv is created 6.9987331218496065 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-pdb_ccd.tsv is created 7.000173706945498 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-pdb_ccd/config.yaml => output/tsv/chembl_compound-pdb_ccd.tsv
-< 2023-10-06T17:56:44 chembl_compound-pdb_ccd
+< 2023-10-13T17:56:59 chembl_compound-pdb_ccd
 togoid-config config/chembl_compound-pdb_ccd update
 # Success: output/tsv/chembl_compound-pdb_ccd.tsv is updated
-> 2023-10-06T17:56:44 chembl_compound-pdb_ccd
+> 2023-10-13T17:57:00 chembl_compound-pdb_ccd
 ### Update TSV for chembl_compound-pubchem_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-pubchem_compound.tsv is newer than config/chembl_compound-pubchem_compound/config.yaml
 # File output/tsv/chembl_compound-pubchem_compound.tsv has no timestamp file
-# File output/tsv/chembl_compound-pubchem_compound.tsv is created 6.998691199870798 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-pubchem_compound.tsv is created 7.000135775799953 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-pubchem_compound/config.yaml => output/tsv/chembl_compound-pubchem_compound.tsv
-< 2023-10-06T17:56:44 chembl_compound-pubchem_compound
+< 2023-10-13T17:57:00 chembl_compound-pubchem_compound
 togoid-config config/chembl_compound-pubchem_compound update
 # Success: output/tsv/chembl_compound-pubchem_compound.tsv is updated
-> 2023-10-06T17:56:48 chembl_compound-pubchem_compound
+> 2023-10-13T17:57:04 chembl_compound-pubchem_compound
 ### Update TSV for chembl_compound-pubchem_substance if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-pubchem_substance.tsv is newer than config/chembl_compound-pubchem_substance/config.yaml
 # File output/tsv/chembl_compound-pubchem_substance.tsv has no timestamp file
-# File output/tsv/chembl_compound-pubchem_substance.tsv is created 6.99872079890507 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-pubchem_substance.tsv is created 7.000173565187292 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-pubchem_substance/config.yaml => output/tsv/chembl_compound-pubchem_substance.tsv
-< 2023-10-06T17:56:48 chembl_compound-pubchem_substance
+< 2023-10-13T17:57:04 chembl_compound-pubchem_substance
 togoid-config config/chembl_compound-pubchem_substance update
 # Success: output/tsv/chembl_compound-pubchem_substance.tsv is updated
-> 2023-10-06T17:56:49 chembl_compound-pubchem_substance
+> 2023-10-13T17:57:05 chembl_compound-pubchem_substance
 ### Update TSV for chembl_compound-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_compound-pubmed.tsv is newer than config/chembl_compound-pubmed/config.yaml
 # File output/tsv/chembl_compound-pubmed.tsv has no timestamp file
-# File output/tsv/chembl_compound-pubmed.tsv is created 6.998681053364421 days ago (will be updated when >5 days)
+# File output/tsv/chembl_compound-pubmed.tsv is created 7.000155628811679 days ago (will be updated when >5 days)
 ## Update config/chembl_compound-pubmed/config.yaml => output/tsv/chembl_compound-pubmed.tsv
-< 2023-10-06T17:56:49 chembl_compound-pubmed
+< 2023-10-13T17:57:05 chembl_compound-pubmed
 togoid-config config/chembl_compound-pubmed update
 # Success: output/tsv/chembl_compound-pubmed.tsv is updated
-> 2023-10-06T17:56:52 chembl_compound-pubmed
+> 2023-10-13T17:57:08 chembl_compound-pubmed
 ### Update TSV for chembl_target-ensembl_gene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
 # File output/tsv/chembl_target-ensembl_gene.tsv is older than config/chembl_target-ensembl_gene/config.yaml
 ## Update config/chembl_target-ensembl_gene/config.yaml => output/tsv/chembl_target-ensembl_gene.tsv
-< 2023-10-06T17:56:52 chembl_target-ensembl_gene
+< 2023-10-13T17:57:08 chembl_target-ensembl_gene
 togoid-config config/chembl_target-ensembl_gene update
 # Error: output/tsv/chembl_target-ensembl_gene.tsv new file size per old 0 / 61845 = 0.0 < 0.5
 # Error: Failed to create output/tsv/chembl_target-ensembl_gene.tsv or created file was empty
 # Failure: output/tsv/chembl_target-ensembl_gene.tsv is not updated
-> 2023-10-06T17:56:52 chembl_target-ensembl_gene
+> 2023-10-13T17:57:09 chembl_target-ensembl_gene
 ### Update TSV for chembl_target-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_target-go.tsv is newer than config/chembl_target-go/config.yaml
 # File output/tsv/chembl_target-go.tsv has no timestamp file
-# File output/tsv/chembl_target-go.tsv is created 6.998709212904895 days ago (will be updated when >5 days)
+# File output/tsv/chembl_target-go.tsv is created 7.000184462604803 days ago (will be updated when >5 days)
 ## Update config/chembl_target-go/config.yaml => output/tsv/chembl_target-go.tsv
-< 2023-10-06T17:56:52 chembl_target-go
+< 2023-10-13T17:57:09 chembl_target-go
 togoid-config config/chembl_target-go update
 # Success: output/tsv/chembl_target-go.tsv is updated
-> 2023-10-06T17:56:53 chembl_target-go
+> 2023-10-13T17:57:09 chembl_target-go
 ### Update TSV for chembl_target-interpro if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_target-interpro.tsv is newer than config/chembl_target-interpro/config.yaml
 # File output/tsv/chembl_target-interpro.tsv has no timestamp file
-# File output/tsv/chembl_target-interpro.tsv is created 6.99871040744147 days ago (will be updated when >5 days)
+# File output/tsv/chembl_target-interpro.tsv is created 7.000184763722975 days ago (will be updated when >5 days)
 ## Update config/chembl_target-interpro/config.yaml => output/tsv/chembl_target-interpro.tsv
-< 2023-10-06T17:56:53 chembl_target-interpro
+< 2023-10-13T17:57:09 chembl_target-interpro
 togoid-config config/chembl_target-interpro update
 # Success: output/tsv/chembl_target-interpro.tsv is updated
-> 2023-10-06T17:56:53 chembl_target-interpro
+> 2023-10-13T17:57:10 chembl_target-interpro
 ### Update TSV for chembl_target-pdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_target-pdb.tsv is newer than config/chembl_target-pdb/config.yaml
 # File output/tsv/chembl_target-pdb.tsv has no timestamp file
-# File output/tsv/chembl_target-pdb.tsv is created 6.9987094585911915 days ago (will be updated when >5 days)
+# File output/tsv/chembl_target-pdb.tsv is created 7.000183345802245 days ago (will be updated when >5 days)
 ## Update config/chembl_target-pdb/config.yaml => output/tsv/chembl_target-pdb.tsv
-< 2023-10-06T17:56:53 chembl_target-pdb
+< 2023-10-13T17:57:10 chembl_target-pdb
 togoid-config config/chembl_target-pdb update
 # Success: output/tsv/chembl_target-pdb.tsv is updated
-> 2023-10-06T17:56:54 chembl_target-pdb
+> 2023-10-13T17:57:10 chembl_target-pdb
 ### Update TSV for chembl_target-pfam if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_target-pfam.tsv is newer than config/chembl_target-pfam/config.yaml
 # File output/tsv/chembl_target-pfam.tsv has no timestamp file
-# File output/tsv/chembl_target-pfam.tsv is created 6.998710682205348 days ago (will be updated when >5 days)
+# File output/tsv/chembl_target-pfam.tsv is created 7.0001839238916785 days ago (will be updated when >5 days)
 ## Update config/chembl_target-pfam/config.yaml => output/tsv/chembl_target-pfam.tsv
-< 2023-10-06T17:56:54 chembl_target-pfam
+< 2023-10-13T17:57:10 chembl_target-pfam
 togoid-config config/chembl_target-pfam update
 # Success: output/tsv/chembl_target-pfam.tsv is updated
-> 2023-10-06T17:56:54 chembl_target-pfam
+> 2023-10-13T17:57:10 chembl_target-pfam
 ### Update TSV for chembl_target-reactome_pathway if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_target-reactome_pathway.tsv is newer than config/chembl_target-reactome_pathway/config.yaml
 # File output/tsv/chembl_target-reactome_pathway.tsv has no timestamp file
-# File output/tsv/chembl_target-reactome_pathway.tsv is created 6.998710757536215 days ago (will be updated when >5 days)
+# File output/tsv/chembl_target-reactome_pathway.tsv is created 7.000184114683948 days ago (will be updated when >5 days)
 ## Update config/chembl_target-reactome_pathway/config.yaml => output/tsv/chembl_target-reactome_pathway.tsv
-< 2023-10-06T17:56:54 chembl_target-reactome_pathway
+< 2023-10-13T17:57:10 chembl_target-reactome_pathway
 togoid-config config/chembl_target-reactome_pathway update
 # Success: output/tsv/chembl_target-reactome_pathway.tsv is updated
-> 2023-10-06T17:56:55 chembl_target-reactome_pathway
+> 2023-10-13T17:57:11 chembl_target-reactome_pathway
 ### Update TSV for chembl_target-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/chembl_target-uniprot.tsv is newer than config/chembl_target-uniprot/config.yaml
 # File output/tsv/chembl_target-uniprot.tsv has no timestamp file
-# File output/tsv/chembl_target-uniprot.tsv is created 6.99862147891383 days ago (will be updated when >5 days)
+# File output/tsv/chembl_target-uniprot.tsv is created 7.000095118739792 days ago (will be updated when >5 days)
 ## Update config/chembl_target-uniprot/config.yaml => output/tsv/chembl_target-uniprot.tsv
-< 2023-10-06T17:56:55 chembl_target-uniprot
+< 2023-10-13T17:57:11 chembl_target-uniprot
 togoid-config config/chembl_target-uniprot update
 # Success: output/tsv/chembl_target-uniprot.tsv is updated
-> 2023-10-06T17:57:03 chembl_target-uniprot
-### Update TSV for clinvar-medgen if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/clinvar-medgen.tsv is newer than config/clinvar-medgen/config.yaml
-# File output/tsv/clinvar-medgen.tsv has no timestamp file
-# File output/tsv/clinvar-medgen.tsv is created 6.99870206980625 days ago (will be updated when >5 days)
+> 2023-10-13T17:57:20 chembl_target-uniprot
+### Update TSV for clinvar-medgen if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/clinvar-medgen.tsv is older than config/clinvar-medgen/config.yaml
 ## Update config/clinvar-medgen/config.yaml => output/tsv/clinvar-medgen.tsv
-< 2023-10-06T17:57:03 clinvar-medgen
+< 2023-10-13T17:57:20 clinvar-medgen
 togoid-config config/clinvar-medgen update
 # Success: output/tsv/clinvar-medgen.tsv is updated
-> 2023-10-06T17:57:04 clinvar-medgen
+> 2023-10-13T17:57:21 clinvar-medgen
 ### Update TSV for cog-insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/cog-insdc.tsv is newer than config/cog-insdc/config.yaml
 # File output/tsv/cog-insdc.tsv is newer than input/cog/download.lock
@@ -487,300 +477,322 @@ togoid-config config/clinvar-medgen update
 ### Update TSV for doid-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/doid-mesh.tsv is newer than config/doid-mesh/config.yaml
 # File output/tsv/doid-mesh.tsv has no timestamp file
-# File output/tsv/doid-mesh.tsv is created 6.998711901631575 days ago (will be updated when >5 days)
+# File output/tsv/doid-mesh.tsv is created 7.000191552103831 days ago (will be updated when >5 days)
 ## Update config/doid-mesh/config.yaml => output/tsv/doid-mesh.tsv
-< 2023-10-06T17:57:04 doid-mesh
+< 2023-10-13T17:57:21 doid-mesh
 togoid-config config/doid-mesh update
 # Success: output/tsv/doid-mesh.tsv is updated
-> 2023-10-06T17:57:04 doid-mesh
+> 2023-10-13T17:57:21 doid-mesh
 ### Update TSV for doid-ncit_disease if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/doid-ncit_disease.tsv is newer than config/doid-ncit_disease/config.yaml
 # File output/tsv/doid-ncit_disease.tsv has no timestamp file
-# File output/tsv/doid-ncit_disease.tsv is created 6.998711100744086 days ago (will be updated when >5 days)
+# File output/tsv/doid-ncit_disease.tsv is created 7.000192010085405 days ago (will be updated when >5 days)
 ## Update config/doid-ncit_disease/config.yaml => output/tsv/doid-ncit_disease.tsv
-< 2023-10-06T17:57:04 doid-ncit_disease
+< 2023-10-13T17:57:21 doid-ncit_disease
 togoid-config config/doid-ncit_disease update
 # Success: output/tsv/doid-ncit_disease.tsv is updated
-> 2023-10-06T17:57:05 doid-ncit_disease
+> 2023-10-13T17:57:22 doid-ncit_disease
 ### Update TSV for doid-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/doid-omim_phenotype.tsv is newer than config/doid-omim_phenotype/config.yaml
 # File output/tsv/doid-omim_phenotype.tsv has no timestamp file
-# File output/tsv/doid-omim_phenotype.tsv is created 6.9987104217048035 days ago (will be updated when >5 days)
+# File output/tsv/doid-omim_phenotype.tsv is created 7.00019155863964 days ago (will be updated when >5 days)
 ## Update config/doid-omim_phenotype/config.yaml => output/tsv/doid-omim_phenotype.tsv
-< 2023-10-06T17:57:05 doid-omim_phenotype
+< 2023-10-13T17:57:22 doid-omim_phenotype
 togoid-config config/doid-omim_phenotype update
 # Success: output/tsv/doid-omim_phenotype.tsv is updated
-> 2023-10-06T17:57:05 doid-omim_phenotype
+> 2023-10-13T17:57:22 doid-omim_phenotype
 ### Update TSV for ensembl_gene-affy_probeset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_gene-affy_probeset.tsv is newer than config/ensembl_gene-affy_probeset/config.yaml
 # File output/tsv/ensembl_gene-affy_probeset.tsv has no timestamp file
-# File output/tsv/ensembl_gene-affy_probeset.tsv is created 6.998149299109178 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_gene-affy_probeset.tsv is created 6.999680063640428 days ago (will be updated when >5 days)
 ## Update config/ensembl_gene-affy_probeset/config.yaml => output/tsv/ensembl_gene-affy_probeset.tsv
-< 2023-10-06T17:57:05 ensembl_gene-affy_probeset
+< 2023-10-13T17:57:22 ensembl_gene-affy_probeset
 togoid-config config/ensembl_gene-affy_probeset update
 # Success: output/tsv/ensembl_gene-affy_probeset.tsv is updated
-> 2023-10-06T17:57:50 ensembl_gene-affy_probeset
+> 2023-10-13T17:58:04 ensembl_gene-affy_probeset
 ### Update TSV for ensembl_gene-ensembl_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_gene-ensembl_protein.tsv is newer than config/ensembl_gene-ensembl_protein/config.yaml
 # File output/tsv/ensembl_gene-ensembl_protein.tsv has no timestamp file
-# File output/tsv/ensembl_gene-ensembl_protein.tsv is created 6.997416028886481 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_gene-ensembl_protein.tsv is created 6.998880384189051 days ago (will be updated when >5 days)
 ## Update config/ensembl_gene-ensembl_protein/config.yaml => output/tsv/ensembl_gene-ensembl_protein.tsv
-< 2023-10-06T17:57:50 ensembl_gene-ensembl_protein
+< 2023-10-13T17:58:04 ensembl_gene-ensembl_protein
 togoid-config config/ensembl_gene-ensembl_protein update
 # Success: output/tsv/ensembl_gene-ensembl_protein.tsv is updated
-> 2023-10-06T17:59:41 ensembl_gene-ensembl_protein
+> 2023-10-13T18:00:02 ensembl_gene-ensembl_protein
 ### Update TSV for ensembl_gene-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_gene-ensembl_transcript.tsv is newer than config/ensembl_gene-ensembl_transcript/config.yaml
 # File output/tsv/ensembl_gene-ensembl_transcript.tsv has no timestamp file
-# File output/tsv/ensembl_gene-ensembl_transcript.tsv is created 6.99729779128787 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_gene-ensembl_transcript.tsv is created 6.9988727182891095 days ago (will be updated when >5 days)
 ## Update config/ensembl_gene-ensembl_transcript/config.yaml => output/tsv/ensembl_gene-ensembl_transcript.tsv
-< 2023-10-06T17:59:41 ensembl_gene-ensembl_transcript
+< 2023-10-13T18:00:02 ensembl_gene-ensembl_transcript
 togoid-config config/ensembl_gene-ensembl_transcript update
 # Success: output/tsv/ensembl_gene-ensembl_transcript.tsv is updated
-> 2023-10-06T18:01:40 ensembl_gene-ensembl_transcript
+> 2023-10-13T18:02:06 ensembl_gene-ensembl_transcript
 ### Update TSV for ensembl_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_gene-hgnc.tsv is newer than config/ensembl_gene-hgnc/config.yaml
 # File output/tsv/ensembl_gene-hgnc.tsv has no timestamp file
-# File output/tsv/ensembl_gene-hgnc.tsv is created 6.9986708505416555 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_gene-hgnc.tsv is created 7.00030459255279 days ago (will be updated when >5 days)
 ## Update config/ensembl_gene-hgnc/config.yaml => output/tsv/ensembl_gene-hgnc.tsv
-< 2023-10-06T18:01:40 ensembl_gene-hgnc
+< 2023-10-13T18:02:06 ensembl_gene-hgnc
 togoid-config config/ensembl_gene-hgnc update
 # Success: output/tsv/ensembl_gene-hgnc.tsv is updated
-> 2023-10-06T18:01:40 ensembl_gene-hgnc
+> 2023-10-13T18:02:07 ensembl_gene-hgnc
 ### Update TSV for ensembl_gene-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_gene-ncbigene.tsv is newer than config/ensembl_gene-ncbigene/config.yaml
 # File output/tsv/ensembl_gene-ncbigene.tsv has no timestamp file
-# File output/tsv/ensembl_gene-ncbigene.tsv is created 6.9976941776806365 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_gene-ncbigene.tsv is created 6.999285807135023 days ago (will be updated when >5 days)
 ## Update config/ensembl_gene-ncbigene/config.yaml => output/tsv/ensembl_gene-ncbigene.tsv
-< 2023-10-06T18:01:40 ensembl_gene-ncbigene
+< 2023-10-13T18:02:07 ensembl_gene-ncbigene
 togoid-config config/ensembl_gene-ncbigene update
 # Success: output/tsv/ensembl_gene-ncbigene.tsv is updated
-> 2023-10-06T18:03:09 ensembl_gene-ncbigene
+> 2023-10-13T18:03:42 ensembl_gene-ncbigene
 ### Update TSV for ensembl_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_gene-uniprot.tsv is newer than config/ensembl_gene-uniprot/config.yaml
 # File output/tsv/ensembl_gene-uniprot.tsv has no timestamp file
-# File output/tsv/ensembl_gene-uniprot.tsv is created 6.997749335047373 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_gene-uniprot.tsv is created 6.9994567117175235 days ago (will be updated when >5 days)
 ## Update config/ensembl_gene-uniprot/config.yaml => output/tsv/ensembl_gene-uniprot.tsv
-< 2023-10-06T18:03:09 ensembl_gene-uniprot
+< 2023-10-13T18:03:42 ensembl_gene-uniprot
 togoid-config config/ensembl_gene-uniprot update
 # Success: output/tsv/ensembl_gene-uniprot.tsv is updated
-> 2023-10-06T18:04:29 ensembl_gene-uniprot
+> 2023-10-13T18:05:10 ensembl_gene-uniprot
 ### Update TSV for ensembl_protein-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_protein-ensembl_transcript.tsv is newer than config/ensembl_protein-ensembl_transcript/config.yaml
 # File output/tsv/ensembl_protein-ensembl_transcript.tsv has no timestamp file
-# File output/tsv/ensembl_protein-ensembl_transcript.tsv is created 6.997409491139468 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_protein-ensembl_transcript.tsv is created 6.999169692754294 days ago (will be updated when >5 days)
 ## Update config/ensembl_protein-ensembl_transcript/config.yaml => output/tsv/ensembl_protein-ensembl_transcript.tsv
-< 2023-10-06T18:04:29 ensembl_protein-ensembl_transcript
+< 2023-10-13T18:05:10 ensembl_protein-ensembl_transcript
 togoid-config config/ensembl_protein-ensembl_transcript update
 # Success: output/tsv/ensembl_protein-ensembl_transcript.tsv is updated
-> 2023-10-06T18:06:21 ensembl_protein-ensembl_transcript
+> 2023-10-13T18:07:09 ensembl_protein-ensembl_transcript
 ### Update TSV for ensembl_transcript-affy_probeset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_transcript-affy_probeset.tsv is newer than config/ensembl_transcript-affy_probeset/config.yaml
 # File output/tsv/ensembl_transcript-affy_probeset.tsv has no timestamp file
-# File output/tsv/ensembl_transcript-affy_probeset.tsv is created 6.998066917821771 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_transcript-affy_probeset.tsv is created 6.999931364261042 days ago (will be updated when >5 days)
 ## Update config/ensembl_transcript-affy_probeset/config.yaml => output/tsv/ensembl_transcript-affy_probeset.tsv
-< 2023-10-06T18:06:21 ensembl_transcript-affy_probeset
+< 2023-10-13T18:07:09 ensembl_transcript-affy_probeset
 togoid-config config/ensembl_transcript-affy_probeset update
 # Success: output/tsv/ensembl_transcript-affy_probeset.tsv is updated
-> 2023-10-06T18:07:15 ensembl_transcript-affy_probeset
+> 2023-10-13T18:07:51 ensembl_transcript-affy_probeset
 ### Update TSV for ensembl_transcript-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_transcript-go.tsv is newer than config/ensembl_transcript-go/config.yaml
 # File output/tsv/ensembl_transcript-go.tsv has no timestamp file
-# File output/tsv/ensembl_transcript-go.tsv is created 6.99602502527596 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_transcript-go.tsv is created 6.997659367305694 days ago (will be updated when >5 days)
 ## Update config/ensembl_transcript-go/config.yaml => output/tsv/ensembl_transcript-go.tsv
-< 2023-10-06T18:07:15 ensembl_transcript-go
+< 2023-10-13T18:07:51 ensembl_transcript-go
 togoid-config config/ensembl_transcript-go update
 # Success: output/tsv/ensembl_transcript-go.tsv is updated
-> 2023-10-06T18:11:13 ensembl_transcript-go
+> 2023-10-13T18:11:53 ensembl_transcript-go
 ### Update TSV for ensembl_transcript-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_transcript-hgnc.tsv is newer than config/ensembl_transcript-hgnc/config.yaml
 # File output/tsv/ensembl_transcript-hgnc.tsv has no timestamp file
-# File output/tsv/ensembl_transcript-hgnc.tsv is created 6.998769536338784 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_transcript-hgnc.tsv is created 7.000450221797546 days ago (will be updated when >5 days)
 ## Update config/ensembl_transcript-hgnc/config.yaml => output/tsv/ensembl_transcript-hgnc.tsv
-< 2023-10-06T18:11:13 ensembl_transcript-hgnc
+< 2023-10-13T18:11:53 ensembl_transcript-hgnc
 togoid-config config/ensembl_transcript-hgnc update
 # Success: output/tsv/ensembl_transcript-hgnc.tsv is updated
-> 2023-10-06T18:11:14 ensembl_transcript-hgnc
+> 2023-10-13T18:11:54 ensembl_transcript-hgnc
 ### Update TSV for ensembl_transcript-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ensembl_transcript-refseq_rna.tsv is newer than config/ensembl_transcript-refseq_rna/config.yaml
 # File output/tsv/ensembl_transcript-refseq_rna.tsv has no timestamp file
-# File output/tsv/ensembl_transcript-refseq_rna.tsv is created 6.997703503009004 days ago (will be updated when >5 days)
+# File output/tsv/ensembl_transcript-refseq_rna.tsv is created 6.999366838634421 days ago (will be updated when >5 days)
 ## Update config/ensembl_transcript-refseq_rna/config.yaml => output/tsv/ensembl_transcript-refseq_rna.tsv
-< 2023-10-06T18:11:14 ensembl_transcript-refseq_rna
+< 2023-10-13T18:11:54 ensembl_transcript-refseq_rna
 togoid-config config/ensembl_transcript-refseq_rna update
 # Success: output/tsv/ensembl_transcript-refseq_rna.tsv is updated
-> 2023-10-06T18:12:48 ensembl_transcript-refseq_rna
-### Update TSV for gea-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/gea-bioproject.tsv is newer than config/gea-bioproject/config.yaml
-# File output/tsv/gea-bioproject.tsv has no timestamp file
-# File output/tsv/gea-bioproject.tsv is created 6.9987935140727195 days ago (will be updated when >5 days)
+> 2023-10-13T18:13:37 ensembl_transcript-refseq_rna
+### Update TSV for gea-bioproject if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/gea-bioproject.tsv is older than config/gea-bioproject/config.yaml
 ## Update config/gea-bioproject/config.yaml => output/tsv/gea-bioproject.tsv
-< 2023-10-06T18:12:48 gea-bioproject
+< 2023-10-13T18:13:37 gea-bioproject
 togoid-config config/gea-bioproject update
 # Success: output/tsv/gea-bioproject.tsv is updated
-> 2023-10-06T18:12:49 gea-bioproject
-### Update TSV for gea-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/gea-biosample.tsv is newer than config/gea-biosample/config.yaml
-# File output/tsv/gea-biosample.tsv has no timestamp file
-# File output/tsv/gea-biosample.tsv is created 6.9987931258126155 days ago (will be updated when >5 days)
+> 2023-10-13T18:13:38 gea-bioproject
+### Update TSV for gea-biosample if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/gea-biosample.tsv is older than config/gea-biosample/config.yaml
 ## Update config/gea-biosample/config.yaml => output/tsv/gea-biosample.tsv
-< 2023-10-06T18:12:49 gea-biosample
+< 2023-10-13T18:13:38 gea-biosample
 togoid-config config/gea-biosample update
 # Success: output/tsv/gea-biosample.tsv is updated
-> 2023-10-06T18:12:49 gea-biosample
+> 2023-10-13T18:13:38 gea-biosample
 ### Update TSV for glytoucan-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/glytoucan-doid.tsv is newer than config/glytoucan-doid/config.yaml
 # File output/tsv/glytoucan-doid.tsv has no timestamp file
-# File output/tsv/glytoucan-doid.tsv is created 6.998719099720104 days ago (will be updated when >5 days)
+# File output/tsv/glytoucan-doid.tsv is created 7.00049335567265 days ago (will be updated when >5 days)
 ## Update config/glytoucan-doid/config.yaml => output/tsv/glytoucan-doid.tsv
-< 2023-10-06T18:12:49 glytoucan-doid
+< 2023-10-13T18:13:38 glytoucan-doid
 togoid-config config/glytoucan-doid update
 # Success: output/tsv/glytoucan-doid.tsv is updated
-> 2023-10-06T18:12:56 glytoucan-doid
+> 2023-10-13T18:13:45 glytoucan-doid
 ### Update TSV for glytoucan-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/glytoucan-ncbigene.tsv is newer than config/glytoucan-ncbigene/config.yaml
 # File output/tsv/glytoucan-ncbigene.tsv has no timestamp file
-# File output/tsv/glytoucan-ncbigene.tsv is created 6.998786569800046 days ago (will be updated when >5 days)
+# File output/tsv/glytoucan-ncbigene.tsv is created 7.00056336174331 days ago (will be updated when >5 days)
 ## Update config/glytoucan-ncbigene/config.yaml => output/tsv/glytoucan-ncbigene.tsv
-< 2023-10-06T18:12:56 glytoucan-ncbigene
+< 2023-10-13T18:13:45 glytoucan-ncbigene
 togoid-config config/glytoucan-ncbigene update
 # Success: output/tsv/glytoucan-ncbigene.tsv is updated
-> 2023-10-06T18:12:57 glytoucan-ncbigene
+> 2023-10-13T18:13:46 glytoucan-ncbigene
 ### Update TSV for glytoucan-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/glytoucan-uniprot.tsv is newer than config/glytoucan-uniprot/config.yaml
 # File output/tsv/glytoucan-uniprot.tsv has no timestamp file
-# File output/tsv/glytoucan-uniprot.tsv is created 6.998781123609536 days ago (will be updated when >5 days)
+# File output/tsv/glytoucan-uniprot.tsv is created 7.000557859188646 days ago (will be updated when >5 days)
 ## Update config/glytoucan-uniprot/config.yaml => output/tsv/glytoucan-uniprot.tsv
-< 2023-10-06T18:12:57 glytoucan-uniprot
+< 2023-10-13T18:13:46 glytoucan-uniprot
 togoid-config config/glytoucan-uniprot update
 # Success: output/tsv/glytoucan-uniprot.tsv is updated
-> 2023-10-06T18:12:58 glytoucan-uniprot
+> 2023-10-13T18:13:48 glytoucan-uniprot
 ### Update TSV for hgnc-ccds if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-ccds.tsv is newer than config/hgnc-ccds/config.yaml
 # File output/tsv/hgnc-ccds.tsv has no timestamp file
-# File output/tsv/hgnc-ccds.tsv is created 6.9987771598458455 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-ccds.tsv is created 7.000537053214513 days ago (will be updated when >5 days)
 ## Update config/hgnc-ccds/config.yaml => output/tsv/hgnc-ccds.tsv
-< 2023-10-06T18:12:58 hgnc-ccds
+< 2023-10-13T18:13:48 hgnc-ccds
 togoid-config config/hgnc-ccds update
-# Success: output/tsv/hgnc-ccds.tsv is updated
-> 2023-10-06T18:13:01 hgnc-ccds
+# Error: output/tsv/hgnc-ccds.tsv new file size per old 153 / 505146 = 0.00030288273093323514 < 0.5
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </html>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-ccds.tsv seems to contain HTML </html>
+# Failure: output/tsv/hgnc-ccds.tsv is not updated
+> 2023-10-13T18:14:48 hgnc-ccds
 ### Update TSV for hgnc-ec if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-ec.tsv is newer than config/hgnc-ec/config.yaml
 # File output/tsv/hgnc-ec.tsv has no timestamp file
-# File output/tsv/hgnc-ec.tsv is created 6.998810782481955 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-ec.tsv is created 7.001231798953299 days ago (will be updated when >5 days)
 ## Update config/hgnc-ec/config.yaml => output/tsv/hgnc-ec.tsv
-< 2023-10-06T18:13:01 hgnc-ec
+< 2023-10-13T18:14:48 hgnc-ec
 togoid-config config/hgnc-ec update
 # Success: output/tsv/hgnc-ec.tsv is updated
-> 2023-10-06T18:13:01 hgnc-ec
+> 2023-10-13T18:15:03 hgnc-ec
 ### Update TSV for hgnc-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-ensembl_gene.tsv is newer than config/hgnc-ensembl_gene/config.yaml
 # File output/tsv/hgnc-ensembl_gene.tsv has no timestamp file
-# File output/tsv/hgnc-ensembl_gene.tsv is created 6.998805535421192 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-ensembl_gene.tsv is created 7.001397979427824 days ago (will be updated when >5 days)
 ## Update config/hgnc-ensembl_gene/config.yaml => output/tsv/hgnc-ensembl_gene.tsv
-< 2023-10-06T18:13:01 hgnc-ensembl_gene
+< 2023-10-13T18:15:03 hgnc-ensembl_gene
 togoid-config config/hgnc-ensembl_gene update
 # Success: output/tsv/hgnc-ensembl_gene.tsv is updated
-> 2023-10-06T18:13:02 hgnc-ensembl_gene
+> 2023-10-13T18:15:09 hgnc-ensembl_gene
 ### Update TSV for hgnc-hgnc_symbol if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-hgnc_symbol.tsv is newer than config/hgnc-hgnc_symbol/config.yaml
 # File output/tsv/hgnc-hgnc_symbol.tsv has no timestamp file
-# File output/tsv/hgnc-hgnc_symbol.tsv is created 6.998809827186493 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-hgnc_symbol.tsv is created 7.001457611975961 days ago (will be updated when >5 days)
 ## Update config/hgnc-hgnc_symbol/config.yaml => output/tsv/hgnc-hgnc_symbol.tsv
-< 2023-10-06T18:13:02 hgnc-hgnc_symbol
+< 2023-10-13T18:15:09 hgnc-hgnc_symbol
 togoid-config config/hgnc-hgnc_symbol update
 # Success: output/tsv/hgnc-hgnc_symbol.tsv is updated
-> 2023-10-06T18:13:03 hgnc-hgnc_symbol
+> 2023-10-13T18:15:21 hgnc-hgnc_symbol
 ### Update TSV for hgnc-insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-insdc.tsv is newer than config/hgnc-insdc/config.yaml
 # File output/tsv/hgnc-insdc.tsv has no timestamp file
-# File output/tsv/hgnc-insdc.tsv is created 6.998810306492453 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-insdc.tsv is created 7.001592744121899 days ago (will be updated when >5 days)
 ## Update config/hgnc-insdc/config.yaml => output/tsv/hgnc-insdc.tsv
-< 2023-10-06T18:13:03 hgnc-insdc
+< 2023-10-13T18:15:21 hgnc-insdc
 togoid-config config/hgnc-insdc update
 # Success: output/tsv/hgnc-insdc.tsv is updated
-> 2023-10-06T18:13:04 hgnc-insdc
+> 2023-10-13T18:15:22 hgnc-insdc
 ### Update TSV for hgnc-lrg if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-lrg.tsv is newer than config/hgnc-lrg/config.yaml
 # File output/tsv/hgnc-lrg.tsv has no timestamp file
-# File output/tsv/hgnc-lrg.tsv is created 6.998813767274248 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-lrg.tsv is created 7.001596134559051 days ago (will be updated when >5 days)
 ## Update config/hgnc-lrg/config.yaml => output/tsv/hgnc-lrg.tsv
-< 2023-10-06T18:13:04 hgnc-lrg
+< 2023-10-13T18:15:22 hgnc-lrg
 togoid-config config/hgnc-lrg update
 # Success: output/tsv/hgnc-lrg.tsv is updated
-> 2023-10-06T18:13:04 hgnc-lrg
+> 2023-10-13T18:15:23 hgnc-lrg
 ### Update TSV for hgnc-mgi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-mgi.tsv is newer than config/hgnc-mgi/config.yaml
 # File output/tsv/hgnc-mgi.tsv has no timestamp file
-# File output/tsv/hgnc-mgi.tsv is created 6.9988098945309725 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-mgi.tsv is created 7.001602913748785 days ago (will be updated when >5 days)
 ## Update config/hgnc-mgi/config.yaml => output/tsv/hgnc-mgi.tsv
-< 2023-10-06T18:13:04 hgnc-mgi
+< 2023-10-13T18:15:23 hgnc-mgi
 togoid-config config/hgnc-mgi update
 # Success: output/tsv/hgnc-mgi.tsv is updated
-> 2023-10-06T18:13:04 hgnc-mgi
+> 2023-10-13T18:15:24 hgnc-mgi
 ### Update TSV for hgnc-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-mirbase.tsv is newer than config/hgnc-mirbase/config.yaml
 # File output/tsv/hgnc-mirbase.tsv has no timestamp file
-# File output/tsv/hgnc-mirbase.tsv is created 6.998813318081909 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-mirbase.tsv is created 7.001606728870649 days ago (will be updated when >5 days)
 ## Update config/hgnc-mirbase/config.yaml => output/tsv/hgnc-mirbase.tsv
-< 2023-10-06T18:13:04 hgnc-mirbase
+< 2023-10-13T18:15:24 hgnc-mirbase
 togoid-config config/hgnc-mirbase update
 # Success: output/tsv/hgnc-mirbase.tsv is updated
-> 2023-10-06T18:13:05 hgnc-mirbase
+> 2023-10-13T18:15:24 hgnc-mirbase
 ### Update TSV for hgnc-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-ncbigene.tsv is newer than config/hgnc-ncbigene/config.yaml
 # File output/tsv/hgnc-ncbigene.tsv has no timestamp file
-# File output/tsv/hgnc-ncbigene.tsv is created 6.998808224682014 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-ncbigene.tsv is created 7.001603532046829 days ago (will be updated when >5 days)
 ## Update config/hgnc-ncbigene/config.yaml => output/tsv/hgnc-ncbigene.tsv
-< 2023-10-06T18:13:05 hgnc-ncbigene
+< 2023-10-13T18:15:24 hgnc-ncbigene
 togoid-config config/hgnc-ncbigene update
 # Success: output/tsv/hgnc-ncbigene.tsv is updated
-> 2023-10-06T18:13:06 hgnc-ncbigene
+> 2023-10-13T18:15:31 hgnc-ncbigene
 ### Update TSV for hgnc-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-omim_gene.tsv is newer than config/hgnc-omim_gene/config.yaml
 # File output/tsv/hgnc-omim_gene.tsv has no timestamp file
-# File output/tsv/hgnc-omim_gene.tsv is created 6.998811412316505 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-omim_gene.tsv is created 7.00168172047199 days ago (will be updated when >5 days)
 ## Update config/hgnc-omim_gene/config.yaml => output/tsv/hgnc-omim_gene.tsv
-< 2023-10-06T18:13:06 hgnc-omim_gene
+< 2023-10-13T18:15:31 hgnc-omim_gene
 togoid-config config/hgnc-omim_gene update
 # Success: output/tsv/hgnc-omim_gene.tsv is updated
-> 2023-10-06T18:13:06 hgnc-omim_gene
+> 2023-10-13T18:15:32 hgnc-omim_gene
 ### Update TSV for hgnc-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-pubmed.tsv is newer than config/hgnc-pubmed/config.yaml
 # File output/tsv/hgnc-pubmed.tsv has no timestamp file
-# File output/tsv/hgnc-pubmed.tsv is created 6.998809658445591 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-pubmed.tsv is created 7.001685397172083 days ago (will be updated when >5 days)
 ## Update config/hgnc-pubmed/config.yaml => output/tsv/hgnc-pubmed.tsv
-< 2023-10-06T18:13:06 hgnc-pubmed
+< 2023-10-13T18:15:32 hgnc-pubmed
 togoid-config config/hgnc-pubmed update
-# Success: output/tsv/hgnc-pubmed.tsv is updated
-> 2023-10-06T18:13:07 hgnc-pubmed
+# Error: output/tsv/hgnc-pubmed.tsv new file size per old 153 / 467695 = 0.00032713627470894494 < 0.5
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </html>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <head><title>504 Gateway Time-out</title></head>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <center><h1>504 Gateway Time-out</h1></center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML <hr><center>nginx/1.16.0</center>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </body>
+# Error: output/tsv/hgnc-pubmed.tsv seems to contain HTML </html>
+# Failure: output/tsv/hgnc-pubmed.tsv is not updated
+> 2023-10-13T18:16:32 hgnc-pubmed
 ### Update TSV for hgnc-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-refseq_rna.tsv is newer than config/hgnc-refseq_rna/config.yaml
 # File output/tsv/hgnc-refseq_rna.tsv has no timestamp file
-# File output/tsv/hgnc-refseq_rna.tsv is created 6.998803346062974 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-refseq_rna.tsv is created 7.002368682409421 days ago (will be updated when >5 days)
 ## Update config/hgnc-refseq_rna/config.yaml => output/tsv/hgnc-refseq_rna.tsv
-< 2023-10-06T18:13:07 hgnc-refseq_rna
+< 2023-10-13T18:16:32 hgnc-refseq_rna
 togoid-config config/hgnc-refseq_rna update
 # Success: output/tsv/hgnc-refseq_rna.tsv is updated
-> 2023-10-06T18:13:08 hgnc-refseq_rna
+> 2023-10-13T18:16:35 hgnc-refseq_rna
 ### Update TSV for hgnc-rgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-rgd.tsv is newer than config/hgnc-rgd/config.yaml
 # File output/tsv/hgnc-rgd.tsv has no timestamp file
-# File output/tsv/hgnc-rgd.tsv is created 6.998811898853044 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-rgd.tsv is created 7.002387057582731 days ago (will be updated when >5 days)
 ## Update config/hgnc-rgd/config.yaml => output/tsv/hgnc-rgd.tsv
-< 2023-10-06T18:13:08 hgnc-rgd
+< 2023-10-13T18:16:35 hgnc-rgd
 togoid-config config/hgnc-rgd update
 # Success: output/tsv/hgnc-rgd.tsv is updated
-> 2023-10-06T18:13:08 hgnc-rgd
+> 2023-10-13T18:16:35 hgnc-rgd
 ### Update TSV for hgnc-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hgnc-uniprot.tsv is newer than config/hgnc-uniprot/config.yaml
 # File output/tsv/hgnc-uniprot.tsv has no timestamp file
-# File output/tsv/hgnc-uniprot.tsv is created 6.998811734810995 days ago (will be updated when >5 days)
+# File output/tsv/hgnc-uniprot.tsv is created 7.002386036815996 days ago (will be updated when >5 days)
 ## Update config/hgnc-uniprot/config.yaml => output/tsv/hgnc-uniprot.tsv
-< 2023-10-06T18:13:08 hgnc-uniprot
+< 2023-10-13T18:16:35 hgnc-uniprot
 togoid-config config/hgnc-uniprot update
 # Success: output/tsv/hgnc-uniprot.tsv is updated
-> 2023-10-06T18:13:09 hgnc-uniprot
+> 2023-10-13T18:16:36 hgnc-uniprot
 ### Update TSV for hmdb-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/hmdb-chebi.tsv is newer than config/hmdb-chebi/config.yaml
 # File output/tsv/hmdb-chebi.tsv is newer than input/hmdb/download.lock
@@ -804,9 +816,9 @@ togoid-config config/hgnc-uniprot update
 ### Update TSV for hp_inheritance-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hp_inheritance-omim_phenotype.tsv is newer than config/hp_inheritance-omim_phenotype/config.yaml
 # File output/tsv/hp_inheritance-omim_phenotype.tsv has no timestamp file
-# File output/tsv/hp_inheritance-omim_phenotype.tsv is created 6.998812493838831 days ago (will be updated when >5 days)
+# File output/tsv/hp_inheritance-omim_phenotype.tsv is created 14.001204635765683 days ago (will be updated when >5 days)
 ## Update config/hp_inheritance-omim_phenotype/config.yaml => output/tsv/hp_inheritance-omim_phenotype.tsv
-< 2023-10-06T18:13:09 hp_inheritance-omim_phenotype
+< 2023-10-13T18:16:36 hp_inheritance-omim_phenotype
 togoid-config config/hp_inheritance-omim_phenotype update
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv new file size per old 201 / 129540 = 0.0015516442797591477 < 0.5
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML <html><head>
@@ -822,55 +834,72 @@ togoid-config config/hp_inheritance-omim_phenotype update
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML <p>The document has moved <a href=https://biosciencedbc.jp/news/20231002-01.html>here</a>.</p>
 # Error: output/tsv/hp_inheritance-omim_phenotype.tsv seems to contain HTML </body></html>
 # Failure: output/tsv/hp_inheritance-omim_phenotype.tsv is not updated
-> 2023-10-06T18:13:09 hp_inheritance-omim_phenotype
-### Update TSV for hp_phenotype-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
+> 2023-10-13T18:16:36 hp_inheritance-omim_phenotype
+### Update TSV for hp_phenotype-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hp_phenotype-ncbigene.tsv is newer than config/hp_phenotype-ncbigene/config.yaml
-# File output/tsv/hp_phenotype-ncbigene.tsv is newer than input/hp_phenotype/download.lock
-# => Preserving output/tsv/hp_phenotype-ncbigene.tsv
-### Update TSV for hp_phenotype-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
+# File output/tsv/hp_phenotype-ncbigene.tsv is older than input/hp_phenotype/download.lock
+## Update config/hp_phenotype-ncbigene/config.yaml => output/tsv/hp_phenotype-ncbigene.tsv
+< 2023-10-13T18:16:36 hp_phenotype-ncbigene
+togoid-config config/hp_phenotype-ncbigene update
+# Error: output/tsv/hp_phenotype-ncbigene.tsv new file size per old 201 / 2953229 = 6.806109516058525e-05 < 0.5
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <html><head>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <title>301 Moved Permanently</title>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </head><body>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <h1>Moved Permanently</h1>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <p>The document has moved <a href=https://biosciencedbc.jp/news/20231002-01.html>here</a>.</p>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </body></html>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <html><head>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <title>301 Moved Permanently</title>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </head><body>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <h1>Moved Permanently</h1>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML <p>The document has moved <a href=https://biosciencedbc.jp/news/20231002-01.html>here</a>.</p>
+# Error: output/tsv/hp_phenotype-ncbigene.tsv seems to contain HTML </body></html>
+# Failure: output/tsv/hp_phenotype-ncbigene.tsv is not updated
+> 2023-10-13T18:16:37 hp_phenotype-ncbigene
+### Update TSV for hp_phenotype-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hp_phenotype-omim_phenotype.tsv is newer than config/hp_phenotype-omim_phenotype/config.yaml
-# File output/tsv/hp_phenotype-omim_phenotype.tsv is newer than input/hp_phenotype/download.lock
-# => Preserving output/tsv/hp_phenotype-omim_phenotype.tsv
-### Update TSV for hp_phenotype-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
+# File output/tsv/hp_phenotype-omim_phenotype.tsv is older than input/hp_phenotype/download.lock
+## Update config/hp_phenotype-omim_phenotype/config.yaml => output/tsv/hp_phenotype-omim_phenotype.tsv
+< 2023-10-13T18:16:37 hp_phenotype-omim_phenotype
+togoid-config config/hp_phenotype-omim_phenotype update
+# Success: output/tsv/hp_phenotype-omim_phenotype.tsv is updated
+> 2023-10-13T18:16:37 hp_phenotype-omim_phenotype
+### Update TSV for hp_phenotype-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/hp_phenotype-orphanet_phenotype.tsv is newer than config/hp_phenotype-orphanet_phenotype/config.yaml
-# File output/tsv/hp_phenotype-orphanet_phenotype.tsv is newer than input/hp_phenotype/download.lock
-# => Preserving output/tsv/hp_phenotype-orphanet_phenotype.tsv
-### Update TSV for insdc-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/insdc-bioproject.tsv is newer than config/insdc-bioproject/config.yaml
-# File output/tsv/insdc-bioproject.tsv has no timestamp file
-# File output/tsv/insdc-bioproject.tsv is created 6.998549192919283 days ago (will be updated when >5 days)
+# File output/tsv/hp_phenotype-orphanet_phenotype.tsv is older than input/hp_phenotype/download.lock
+## Update config/hp_phenotype-orphanet_phenotype/config.yaml => output/tsv/hp_phenotype-orphanet_phenotype.tsv
+< 2023-10-13T18:16:37 hp_phenotype-orphanet_phenotype
+togoid-config config/hp_phenotype-orphanet_phenotype update
+# Success: output/tsv/hp_phenotype-orphanet_phenotype.tsv is updated
+> 2023-10-13T18:16:38 hp_phenotype-orphanet_phenotype
+### Update TSV for insdc-bioproject if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/insdc-bioproject.tsv is older than config/insdc-bioproject/config.yaml
 ## Update config/insdc-bioproject/config.yaml => output/tsv/insdc-bioproject.tsv
-< 2023-10-06T18:13:09 insdc-bioproject
+< 2023-10-13T18:16:38 insdc-bioproject
 togoid-config config/insdc-bioproject update
 # Success: output/tsv/insdc-bioproject.tsv is updated
-> 2023-10-06T18:13:33 insdc-bioproject
-### Update TSV for insdc-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/insdc-biosample.tsv is newer than config/insdc-biosample/config.yaml
-# File output/tsv/insdc-biosample.tsv has no timestamp file
-# File output/tsv/insdc-biosample.tsv is created 6.997946871604282 days ago (will be updated when >5 days)
+> 2023-10-13T18:17:05 insdc-bioproject
+### Update TSV for insdc-biosample if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/insdc-biosample.tsv is older than config/insdc-biosample/config.yaml
 ## Update config/insdc-biosample/config.yaml => output/tsv/insdc-biosample.tsv
-< 2023-10-06T18:13:33 insdc-biosample
+< 2023-10-13T18:17:05 insdc-biosample
 togoid-config config/insdc-biosample update
 # Success: output/tsv/insdc-biosample.tsv is updated
-> 2023-10-06T18:14:50 insdc-biosample
-### Update TSV for insdc_master-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/insdc_master-bioproject.tsv is newer than config/insdc_master-bioproject/config.yaml
-# File output/tsv/insdc_master-bioproject.tsv has no timestamp file
-# File output/tsv/insdc_master-bioproject.tsv is created 6.998829831957858 days ago (will be updated when >5 days)
+> 2023-10-13T18:18:23 insdc-biosample
+### Update TSV for insdc_master-bioproject if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/insdc_master-bioproject.tsv is older than config/insdc_master-bioproject/config.yaml
 ## Update config/insdc_master-bioproject/config.yaml => output/tsv/insdc_master-bioproject.tsv
-< 2023-10-06T18:14:50 insdc_master-bioproject
+< 2023-10-13T18:18:23 insdc_master-bioproject
 togoid-config config/insdc_master-bioproject update
 # Success: output/tsv/insdc_master-bioproject.tsv is updated
-> 2023-10-06T18:14:52 insdc_master-bioproject
-### Update TSV for insdc_master-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/insdc_master-biosample.tsv is newer than config/insdc_master-biosample/config.yaml
-# File output/tsv/insdc_master-biosample.tsv has no timestamp file
-# File output/tsv/insdc_master-biosample.tsv is created 6.998829597559305 days ago (will be updated when >5 days)
+> 2023-10-13T18:18:24 insdc_master-bioproject
+### Update TSV for insdc_master-biosample if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/insdc_master-biosample.tsv is older than config/insdc_master-biosample/config.yaml
 ## Update config/insdc_master-biosample/config.yaml => output/tsv/insdc_master-biosample.tsv
-< 2023-10-06T18:14:52 insdc_master-biosample
+< 2023-10-13T18:18:24 insdc_master-biosample
 togoid-config config/insdc_master-biosample update
 # Success: output/tsv/insdc_master-biosample.tsv is updated
-> 2023-10-06T18:14:53 insdc_master-biosample
+> 2023-10-13T18:18:26 insdc_master-biosample
 ### Update TSV for interpro-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/interpro-go.tsv is newer than config/interpro-go/config.yaml
 # File output/tsv/interpro-go.tsv is newer than input/interpro/download.lock
@@ -883,6 +912,12 @@ togoid-config config/insdc_master-biosample update
 # File output/tsv/interpro-pfam.tsv is newer than config/interpro-pfam/config.yaml
 # File output/tsv/interpro-pfam.tsv is newer than input/interpro/download.lock
 # => Preserving output/tsv/interpro-pfam.tsv
+### Update TSV for interpro-prosite if check_tsv_filesize true or check_config_timestamp true or check_tsv_timestamp true
+## Update config/interpro-prosite/config.yaml => output/tsv/interpro-prosite.tsv
+< 2023-10-13T18:18:26 interpro-prosite
+togoid-config config/interpro-prosite update
+# Success: output/tsv/interpro-prosite.tsv is updated
+> 2023-10-13T18:18:28 interpro-prosite
 ### Update TSV for interpro-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/interpro-pubmed.tsv is newer than config/interpro-pubmed/config.yaml
 # File output/tsv/interpro-pubmed.tsv is newer than input/interpro/download.lock
@@ -891,726 +926,733 @@ togoid-config config/insdc_master-biosample update
 # File output/tsv/interpro-reactome_pathway.tsv is newer than config/interpro-reactome_pathway/config.yaml
 # File output/tsv/interpro-reactome_pathway.tsv is newer than input/interpro/download.lock
 # => Preserving output/tsv/interpro-reactome_pathway.tsv
+### Update TSV for interpro-smart if check_tsv_filesize true or check_config_timestamp true or check_tsv_timestamp true
+## Update config/interpro-smart/config.yaml => output/tsv/interpro-smart.tsv
+< 2023-10-13T18:18:28 interpro-smart
+togoid-config config/interpro-smart update
+# Success: output/tsv/interpro-smart.tsv is updated
+> 2023-10-13T18:18:29 interpro-smart
 ### Update TSV for interpro-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/interpro-uniprot.tsv is newer than config/interpro-uniprot/config.yaml
 # File output/tsv/interpro-uniprot.tsv is newer than input/interpro/download.lock
 # => Preserving output/tsv/interpro-uniprot.tsv
-### Update TSV for jga_study-jga_dataset if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/jga_study-jga_dataset.tsv is newer than config/jga_study-jga_dataset/config.yaml
-# File output/tsv/jga_study-jga_dataset.tsv has no timestamp file
-# File output/tsv/jga_study-jga_dataset.tsv is created 6.998841504167604 days ago (will be updated when >5 days)
+### Update TSV for jga_study-jga_dataset if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/jga_study-jga_dataset.tsv is older than config/jga_study-jga_dataset/config.yaml
 ## Update config/jga_study-jga_dataset/config.yaml => output/tsv/jga_study-jga_dataset.tsv
-< 2023-10-06T18:14:53 jga_study-jga_dataset
+< 2023-10-13T18:18:29 jga_study-jga_dataset
 togoid-config config/jga_study-jga_dataset update
 # Success: output/tsv/jga_study-jga_dataset.tsv is updated
-> 2023-10-06T18:14:54 jga_study-jga_dataset
-### Update TSV for jga_study-nbdc_human_db if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/jga_study-nbdc_human_db.tsv is newer than config/jga_study-nbdc_human_db/config.yaml
-# File output/tsv/jga_study-nbdc_human_db.tsv has no timestamp file
-# File output/tsv/jga_study-nbdc_human_db.tsv is created 6.998840834430486 days ago (will be updated when >5 days)
+> 2023-10-13T18:18:29 jga_study-jga_dataset
+### Update TSV for jga_study-nbdc_human_db if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/jga_study-nbdc_human_db.tsv is older than config/jga_study-nbdc_human_db/config.yaml
 ## Update config/jga_study-nbdc_human_db/config.yaml => output/tsv/jga_study-nbdc_human_db.tsv
-< 2023-10-06T18:14:54 jga_study-nbdc_human_db
+< 2023-10-13T18:18:29 jga_study-nbdc_human_db
 togoid-config config/jga_study-nbdc_human_db update
 # Success: output/tsv/jga_study-nbdc_human_db.tsv is updated
-> 2023-10-06T18:14:54 jga_study-nbdc_human_db
-### Update TSV for jga_study-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/jga_study-pubmed.tsv is newer than config/jga_study-pubmed/config.yaml
-# File output/tsv/jga_study-pubmed.tsv has no timestamp file
-# File output/tsv/jga_study-pubmed.tsv is created 6.998840126409316 days ago (will be updated when >5 days)
+> 2023-10-13T18:18:30 jga_study-nbdc_human_db
+### Update TSV for jga_study-pubmed if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/jga_study-pubmed.tsv is older than config/jga_study-pubmed/config.yaml
 ## Update config/jga_study-pubmed/config.yaml => output/tsv/jga_study-pubmed.tsv
-< 2023-10-06T18:14:54 jga_study-pubmed
+< 2023-10-13T18:18:30 jga_study-pubmed
 togoid-config config/jga_study-pubmed update
 # Success: output/tsv/jga_study-pubmed.tsv is updated
-> 2023-10-06T18:14:55 jga_study-pubmed
+> 2023-10-13T18:18:30 jga_study-pubmed
 ### Update TSV for lipidmaps-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/lipidmaps-chebi.tsv is newer than config/lipidmaps-chebi/config.yaml
 # File output/tsv/lipidmaps-chebi.tsv has no timestamp file
-# File output/tsv/lipidmaps-chebi.tsv is created 6.998787197551505 days ago (will be updated when >5 days)
+# File output/tsv/lipidmaps-chebi.tsv is created 7.00245325181875 days ago (will be updated when >5 days)
 ## Update config/lipidmaps-chebi/config.yaml => output/tsv/lipidmaps-chebi.tsv
-< 2023-10-06T18:14:55 lipidmaps-chebi
+< 2023-10-13T18:18:30 lipidmaps-chebi
 togoid-config config/lipidmaps-chebi update
 # Success: output/tsv/lipidmaps-chebi.tsv is updated
-> 2023-10-06T18:14:58 lipidmaps-chebi
+> 2023-10-13T18:18:33 lipidmaps-chebi
 ### Update TSV for lipidmaps-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/lipidmaps-inchi_key.tsv is newer than config/lipidmaps-inchi_key/config.yaml
 # File output/tsv/lipidmaps-inchi_key.tsv has no timestamp file
-# File output/tsv/lipidmaps-inchi_key.tsv is created 6.998784863634734 days ago (will be updated when >5 days)
+# File output/tsv/lipidmaps-inchi_key.tsv is created 7.002452771504803 days ago (will be updated when >5 days)
 ## Update config/lipidmaps-inchi_key/config.yaml => output/tsv/lipidmaps-inchi_key.tsv
-< 2023-10-06T18:14:58 lipidmaps-inchi_key
+< 2023-10-13T18:18:33 lipidmaps-inchi_key
 togoid-config config/lipidmaps-inchi_key update
 # Success: output/tsv/lipidmaps-inchi_key.tsv is updated
-> 2023-10-06T18:15:01 lipidmaps-inchi_key
+> 2023-10-13T18:18:36 lipidmaps-inchi_key
 ### Update TSV for lipidmaps-swisslipids if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/lipidmaps-swisslipids.tsv is newer than config/lipidmaps-swisslipids/config.yaml
 # File output/tsv/lipidmaps-swisslipids.tsv has no timestamp file
-# File output/tsv/lipidmaps-swisslipids.tsv is created 6.998781349342535 days ago (will be updated when >5 days)
+# File output/tsv/lipidmaps-swisslipids.tsv is created 7.002458063574989 days ago (will be updated when >5 days)
 ## Update config/lipidmaps-swisslipids/config.yaml => output/tsv/lipidmaps-swisslipids.tsv
-< 2023-10-06T18:15:01 lipidmaps-swisslipids
+< 2023-10-13T18:18:36 lipidmaps-swisslipids
 togoid-config config/lipidmaps-swisslipids update
 # Success: output/tsv/lipidmaps-swisslipids.tsv is updated
-> 2023-10-06T18:15:04 lipidmaps-swisslipids
+> 2023-10-13T18:18:38 lipidmaps-swisslipids
 ### Update TSV for mbgd_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mbgd_gene-uniprot.tsv is newer than config/mbgd_gene-uniprot/config.yaml
 # File output/tsv/mbgd_gene-uniprot.tsv has no timestamp file
-# File output/tsv/mbgd_gene-uniprot.tsv is created 6.970093178130764 days ago (will be updated when >5 days)
+# File output/tsv/mbgd_gene-uniprot.tsv is created 6.973708488748692 days ago (will be updated when >5 days)
 ## Update config/mbgd_gene-uniprot/config.yaml => output/tsv/mbgd_gene-uniprot.tsv
-< 2023-10-06T18:15:04 mbgd_gene-uniprot
+< 2023-10-13T18:18:38 mbgd_gene-uniprot
 togoid-config config/mbgd_gene-uniprot update
 # Success: output/tsv/mbgd_gene-uniprot.tsv is updated
-> 2023-10-06T18:56:30 mbgd_gene-uniprot
+> 2023-10-13T19:00:53 mbgd_gene-uniprot
 ### Update TSV for mbgd_organism-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mbgd_organism-taxonomy.tsv is newer than config/mbgd_organism-taxonomy/config.yaml
 # File output/tsv/mbgd_organism-taxonomy.tsv has no timestamp file
-# File output/tsv/mbgd_organism-taxonomy.tsv is created 6.9988645419818285 days ago (will be updated when >5 days)
+# File output/tsv/mbgd_organism-taxonomy.tsv is created 7.003040830626737 days ago (will be updated when >5 days)
 ## Update config/mbgd_organism-taxonomy/config.yaml => output/tsv/mbgd_organism-taxonomy.tsv
-< 2023-10-06T18:56:30 mbgd_organism-taxonomy
+< 2023-10-13T19:00:53 mbgd_organism-taxonomy
 togoid-config config/mbgd_organism-taxonomy update
 # Success: output/tsv/mbgd_organism-taxonomy.tsv is updated
-> 2023-10-06T18:56:30 mbgd_organism-taxonomy
+> 2023-10-13T19:00:53 mbgd_organism-taxonomy
 ### Update TSV for medgen-hp_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/medgen-hp_phenotype.tsv is newer than config/medgen-hp_phenotype/config.yaml
 # File output/tsv/medgen-hp_phenotype.tsv has no timestamp file
-# File output/tsv/medgen-hp_phenotype.tsv is created 6.99886403012103 days ago (will be updated when >5 days)
+# File output/tsv/medgen-hp_phenotype.tsv is created 7.003039995319375 days ago (will be updated when >5 days)
 ## Update config/medgen-hp_phenotype/config.yaml => output/tsv/medgen-hp_phenotype.tsv
-< 2023-10-06T18:56:30 medgen-hp_phenotype
+< 2023-10-13T19:00:53 medgen-hp_phenotype
 togoid-config config/medgen-hp_phenotype update
 # Success: output/tsv/medgen-hp_phenotype.tsv is updated
-> 2023-10-06T18:56:31 medgen-hp_phenotype
+> 2023-10-13T19:00:54 medgen-hp_phenotype
 ### Update TSV for medgen-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/medgen-mesh.tsv is newer than config/medgen-mesh/config.yaml
 # File output/tsv/medgen-mesh.tsv has no timestamp file
-# File output/tsv/medgen-mesh.tsv is created 6.998864349490868 days ago (will be updated when >5 days)
+# File output/tsv/medgen-mesh.tsv is created 7.003039945654804 days ago (will be updated when >5 days)
 ## Update config/medgen-mesh/config.yaml => output/tsv/medgen-mesh.tsv
-< 2023-10-06T18:56:31 medgen-mesh
+< 2023-10-13T19:00:54 medgen-mesh
 togoid-config config/medgen-mesh update
 # Success: output/tsv/medgen-mesh.tsv is updated
-> 2023-10-06T18:56:31 medgen-mesh
+> 2023-10-13T19:00:54 medgen-mesh
 ### Update TSV for medgen-mondo if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/medgen-mondo.tsv is newer than config/medgen-mondo/config.yaml
 # File output/tsv/medgen-mondo.tsv has no timestamp file
-# File output/tsv/medgen-mondo.tsv is created 6.998864949245926 days ago (will be updated when >5 days)
+# File output/tsv/medgen-mondo.tsv is created 7.003039988950358 days ago (will be updated when >5 days)
 ## Update config/medgen-mondo/config.yaml => output/tsv/medgen-mondo.tsv
-< 2023-10-06T18:56:31 medgen-mondo
+< 2023-10-13T19:00:54 medgen-mondo
 togoid-config config/medgen-mondo update
 # Success: output/tsv/medgen-mondo.tsv is updated
-> 2023-10-06T18:56:32 medgen-mondo
+> 2023-10-13T19:00:55 medgen-mondo
 ### Update TSV for medgen-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/medgen-ncbigene.tsv is newer than config/medgen-ncbigene/config.yaml
 # File output/tsv/medgen-ncbigene.tsv has no timestamp file
-# File output/tsv/medgen-ncbigene.tsv is created 6.998865909473716 days ago (will be updated when >5 days)
+# File output/tsv/medgen-ncbigene.tsv is created 7.003040482705231 days ago (will be updated when >5 days)
 ## Update config/medgen-ncbigene/config.yaml => output/tsv/medgen-ncbigene.tsv
-< 2023-10-06T18:56:32 medgen-ncbigene
+< 2023-10-13T19:00:55 medgen-ncbigene
 togoid-config config/medgen-ncbigene update
 # Success: output/tsv/medgen-ncbigene.tsv is updated
-> 2023-10-06T18:56:32 medgen-ncbigene
+> 2023-10-13T19:00:55 medgen-ncbigene
 ### Update TSV for medgen-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/medgen-omim_phenotype.tsv is newer than config/medgen-omim_phenotype/config.yaml
 # File output/tsv/medgen-omim_phenotype.tsv has no timestamp file
-# File output/tsv/medgen-omim_phenotype.tsv is created 6.99886669948073 days ago (will be updated when >5 days)
+# File output/tsv/medgen-omim_phenotype.tsv is created 7.003035835388461 days ago (will be updated when >5 days)
 ## Update config/medgen-omim_phenotype/config.yaml => output/tsv/medgen-omim_phenotype.tsv
-< 2023-10-06T18:56:32 medgen-omim_phenotype
+< 2023-10-13T19:00:55 medgen-omim_phenotype
 togoid-config config/medgen-omim_phenotype update
 # Success: output/tsv/medgen-omim_phenotype.tsv is updated
-> 2023-10-06T18:56:33 medgen-omim_phenotype
+> 2023-10-13T19:00:56 medgen-omim_phenotype
 ### Update TSV for medgen-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/medgen-orphanet_phenotype.tsv is newer than config/medgen-orphanet_phenotype/config.yaml
 # File output/tsv/medgen-orphanet_phenotype.tsv has no timestamp file
-# File output/tsv/medgen-orphanet_phenotype.tsv is created 6.998872027194097 days ago (will be updated when >5 days)
+# File output/tsv/medgen-orphanet_phenotype.tsv is created 7.003031516376181 days ago (will be updated when >5 days)
 ## Update config/medgen-orphanet_phenotype/config.yaml => output/tsv/medgen-orphanet_phenotype.tsv
-< 2023-10-06T18:56:33 medgen-orphanet_phenotype
+< 2023-10-13T19:00:56 medgen-orphanet_phenotype
 togoid-config config/medgen-orphanet_phenotype update
 # Success: output/tsv/medgen-orphanet_phenotype.tsv is updated
-> 2023-10-06T18:56:34 medgen-orphanet_phenotype
+> 2023-10-13T19:00:56 medgen-orphanet_phenotype
 ### Update TSV for mondo-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mondo-doid.tsv is newer than config/mondo-doid/config.yaml
 # File output/tsv/mondo-doid.tsv has no timestamp file
-# File output/tsv/mondo-doid.tsv is created 6.9988787098836465 days ago (will be updated when >5 days)
+# File output/tsv/mondo-doid.tsv is created 7.00303118759647 days ago (will be updated when >5 days)
 ## Update config/mondo-doid/config.yaml => output/tsv/mondo-doid.tsv
-< 2023-10-06T18:56:34 mondo-doid
+< 2023-10-13T19:00:56 mondo-doid
 togoid-config config/mondo-doid update
 # Success: output/tsv/mondo-doid.tsv is updated
-> 2023-10-06T18:56:34 mondo-doid
+> 2023-10-13T19:00:57 mondo-doid
 ### Update TSV for mondo-hp_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mondo-hp_phenotype.tsv is newer than config/mondo-hp_phenotype/config.yaml
 # File output/tsv/mondo-hp_phenotype.tsv has no timestamp file
-# File output/tsv/mondo-hp_phenotype.tsv is created 6.998880201311886 days ago (will be updated when >5 days)
+# File output/tsv/mondo-hp_phenotype.tsv is created 7.003030365523901 days ago (will be updated when >5 days)
 ## Update config/mondo-hp_phenotype/config.yaml => output/tsv/mondo-hp_phenotype.tsv
-< 2023-10-06T18:56:34 mondo-hp_phenotype
+< 2023-10-13T19:00:57 mondo-hp_phenotype
 togoid-config config/mondo-hp_phenotype update
 # Success: output/tsv/mondo-hp_phenotype.tsv is updated
-> 2023-10-06T18:56:35 mondo-hp_phenotype
+> 2023-10-13T19:00:57 mondo-hp_phenotype
 ### Update TSV for mondo-meddra if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mondo-meddra.tsv is newer than config/mondo-meddra/config.yaml
 # File output/tsv/mondo-meddra.tsv has no timestamp file
-# File output/tsv/mondo-meddra.tsv is created 6.998882596393843 days ago (will be updated when >5 days)
+# File output/tsv/mondo-meddra.tsv is created 7.003030827368773 days ago (will be updated when >5 days)
 ## Update config/mondo-meddra/config.yaml => output/tsv/mondo-meddra.tsv
-< 2023-10-06T18:56:35 mondo-meddra
+< 2023-10-13T19:00:57 mondo-meddra
 togoid-config config/mondo-meddra update
 # Success: output/tsv/mondo-meddra.tsv is updated
-> 2023-10-06T18:56:35 mondo-meddra
+> 2023-10-13T19:00:58 mondo-meddra
 ### Update TSV for mondo-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mondo-mesh.tsv is newer than config/mondo-mesh/config.yaml
 # File output/tsv/mondo-mesh.tsv has no timestamp file
-# File output/tsv/mondo-mesh.tsv is created 6.99888259441441 days ago (will be updated when >5 days)
+# File output/tsv/mondo-mesh.tsv is created 7.00303080605765 days ago (will be updated when >5 days)
 ## Update config/mondo-mesh/config.yaml => output/tsv/mondo-mesh.tsv
-< 2023-10-06T18:56:35 mondo-mesh
+< 2023-10-13T19:00:58 mondo-mesh
 togoid-config config/mondo-mesh update
 # Success: output/tsv/mondo-mesh.tsv is updated
-> 2023-10-06T18:56:36 mondo-mesh
+> 2023-10-13T19:00:58 mondo-mesh
 ### Update TSV for mondo-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mondo-omim_phenotype.tsv is newer than config/mondo-omim_phenotype/config.yaml
 # File output/tsv/mondo-omim_phenotype.tsv has no timestamp file
-# File output/tsv/mondo-omim_phenotype.tsv is created 6.998882760296551 days ago (will be updated when >5 days)
+# File output/tsv/mondo-omim_phenotype.tsv is created 7.003031551408415 days ago (will be updated when >5 days)
 ## Update config/mondo-omim_phenotype/config.yaml => output/tsv/mondo-omim_phenotype.tsv
-< 2023-10-06T18:56:36 mondo-omim_phenotype
+< 2023-10-13T19:00:58 mondo-omim_phenotype
 togoid-config config/mondo-omim_phenotype update
 # Success: output/tsv/mondo-omim_phenotype.tsv is updated
-> 2023-10-06T18:56:36 mondo-omim_phenotype
+> 2023-10-13T19:00:59 mondo-omim_phenotype
 ### Update TSV for mondo-orphanet_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/mondo-orphanet_phenotype.tsv is newer than config/mondo-orphanet_phenotype/config.yaml
 # File output/tsv/mondo-orphanet_phenotype.tsv has no timestamp file
-# File output/tsv/mondo-orphanet_phenotype.tsv is created 6.998882639831112 days ago (will be updated when >5 days)
+# File output/tsv/mondo-orphanet_phenotype.tsv is created 7.003032334411297 days ago (will be updated when >5 days)
 ## Update config/mondo-orphanet_phenotype/config.yaml => output/tsv/mondo-orphanet_phenotype.tsv
-< 2023-10-06T18:56:36 mondo-orphanet_phenotype
+< 2023-10-13T19:00:59 mondo-orphanet_phenotype
 togoid-config config/mondo-orphanet_phenotype update
 # Success: output/tsv/mondo-orphanet_phenotype.tsv is updated
-> 2023-10-06T18:56:37 mondo-orphanet_phenotype
+> 2023-10-13T19:00:59 mondo-orphanet_phenotype
 ### Update TSV for nando-mondo if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/nando-mondo.tsv is newer than config/nando-mondo/config.yaml
 # File output/tsv/nando-mondo.tsv has no timestamp file
-# File output/tsv/nando-mondo.tsv is created 6.998882646575857 days ago (will be updated when >5 days)
+# File output/tsv/nando-mondo.tsv is created 7.0030330047468174 days ago (will be updated when >5 days)
 ## Update config/nando-mondo/config.yaml => output/tsv/nando-mondo.tsv
-< 2023-10-06T18:56:37 nando-mondo
+< 2023-10-13T19:00:59 nando-mondo
 togoid-config config/nando-mondo update
 # Success: output/tsv/nando-mondo.tsv is updated
-> 2023-10-06T18:56:37 nando-mondo
+> 2023-10-13T19:00:59 nando-mondo
 ### Update TSV for ncbigene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-ensembl_gene.tsv is newer than config/ncbigene-ensembl_gene/config.yaml
 # File output/tsv/ncbigene-ensembl_gene.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-ensembl_gene/config.yaml => output/tsv/ncbigene-ensembl_gene.tsv
-< 2023-10-06T18:56:37 ncbigene-ensembl_gene
+< 2023-10-13T19:00:59 ncbigene-ensembl_gene
 togoid-config config/ncbigene-ensembl_gene update
 # Success: output/tsv/ncbigene-ensembl_gene.tsv is updated
-> 2023-10-06T18:57:05 ncbigene-ensembl_gene
+> 2023-10-13T19:01:29 ncbigene-ensembl_gene
 ### Update TSV for ncbigene-ensembl_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-ensembl_protein.tsv is newer than config/ncbigene-ensembl_protein/config.yaml
 # File output/tsv/ncbigene-ensembl_protein.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-ensembl_protein/config.yaml => output/tsv/ncbigene-ensembl_protein.tsv
-< 2023-10-06T18:57:05 ncbigene-ensembl_protein
+< 2023-10-13T19:01:29 ncbigene-ensembl_protein
 togoid-config config/ncbigene-ensembl_protein update
 # Success: output/tsv/ncbigene-ensembl_protein.tsv is updated
-> 2023-10-06T18:57:57 ncbigene-ensembl_protein
+> 2023-10-13T19:02:23 ncbigene-ensembl_protein
 ### Update TSV for ncbigene-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-ensembl_transcript.tsv is newer than config/ncbigene-ensembl_transcript/config.yaml
 # File output/tsv/ncbigene-ensembl_transcript.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-ensembl_transcript/config.yaml => output/tsv/ncbigene-ensembl_transcript.tsv
-< 2023-10-06T18:57:57 ncbigene-ensembl_transcript
+< 2023-10-13T19:02:23 ncbigene-ensembl_transcript
 togoid-config config/ncbigene-ensembl_transcript update
 # Success: output/tsv/ncbigene-ensembl_transcript.tsv is updated
-> 2023-10-06T18:58:43 ncbigene-ensembl_transcript
+> 2023-10-13T19:03:11 ncbigene-ensembl_transcript
 ### Update TSV for ncbigene-flybase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-flybase_gene.tsv is newer than config/ncbigene-flybase_gene/config.yaml
 # File output/tsv/ncbigene-flybase_gene.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-flybase_gene/config.yaml => output/tsv/ncbigene-flybase_gene.tsv
-< 2023-10-06T18:58:43 ncbigene-flybase_gene
+< 2023-10-13T19:03:11 ncbigene-flybase_gene
 togoid-config config/ncbigene-flybase_gene update
 # Success: output/tsv/ncbigene-flybase_gene.tsv is updated
-> 2023-10-06T18:59:59 ncbigene-flybase_gene
+> 2023-10-13T19:04:18 ncbigene-flybase_gene
 ### Update TSV for ncbigene-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-go.tsv is newer than config/ncbigene-go/config.yaml
 # File output/tsv/ncbigene-go.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-go/config.yaml => output/tsv/ncbigene-go.tsv
-< 2023-10-06T18:59:59 ncbigene-go
+< 2023-10-13T19:04:18 ncbigene-go
 togoid-config config/ncbigene-go update
 # Success: output/tsv/ncbigene-go.tsv is updated
-> 2023-10-06T19:00:07 ncbigene-go
+> 2023-10-13T19:04:25 ncbigene-go
 ### Update TSV for ncbigene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-hgnc.tsv is newer than config/ncbigene-hgnc/config.yaml
 # File output/tsv/ncbigene-hgnc.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-hgnc/config.yaml => output/tsv/ncbigene-hgnc.tsv
-< 2023-10-06T19:00:07 ncbigene-hgnc
+< 2023-10-13T19:04:25 ncbigene-hgnc
 togoid-config config/ncbigene-hgnc update
 # Success: output/tsv/ncbigene-hgnc.tsv is updated
-> 2023-10-06T19:00:08 ncbigene-hgnc
+> 2023-10-13T19:04:26 ncbigene-hgnc
 ### Update TSV for ncbigene-mgi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-mgi.tsv is newer than config/ncbigene-mgi/config.yaml
 # File output/tsv/ncbigene-mgi.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-mgi/config.yaml => output/tsv/ncbigene-mgi.tsv
-< 2023-10-06T19:00:08 ncbigene-mgi
+< 2023-10-13T19:04:26 ncbigene-mgi
 togoid-config config/ncbigene-mgi update
 # Success: output/tsv/ncbigene-mgi.tsv is updated
-> 2023-10-06T19:01:04 ncbigene-mgi
+> 2023-10-13T19:05:25 ncbigene-mgi
 ### Update TSV for ncbigene-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-mirbase.tsv is newer than config/ncbigene-mirbase/config.yaml
 # File output/tsv/ncbigene-mirbase.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-mirbase/config.yaml => output/tsv/ncbigene-mirbase.tsv
-< 2023-10-06T19:01:04 ncbigene-mirbase
+< 2023-10-13T19:05:25 ncbigene-mirbase
 togoid-config config/ncbigene-mirbase update
 # Success: output/tsv/ncbigene-mirbase.tsv is updated
-> 2023-10-06T19:02:34 ncbigene-mirbase
+> 2023-10-13T19:06:55 ncbigene-mirbase
 ### Update TSV for ncbigene-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-omim_gene.tsv is newer than config/ncbigene-omim_gene/config.yaml
 # File output/tsv/ncbigene-omim_gene.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-omim_gene/config.yaml => output/tsv/ncbigene-omim_gene.tsv
-< 2023-10-06T19:02:34 ncbigene-omim_gene
+< 2023-10-13T19:06:55 ncbigene-omim_gene
 togoid-config config/ncbigene-omim_gene update
 # Success: output/tsv/ncbigene-omim_gene.tsv is updated
-> 2023-10-06T19:02:34 ncbigene-omim_gene
+> 2023-10-13T19:06:55 ncbigene-omim_gene
 ### Update TSV for ncbigene-refseq_genomic if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-refseq_genomic.tsv is newer than config/ncbigene-refseq_genomic/config.yaml
 # File output/tsv/ncbigene-refseq_genomic.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-refseq_genomic/config.yaml => output/tsv/ncbigene-refseq_genomic.tsv
-< 2023-10-06T19:02:34 ncbigene-refseq_genomic
+< 2023-10-13T19:06:55 ncbigene-refseq_genomic
 togoid-config config/ncbigene-refseq_genomic update
 # Success: output/tsv/ncbigene-refseq_genomic.tsv is updated
-> 2023-10-06T19:06:30 ncbigene-refseq_genomic
+> 2023-10-13T19:10:46 ncbigene-refseq_genomic
 ### Update TSV for ncbigene-refseq_protein if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-refseq_protein.tsv is newer than config/ncbigene-refseq_protein/config.yaml
 # File output/tsv/ncbigene-refseq_protein.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-refseq_protein/config.yaml => output/tsv/ncbigene-refseq_protein.tsv
-< 2023-10-06T19:06:30 ncbigene-refseq_protein
+< 2023-10-13T19:10:46 ncbigene-refseq_protein
 togoid-config config/ncbigene-refseq_protein update
 # Success: output/tsv/ncbigene-refseq_protein.tsv is updated
-> 2023-10-06T19:11:01 ncbigene-refseq_protein
+> 2023-10-13T19:15:34 ncbigene-refseq_protein
 ### Update TSV for ncbigene-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-refseq_rna.tsv is newer than config/ncbigene-refseq_rna/config.yaml
 # File output/tsv/ncbigene-refseq_rna.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-refseq_rna/config.yaml => output/tsv/ncbigene-refseq_rna.tsv
-< 2023-10-06T19:11:01 ncbigene-refseq_rna
+< 2023-10-13T19:15:34 ncbigene-refseq_rna
 togoid-config config/ncbigene-refseq_rna update
 # Success: output/tsv/ncbigene-refseq_rna.tsv is updated
-> 2023-10-06T19:14:43 ncbigene-refseq_rna
+> 2023-10-13T19:19:14 ncbigene-refseq_rna
 ### Update TSV for ncbigene-rgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-rgd.tsv is newer than config/ncbigene-rgd/config.yaml
 # File output/tsv/ncbigene-rgd.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-rgd/config.yaml => output/tsv/ncbigene-rgd.tsv
-< 2023-10-06T19:14:43 ncbigene-rgd
+< 2023-10-13T19:19:14 ncbigene-rgd
 togoid-config config/ncbigene-rgd update
 # Success: output/tsv/ncbigene-rgd.tsv is updated
-> 2023-10-06T19:15:37 ncbigene-rgd
+> 2023-10-13T19:20:09 ncbigene-rgd
 ### Update TSV for ncbigene-sgd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-sgd.tsv is newer than config/ncbigene-sgd/config.yaml
 # File output/tsv/ncbigene-sgd.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-sgd/config.yaml => output/tsv/ncbigene-sgd.tsv
-< 2023-10-06T19:15:37 ncbigene-sgd
+< 2023-10-13T19:20:09 ncbigene-sgd
 togoid-config config/ncbigene-sgd update
 # Success: output/tsv/ncbigene-sgd.tsv is updated
-> 2023-10-06T19:16:41 ncbigene-sgd
+> 2023-10-13T19:21:13 ncbigene-sgd
 ### Update TSV for ncbigene-tair if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-tair.tsv is newer than config/ncbigene-tair/config.yaml
 # File output/tsv/ncbigene-tair.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-tair/config.yaml => output/tsv/ncbigene-tair.tsv
-< 2023-10-06T19:16:41 ncbigene-tair
+< 2023-10-13T19:21:13 ncbigene-tair
 togoid-config config/ncbigene-tair update
 # Success: output/tsv/ncbigene-tair.tsv is updated
-> 2023-10-06T19:17:44 ncbigene-tair
+> 2023-10-13T19:22:16 ncbigene-tair
 ### Update TSV for ncbigene-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-taxonomy.tsv is newer than config/ncbigene-taxonomy/config.yaml
 # File output/tsv/ncbigene-taxonomy.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-taxonomy/config.yaml => output/tsv/ncbigene-taxonomy.tsv
-< 2023-10-06T19:17:44 ncbigene-taxonomy
+< 2023-10-13T19:22:16 ncbigene-taxonomy
 togoid-config config/ncbigene-taxonomy update
 # Success: output/tsv/ncbigene-taxonomy.tsv is updated
-> 2023-10-06T19:18:24 ncbigene-taxonomy
+> 2023-10-13T19:22:57 ncbigene-taxonomy
 ### Update TSV for ncbigene-vgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-vgnc.tsv is newer than config/ncbigene-vgnc/config.yaml
 # File output/tsv/ncbigene-vgnc.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-vgnc/config.yaml => output/tsv/ncbigene-vgnc.tsv
-< 2023-10-06T19:18:24 ncbigene-vgnc
+< 2023-10-13T19:22:57 ncbigene-vgnc
 togoid-config config/ncbigene-vgnc update
 # Success: output/tsv/ncbigene-vgnc.tsv is updated
-> 2023-10-06T19:19:28 ncbigene-vgnc
+> 2023-10-13T19:24:01 ncbigene-vgnc
 ### Update TSV for ncbigene-wormbase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-wormbase_gene.tsv is newer than config/ncbigene-wormbase_gene/config.yaml
 # File output/tsv/ncbigene-wormbase_gene.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-wormbase_gene/config.yaml => output/tsv/ncbigene-wormbase_gene.tsv
-< 2023-10-06T19:19:28 ncbigene-wormbase_gene
+< 2023-10-13T19:24:01 ncbigene-wormbase_gene
 togoid-config config/ncbigene-wormbase_gene update
 # Success: output/tsv/ncbigene-wormbase_gene.tsv is updated
-> 2023-10-06T19:20:32 ncbigene-wormbase_gene
+> 2023-10-13T19:25:05 ncbigene-wormbase_gene
 ### Update TSV for ncbigene-xenbase_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-xenbase_gene.tsv is newer than config/ncbigene-xenbase_gene/config.yaml
 # File output/tsv/ncbigene-xenbase_gene.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-xenbase_gene/config.yaml => output/tsv/ncbigene-xenbase_gene.tsv
-< 2023-10-06T19:20:32 ncbigene-xenbase_gene
+< 2023-10-13T19:25:05 ncbigene-xenbase_gene
 togoid-config config/ncbigene-xenbase_gene update
 # Success: output/tsv/ncbigene-xenbase_gene.tsv is updated
-> 2023-10-06T19:21:36 ncbigene-xenbase_gene
+> 2023-10-13T19:26:09 ncbigene-xenbase_gene
 ### Update TSV for ncbigene-zfin_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncbigene-zfin_gene.tsv is newer than config/ncbigene-zfin_gene/config.yaml
 # File output/tsv/ncbigene-zfin_gene.tsv is older than input/ncbigene/download.lock
 ## Update config/ncbigene-zfin_gene/config.yaml => output/tsv/ncbigene-zfin_gene.tsv
-< 2023-10-06T19:21:36 ncbigene-zfin_gene
+< 2023-10-13T19:26:09 ncbigene-zfin_gene
 togoid-config config/ncbigene-zfin_gene update
 # Success: output/tsv/ncbigene-zfin_gene.tsv is updated
-> 2023-10-06T19:22:40 ncbigene-zfin_gene
+> 2023-10-13T19:27:13 ncbigene-zfin_gene
 ### Update TSV for ncit_disease-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/ncit_disease-ncit_tissue.tsv is newer than config/ncit_disease-ncit_tissue/config.yaml
 # File output/tsv/ncit_disease-ncit_tissue.tsv has no timestamp file
-# File output/tsv/ncit_disease-ncit_tissue.tsv is created 6.999633740751215 days ago (will be updated when >5 days)
+# File output/tsv/ncit_disease-ncit_tissue.tsv is created 7.003110770474479 days ago (will be updated when >5 days)
 ## Update config/ncit_disease-ncit_tissue/config.yaml => output/tsv/ncit_disease-ncit_tissue.tsv
-< 2023-10-06T19:22:40 ncit_disease-ncit_tissue
+< 2023-10-13T19:27:13 ncit_disease-ncit_tissue
 togoid-config config/ncit_disease-ncit_tissue update
 # Success: output/tsv/ncit_disease-ncit_tissue.tsv is updated
-> 2023-10-06T19:22:44 ncit_disease-ncit_tissue
-### Update TSV for oma_protein-ensembl_gene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+> 2023-10-13T19:27:15 ncit_disease-ncit_tissue
+### Update TSV for oma_protein-ensembl_gene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp false
 # File output/tsv/oma_protein-ensembl_gene.tsv is older than config/oma_protein-ensembl_gene/config.yaml
 ## Update config/oma_protein-ensembl_gene/config.yaml => output/tsv/oma_protein-ensembl_gene.tsv
-< 2023-10-06T19:22:44 oma_protein-ensembl_gene
+< 2023-10-13T19:27:15 oma_protein-ensembl_gene
 togoid-config config/oma_protein-ensembl_gene update
 # Success: output/tsv/oma_protein-ensembl_gene.tsv is updated
-> 2023-10-06T19:28:45 oma_protein-ensembl_gene
-### Update TSV for oma_protein-ensembl_transcript if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+> 2023-10-13T19:34:15 oma_protein-ensembl_gene
+### Update TSV for oma_protein-ensembl_transcript if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp false
 # File output/tsv/oma_protein-ensembl_transcript.tsv is older than config/oma_protein-ensembl_transcript/config.yaml
 ## Update config/oma_protein-ensembl_transcript/config.yaml => output/tsv/oma_protein-ensembl_transcript.tsv
-< 2023-10-06T19:28:45 oma_protein-ensembl_transcript
+< 2023-10-13T19:34:15 oma_protein-ensembl_transcript
 togoid-config config/oma_protein-ensembl_transcript update
 # Success: output/tsv/oma_protein-ensembl_transcript.tsv is updated
-> 2023-10-06T19:35:15 oma_protein-ensembl_transcript
-### Update TSV for oma_protein-ncbigene if check_tsv_filesize true or check_config_timestamp true or check_tsv_timestamp true
+> 2023-10-13T19:43:07 oma_protein-ensembl_transcript
+### Update TSV for oma_protein-ncbigene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp false
+# File output/tsv/oma_protein-ncbigene.tsv is older than config/oma_protein-ncbigene/config.yaml
 ## Update config/oma_protein-ncbigene/config.yaml => output/tsv/oma_protein-ncbigene.tsv
-< 2023-10-06T19:35:15 oma_protein-ncbigene
+< 2023-10-13T19:43:07 oma_protein-ncbigene
 togoid-config config/oma_protein-ncbigene update
 # Success: output/tsv/oma_protein-ncbigene.tsv is updated
-> 2023-10-06T19:35:30 oma_protein-ncbigene
-### Update TSV for oma_protein-uniprot if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+> 2023-10-13T19:43:23 oma_protein-ncbigene
+### Update TSV for oma_protein-uniprot if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp false
 # File output/tsv/oma_protein-uniprot.tsv is older than config/oma_protein-uniprot/config.yaml
 ## Update config/oma_protein-uniprot/config.yaml => output/tsv/oma_protein-uniprot.tsv
-< 2023-10-06T19:35:30 oma_protein-uniprot
+< 2023-10-13T19:43:23 oma_protein-uniprot
 togoid-config config/oma_protein-uniprot update
 # Success: output/tsv/oma_protein-uniprot.tsv is updated
-> 2023-10-06T19:35:38 oma_protein-uniprot
+> 2023-10-13T19:43:31 oma_protein-uniprot
 ### Update TSV for orphanet_gene-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_gene-ensembl_gene.tsv is newer than config/orphanet_gene-ensembl_gene/config.yaml
 # File output/tsv/orphanet_gene-ensembl_gene.tsv has no timestamp file
-# File output/tsv/orphanet_gene-ensembl_gene.tsv is created 6.934368596433634 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_gene-ensembl_gene.tsv is created 7.005466813942071 days ago (will be updated when >5 days)
 ## Update config/orphanet_gene-ensembl_gene/config.yaml => output/tsv/orphanet_gene-ensembl_gene.tsv
-< 2023-10-06T19:35:38 orphanet_gene-ensembl_gene
+< 2023-10-13T19:43:31 orphanet_gene-ensembl_gene
 togoid-config config/orphanet_gene-ensembl_gene update
 # Success: output/tsv/orphanet_gene-ensembl_gene.tsv is updated
-> 2023-10-06T19:35:38 orphanet_gene-ensembl_gene
+> 2023-10-13T19:43:31 orphanet_gene-ensembl_gene
 ### Update TSV for orphanet_gene-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_gene-hgnc.tsv is newer than config/orphanet_gene-hgnc/config.yaml
 # File output/tsv/orphanet_gene-hgnc.tsv has no timestamp file
-# File output/tsv/orphanet_gene-hgnc.tsv is created 6.934369801037489 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_gene-hgnc.tsv is created 7.005466858861678 days ago (will be updated when >5 days)
 ## Update config/orphanet_gene-hgnc/config.yaml => output/tsv/orphanet_gene-hgnc.tsv
-< 2023-10-06T19:35:38 orphanet_gene-hgnc
+< 2023-10-13T19:43:31 orphanet_gene-hgnc
 togoid-config config/orphanet_gene-hgnc update
 # Success: output/tsv/orphanet_gene-hgnc.tsv is updated
-> 2023-10-06T19:35:39 orphanet_gene-hgnc
+> 2023-10-13T19:43:32 orphanet_gene-hgnc
 ### Update TSV for orphanet_gene-omim_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_gene-omim_gene.tsv is newer than config/orphanet_gene-omim_gene/config.yaml
 # File output/tsv/orphanet_gene-omim_gene.tsv has no timestamp file
-# File output/tsv/orphanet_gene-omim_gene.tsv is created 6.934371783446042 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_gene-omim_gene.tsv is created 7.005466598799398 days ago (will be updated when >5 days)
 ## Update config/orphanet_gene-omim_gene/config.yaml => output/tsv/orphanet_gene-omim_gene.tsv
-< 2023-10-06T19:35:39 orphanet_gene-omim_gene
+< 2023-10-13T19:43:32 orphanet_gene-omim_gene
 togoid-config config/orphanet_gene-omim_gene update
 # Success: output/tsv/orphanet_gene-omim_gene.tsv is updated
-> 2023-10-06T19:35:39 orphanet_gene-omim_gene
+> 2023-10-13T19:43:32 orphanet_gene-omim_gene
 ### Update TSV for orphanet_gene-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_gene-uniprot.tsv is newer than config/orphanet_gene-uniprot/config.yaml
 # File output/tsv/orphanet_gene-uniprot.tsv has no timestamp file
-# File output/tsv/orphanet_gene-uniprot.tsv is created 6.934372214247985 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_gene-uniprot.tsv is created 7.005466962034155 days ago (will be updated when >5 days)
 ## Update config/orphanet_gene-uniprot/config.yaml => output/tsv/orphanet_gene-uniprot.tsv
-< 2023-10-06T19:35:39 orphanet_gene-uniprot
+< 2023-10-13T19:43:32 orphanet_gene-uniprot
 togoid-config config/orphanet_gene-uniprot update
 # Success: output/tsv/orphanet_gene-uniprot.tsv is updated
-> 2023-10-06T19:35:40 orphanet_gene-uniprot
+> 2023-10-13T19:43:33 orphanet_gene-uniprot
 ### Update TSV for orphanet_phenotype-meddra if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_phenotype-meddra.tsv is newer than config/orphanet_phenotype-meddra/config.yaml
 # File output/tsv/orphanet_phenotype-meddra.tsv has no timestamp file
-# File output/tsv/orphanet_phenotype-meddra.tsv is created 6.934373610059734 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_phenotype-meddra.tsv is created 7.005467470200382 days ago (will be updated when >5 days)
 ## Update config/orphanet_phenotype-meddra/config.yaml => output/tsv/orphanet_phenotype-meddra.tsv
-< 2023-10-06T19:35:40 orphanet_phenotype-meddra
+< 2023-10-13T19:43:33 orphanet_phenotype-meddra
 togoid-config config/orphanet_phenotype-meddra update
 # Success: output/tsv/orphanet_phenotype-meddra.tsv is updated
-> 2023-10-06T19:35:40 orphanet_phenotype-meddra
+> 2023-10-13T19:43:33 orphanet_phenotype-meddra
 ### Update TSV for orphanet_phenotype-mesh if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_phenotype-mesh.tsv is newer than config/orphanet_phenotype-mesh/config.yaml
 # File output/tsv/orphanet_phenotype-mesh.tsv has no timestamp file
-# File output/tsv/orphanet_phenotype-mesh.tsv is created 6.934373555558958 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_phenotype-mesh.tsv is created 7.005467982495846 days ago (will be updated when >5 days)
 ## Update config/orphanet_phenotype-mesh/config.yaml => output/tsv/orphanet_phenotype-mesh.tsv
-< 2023-10-06T19:35:40 orphanet_phenotype-mesh
+< 2023-10-13T19:43:33 orphanet_phenotype-mesh
 togoid-config config/orphanet_phenotype-mesh update
 # Success: output/tsv/orphanet_phenotype-mesh.tsv is updated
-> 2023-10-06T19:35:41 orphanet_phenotype-mesh
+> 2023-10-13T19:43:34 orphanet_phenotype-mesh
 ### Update TSV for orphanet_phenotype-omim_phenotype if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_phenotype-omim_phenotype.tsv is newer than config/orphanet_phenotype-omim_phenotype/config.yaml
 # File output/tsv/orphanet_phenotype-omim_phenotype.tsv has no timestamp file
-# File output/tsv/orphanet_phenotype-omim_phenotype.tsv is created 6.934374373669884 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_phenotype-omim_phenotype.tsv is created 7.005468418814016 days ago (will be updated when >5 days)
 ## Update config/orphanet_phenotype-omim_phenotype/config.yaml => output/tsv/orphanet_phenotype-omim_phenotype.tsv
-< 2023-10-06T19:35:41 orphanet_phenotype-omim_phenotype
+< 2023-10-13T19:43:34 orphanet_phenotype-omim_phenotype
 togoid-config config/orphanet_phenotype-omim_phenotype update
 # Success: output/tsv/orphanet_phenotype-omim_phenotype.tsv is updated
-> 2023-10-06T19:35:41 orphanet_phenotype-omim_phenotype
+> 2023-10-13T19:43:34 orphanet_phenotype-omim_phenotype
 ### Update TSV for orphanet_phenotype-orphanet_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/orphanet_phenotype-orphanet_gene.tsv is newer than config/orphanet_phenotype-orphanet_gene/config.yaml
 # File output/tsv/orphanet_phenotype-orphanet_gene.tsv has no timestamp file
-# File output/tsv/orphanet_phenotype-orphanet_gene.tsv is created 6.934374545895626 days ago (will be updated when >5 days)
+# File output/tsv/orphanet_phenotype-orphanet_gene.tsv is created 7.00546535396051 days ago (will be updated when >5 days)
 ## Update config/orphanet_phenotype-orphanet_gene/config.yaml => output/tsv/orphanet_phenotype-orphanet_gene.tsv
-< 2023-10-06T19:35:41 orphanet_phenotype-orphanet_gene
+< 2023-10-13T19:43:34 orphanet_phenotype-orphanet_gene
 togoid-config config/orphanet_phenotype-orphanet_gene update
 # Success: output/tsv/orphanet_phenotype-orphanet_gene.tsv is updated
-> 2023-10-06T19:35:42 orphanet_phenotype-orphanet_gene
+> 2023-10-13T19:43:35 orphanet_phenotype-orphanet_gene
 ### Update TSV for pdb-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pdb-go.tsv is newer than config/pdb-go/config.yaml
 # File output/tsv/pdb-go.tsv has no timestamp file
-# File output/tsv/pdb-go.tsv is created 6.934336427830892 days ago (will be updated when >5 days)
+# File output/tsv/pdb-go.tsv is created 7.005424193173611 days ago (will be updated when >5 days)
 ## Update config/pdb-go/config.yaml => output/tsv/pdb-go.tsv
-< 2023-10-06T19:35:42 pdb-go
+< 2023-10-13T19:43:35 pdb-go
 togoid-config config/pdb-go update
 # Success: output/tsv/pdb-go.tsv is updated
-> 2023-10-06T19:35:46 pdb-go
+> 2023-10-13T19:43:39 pdb-go
 ### Update TSV for pdb-interpro if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pdb-interpro.tsv is newer than config/pdb-interpro/config.yaml
 # File output/tsv/pdb-interpro.tsv has no timestamp file
-# File output/tsv/pdb-interpro.tsv is created 6.934357543554421 days ago (will be updated when >5 days)
+# File output/tsv/pdb-interpro.tsv is created 7.0054572076459145 days ago (will be updated when >5 days)
 ## Update config/pdb-interpro/config.yaml => output/tsv/pdb-interpro.tsv
-< 2023-10-06T19:35:46 pdb-interpro
+< 2023-10-13T19:43:39 pdb-interpro
 togoid-config config/pdb-interpro update
 # Success: output/tsv/pdb-interpro.tsv is updated
-> 2023-10-06T19:35:48 pdb-interpro
+> 2023-10-13T19:43:41 pdb-interpro
 ### Update TSV for pdb-pdb_ccd if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pdb-pdb_ccd.tsv is newer than config/pdb-pdb_ccd/config.yaml
 # File output/tsv/pdb-pdb_ccd.tsv has no timestamp file
-# File output/tsv/pdb-pdb_ccd.tsv is created 6.934363349506158 days ago (will be updated when >5 days)
+# File output/tsv/pdb-pdb_ccd.tsv is created 7.005462098297026 days ago (will be updated when >5 days)
 ## Update config/pdb-pdb_ccd/config.yaml => output/tsv/pdb-pdb_ccd.tsv
-< 2023-10-06T19:35:48 pdb-pdb_ccd
+< 2023-10-13T19:43:41 pdb-pdb_ccd
 togoid-config config/pdb-pdb_ccd update
 # Success: output/tsv/pdb-pdb_ccd.tsv is updated
-> 2023-10-06T19:35:49 pdb-pdb_ccd
+> 2023-10-13T19:43:42 pdb-pdb_ccd
 ### Update TSV for pdb-pfam if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pdb-pfam.tsv is newer than config/pdb-pfam/config.yaml
 # File output/tsv/pdb-pfam.tsv has no timestamp file
-# File output/tsv/pdb-pfam.tsv is created 6.9343638786253585 days ago (will be updated when >5 days)
+# File output/tsv/pdb-pfam.tsv is created 7.005464846592234 days ago (will be updated when >5 days)
 ## Update config/pdb-pfam/config.yaml => output/tsv/pdb-pfam.tsv
-< 2023-10-06T19:35:49 pdb-pfam
+< 2023-10-13T19:43:42 pdb-pfam
 togoid-config config/pdb-pfam update
 # Success: output/tsv/pdb-pfam.tsv is updated
-> 2023-10-06T19:35:50 pdb-pfam
+> 2023-10-13T19:43:43 pdb-pfam
 ### Update TSV for pdb-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pdb-uniprot.tsv is newer than config/pdb-uniprot/config.yaml
 # File output/tsv/pdb-uniprot.tsv has no timestamp file
-# File output/tsv/pdb-uniprot.tsv is created 6.934362461435335 days ago (will be updated when >5 days)
+# File output/tsv/pdb-uniprot.tsv is created 7.005464720895416 days ago (will be updated when >5 days)
 ## Update config/pdb-uniprot/config.yaml => output/tsv/pdb-uniprot.tsv
-< 2023-10-06T19:35:50 pdb-uniprot
+< 2023-10-13T19:43:43 pdb-uniprot
 togoid-config config/pdb-uniprot update
 # Success: output/tsv/pdb-uniprot.tsv is updated
-> 2023-10-06T19:35:51 pdb-uniprot
+> 2023-10-13T19:43:44 pdb-uniprot
+### Update TSV for prosite-prosite_prorule if check_tsv_filesize true or check_config_timestamp true or check_tsv_timestamp true
+## Update config/prosite-prosite_prorule/config.yaml => output/tsv/prosite-prosite_prorule.tsv
+< 2023-10-13T19:43:44 prosite-prosite_prorule
+togoid-config config/prosite-prosite_prorule update
+# Success: output/tsv/prosite-prosite_prorule.tsv is updated
+> 2023-10-13T19:43:45 prosite-prosite_prorule
 ### Update TSV for pubchem_compound-atc if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
 # File output/tsv/pubchem_compound-atc.tsv is older than config/pubchem_compound-atc/config.yaml
 ## Update config/pubchem_compound-atc/config.yaml => output/tsv/pubchem_compound-atc.tsv
-< 2023-10-06T19:35:51 pubchem_compound-atc
+< 2023-10-13T19:43:45 pubchem_compound-atc
 togoid-config config/pubchem_compound-atc update
 # Error: output/tsv/pubchem_compound-atc.tsv new file size per old 28643 / 72636 = 0.39433614185803184 < 0.5
 # Failure: output/tsv/pubchem_compound-atc.tsv is not updated
-> 2023-10-06T19:35:51 pubchem_compound-atc
+> 2023-10-13T19:43:46 pubchem_compound-atc
 ### Update TSV for pubchem_compound-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_compound-chebi.tsv is newer than config/pubchem_compound-chebi/config.yaml
 # File output/tsv/pubchem_compound-chebi.tsv has no timestamp file
-# File output/tsv/pubchem_compound-chebi.tsv is created 6.9343671328525 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_compound-chebi.tsv is created 7.005492484749306 days ago (will be updated when >5 days)
 ## Update config/pubchem_compound-chebi/config.yaml => output/tsv/pubchem_compound-chebi.tsv
-< 2023-10-06T19:35:51 pubchem_compound-chebi
+< 2023-10-13T19:43:46 pubchem_compound-chebi
 togoid-config config/pubchem_compound-chebi update
 # Success: output/tsv/pubchem_compound-chebi.tsv is updated
-> 2023-10-06T19:35:52 pubchem_compound-chebi
+> 2023-10-13T19:43:47 pubchem_compound-chebi
 ### Update TSV for pubchem_compound-chembl_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_compound-chembl_compound.tsv is newer than config/pubchem_compound-chembl_compound/config.yaml
 # File output/tsv/pubchem_compound-chembl_compound.tsv has no timestamp file
-# File output/tsv/pubchem_compound-chembl_compound.tsv is created 6.934320656835532 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_compound-chembl_compound.tsv is created 7.005447667578865 days ago (will be updated when >5 days)
 ## Update config/pubchem_compound-chembl_compound/config.yaml => output/tsv/pubchem_compound-chembl_compound.tsv
-< 2023-10-06T19:35:52 pubchem_compound-chembl_compound
+< 2023-10-13T19:43:47 pubchem_compound-chembl_compound
 togoid-config config/pubchem_compound-chembl_compound update
 # Success: output/tsv/pubchem_compound-chembl_compound.tsv is updated
-> 2023-10-06T19:35:57 pubchem_compound-chembl_compound
+> 2023-10-13T19:43:55 pubchem_compound-chembl_compound
 ### Update TSV for pubchem_compound-drugbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_compound-drugbank.tsv is newer than config/pubchem_compound-drugbank/config.yaml
 # File output/tsv/pubchem_compound-drugbank.tsv has no timestamp file
-# File output/tsv/pubchem_compound-drugbank.tsv is created 6.934373052375578 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_compound-drugbank.tsv is created 7.005529831877269 days ago (will be updated when >5 days)
 ## Update config/pubchem_compound-drugbank/config.yaml => output/tsv/pubchem_compound-drugbank.tsv
-< 2023-10-06T19:35:57 pubchem_compound-drugbank
+< 2023-10-13T19:43:55 pubchem_compound-drugbank
 togoid-config config/pubchem_compound-drugbank update
 # Success: output/tsv/pubchem_compound-drugbank.tsv is updated
-> 2023-10-06T19:35:57 pubchem_compound-drugbank
+> 2023-10-13T19:43:55 pubchem_compound-drugbank
 ### Update TSV for pubchem_compound-glytoucan if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_compound-glytoucan.tsv is newer than config/pubchem_compound-glytoucan/config.yaml
 # File output/tsv/pubchem_compound-glytoucan.tsv has no timestamp file
-# File output/tsv/pubchem_compound-glytoucan.tsv is created 6.93437217587625 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_compound-glytoucan.tsv is created 7.005532125308286 days ago (will be updated when >5 days)
 ## Update config/pubchem_compound-glytoucan/config.yaml => output/tsv/pubchem_compound-glytoucan.tsv
-< 2023-10-06T19:35:57 pubchem_compound-glytoucan
+< 2023-10-13T19:43:55 pubchem_compound-glytoucan
 togoid-config config/pubchem_compound-glytoucan update
 # Success: output/tsv/pubchem_compound-glytoucan.tsv is updated
-> 2023-10-06T19:35:57 pubchem_compound-glytoucan
+> 2023-10-13T19:43:56 pubchem_compound-glytoucan
 ### Update TSV for pubchem_compound-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_compound-inchi_key.tsv is newer than config/pubchem_compound-inchi_key/config.yaml
 # File output/tsv/pubchem_compound-inchi_key.tsv has no timestamp file
-# File output/tsv/pubchem_compound-inchi_key.tsv is created 6.9280778666669685 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_compound-inchi_key.tsv is created 6.999615413993345 days ago (will be updated when >5 days)
 ## Update config/pubchem_compound-inchi_key/config.yaml => output/tsv/pubchem_compound-inchi_key.tsv
-< 2023-10-06T19:35:57 pubchem_compound-inchi_key
+< 2023-10-13T19:43:56 pubchem_compound-inchi_key
 togoid-config config/pubchem_compound-inchi_key update
 # Success: output/tsv/pubchem_compound-inchi_key.tsv is updated
-> 2023-10-06T19:44:29 pubchem_compound-inchi_key
+> 2023-10-13T19:52:55 pubchem_compound-inchi_key
 ### Update TSV for pubchem_pathway-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_pathway-ncbigene.tsv is newer than config/pubchem_pathway-ncbigene/config.yaml
 # File output/tsv/pubchem_pathway-ncbigene.tsv has no timestamp file
-# File output/tsv/pubchem_pathway-ncbigene.tsv is created 6.933998106636551 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_pathway-ncbigene.tsv is created 7.00584721414647 days ago (will be updated when >5 days)
 ## Update config/pubchem_pathway-ncbigene/config.yaml => output/tsv/pubchem_pathway-ncbigene.tsv
-< 2023-10-06T19:44:29 pubchem_pathway-ncbigene
+< 2023-10-13T19:52:55 pubchem_pathway-ncbigene
 togoid-config config/pubchem_pathway-ncbigene update
 # Success: output/tsv/pubchem_pathway-ncbigene.tsv is updated
-> 2023-10-06T19:44:30 pubchem_pathway-ncbigene
+> 2023-10-13T19:52:56 pubchem_pathway-ncbigene
 ### Update TSV for pubchem_pathway-pathbank if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_pathway-pathbank.tsv is newer than config/pubchem_pathway-pathbank/config.yaml
 # File output/tsv/pubchem_pathway-pathbank.tsv has no timestamp file
-# File output/tsv/pubchem_pathway-pathbank.tsv is created 6.9339973076278705 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_pathway-pathbank.tsv is created 7.005849468401609 days ago (will be updated when >5 days)
 ## Update config/pubchem_pathway-pathbank/config.yaml => output/tsv/pubchem_pathway-pathbank.tsv
-< 2023-10-06T19:44:30 pubchem_pathway-pathbank
+< 2023-10-13T19:52:56 pubchem_pathway-pathbank
 togoid-config config/pubchem_pathway-pathbank update
 # Success: output/tsv/pubchem_pathway-pathbank.tsv is updated
-> 2023-10-06T19:44:30 pubchem_pathway-pathbank
+> 2023-10-13T19:52:56 pubchem_pathway-pathbank
 ### Update TSV for pubchem_pathway-pubchem_compound if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_pathway-pubchem_compound.tsv is newer than config/pubchem_pathway-pubchem_compound/config.yaml
 # File output/tsv/pubchem_pathway-pubchem_compound.tsv has no timestamp file
-# File output/tsv/pubchem_pathway-pubchem_compound.tsv is created 6.9339696075886925 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_pathway-pubchem_compound.tsv is created 7.00582662708059 days ago (will be updated when >5 days)
 ## Update config/pubchem_pathway-pubchem_compound/config.yaml => output/tsv/pubchem_pathway-pubchem_compound.tsv
-< 2023-10-06T19:44:30 pubchem_pathway-pubchem_compound
+< 2023-10-13T19:52:56 pubchem_pathway-pubchem_compound
 togoid-config config/pubchem_pathway-pubchem_compound update
 # Success: output/tsv/pubchem_pathway-pubchem_compound.tsv is updated
-> 2023-10-06T19:44:33 pubchem_pathway-pubchem_compound
+> 2023-10-13T19:53:01 pubchem_pathway-pubchem_compound
 ### Update TSV for pubchem_pathway-reactome_pathway if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_pathway-reactome_pathway.tsv is newer than config/pubchem_pathway-reactome_pathway/config.yaml
 # File output/tsv/pubchem_pathway-reactome_pathway.tsv has no timestamp file
-# File output/tsv/pubchem_pathway-reactome_pathway.tsv is created 6.933995072225209 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_pathway-reactome_pathway.tsv is created 7.005871496748958 days ago (will be updated when >5 days)
 ## Update config/pubchem_pathway-reactome_pathway/config.yaml => output/tsv/pubchem_pathway-reactome_pathway.tsv
-< 2023-10-06T19:44:33 pubchem_pathway-reactome_pathway
+< 2023-10-13T19:53:01 pubchem_pathway-reactome_pathway
 togoid-config config/pubchem_pathway-reactome_pathway update
 # Success: output/tsv/pubchem_pathway-reactome_pathway.tsv is updated
-> 2023-10-06T19:44:33 pubchem_pathway-reactome_pathway
+> 2023-10-13T19:53:01 pubchem_pathway-reactome_pathway
 ### Update TSV for pubchem_pathway-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_pathway-uniprot.tsv is newer than config/pubchem_pathway-uniprot/config.yaml
 # File output/tsv/pubchem_pathway-uniprot.tsv has no timestamp file
-# File output/tsv/pubchem_pathway-uniprot.tsv is created 6.933981375154109 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_pathway-uniprot.tsv is created 7.005860217447743 days ago (will be updated when >5 days)
 ## Update config/pubchem_pathway-uniprot/config.yaml => output/tsv/pubchem_pathway-uniprot.tsv
-< 2023-10-06T19:44:33 pubchem_pathway-uniprot
+< 2023-10-13T19:53:01 pubchem_pathway-uniprot
 togoid-config config/pubchem_pathway-uniprot update
 # Success: output/tsv/pubchem_pathway-uniprot.tsv is updated
-> 2023-10-06T19:44:35 pubchem_pathway-uniprot
+> 2023-10-13T19:53:04 pubchem_pathway-uniprot
 ### Update TSV for pubchem_pathway-wikipathways if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/pubchem_pathway-wikipathways.tsv is newer than config/pubchem_pathway-wikipathways/config.yaml
 # File output/tsv/pubchem_pathway-wikipathways.tsv has no timestamp file
-# File output/tsv/pubchem_pathway-wikipathways.tsv is created 6.933995763053669 days ago (will be updated when >5 days)
+# File output/tsv/pubchem_pathway-wikipathways.tsv is created 7.005886749599907 days ago (will be updated when >5 days)
 ## Update config/pubchem_pathway-wikipathways/config.yaml => output/tsv/pubchem_pathway-wikipathways.tsv
-< 2023-10-06T19:44:35 pubchem_pathway-wikipathways
+< 2023-10-13T19:53:04 pubchem_pathway-wikipathways
 togoid-config config/pubchem_pathway-wikipathways update
 # Success: output/tsv/pubchem_pathway-wikipathways.tsv is updated
-> 2023-10-06T19:44:35 pubchem_pathway-wikipathways
+> 2023-10-13T19:53:05 pubchem_pathway-wikipathways
 ### Update TSV for reactome_pathway-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_pathway-chebi.tsv is newer than config/reactome_pathway-chebi/config.yaml
 # File output/tsv/reactome_pathway-chebi.tsv has no timestamp file
-# File output/tsv/reactome_pathway-chebi.tsv is created 6.933993955591227 days ago (will be updated when >5 days)
+# File output/tsv/reactome_pathway-chebi.tsv is created 7.00588834963522 days ago (will be updated when >5 days)
 ## Update config/reactome_pathway-chebi/config.yaml => output/tsv/reactome_pathway-chebi.tsv
-< 2023-10-06T19:44:35 reactome_pathway-chebi
+< 2023-10-13T19:53:05 reactome_pathway-chebi
 togoid-config config/reactome_pathway-chebi update
 # Success: output/tsv/reactome_pathway-chebi.tsv is updated
-> 2023-10-06T19:44:36 reactome_pathway-chebi
+> 2023-10-13T19:53:05 reactome_pathway-chebi
 ### Update TSV for reactome_pathway-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_pathway-go.tsv is newer than config/reactome_pathway-go/config.yaml
 # File output/tsv/reactome_pathway-go.tsv has no timestamp file
-# File output/tsv/reactome_pathway-go.tsv is created 6.933996291577407 days ago (will be updated when >5 days)
+# File output/tsv/reactome_pathway-go.tsv is created 7.005889844221065 days ago (will be updated when >5 days)
 ## Update config/reactome_pathway-go/config.yaml => output/tsv/reactome_pathway-go.tsv
-< 2023-10-06T19:44:36 reactome_pathway-go
+< 2023-10-13T19:53:05 reactome_pathway-go
 togoid-config config/reactome_pathway-go update
 # Success: output/tsv/reactome_pathway-go.tsv is updated
-> 2023-10-06T19:44:36 reactome_pathway-go
+> 2023-10-13T19:53:06 reactome_pathway-go
 ### Update TSV for reactome_pathway-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_pathway-iuphar_ligand.tsv is newer than config/reactome_pathway-iuphar_ligand/config.yaml
 # File output/tsv/reactome_pathway-iuphar_ligand.tsv has no timestamp file
-# File output/tsv/reactome_pathway-iuphar_ligand.tsv is created 6.933997624444376 days ago (will be updated when >5 days)
+# File output/tsv/reactome_pathway-iuphar_ligand.tsv is created 7.005890474559086 days ago (will be updated when >5 days)
 ## Update config/reactome_pathway-iuphar_ligand/config.yaml => output/tsv/reactome_pathway-iuphar_ligand.tsv
-< 2023-10-06T19:44:36 reactome_pathway-iuphar_ligand
+< 2023-10-13T19:53:06 reactome_pathway-iuphar_ligand
 togoid-config config/reactome_pathway-iuphar_ligand update
 # Success: output/tsv/reactome_pathway-iuphar_ligand.tsv is updated
-> 2023-10-06T19:44:37 reactome_pathway-iuphar_ligand
+> 2023-10-13T19:53:06 reactome_pathway-iuphar_ligand
 ### Update TSV for reactome_pathway-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_pathway-mirbase.tsv is newer than config/reactome_pathway-mirbase/config.yaml
 # File output/tsv/reactome_pathway-mirbase.tsv has no timestamp file
-# File output/tsv/reactome_pathway-mirbase.tsv is created 6.933999649288749 days ago (will be updated when >5 days)
+# File output/tsv/reactome_pathway-mirbase.tsv is created 7.005892999692071 days ago (will be updated when >5 days)
 ## Update config/reactome_pathway-mirbase/config.yaml => output/tsv/reactome_pathway-mirbase.tsv
-< 2023-10-06T19:44:37 reactome_pathway-mirbase
+< 2023-10-13T19:53:06 reactome_pathway-mirbase
 togoid-config config/reactome_pathway-mirbase update
 # Success: output/tsv/reactome_pathway-mirbase.tsv is updated
-> 2023-10-06T19:44:37 reactome_pathway-mirbase
+> 2023-10-13T19:53:06 reactome_pathway-mirbase
 ### Update TSV for reactome_pathway-reactome_reaction if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_pathway-reactome_reaction.tsv is newer than config/reactome_pathway-reactome_reaction/config.yaml
 # File output/tsv/reactome_pathway-reactome_reaction.tsv has no timestamp file
-# File output/tsv/reactome_pathway-reactome_reaction.tsv is created 6.933987249998992 days ago (will be updated when >5 days)
+# File output/tsv/reactome_pathway-reactome_reaction.tsv is created 7.005880111474618 days ago (will be updated when >5 days)
 ## Update config/reactome_pathway-reactome_reaction/config.yaml => output/tsv/reactome_pathway-reactome_reaction.tsv
-< 2023-10-06T19:44:37 reactome_pathway-reactome_reaction
+< 2023-10-13T19:53:06 reactome_pathway-reactome_reaction
 togoid-config config/reactome_pathway-reactome_reaction update
 # Success: output/tsv/reactome_pathway-reactome_reaction.tsv is updated
-> 2023-10-06T19:44:38 reactome_pathway-reactome_reaction
+> 2023-10-13T19:53:07 reactome_pathway-reactome_reaction
 ### Update TSV for reactome_pathway-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_pathway-uniprot.tsv is newer than config/reactome_pathway-uniprot/config.yaml
 # File output/tsv/reactome_pathway-uniprot.tsv has no timestamp file
-# File output/tsv/reactome_pathway-uniprot.tsv is created 6.933986052070336 days ago (will be updated when >5 days)
+# File output/tsv/reactome_pathway-uniprot.tsv is created 7.005877039091227 days ago (will be updated when >5 days)
 ## Update config/reactome_pathway-uniprot/config.yaml => output/tsv/reactome_pathway-uniprot.tsv
-< 2023-10-06T19:44:38 reactome_pathway-uniprot
+< 2023-10-13T19:53:08 reactome_pathway-uniprot
 togoid-config config/reactome_pathway-uniprot update
 # Success: output/tsv/reactome_pathway-uniprot.tsv is updated
-> 2023-10-06T19:44:40 reactome_pathway-uniprot
+> 2023-10-13T19:53:09 reactome_pathway-uniprot
 ### Update TSV for reactome_reaction-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_reaction-chebi.tsv is newer than config/reactome_reaction-chebi/config.yaml
 # File output/tsv/reactome_reaction-chebi.tsv has no timestamp file
-# File output/tsv/reactome_reaction-chebi.tsv is created 6.933997070092257 days ago (will be updated when >5 days)
+# File output/tsv/reactome_reaction-chebi.tsv is created 7.005889928564444 days ago (will be updated when >5 days)
 ## Update config/reactome_reaction-chebi/config.yaml => output/tsv/reactome_reaction-chebi.tsv
-< 2023-10-06T19:44:40 reactome_reaction-chebi
+< 2023-10-13T19:53:09 reactome_reaction-chebi
 togoid-config config/reactome_reaction-chebi update
 # Success: output/tsv/reactome_reaction-chebi.tsv is updated
-> 2023-10-06T19:44:40 reactome_reaction-chebi
+> 2023-10-13T19:53:10 reactome_reaction-chebi
 ### Update TSV for reactome_reaction-go if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_reaction-go.tsv is newer than config/reactome_reaction-go/config.yaml
 # File output/tsv/reactome_reaction-go.tsv has no timestamp file
-# File output/tsv/reactome_reaction-go.tsv is created 6.933998720395625 days ago (will be updated when >5 days)
+# File output/tsv/reactome_reaction-go.tsv is created 7.005890835605162 days ago (will be updated when >5 days)
 ## Update config/reactome_reaction-go/config.yaml => output/tsv/reactome_reaction-go.tsv
-< 2023-10-06T19:44:40 reactome_reaction-go
+< 2023-10-13T19:53:10 reactome_reaction-go
 togoid-config config/reactome_reaction-go update
 # Success: output/tsv/reactome_reaction-go.tsv is updated
-> 2023-10-06T19:44:41 reactome_reaction-go
+> 2023-10-13T19:53:10 reactome_reaction-go
 ### Update TSV for reactome_reaction-iuphar_ligand if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_reaction-iuphar_ligand.tsv is newer than config/reactome_reaction-iuphar_ligand/config.yaml
 # File output/tsv/reactome_reaction-iuphar_ligand.tsv has no timestamp file
-# File output/tsv/reactome_reaction-iuphar_ligand.tsv is created 6.9340014012626625 days ago (will be updated when >5 days)
+# File output/tsv/reactome_reaction-iuphar_ligand.tsv is created 7.005891665070579 days ago (will be updated when >5 days)
 ## Update config/reactome_reaction-iuphar_ligand/config.yaml => output/tsv/reactome_reaction-iuphar_ligand.tsv
-< 2023-10-06T19:44:41 reactome_reaction-iuphar_ligand
+< 2023-10-13T19:53:10 reactome_reaction-iuphar_ligand
 togoid-config config/reactome_reaction-iuphar_ligand update
 # Success: output/tsv/reactome_reaction-iuphar_ligand.tsv is updated
-> 2023-10-06T19:44:41 reactome_reaction-iuphar_ligand
+> 2023-10-13T19:53:10 reactome_reaction-iuphar_ligand
 ### Update TSV for reactome_reaction-mirbase if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_reaction-mirbase.tsv is newer than config/reactome_reaction-mirbase/config.yaml
 # File output/tsv/reactome_reaction-mirbase.tsv has no timestamp file
-# File output/tsv/reactome_reaction-mirbase.tsv is created 6.934002119258183 days ago (will be updated when >5 days)
+# File output/tsv/reactome_reaction-mirbase.tsv is created 7.005892306236146 days ago (will be updated when >5 days)
 ## Update config/reactome_reaction-mirbase/config.yaml => output/tsv/reactome_reaction-mirbase.tsv
-< 2023-10-06T19:44:41 reactome_reaction-mirbase
+< 2023-10-13T19:53:10 reactome_reaction-mirbase
 togoid-config config/reactome_reaction-mirbase update
 # Success: output/tsv/reactome_reaction-mirbase.tsv is updated
-> 2023-10-06T19:44:41 reactome_reaction-mirbase
+> 2023-10-13T19:53:10 reactome_reaction-mirbase
 ### Update TSV for reactome_reaction-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/reactome_reaction-uniprot.tsv is newer than config/reactome_reaction-uniprot/config.yaml
 # File output/tsv/reactome_reaction-uniprot.tsv has no timestamp file
-# File output/tsv/reactome_reaction-uniprot.tsv is created 6.933991047073357 days ago (will be updated when >5 days)
+# File output/tsv/reactome_reaction-uniprot.tsv is created 7.005879678839688 days ago (will be updated when >5 days)
 ## Update config/reactome_reaction-uniprot/config.yaml => output/tsv/reactome_reaction-uniprot.tsv
-< 2023-10-06T19:44:41 reactome_reaction-uniprot
+< 2023-10-13T19:53:10 reactome_reaction-uniprot
 togoid-config config/reactome_reaction-uniprot update
 # Success: output/tsv/reactome_reaction-uniprot.tsv is updated
-> 2023-10-06T19:44:42 reactome_reaction-uniprot
+> 2023-10-13T19:53:12 reactome_reaction-uniprot
 ### Update TSV for refseq_protein-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/refseq_protein-uniprot.tsv is newer than config/refseq_protein-uniprot/config.yaml
 # File output/tsv/refseq_protein-uniprot.tsv is older than input/refseq_protein/download.lock
 ## Update config/refseq_protein-uniprot/config.yaml => output/tsv/refseq_protein-uniprot.tsv
-< 2023-10-06T19:44:42 refseq_protein-uniprot
+< 2023-10-13T19:53:12 refseq_protein-uniprot
 togoid-config config/refseq_protein-uniprot update
 # Success: output/tsv/refseq_protein-uniprot.tsv is updated
-> 2023-10-06T19:52:24 refseq_protein-uniprot
+> 2023-10-13T19:58:20 refseq_protein-uniprot
 ### Update TSV for refseq_rna-dbsnp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/refseq_rna-dbsnp.tsv is newer than config/refseq_rna-dbsnp/config.yaml
 # File output/tsv/refseq_rna-dbsnp.tsv is newer than input/refseq_rna/download.lock
@@ -1666,279 +1708,266 @@ togoid-config config/refseq_protein-uniprot update
 ### Update TSV for sra_accession-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_accession-bioproject.tsv is newer than config/sra_accession-bioproject/config.yaml
 # File output/tsv/sra_accession-bioproject.tsv has no timestamp file
-# File output/tsv/sra_accession-bioproject.tsv is created 6.935540182308392 days ago (will be updated when >5 days)
+# File output/tsv/sra_accession-bioproject.tsv is created 7.00330601122515 days ago (will be updated when >5 days)
 ## Update config/sra_accession-bioproject/config.yaml => output/tsv/sra_accession-bioproject.tsv
-< 2023-10-06T19:52:24 sra_accession-bioproject
+< 2023-10-13T19:58:20 sra_accession-bioproject
 togoid-config config/sra_accession-bioproject update
 # Success: output/tsv/sra_accession-bioproject.tsv is updated
-> 2023-10-06T19:53:35 sra_accession-bioproject
+> 2023-10-13T19:59:28 sra_accession-bioproject
 ### Update TSV for sra_accession-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_accession-biosample.tsv is newer than config/sra_accession-biosample/config.yaml
 # File output/tsv/sra_accession-biosample.tsv has no timestamp file
-# File output/tsv/sra_accession-biosample.tsv is created 6.931818149413958 days ago (will be updated when >5 days)
+# File output/tsv/sra_accession-biosample.tsv is created 6.99946503556676 days ago (will be updated when >5 days)
 ## Update config/sra_accession-biosample/config.yaml => output/tsv/sra_accession-biosample.tsv
-< 2023-10-06T19:53:35 sra_accession-biosample
+< 2023-10-13T19:59:28 sra_accession-biosample
 togoid-config config/sra_accession-biosample update
 # Success: output/tsv/sra_accession-biosample.tsv is updated
-> 2023-10-06T20:00:14 sra_accession-biosample
+> 2023-10-13T20:06:18 sra_accession-biosample
 ### Update TSV for sra_accession-sra_analysis if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_accession-sra_analysis.tsv is newer than config/sra_accession-sra_analysis/config.yaml
 # File output/tsv/sra_accession-sra_analysis.tsv has no timestamp file
-# File output/tsv/sra_accession-sra_analysis.tsv is created 6.935784432357616 days ago (will be updated when >5 days)
+# File output/tsv/sra_accession-sra_analysis.tsv is created 7.003547674537697 days ago (will be updated when >5 days)
 ## Update config/sra_accession-sra_analysis/config.yaml => output/tsv/sra_accession-sra_analysis.tsv
-< 2023-10-06T20:00:14 sra_accession-sra_analysis
+< 2023-10-13T20:06:18 sra_accession-sra_analysis
 togoid-config config/sra_accession-sra_analysis update
 # Success: output/tsv/sra_accession-sra_analysis.tsv is updated
-> 2023-10-06T20:01:11 sra_accession-sra_analysis
+> 2023-10-13T20:07:17 sra_accession-sra_analysis
 ### Update TSV for sra_accession-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_accession-sra_experiment.tsv is newer than config/sra_accession-sra_experiment/config.yaml
 # File output/tsv/sra_accession-sra_experiment.tsv has no timestamp file
-# File output/tsv/sra_accession-sra_experiment.tsv is created 6.9323437299050585 days ago (will be updated when >5 days)
+# File output/tsv/sra_accession-sra_experiment.tsv is created 7.000219181236447 days ago (will be updated when >5 days)
 ## Update config/sra_accession-sra_experiment/config.yaml => output/tsv/sra_accession-sra_experiment.tsv
-< 2023-10-06T20:01:11 sra_accession-sra_experiment
+< 2023-10-13T20:07:17 sra_accession-sra_experiment
 togoid-config config/sra_accession-sra_experiment update
 # Success: output/tsv/sra_accession-sra_experiment.tsv is updated
-> 2023-10-06T20:06:58 sra_accession-sra_experiment
+> 2023-10-13T20:12:58 sra_accession-sra_experiment
 ### Update TSV for sra_accession-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_accession-sra_project.tsv is newer than config/sra_accession-sra_project/config.yaml
 # File output/tsv/sra_accession-sra_project.tsv has no timestamp file
-# File output/tsv/sra_accession-sra_project.tsv is created 6.935691258947685 days ago (will be updated when >5 days)
+# File output/tsv/sra_accession-sra_project.tsv is created 7.003512886388484 days ago (will be updated when >5 days)
 ## Update config/sra_accession-sra_project/config.yaml => output/tsv/sra_accession-sra_project.tsv
-< 2023-10-06T20:06:58 sra_accession-sra_project
+< 2023-10-13T20:12:58 sra_accession-sra_project
 togoid-config config/sra_accession-sra_project update
 # Success: output/tsv/sra_accession-sra_project.tsv is updated
-> 2023-10-06T20:07:54 sra_accession-sra_project
+> 2023-10-13T20:13:58 sra_accession-sra_project
 ### Update TSV for sra_accession-sra_run if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_accession-sra_run.tsv is newer than config/sra_accession-sra_run/config.yaml
 # File output/tsv/sra_accession-sra_run.tsv has no timestamp file
-# File output/tsv/sra_accession-sra_run.tsv is created 6.931757683267118 days ago (will be updated when >5 days)
+# File output/tsv/sra_accession-sra_run.tsv is created 6.999584197196239 days ago (will be updated when >5 days)
 ## Update config/sra_accession-sra_run/config.yaml => output/tsv/sra_accession-sra_run.tsv
-< 2023-10-06T20:07:54 sra_accession-sra_run
+< 2023-10-13T20:13:58 sra_accession-sra_run
 togoid-config config/sra_accession-sra_run update
 # Success: output/tsv/sra_accession-sra_run.tsv is updated
-> 2023-10-06T20:14:34 sra_accession-sra_run
+> 2023-10-13T20:20:26 sra_accession-sra_run
 ### Update TSV for sra_accession-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_accession-sra_sample.tsv is newer than config/sra_accession-sra_sample/config.yaml
 # File output/tsv/sra_accession-sra_sample.tsv has no timestamp file
-# File output/tsv/sra_accession-sra_sample.tsv is created 6.932495881872719 days ago (will be updated when >5 days)
+# File output/tsv/sra_accession-sra_sample.tsv is created 7.00018130045691 days ago (will be updated when >5 days)
 ## Update config/sra_accession-sra_sample/config.yaml => output/tsv/sra_accession-sra_sample.tsv
-< 2023-10-06T20:14:34 sra_accession-sra_sample
+< 2023-10-13T20:20:26 sra_accession-sra_sample
 togoid-config config/sra_accession-sra_sample update
 # Success: output/tsv/sra_accession-sra_sample.tsv is updated
-> 2023-10-06T20:20:11 sra_accession-sra_sample
+> 2023-10-13T20:26:01 sra_accession-sra_sample
 ### Update TSV for sra_experiment-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_experiment-bioproject.tsv is newer than config/sra_experiment-bioproject/config.yaml
 # File output/tsv/sra_experiment-bioproject.tsv has no timestamp file
-# File output/tsv/sra_experiment-bioproject.tsv is created 6.934195006008993 days ago (will be updated when >5 days)
+# File output/tsv/sra_experiment-bioproject.tsv is created 7.001860700687233 days ago (will be updated when >5 days)
 ## Update config/sra_experiment-bioproject/config.yaml => output/tsv/sra_experiment-bioproject.tsv
-< 2023-10-06T20:20:11 sra_experiment-bioproject
+< 2023-10-13T20:26:01 sra_experiment-bioproject
 togoid-config config/sra_experiment-bioproject update
 # Success: output/tsv/sra_experiment-bioproject.tsv is updated
-> 2023-10-06T20:23:20 sra_experiment-bioproject
+> 2023-10-13T20:29:04 sra_experiment-bioproject
 ### Update TSV for sra_experiment-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_experiment-biosample.tsv is newer than config/sra_experiment-biosample/config.yaml
 # File output/tsv/sra_experiment-biosample.tsv has no timestamp file
-# File output/tsv/sra_experiment-biosample.tsv is created 6.934333271105254 days ago (will be updated when >5 days)
+# File output/tsv/sra_experiment-biosample.tsv is created 7.0019742560806835 days ago (will be updated when >5 days)
 ## Update config/sra_experiment-biosample/config.yaml => output/tsv/sra_experiment-biosample.tsv
-< 2023-10-06T20:23:20 sra_experiment-biosample
+< 2023-10-13T20:29:04 sra_experiment-biosample
 togoid-config config/sra_experiment-biosample update
 # Success: output/tsv/sra_experiment-biosample.tsv is updated
-> 2023-10-06T20:26:14 sra_experiment-biosample
+> 2023-10-13T20:32:01 sra_experiment-biosample
 ### Update TSV for sra_experiment-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_experiment-sra_project.tsv is newer than config/sra_experiment-sra_project/config.yaml
 # File output/tsv/sra_experiment-sra_project.tsv has no timestamp file
-# File output/tsv/sra_experiment-sra_project.tsv is created 6.9344886839388655 days ago (will be updated when >5 days)
+# File output/tsv/sra_experiment-sra_project.tsv is created 7.002305626854791 days ago (will be updated when >5 days)
 ## Update config/sra_experiment-sra_project/config.yaml => output/tsv/sra_experiment-sra_project.tsv
-< 2023-10-06T20:26:14 sra_experiment-sra_project
+< 2023-10-13T20:32:01 sra_experiment-sra_project
 togoid-config config/sra_experiment-sra_project update
 # Success: output/tsv/sra_experiment-sra_project.tsv is updated
-> 2023-10-06T20:28:42 sra_experiment-sra_project
+> 2023-10-13T20:34:32 sra_experiment-sra_project
 ### Update TSV for sra_experiment-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_experiment-sra_sample.tsv is newer than config/sra_experiment-sra_sample/config.yaml
 # File output/tsv/sra_experiment-sra_sample.tsv has no timestamp file
-# File output/tsv/sra_experiment-sra_sample.tsv is created 6.934485349409814 days ago (will be updated when >5 days)
+# File output/tsv/sra_experiment-sra_sample.tsv is created 7.002250427676562 days ago (will be updated when >5 days)
 ## Update config/sra_experiment-sra_sample/config.yaml => output/tsv/sra_experiment-sra_sample.tsv
-< 2023-10-06T20:28:42 sra_experiment-sra_sample
+< 2023-10-13T20:34:32 sra_experiment-sra_sample
 togoid-config config/sra_experiment-sra_sample update
 # Success: output/tsv/sra_experiment-sra_sample.tsv is updated
-> 2023-10-06T20:31:17 sra_experiment-sra_sample
+> 2023-10-13T20:37:05 sra_experiment-sra_sample
 ### Update TSV for sra_project-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_project-bioproject.tsv is newer than config/sra_project-bioproject/config.yaml
 # File output/tsv/sra_project-bioproject.tsv has no timestamp file
-# File output/tsv/sra_project-bioproject.tsv is created 6.935606387569849 days ago (will be updated when >5 days)
+# File output/tsv/sra_project-bioproject.tsv is created 7.003368806012708 days ago (will be updated when >5 days)
 ## Update config/sra_project-bioproject/config.yaml => output/tsv/sra_project-bioproject.tsv
-< 2023-10-06T20:31:17 sra_project-bioproject
+< 2023-10-13T20:37:05 sra_project-bioproject
 togoid-config config/sra_project-bioproject update
 # Success: output/tsv/sra_project-bioproject.tsv is updated
-> 2023-10-06T20:32:14 sra_project-bioproject
+> 2023-10-13T20:38:04 sra_project-bioproject
 ### Update TSV for sra_run-bioproject if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_run-bioproject.tsv is newer than config/sra_run-bioproject/config.yaml
 # File output/tsv/sra_run-bioproject.tsv has no timestamp file
-# File output/tsv/sra_run-bioproject.tsv is created 6.933860665969225 days ago (will be updated when >5 days)
+# File output/tsv/sra_run-bioproject.tsv is created 7.001522647379085 days ago (will be updated when >5 days)
 ## Update config/sra_run-bioproject/config.yaml => output/tsv/sra_run-bioproject.tsv
-< 2023-10-06T20:32:14 sra_run-bioproject
+< 2023-10-13T20:38:04 sra_run-bioproject
 togoid-config config/sra_run-bioproject update
 # Success: output/tsv/sra_run-bioproject.tsv is updated
-> 2023-10-06T20:35:53 sra_run-bioproject
+> 2023-10-13T20:41:34 sra_run-bioproject
 ### Update TSV for sra_run-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_run-biosample.tsv is newer than config/sra_run-biosample/config.yaml
 # File output/tsv/sra_run-biosample.tsv has no timestamp file
-# File output/tsv/sra_run-biosample.tsv is created 6.934024205582407 days ago (will be updated when >5 days)
+# File output/tsv/sra_run-biosample.tsv is created 7.001573319285694 days ago (will be updated when >5 days)
 ## Update config/sra_run-biosample/config.yaml => output/tsv/sra_run-biosample.tsv
-< 2023-10-06T20:35:53 sra_run-biosample
+< 2023-10-13T20:41:34 sra_run-biosample
 togoid-config config/sra_run-biosample update
 # Success: output/tsv/sra_run-biosample.tsv is updated
-> 2023-10-06T20:39:18 sra_run-biosample
+> 2023-10-13T20:44:58 sra_run-biosample
 ### Update TSV for sra_run-sra_experiment if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_run-sra_experiment.tsv is newer than config/sra_run-sra_experiment/config.yaml
 # File output/tsv/sra_run-sra_experiment.tsv has no timestamp file
-# File output/tsv/sra_run-sra_experiment.tsv is created 6.934619009979826 days ago (will be updated when >5 days)
+# File output/tsv/sra_run-sra_experiment.tsv is created 7.001976815361828 days ago (will be updated when >5 days)
 ## Update config/sra_run-sra_experiment/config.yaml => output/tsv/sra_run-sra_experiment.tsv
-< 2023-10-06T20:39:18 sra_run-sra_experiment
+< 2023-10-13T20:44:58 sra_run-sra_experiment
 togoid-config config/sra_run-sra_experiment update
 # Success: output/tsv/sra_run-sra_experiment.tsv is updated
-> 2023-10-06T20:42:07 sra_run-sra_experiment
+> 2023-10-13T20:47:46 sra_run-sra_experiment
 ### Update TSV for sra_run-sra_project if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_run-sra_project.tsv is newer than config/sra_run-sra_project/config.yaml
 # File output/tsv/sra_run-sra_project.tsv has no timestamp file
-# File output/tsv/sra_run-sra_project.tsv is created 6.934640124968808 days ago (will be updated when >5 days)
+# File output/tsv/sra_run-sra_project.tsv is created 7.001903173539629 days ago (will be updated when >5 days)
 ## Update config/sra_run-sra_project/config.yaml => output/tsv/sra_run-sra_project.tsv
-< 2023-10-06T20:42:07 sra_run-sra_project
+< 2023-10-13T20:47:46 sra_run-sra_project
 togoid-config config/sra_run-sra_project update
 # Success: output/tsv/sra_run-sra_project.tsv is updated
-> 2023-10-06T20:45:01 sra_run-sra_project
+> 2023-10-13T20:50:44 sra_run-sra_project
 ### Update TSV for sra_run-sra_sample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_run-sra_sample.tsv is newer than config/sra_run-sra_sample/config.yaml
 # File output/tsv/sra_run-sra_sample.tsv has no timestamp file
-# File output/tsv/sra_run-sra_sample.tsv is created 6.934789149138079 days ago (will be updated when >5 days)
+# File output/tsv/sra_run-sra_sample.tsv is created 7.002028628507593 days ago (will be updated when >5 days)
 ## Update config/sra_run-sra_sample/config.yaml => output/tsv/sra_run-sra_sample.tsv
-< 2023-10-06T20:45:01 sra_run-sra_sample
+< 2023-10-13T20:50:44 sra_run-sra_sample
 togoid-config config/sra_run-sra_sample update
 # Success: output/tsv/sra_run-sra_sample.tsv is updated
-> 2023-10-06T20:47:49 sra_run-sra_sample
+> 2023-10-13T20:53:34 sra_run-sra_sample
 ### Update TSV for sra_sample-biosample if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/sra_sample-biosample.tsv is newer than config/sra_sample-biosample/config.yaml
 # File output/tsv/sra_sample-biosample.tsv has no timestamp file
-# File output/tsv/sra_sample-biosample.tsv is created 6.93486624586074 days ago (will be updated when >5 days)
+# File output/tsv/sra_sample-biosample.tsv is created 7.002117929806724 days ago (will be updated when >5 days)
 ## Update config/sra_sample-biosample/config.yaml => output/tsv/sra_sample-biosample.tsv
-< 2023-10-06T20:47:49 sra_sample-biosample
+< 2023-10-13T20:53:34 sra_sample-biosample
 togoid-config config/sra_sample-biosample update
 # Success: output/tsv/sra_sample-biosample.tsv is updated
-> 2023-10-06T20:50:31 sra_sample-biosample
+> 2023-10-13T20:56:13 sra_sample-biosample
 ### Update TSV for swisslipids-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/swisslipids-chebi.tsv is newer than config/swisslipids-chebi/config.yaml
 # File output/tsv/swisslipids-chebi.tsv is older than input/swisslipids/download.lock
 ## Update config/swisslipids-chebi/config.yaml => output/tsv/swisslipids-chebi.tsv
-< 2023-10-06T20:50:31 swisslipids-chebi
+< 2023-10-13T20:56:13 swisslipids-chebi
 togoid-config config/swisslipids-chebi update
 # Success: output/tsv/swisslipids-chebi.tsv is updated
-> 2023-10-06T20:50:45 swisslipids-chebi
+> 2023-10-13T20:56:27 swisslipids-chebi
 ### Update TSV for swisslipids-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/swisslipids-hmdb.tsv is newer than config/swisslipids-hmdb/config.yaml
 # File output/tsv/swisslipids-hmdb.tsv is older than input/swisslipids/download.lock
 ## Update config/swisslipids-hmdb/config.yaml => output/tsv/swisslipids-hmdb.tsv
-< 2023-10-06T20:50:45 swisslipids-hmdb
+< 2023-10-13T20:56:27 swisslipids-hmdb
 togoid-config config/swisslipids-hmdb update
 # Success: output/tsv/swisslipids-hmdb.tsv is updated
-> 2023-10-06T20:51:00 swisslipids-hmdb
+> 2023-10-13T20:56:41 swisslipids-hmdb
 ### Update TSV for swisslipids-inchi_key if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/swisslipids-inchi_key.tsv is newer than config/swisslipids-inchi_key/config.yaml
 # File output/tsv/swisslipids-inchi_key.tsv is older than input/swisslipids/download.lock
 ## Update config/swisslipids-inchi_key/config.yaml => output/tsv/swisslipids-inchi_key.tsv
-< 2023-10-06T20:51:00 swisslipids-inchi_key
+< 2023-10-13T20:56:41 swisslipids-inchi_key
 togoid-config config/swisslipids-inchi_key update
 # Success: output/tsv/swisslipids-inchi_key.tsv is updated
-> 2023-10-06T20:51:12 swisslipids-inchi_key
+> 2023-10-13T20:56:54 swisslipids-inchi_key
 ### Update TSV for taxonomy-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/taxonomy-pubmed.tsv is newer than config/taxonomy-pubmed/config.yaml
 # File output/tsv/taxonomy-pubmed.tsv is older than input/taxonomy/download.lock
 ## Update config/taxonomy-pubmed/config.yaml => output/tsv/taxonomy-pubmed.tsv
-< 2023-10-06T20:51:12 taxonomy-pubmed
+< 2023-10-13T20:56:54 taxonomy-pubmed
 togoid-config config/taxonomy-pubmed update
 awk: cmd. line:1: warning: escape sequence `\|' treated as plain `|'
 # Success: output/tsv/taxonomy-pubmed.tsv is updated
-> 2023-10-06T20:51:13 taxonomy-pubmed
+> 2023-10-13T20:56:55 taxonomy-pubmed
 ### Update TSV for togovar-clinvar if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/togovar-clinvar.tsv is newer than config/togovar-clinvar/config.yaml
 # File output/tsv/togovar-clinvar.tsv has no timestamp file
-# File output/tsv/togovar-clinvar.tsv is created 6.936195967568136 days ago (will be updated when >5 days)
+# File output/tsv/togovar-clinvar.tsv is created 7.00320955687647 days ago (will be updated when >5 days)
 ## Update config/togovar-clinvar/config.yaml => output/tsv/togovar-clinvar.tsv
-< 2023-10-06T20:51:13 togovar-clinvar
+< 2023-10-13T20:56:55 togovar-clinvar
 togoid-config config/togovar-clinvar update
 # Success: output/tsv/togovar-clinvar.tsv is updated
-> 2023-10-06T20:52:17 togovar-clinvar
-### Update TSV for togovar-dbsnp if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/togovar-dbsnp.tsv is newer than config/togovar-dbsnp/config.yaml
-# File output/tsv/togovar-dbsnp.tsv has no timestamp file
-# File output/tsv/togovar-dbsnp.tsv is created 6.93655392779625 days ago (will be updated when >5 days)
+> 2023-10-13T20:58:10 togovar-clinvar
+### Update TSV for togovar-dbsnp if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/togovar-dbsnp.tsv is older than config/togovar-dbsnp/config.yaml
 ## Update config/togovar-dbsnp/config.yaml => output/tsv/togovar-dbsnp.tsv
-< 2023-10-06T20:52:17 togovar-dbsnp
+< 2023-10-13T20:58:10 togovar-dbsnp
 togoid-config config/togovar-dbsnp update
 # Success: output/tsv/togovar-dbsnp.tsv is updated
-> 2023-10-06T20:52:50 togovar-dbsnp
-### Update TSV for togovar-ensembl_gene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/togovar-ensembl_gene.tsv is newer than config/togovar-ensembl_gene/config.yaml
-# File output/tsv/togovar-ensembl_gene.tsv has no timestamp file
-# File output/tsv/togovar-ensembl_gene.tsv is created 6.936495791263727 days ago (will be updated when >5 days)
+> 2023-10-13T20:58:46 togovar-dbsnp
+### Update TSV for togovar-ensembl_gene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/togovar-ensembl_gene.tsv is older than config/togovar-ensembl_gene/config.yaml
 ## Update config/togovar-ensembl_gene/config.yaml => output/tsv/togovar-ensembl_gene.tsv
-< 2023-10-06T20:52:50 togovar-ensembl_gene
+< 2023-10-13T20:58:46 togovar-ensembl_gene
 togoid-config config/togovar-ensembl_gene update
 # Success: output/tsv/togovar-ensembl_gene.tsv is updated
-> 2023-10-06T20:53:30 togovar-ensembl_gene
-### Update TSV for togovar-ensembl_transcript if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/togovar-ensembl_transcript.tsv is newer than config/togovar-ensembl_transcript/config.yaml
-# File output/tsv/togovar-ensembl_transcript.tsv has no timestamp file
-# File output/tsv/togovar-ensembl_transcript.tsv is created 6.9352880384990625 days ago (will be updated when >5 days)
+> 2023-10-13T20:59:27 togovar-ensembl_gene
+### Update TSV for togovar-ensembl_transcript if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp false
+# File output/tsv/togovar-ensembl_transcript.tsv is older than config/togovar-ensembl_transcript/config.yaml
 ## Update config/togovar-ensembl_transcript/config.yaml => output/tsv/togovar-ensembl_transcript.tsv
-< 2023-10-06T20:53:30 togovar-ensembl_transcript
+< 2023-10-13T20:59:27 togovar-ensembl_transcript
 togoid-config config/togovar-ensembl_transcript update
 # Success: output/tsv/togovar-ensembl_transcript.tsv is updated
-> 2023-10-06T20:54:52 togovar-ensembl_transcript
-### Update TSV for togovar-hgnc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/togovar-hgnc.tsv is newer than config/togovar-hgnc/config.yaml
-# File output/tsv/togovar-hgnc.tsv has no timestamp file
-# File output/tsv/togovar-hgnc.tsv is created 6.935971046117477 days ago (will be updated when >5 days)
+> 2023-10-13T21:02:09 togovar-ensembl_transcript
+### Update TSV for togovar-hgnc if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/togovar-hgnc.tsv is older than config/togovar-hgnc/config.yaml
 ## Update config/togovar-hgnc/config.yaml => output/tsv/togovar-hgnc.tsv
-< 2023-10-06T20:54:52 togovar-hgnc
+< 2023-10-13T21:02:09 togovar-hgnc
 togoid-config config/togovar-hgnc update
 # Success: output/tsv/togovar-hgnc.tsv is updated
-> 2023-10-06T20:55:16 togovar-hgnc
-### Update TSV for togovar-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/togovar-ncbigene.tsv is newer than config/togovar-ncbigene/config.yaml
-# File output/tsv/togovar-ncbigene.tsv has no timestamp file
-# File output/tsv/togovar-ncbigene.tsv is created 6.935979170759305 days ago (will be updated when >5 days)
+> 2023-10-13T21:02:33 togovar-hgnc
+### Update TSV for togovar-ncbigene if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/togovar-ncbigene.tsv is older than config/togovar-ncbigene/config.yaml
 ## Update config/togovar-ncbigene/config.yaml => output/tsv/togovar-ncbigene.tsv
-< 2023-10-06T20:55:16 togovar-ncbigene
+< 2023-10-13T21:02:33 togovar-ncbigene
 togoid-config config/togovar-ncbigene update
 # Success: output/tsv/togovar-ncbigene.tsv is updated
-> 2023-10-06T20:55:40 togovar-ncbigene
-### Update TSV for togovar-pubmed if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/togovar-pubmed.tsv is newer than config/togovar-pubmed/config.yaml
-# File output/tsv/togovar-pubmed.tsv has no timestamp file
-# File output/tsv/togovar-pubmed.tsv is created 6.9362337492028585 days ago (will be updated when >5 days)
+> 2023-10-13T21:02:56 togovar-ncbigene
+### Update TSV for togovar-pubmed if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/togovar-pubmed.tsv is older than config/togovar-pubmed/config.yaml
 ## Update config/togovar-pubmed/config.yaml => output/tsv/togovar-pubmed.tsv
-< 2023-10-06T20:55:40 togovar-pubmed
+< 2023-10-13T21:02:56 togovar-pubmed
 togoid-config config/togovar-pubmed update
 # Success: output/tsv/togovar-pubmed.tsv is updated
-> 2023-10-06T20:55:41 togovar-pubmed
-### Update TSV for togovar-refseq_rna if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
-# File output/tsv/togovar-refseq_rna.tsv is newer than config/togovar-refseq_rna/config.yaml
-# File output/tsv/togovar-refseq_rna.tsv has no timestamp file
-# File output/tsv/togovar-refseq_rna.tsv is created 6.935269709090509 days ago (will be updated when >5 days)
+> 2023-10-13T21:02:57 togovar-pubmed
+### Update TSV for togovar-refseq_rna if check_tsv_filesize false or check_config_timestamp true or check_tsv_timestamp true
+# File output/tsv/togovar-refseq_rna.tsv is older than config/togovar-refseq_rna/config.yaml
 ## Update config/togovar-refseq_rna/config.yaml => output/tsv/togovar-refseq_rna.tsv
-< 2023-10-06T20:55:41 togovar-refseq_rna
+< 2023-10-13T21:02:57 togovar-refseq_rna
 togoid-config config/togovar-refseq_rna update
+curl: (18) transfer closed with 1485995312 bytes remaining to read
 # Success: output/tsv/togovar-refseq_rna.tsv is updated
-> 2023-10-06T20:57:19 togovar-refseq_rna
+> 2023-10-13T21:03:57 togovar-refseq_rna
 ### Update TSV for uberon-ncit_tissue if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/uberon-ncit_tissue.tsv is newer than config/uberon-ncit_tissue/config.yaml
 # File output/tsv/uberon-ncit_tissue.tsv has no timestamp file
-# File output/tsv/uberon-ncit_tissue.tsv is created 6.936385284728055 days ago (will be updated when >5 days)
+# File output/tsv/uberon-ncit_tissue.tsv is created 7.004580460818786 days ago (will be updated when >5 days)
 ## Update config/uberon-ncit_tissue/config.yaml => output/tsv/uberon-ncit_tissue.tsv
-< 2023-10-06T20:57:19 uberon-ncit_tissue
+< 2023-10-13T21:03:57 uberon-ncit_tissue
 togoid-config config/uberon-ncit_tissue update
 # Success: output/tsv/uberon-ncit_tissue.tsv is updated
-> 2023-10-06T20:57:21 uberon-ncit_tissue
+> 2023-10-13T21:03:59 uberon-ncit_tissue
 ### Update TSV for uniprot-chembl_target if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp false
 # File output/tsv/uniprot-chembl_target.tsv is newer than config/uniprot-chembl_target/config.yaml
 # File output/tsv/uniprot-chembl_target.tsv is newer than input/uniprot/download.lock
@@ -2018,95 +2047,95 @@ togoid-config config/uberon-ncit_tissue update
 ### Update TSV for uniprot_reference_proteome-assembly_insdc if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is newer than config/uniprot_reference_proteome-assembly_insdc/config.yaml
 # File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv has no timestamp file
-# File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is created 6.936400989732732 days ago (will be updated when >5 days)
+# File output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is created 7.00459752123066 days ago (will be updated when >5 days)
 ## Update config/uniprot_reference_proteome-assembly_insdc/config.yaml => output/tsv/uniprot_reference_proteome-assembly_insdc.tsv
-< 2023-10-06T20:57:21 uniprot_reference_proteome-assembly_insdc
+< 2023-10-13T21:03:59 uniprot_reference_proteome-assembly_insdc
 togoid-config config/uniprot_reference_proteome-assembly_insdc update
 # Success: output/tsv/uniprot_reference_proteome-assembly_insdc.tsv is updated
-> 2023-10-06T20:57:22 uniprot_reference_proteome-assembly_insdc
+> 2023-10-13T21:04:00 uniprot_reference_proteome-assembly_insdc
 ### Update TSV for uniprot_reference_proteome-assembly_refseq if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is newer than config/uniprot_reference_proteome-assembly_refseq/config.yaml
 # File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv has no timestamp file
-# File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is created 6.936404578332952 days ago (will be updated when >5 days)
+# File output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is created 7.004599483127674 days ago (will be updated when >5 days)
 ## Update config/uniprot_reference_proteome-assembly_refseq/config.yaml => output/tsv/uniprot_reference_proteome-assembly_refseq.tsv
-< 2023-10-06T20:57:22 uniprot_reference_proteome-assembly_refseq
+< 2023-10-13T21:04:00 uniprot_reference_proteome-assembly_refseq
 togoid-config config/uniprot_reference_proteome-assembly_refseq update
 # Success: output/tsv/uniprot_reference_proteome-assembly_refseq.tsv is updated
-> 2023-10-06T20:57:22 uniprot_reference_proteome-assembly_refseq
+> 2023-10-13T21:04:00 uniprot_reference_proteome-assembly_refseq
 ### Update TSV for uniprot_reference_proteome-taxonomy if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/uniprot_reference_proteome-taxonomy.tsv is newer than config/uniprot_reference_proteome-taxonomy/config.yaml
 # File output/tsv/uniprot_reference_proteome-taxonomy.tsv has no timestamp file
-# File output/tsv/uniprot_reference_proteome-taxonomy.tsv is created 6.9364025239066205 days ago (will be updated when >5 days)
+# File output/tsv/uniprot_reference_proteome-taxonomy.tsv is created 7.004596926130521 days ago (will be updated when >5 days)
 ## Update config/uniprot_reference_proteome-taxonomy/config.yaml => output/tsv/uniprot_reference_proteome-taxonomy.tsv
-< 2023-10-06T20:57:22 uniprot_reference_proteome-taxonomy
+< 2023-10-13T21:04:00 uniprot_reference_proteome-taxonomy
 togoid-config config/uniprot_reference_proteome-taxonomy update
 # Success: output/tsv/uniprot_reference_proteome-taxonomy.tsv is updated
-> 2023-10-06T20:57:23 uniprot_reference_proteome-taxonomy
+> 2023-10-13T21:04:00 uniprot_reference_proteome-taxonomy
 ### Update TSV for wikipathways-chebi if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/wikipathways-chebi.tsv is newer than config/wikipathways-chebi/config.yaml
 # File output/tsv/wikipathways-chebi.tsv has no timestamp file
-# File output/tsv/wikipathways-chebi.tsv is created 6.9363792091219905 days ago (will be updated when >5 days)
+# File output/tsv/wikipathways-chebi.tsv is created 7.004568509931262 days ago (will be updated when >5 days)
 ## Update config/wikipathways-chebi/config.yaml => output/tsv/wikipathways-chebi.tsv
-< 2023-10-06T20:57:23 wikipathways-chebi
+< 2023-10-13T21:04:00 wikipathways-chebi
 togoid-config config/wikipathways-chebi update
 # Success: output/tsv/wikipathways-chebi.tsv is updated
-> 2023-10-06T20:57:26 wikipathways-chebi
+> 2023-10-13T21:04:03 wikipathways-chebi
 ### Update TSV for wikipathways-doid if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/wikipathways-doid.tsv is newer than config/wikipathways-doid/config.yaml
 # File output/tsv/wikipathways-doid.tsv has no timestamp file
-# File output/tsv/wikipathways-doid.tsv is created 6.936390667996227 days ago (will be updated when >5 days)
+# File output/tsv/wikipathways-doid.tsv is created 7.004578539839445 days ago (will be updated when >5 days)
 ## Update config/wikipathways-doid/config.yaml => output/tsv/wikipathways-doid.tsv
-< 2023-10-06T20:57:26 wikipathways-doid
+< 2023-10-13T21:04:03 wikipathways-doid
 togoid-config config/wikipathways-doid update
 # Success: output/tsv/wikipathways-doid.tsv is updated
-> 2023-10-06T20:57:28 wikipathways-doid
+> 2023-10-13T21:04:05 wikipathways-doid
 ### Update TSV for wikipathways-hmdb if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/wikipathways-hmdb.tsv is newer than config/wikipathways-hmdb/config.yaml
 # File output/tsv/wikipathways-hmdb.tsv has no timestamp file
-# File output/tsv/wikipathways-hmdb.tsv is created 6.936389739146123 days ago (will be updated when >5 days)
+# File output/tsv/wikipathways-hmdb.tsv is created 7.004572128872801 days ago (will be updated when >5 days)
 ## Update config/wikipathways-hmdb/config.yaml => output/tsv/wikipathways-hmdb.tsv
-< 2023-10-06T20:57:28 wikipathways-hmdb
+< 2023-10-13T21:04:05 wikipathways-hmdb
 togoid-config config/wikipathways-hmdb update
 # Success: output/tsv/wikipathways-hmdb.tsv is updated
-> 2023-10-06T20:57:30 wikipathways-hmdb
+> 2023-10-13T21:04:08 wikipathways-hmdb
 ### Update TSV for wikipathways-lipidmaps if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/wikipathways-lipidmaps.tsv is newer than config/wikipathways-lipidmaps/config.yaml
 # File output/tsv/wikipathways-lipidmaps.tsv has no timestamp file
-# File output/tsv/wikipathways-lipidmaps.tsv is created 6.936396904590382 days ago (will be updated when >5 days)
+# File output/tsv/wikipathways-lipidmaps.tsv is created 7.004573491792418 days ago (will be updated when >5 days)
 ## Update config/wikipathways-lipidmaps/config.yaml => output/tsv/wikipathways-lipidmaps.tsv
-< 2023-10-06T20:57:30 wikipathways-lipidmaps
+< 2023-10-13T21:04:08 wikipathways-lipidmaps
 togoid-config config/wikipathways-lipidmaps update
 # Success: output/tsv/wikipathways-lipidmaps.tsv is updated
-> 2023-10-06T20:57:32 wikipathways-lipidmaps
+> 2023-10-13T21:04:09 wikipathways-lipidmaps
 ### Update TSV for wikipathways-ncbigene if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/wikipathways-ncbigene.tsv is newer than config/wikipathways-ncbigene/config.yaml
 # File output/tsv/wikipathways-ncbigene.tsv has no timestamp file
-# File output/tsv/wikipathways-ncbigene.tsv is created 6.936372888868774 days ago (will be updated when >5 days)
+# File output/tsv/wikipathways-ncbigene.tsv is created 7.004542710805405 days ago (will be updated when >5 days)
 ## Update config/wikipathways-ncbigene/config.yaml => output/tsv/wikipathways-ncbigene.tsv
-< 2023-10-06T20:57:32 wikipathways-ncbigene
+< 2023-10-13T21:04:09 wikipathways-ncbigene
 togoid-config config/wikipathways-ncbigene update
 # Success: output/tsv/wikipathways-ncbigene.tsv is updated
-> 2023-10-06T20:57:37 wikipathways-ncbigene
+> 2023-10-13T21:04:14 wikipathways-ncbigene
 ### Update TSV for wikipathways-uniprot if check_tsv_filesize false or check_config_timestamp false or check_tsv_timestamp true
 # File output/tsv/wikipathways-uniprot.tsv is newer than config/wikipathways-uniprot/config.yaml
 # File output/tsv/wikipathways-uniprot.tsv has no timestamp file
-# File output/tsv/wikipathways-uniprot.tsv is created 6.936378073005463 days ago (will be updated when >5 days)
+# File output/tsv/wikipathways-uniprot.tsv is created 7.004536563115915 days ago (will be updated when >5 days)
 ## Update config/wikipathways-uniprot/config.yaml => output/tsv/wikipathways-uniprot.tsv
-< 2023-10-06T20:57:37 wikipathways-uniprot
+< 2023-10-13T21:04:14 wikipathways-uniprot
 togoid-config config/wikipathways-uniprot update
 # Success: output/tsv/wikipathways-uniprot.tsv is updated
-> 2023-10-06T20:57:42 wikipathways-uniprot
+> 2023-10-13T21:04:18 wikipathways-uniprot
 Rule for TSV (output/tsv/bioproject-biosample.tsv)
 ------------------------------
 Investigating output/tsv/bioproject-biosample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 17:40:43 +0900
+timestamp: 2023-10-13 17:40:37 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:bioproject (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:bioproject (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/bioproject-geo_series.tsv)
@@ -2114,12 +2143,12 @@ Rule for TSV (output/tsv/bioproject-geo_series.tsv)
 Investigating output/tsv/bioproject-geo_series.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 17:40:45 +0900
+timestamp: 2023-10-13 17:40:38 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:bioproject (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:bioproject (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/bioproject-pubmed.tsv)
@@ -2127,12 +2156,12 @@ Rule for TSV (output/tsv/bioproject-pubmed.tsv)
 Investigating output/tsv/bioproject-pubmed.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 17:40:46 +0900
+timestamp: 2023-10-13 17:40:39 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:bioproject (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:bioproject (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/bioproject_umbrella-bioproject.tsv)
@@ -2140,12 +2169,12 @@ Rule for TSV (output/tsv/bioproject_umbrella-bioproject.tsv)
 Investigating output/tsv/bioproject_umbrella-bioproject.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 17:40:47 +0900
+timestamp: 2023-10-13 17:40:40 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:bioproject (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:bioproject (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/cellosaurus-ncit_disease.tsv)
@@ -2156,9 +2185,9 @@ task needed: true
 timestamp: 2023-10-06 17:40:53 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:cellosaurus (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:cellosaurus (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/cellosaurus-orphanet_phenotype.tsv)
@@ -2169,9 +2198,9 @@ task needed: true
 timestamp: 2023-10-06 17:40:56 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:cellosaurus (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:cellosaurus (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/chembl_target-ensembl_gene.tsv)
@@ -2182,8 +2211,8 @@ task needed: true
 timestamp: 2023-08-25 17:59:01 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TSV (output/tsv/cog-insdc.tsv)
@@ -2194,9 +2223,9 @@ task needed: true
 timestamp: 2023-07-28 17:55:29 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:cog (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:cog (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/cog-refseq_protein.tsv)
@@ -2207,9 +2236,9 @@ task needed: true
 timestamp: 2023-07-28 17:55:40 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:cog (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:cog (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_gene-affy_probeset.tsv)
@@ -2217,12 +2246,12 @@ Rule for TSV (output/tsv/ensembl_gene-affy_probeset.tsv)
 Investigating output/tsv/ensembl_gene-affy_probeset.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 17:57:50 +0900
+timestamp: 2023-10-13 17:58:04 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_gene-ensembl_protein.tsv)
@@ -2230,12 +2259,12 @@ Rule for TSV (output/tsv/ensembl_gene-ensembl_protein.tsv)
 Investigating output/tsv/ensembl_gene-ensembl_protein.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 17:59:41 +0900
+timestamp: 2023-10-13 18:00:02 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_gene-ensembl_transcript.tsv)
@@ -2243,12 +2272,12 @@ Rule for TSV (output/tsv/ensembl_gene-ensembl_transcript.tsv)
 Investigating output/tsv/ensembl_gene-ensembl_transcript.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:01:40 +0900
+timestamp: 2023-10-13 18:02:06 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_gene-hgnc.tsv)
@@ -2256,12 +2285,12 @@ Rule for TSV (output/tsv/ensembl_gene-hgnc.tsv)
 Investigating output/tsv/ensembl_gene-hgnc.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:01:40 +0900
+timestamp: 2023-10-13 18:02:07 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:18 +0900)
+latest-prerequisite time: 2023-10-13 21:04:18 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_gene-ncbigene.tsv)
@@ -2269,12 +2298,12 @@ Rule for TSV (output/tsv/ensembl_gene-ncbigene.tsv)
 Investigating output/tsv/ensembl_gene-ncbigene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:03:09 +0900
+timestamp: 2023-10-13 18:03:42 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_gene-uniprot.tsv)
@@ -2282,12 +2311,12 @@ Rule for TSV (output/tsv/ensembl_gene-uniprot.tsv)
 Investigating output/tsv/ensembl_gene-uniprot.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:04:29 +0900
+timestamp: 2023-10-13 18:05:10 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_protein-ensembl_transcript.tsv)
@@ -2295,12 +2324,12 @@ Rule for TSV (output/tsv/ensembl_protein-ensembl_transcript.tsv)
 Investigating output/tsv/ensembl_protein-ensembl_transcript.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:06:21 +0900
+timestamp: 2023-10-13 18:07:09 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_transcript-affy_probeset.tsv)
@@ -2308,12 +2337,12 @@ Rule for TSV (output/tsv/ensembl_transcript-affy_probeset.tsv)
 Investigating output/tsv/ensembl_transcript-affy_probeset.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:07:15 +0900
+timestamp: 2023-10-13 18:07:51 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_transcript-go.tsv)
@@ -2321,12 +2350,12 @@ Rule for TSV (output/tsv/ensembl_transcript-go.tsv)
 Investigating output/tsv/ensembl_transcript-go.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:11:13 +0900
+timestamp: 2023-10-13 18:11:53 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_transcript-hgnc.tsv)
@@ -2334,12 +2363,12 @@ Rule for TSV (output/tsv/ensembl_transcript-hgnc.tsv)
 Investigating output/tsv/ensembl_transcript-hgnc.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:11:14 +0900
+timestamp: 2023-10-13 18:11:54 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ensembl_transcript-refseq_rna.tsv)
@@ -2347,12 +2376,36 @@ Rule for TSV (output/tsv/ensembl_transcript-refseq_rna.tsv)
 Investigating output/tsv/ensembl_transcript-refseq_rna.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:12:48 +0900
+timestamp: 2023-10-13 18:13:37 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ensembl (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ensembl (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
+................................
+
+Rule for TSV (output/tsv/hgnc-ccds.tsv)
+------------------------------
+Investigating output/tsv/hgnc-ccds.tsv
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-06 18:13:01 +0900
+pre-requisites: 
+--output/tsv/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
+................................
+
+Rule for TSV (output/tsv/hgnc-pubmed.tsv)
+------------------------------
+Investigating output/tsv/hgnc-pubmed.tsv
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-06 18:13:07 +0900
+pre-requisites: 
+--output/tsv/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TSV (output/tsv/hmdb-chebi.tsv)
@@ -2363,9 +2416,9 @@ task needed: true
 timestamp: 2023-07-03 13:03:28 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:hmdb (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:hmdb (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/hmdb-inchi_key.tsv)
@@ -2376,9 +2429,9 @@ task needed: true
 timestamp: 2023-07-03 13:03:51 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:hmdb (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:hmdb (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/hmdb-pdb_ccd.tsv)
@@ -2389,9 +2442,9 @@ task needed: true
 timestamp: 2023-07-03 13:06:37 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:hmdb (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:hmdb (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/hmdb-pubchem_compound.tsv)
@@ -2402,9 +2455,9 @@ task needed: true
 timestamp: 2023-07-03 13:06:27 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:hmdb (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:hmdb (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/homologene-ncbigene.tsv)
@@ -2415,9 +2468,9 @@ task needed: true
 timestamp: 2023-06-02 19:58:16 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:homologene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:homologene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/hp_inheritance-omim_phenotype.tsv)
@@ -2428,8 +2481,8 @@ task needed: true
 timestamp: 2023-09-29 18:14:52 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TSV (output/tsv/hp_phenotype-ncbigene.tsv)
@@ -2440,9 +2493,9 @@ task needed: true
 timestamp: 2023-09-17 16:18:41 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:hp_phenotype (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:hp_phenotype (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/hp_phenotype-omim_phenotype.tsv)
@@ -2450,12 +2503,12 @@ Rule for TSV (output/tsv/hp_phenotype-omim_phenotype.tsv)
 Investigating output/tsv/hp_phenotype-omim_phenotype.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-09-17 16:18:42 +0900
+timestamp: 2023-10-13 18:16:37 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:hp_phenotype (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:hp_phenotype (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/hp_phenotype-orphanet_phenotype.tsv)
@@ -2463,12 +2516,12 @@ Rule for TSV (output/tsv/hp_phenotype-orphanet_phenotype.tsv)
 Investigating output/tsv/hp_phenotype-orphanet_phenotype.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-09-22 18:14:47 +0900
+timestamp: 2023-10-13 18:16:38 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:hp_phenotype (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:hp_phenotype (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/interpro-go.tsv)
@@ -2479,9 +2532,9 @@ task needed: true
 timestamp: 2023-09-17 16:20:25 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:interpro (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/interpro-pdb.tsv)
@@ -2492,9 +2545,9 @@ task needed: true
 timestamp: 2023-09-17 16:20:27 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:interpro (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/interpro-pfam.tsv)
@@ -2505,9 +2558,22 @@ task needed: true
 timestamp: 2023-09-17 16:20:28 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:interpro (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
+................................
+
+Rule for TSV (output/tsv/interpro-prosite.tsv)
+------------------------------
+Investigating output/tsv/interpro-prosite.tsv
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-13 18:18:28 +0900
+pre-requisites: 
+--output/tsv/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/interpro-pubmed.tsv)
@@ -2518,9 +2584,9 @@ task needed: true
 timestamp: 2023-09-17 16:20:30 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:interpro (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/interpro-reactome_pathway.tsv)
@@ -2531,9 +2597,22 @@ task needed: true
 timestamp: 2023-09-17 16:20:32 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:interpro (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
+................................
+
+Rule for TSV (output/tsv/interpro-smart.tsv)
+------------------------------
+Investigating output/tsv/interpro-smart.tsv
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-13 18:18:29 +0900
+pre-requisites: 
+--output/tsv/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/interpro-uniprot.tsv)
@@ -2544,9 +2623,9 @@ task needed: true
 timestamp: 2023-09-22 22:01:22 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:interpro (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:interpro (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-ensembl_gene.tsv)
@@ -2554,12 +2633,12 @@ Rule for TSV (output/tsv/ncbigene-ensembl_gene.tsv)
 Investigating output/tsv/ncbigene-ensembl_gene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:57:05 +0900
+timestamp: 2023-10-13 19:01:29 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-ensembl_protein.tsv)
@@ -2567,12 +2646,12 @@ Rule for TSV (output/tsv/ncbigene-ensembl_protein.tsv)
 Investigating output/tsv/ncbigene-ensembl_protein.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:57:57 +0900
+timestamp: 2023-10-13 19:02:23 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-ensembl_transcript.tsv)
@@ -2580,12 +2659,12 @@ Rule for TSV (output/tsv/ncbigene-ensembl_transcript.tsv)
 Investigating output/tsv/ncbigene-ensembl_transcript.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:58:43 +0900
+timestamp: 2023-10-13 19:03:11 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-flybase_gene.tsv)
@@ -2593,12 +2672,12 @@ Rule for TSV (output/tsv/ncbigene-flybase_gene.tsv)
 Investigating output/tsv/ncbigene-flybase_gene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 18:59:59 +0900
+timestamp: 2023-10-13 19:04:18 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-go.tsv)
@@ -2606,12 +2685,12 @@ Rule for TSV (output/tsv/ncbigene-go.tsv)
 Investigating output/tsv/ncbigene-go.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:00:07 +0900
+timestamp: 2023-10-13 19:04:25 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-hgnc.tsv)
@@ -2619,12 +2698,12 @@ Rule for TSV (output/tsv/ncbigene-hgnc.tsv)
 Investigating output/tsv/ncbigene-hgnc.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:00:08 +0900
+timestamp: 2023-10-13 19:04:26 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-mgi.tsv)
@@ -2632,12 +2711,12 @@ Rule for TSV (output/tsv/ncbigene-mgi.tsv)
 Investigating output/tsv/ncbigene-mgi.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:01:04 +0900
+timestamp: 2023-10-13 19:05:25 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-mirbase.tsv)
@@ -2645,12 +2724,12 @@ Rule for TSV (output/tsv/ncbigene-mirbase.tsv)
 Investigating output/tsv/ncbigene-mirbase.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:02:34 +0900
+timestamp: 2023-10-13 19:06:54 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-omim_gene.tsv)
@@ -2658,12 +2737,12 @@ Rule for TSV (output/tsv/ncbigene-omim_gene.tsv)
 Investigating output/tsv/ncbigene-omim_gene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:02:34 +0900
+timestamp: 2023-10-13 19:06:55 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-refseq_genomic.tsv)
@@ -2671,12 +2750,12 @@ Rule for TSV (output/tsv/ncbigene-refseq_genomic.tsv)
 Investigating output/tsv/ncbigene-refseq_genomic.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:06:30 +0900
+timestamp: 2023-10-13 19:10:46 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-refseq_protein.tsv)
@@ -2684,12 +2763,12 @@ Rule for TSV (output/tsv/ncbigene-refseq_protein.tsv)
 Investigating output/tsv/ncbigene-refseq_protein.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:11:01 +0900
+timestamp: 2023-10-13 19:15:34 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-refseq_rna.tsv)
@@ -2697,12 +2776,12 @@ Rule for TSV (output/tsv/ncbigene-refseq_rna.tsv)
 Investigating output/tsv/ncbigene-refseq_rna.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:14:43 +0900
+timestamp: 2023-10-13 19:19:14 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-rgd.tsv)
@@ -2710,12 +2789,12 @@ Rule for TSV (output/tsv/ncbigene-rgd.tsv)
 Investigating output/tsv/ncbigene-rgd.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:15:37 +0900
+timestamp: 2023-10-13 19:20:09 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-sgd.tsv)
@@ -2723,12 +2802,12 @@ Rule for TSV (output/tsv/ncbigene-sgd.tsv)
 Investigating output/tsv/ncbigene-sgd.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:16:41 +0900
+timestamp: 2023-10-13 19:21:13 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-tair.tsv)
@@ -2736,12 +2815,12 @@ Rule for TSV (output/tsv/ncbigene-tair.tsv)
 Investigating output/tsv/ncbigene-tair.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:17:44 +0900
+timestamp: 2023-10-13 19:22:16 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-taxonomy.tsv)
@@ -2749,12 +2828,12 @@ Rule for TSV (output/tsv/ncbigene-taxonomy.tsv)
 Investigating output/tsv/ncbigene-taxonomy.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:18:24 +0900
+timestamp: 2023-10-13 19:22:57 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-vgnc.tsv)
@@ -2762,12 +2841,12 @@ Rule for TSV (output/tsv/ncbigene-vgnc.tsv)
 Investigating output/tsv/ncbigene-vgnc.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:19:28 +0900
+timestamp: 2023-10-13 19:24:01 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-wormbase_gene.tsv)
@@ -2775,12 +2854,12 @@ Rule for TSV (output/tsv/ncbigene-wormbase_gene.tsv)
 Investigating output/tsv/ncbigene-wormbase_gene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:20:32 +0900
+timestamp: 2023-10-13 19:25:05 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-xenbase_gene.tsv)
@@ -2788,12 +2867,12 @@ Rule for TSV (output/tsv/ncbigene-xenbase_gene.tsv)
 Investigating output/tsv/ncbigene-xenbase_gene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:21:36 +0900
+timestamp: 2023-10-13 19:26:09 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/ncbigene-zfin_gene.tsv)
@@ -2801,12 +2880,12 @@ Rule for TSV (output/tsv/ncbigene-zfin_gene.tsv)
 Investigating output/tsv/ncbigene-zfin_gene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:22:40 +0900
+timestamp: 2023-10-13 19:27:13 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:ncbigene (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:ncbigene (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/oma_protein-ensembl_gene.tsv)
@@ -2814,12 +2893,12 @@ Rule for TSV (output/tsv/oma_protein-ensembl_gene.tsv)
 Investigating output/tsv/oma_protein-ensembl_gene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:28:45 +0900
+timestamp: 2023-10-13 19:34:15 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:oma (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:oma_protein (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/oma_protein-ensembl_transcript.tsv)
@@ -2827,12 +2906,12 @@ Rule for TSV (output/tsv/oma_protein-ensembl_transcript.tsv)
 Investigating output/tsv/oma_protein-ensembl_transcript.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:35:15 +0900
+timestamp: 2023-10-13 19:43:07 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:oma (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:oma_protein (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/oma_protein-ncbigene.tsv)
@@ -2840,12 +2919,12 @@ Rule for TSV (output/tsv/oma_protein-ncbigene.tsv)
 Investigating output/tsv/oma_protein-ncbigene.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:35:30 +0900
+timestamp: 2023-10-13 19:43:23 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:oma (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:oma_protein (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/oma_protein-uniprot.tsv)
@@ -2853,12 +2932,25 @@ Rule for TSV (output/tsv/oma_protein-uniprot.tsv)
 Investigating output/tsv/oma_protein-uniprot.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:35:38 +0900
+timestamp: 2023-10-13 19:43:31 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:oma (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:oma_protein (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
+................................
+
+Rule for TSV (output/tsv/prosite-prosite_prorule.tsv)
+------------------------------
+Investigating output/tsv/prosite-prosite_prorule.tsv
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-13 19:43:45 +0900
+pre-requisites: 
+--output/tsv/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:prosite (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/pubchem_compound-atc.tsv)
@@ -2869,8 +2961,8 @@ task needed: true
 timestamp: 2023-08-11 19:32:51 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_pathway-chebi.tsv)
@@ -2878,12 +2970,12 @@ Rule for TSV (output/tsv/reactome_pathway-chebi.tsv)
 Investigating output/tsv/reactome_pathway-chebi.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:36 +0900
+timestamp: 2023-10-13 19:53:05 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_pathway-go.tsv)
@@ -2891,12 +2983,12 @@ Rule for TSV (output/tsv/reactome_pathway-go.tsv)
 Investigating output/tsv/reactome_pathway-go.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:36 +0900
+timestamp: 2023-10-13 19:53:06 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_pathway-iuphar_ligand.tsv)
@@ -2904,12 +2996,12 @@ Rule for TSV (output/tsv/reactome_pathway-iuphar_ligand.tsv)
 Investigating output/tsv/reactome_pathway-iuphar_ligand.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:37 +0900
+timestamp: 2023-10-13 19:53:06 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_pathway-mirbase.tsv)
@@ -2917,12 +3009,12 @@ Rule for TSV (output/tsv/reactome_pathway-mirbase.tsv)
 Investigating output/tsv/reactome_pathway-mirbase.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:37 +0900
+timestamp: 2023-10-13 19:53:06 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_pathway-reactome_reaction.tsv)
@@ -2930,12 +3022,12 @@ Rule for TSV (output/tsv/reactome_pathway-reactome_reaction.tsv)
 Investigating output/tsv/reactome_pathway-reactome_reaction.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:38 +0900
+timestamp: 2023-10-13 19:53:07 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_pathway-uniprot.tsv)
@@ -2943,12 +3035,12 @@ Rule for TSV (output/tsv/reactome_pathway-uniprot.tsv)
 Investigating output/tsv/reactome_pathway-uniprot.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:40 +0900
+timestamp: 2023-10-13 19:53:09 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_reaction-chebi.tsv)
@@ -2956,12 +3048,12 @@ Rule for TSV (output/tsv/reactome_reaction-chebi.tsv)
 Investigating output/tsv/reactome_reaction-chebi.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:40 +0900
+timestamp: 2023-10-13 19:53:10 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_reaction-go.tsv)
@@ -2969,12 +3061,12 @@ Rule for TSV (output/tsv/reactome_reaction-go.tsv)
 Investigating output/tsv/reactome_reaction-go.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:41 +0900
+timestamp: 2023-10-13 19:53:10 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_reaction-iuphar_ligand.tsv)
@@ -2982,12 +3074,12 @@ Rule for TSV (output/tsv/reactome_reaction-iuphar_ligand.tsv)
 Investigating output/tsv/reactome_reaction-iuphar_ligand.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:41 +0900
+timestamp: 2023-10-13 19:53:10 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_reaction-mirbase.tsv)
@@ -2995,12 +3087,12 @@ Rule for TSV (output/tsv/reactome_reaction-mirbase.tsv)
 Investigating output/tsv/reactome_reaction-mirbase.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:41 +0900
+timestamp: 2023-10-13 19:53:10 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/reactome_reaction-uniprot.tsv)
@@ -3008,12 +3100,12 @@ Rule for TSV (output/tsv/reactome_reaction-uniprot.tsv)
 Investigating output/tsv/reactome_reaction-uniprot.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:44:42 +0900
+timestamp: 2023-10-13 19:53:12 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:reactome (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:reactome (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_protein-uniprot.tsv)
@@ -3021,12 +3113,12 @@ Rule for TSV (output/tsv/refseq_protein-uniprot.tsv)
 Investigating output/tsv/refseq_protein-uniprot.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:52:24 +0900
+timestamp: 2023-10-13 19:58:20 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_protein (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_protein (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_rna-dbsnp.tsv)
@@ -3037,9 +3129,9 @@ task needed: true
 timestamp: 2023-09-17 20:10:45 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_rna (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_rna (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_rna-hgnc.tsv)
@@ -3050,9 +3142,9 @@ task needed: true
 timestamp: 2023-09-17 20:12:32 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_rna (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_rna (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_rna-ncbigene.tsv)
@@ -3063,9 +3155,9 @@ task needed: true
 timestamp: 2023-09-17 20:15:32 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_rna (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_rna (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_rna-omim_gene.tsv)
@@ -3076,9 +3168,9 @@ task needed: true
 timestamp: 2023-09-17 20:17:05 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_rna (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_rna (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_rna-pubmed.tsv)
@@ -3089,9 +3181,9 @@ task needed: true
 timestamp: 2023-09-17 20:18:50 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_rna (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_rna (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_rna-refseq_protein.tsv)
@@ -3102,9 +3194,9 @@ task needed: true
 timestamp: 2023-09-17 20:21:34 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_rna (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_rna (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/refseq_rna-taxonomy.tsv)
@@ -3115,9 +3207,9 @@ task needed: true
 timestamp: 2023-09-17 20:24:11 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:refseq_rna (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:refseq_rna (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/rhea-chebi.tsv)
@@ -3128,9 +3220,9 @@ task needed: true
 timestamp: 2023-09-17 20:24:12 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:rhea (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:rhea (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/rhea-ec.tsv)
@@ -3141,9 +3233,9 @@ task needed: true
 timestamp: 2023-09-17 20:24:13 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:rhea (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:rhea (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/rhea-go.tsv)
@@ -3154,9 +3246,9 @@ task needed: true
 timestamp: 2023-09-17 20:24:14 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:rhea (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:rhea (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/rhea-pubmed.tsv)
@@ -3167,9 +3259,9 @@ task needed: true
 timestamp: 2023-09-17 20:24:15 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:rhea (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:rhea (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/rhea-reactome_reaction.tsv)
@@ -3180,9 +3272,9 @@ task needed: true
 timestamp: 2023-09-17 20:24:15 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:rhea (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:rhea (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/rhea-uniprot.tsv)
@@ -3193,9 +3285,9 @@ task needed: true
 timestamp: 2023-09-17 20:24:49 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:rhea (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:rhea (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_accession-bioproject.tsv)
@@ -3203,12 +3295,12 @@ Rule for TSV (output/tsv/sra_accession-bioproject.tsv)
 Investigating output/tsv/sra_accession-bioproject.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 19:53:35 +0900
+timestamp: 2023-10-13 19:59:28 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_accession-biosample.tsv)
@@ -3216,12 +3308,12 @@ Rule for TSV (output/tsv/sra_accession-biosample.tsv)
 Investigating output/tsv/sra_accession-biosample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:00:14 +0900
+timestamp: 2023-10-13 20:06:17 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_accession-sra_analysis.tsv)
@@ -3229,12 +3321,12 @@ Rule for TSV (output/tsv/sra_accession-sra_analysis.tsv)
 Investigating output/tsv/sra_accession-sra_analysis.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:01:11 +0900
+timestamp: 2023-10-13 20:07:17 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_accession-sra_experiment.tsv)
@@ -3242,12 +3334,12 @@ Rule for TSV (output/tsv/sra_accession-sra_experiment.tsv)
 Investigating output/tsv/sra_accession-sra_experiment.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:06:58 +0900
+timestamp: 2023-10-13 20:12:58 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_accession-sra_project.tsv)
@@ -3255,12 +3347,12 @@ Rule for TSV (output/tsv/sra_accession-sra_project.tsv)
 Investigating output/tsv/sra_accession-sra_project.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:07:54 +0900
+timestamp: 2023-10-13 20:13:58 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_accession-sra_run.tsv)
@@ -3268,12 +3360,12 @@ Rule for TSV (output/tsv/sra_accession-sra_run.tsv)
 Investigating output/tsv/sra_accession-sra_run.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:14:34 +0900
+timestamp: 2023-10-13 20:20:26 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_accession-sra_sample.tsv)
@@ -3281,12 +3373,12 @@ Rule for TSV (output/tsv/sra_accession-sra_sample.tsv)
 Investigating output/tsv/sra_accession-sra_sample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:20:11 +0900
+timestamp: 2023-10-13 20:26:01 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_experiment-bioproject.tsv)
@@ -3294,12 +3386,12 @@ Rule for TSV (output/tsv/sra_experiment-bioproject.tsv)
 Investigating output/tsv/sra_experiment-bioproject.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:23:20 +0900
+timestamp: 2023-10-13 20:29:04 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_experiment-biosample.tsv)
@@ -3307,12 +3399,12 @@ Rule for TSV (output/tsv/sra_experiment-biosample.tsv)
 Investigating output/tsv/sra_experiment-biosample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:26:14 +0900
+timestamp: 2023-10-13 20:32:01 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_experiment-sra_project.tsv)
@@ -3320,12 +3412,12 @@ Rule for TSV (output/tsv/sra_experiment-sra_project.tsv)
 Investigating output/tsv/sra_experiment-sra_project.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:28:42 +0900
+timestamp: 2023-10-13 20:34:32 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_experiment-sra_sample.tsv)
@@ -3333,12 +3425,12 @@ Rule for TSV (output/tsv/sra_experiment-sra_sample.tsv)
 Investigating output/tsv/sra_experiment-sra_sample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:31:17 +0900
+timestamp: 2023-10-13 20:37:05 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_project-bioproject.tsv)
@@ -3346,12 +3438,12 @@ Rule for TSV (output/tsv/sra_project-bioproject.tsv)
 Investigating output/tsv/sra_project-bioproject.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:32:14 +0900
+timestamp: 2023-10-13 20:38:04 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_run-bioproject.tsv)
@@ -3359,12 +3451,12 @@ Rule for TSV (output/tsv/sra_run-bioproject.tsv)
 Investigating output/tsv/sra_run-bioproject.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:35:53 +0900
+timestamp: 2023-10-13 20:41:34 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_run-biosample.tsv)
@@ -3372,12 +3464,12 @@ Rule for TSV (output/tsv/sra_run-biosample.tsv)
 Investigating output/tsv/sra_run-biosample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:39:18 +0900
+timestamp: 2023-10-13 20:44:58 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_run-sra_experiment.tsv)
@@ -3385,12 +3477,12 @@ Rule for TSV (output/tsv/sra_run-sra_experiment.tsv)
 Investigating output/tsv/sra_run-sra_experiment.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:42:07 +0900
+timestamp: 2023-10-13 20:47:46 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_run-sra_project.tsv)
@@ -3398,12 +3490,12 @@ Rule for TSV (output/tsv/sra_run-sra_project.tsv)
 Investigating output/tsv/sra_run-sra_project.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:45:01 +0900
+timestamp: 2023-10-13 20:50:44 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_run-sra_sample.tsv)
@@ -3411,12 +3503,12 @@ Rule for TSV (output/tsv/sra_run-sra_sample.tsv)
 Investigating output/tsv/sra_run-sra_sample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:47:49 +0900
+timestamp: 2023-10-13 20:53:34 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/sra_sample-biosample.tsv)
@@ -3424,12 +3516,12 @@ Rule for TSV (output/tsv/sra_sample-biosample.tsv)
 Investigating output/tsv/sra_sample-biosample.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:50:31 +0900
+timestamp: 2023-10-13 20:56:13 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:sra (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:sra (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/swisslipids-chebi.tsv)
@@ -3437,12 +3529,12 @@ Rule for TSV (output/tsv/swisslipids-chebi.tsv)
 Investigating output/tsv/swisslipids-chebi.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:50:45 +0900
+timestamp: 2023-10-13 20:56:27 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:swisslipids (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:swisslipids (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/swisslipids-hmdb.tsv)
@@ -3450,12 +3542,12 @@ Rule for TSV (output/tsv/swisslipids-hmdb.tsv)
 Investigating output/tsv/swisslipids-hmdb.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:51:00 +0900
+timestamp: 2023-10-13 20:56:41 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:swisslipids (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:swisslipids (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/swisslipids-inchi_key.tsv)
@@ -3463,12 +3555,12 @@ Rule for TSV (output/tsv/swisslipids-inchi_key.tsv)
 Investigating output/tsv/swisslipids-inchi_key.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:51:12 +0900
+timestamp: 2023-10-13 20:56:54 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:swisslipids (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:swisslipids (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/taxonomy-pubmed.tsv)
@@ -3476,12 +3568,12 @@ Rule for TSV (output/tsv/taxonomy-pubmed.tsv)
 Investigating output/tsv/taxonomy-pubmed.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:51:13 +0900
+timestamp: 2023-10-13 20:56:55 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:taxonomy (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:taxonomy (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-chembl_target.tsv)
@@ -3492,9 +3584,9 @@ task needed: true
 timestamp: 2023-09-17 22:13:03 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-dbsnp.tsv)
@@ -3505,9 +3597,9 @@ task needed: true
 timestamp: 2023-09-17 22:13:29 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-ec.tsv)
@@ -3518,9 +3610,9 @@ task needed: true
 timestamp: 2023-09-17 22:49:46 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-ensembl_gene.tsv)
@@ -3531,9 +3623,9 @@ task needed: true
 timestamp: 2023-09-17 23:39:37 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-ensembl_protein.tsv)
@@ -3544,9 +3636,9 @@ task needed: true
 timestamp: 2023-09-18 00:29:16 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-ensembl_transcript.tsv)
@@ -3557,9 +3649,9 @@ task needed: true
 timestamp: 2023-09-18 01:18:06 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-go.tsv)
@@ -3570,9 +3662,9 @@ task needed: true
 timestamp: 2023-09-18 01:35:33 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-hgnc.tsv)
@@ -3583,9 +3675,9 @@ task needed: true
 timestamp: 2023-09-18 02:15:22 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-insdc.tsv)
@@ -3596,9 +3688,9 @@ task needed: true
 timestamp: 2023-09-18 03:04:35 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-intact.tsv)
@@ -3609,9 +3701,9 @@ task needed: true
 timestamp: 2023-09-18 03:05:46 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-ncbigene.tsv)
@@ -3622,9 +3714,9 @@ task needed: true
 timestamp: 2023-09-18 03:46:11 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-oma_group.tsv)
@@ -3635,9 +3727,9 @@ task needed: true
 timestamp: 2023-09-18 04:27:24 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-omim_gene.tsv)
@@ -3648,9 +3740,9 @@ task needed: true
 timestamp: 2023-09-18 04:27:31 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-omim_phenotype.tsv)
@@ -3661,9 +3753,9 @@ task needed: true
 timestamp: 2023-09-18 04:27:35 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-orphanet_phenotype.tsv)
@@ -3674,9 +3766,9 @@ task needed: true
 timestamp: 2023-09-23 02:32:28 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-pdb.tsv)
@@ -3687,9 +3779,9 @@ task needed: true
 timestamp: 2023-09-18 05:56:53 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-reactome_pathway.tsv)
@@ -3700,9 +3792,9 @@ task needed: true
 timestamp: 2023-09-18 06:55:18 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-refseq_protein.tsv)
@@ -3713,9 +3805,9 @@ task needed: true
 timestamp: 2023-09-18 07:43:03 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot-uniprot_mnemonic.tsv)
@@ -3726,9 +3818,9 @@ task needed: true
 timestamp: 2023-09-18 08:41:40 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_insdc.tsv)
@@ -3736,12 +3828,12 @@ Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_insdc.tsv)
 Investigating output/tsv/uniprot_reference_proteome-assembly_insdc.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:57:22 +0900
+timestamp: 2023-10-13 21:04:00 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_refseq.tsv)
@@ -3749,12 +3841,12 @@ Rule for TSV (output/tsv/uniprot_reference_proteome-assembly_refseq.tsv)
 Investigating output/tsv/uniprot_reference_proteome-assembly_refseq.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:57:22 +0900
+timestamp: 2023-10-13 21:04:00 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 Rule for TSV (output/tsv/uniprot_reference_proteome-taxonomy.tsv)
@@ -3762,191 +3854,185 @@ Rule for TSV (output/tsv/uniprot_reference_proteome-taxonomy.tsv)
 Investigating output/tsv/uniprot_reference_proteome-taxonomy.tsv
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:57:23 +0900
+timestamp: 2023-10-13 21:04:00 +0900
 pre-requisites: 
 --output/tsv/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---prepare:uniprot (2023-10-06 20:57:42 +0900)
-latest-prerequisite time: 2023-10-06 20:57:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--prepare:uniprot (2023-10-13 21:04:19 +0900)
+latest-prerequisite time: 2023-10-13 21:04:19 +0900
 ................................
 
 ### Update TTL for affy_probeset-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/affy_probeset-ncbigene.ttl is older than output/tsv/affy_probeset-ncbigene.tsv
 ## Convert output/tsv/affy_probeset-ncbigene.tsv => output/ttl/affy_probeset-ncbigene.ttl
-< 2023-10-06T20:57:42 affy_probeset-ncbigene
+< 2023-10-13T21:04:19 affy_probeset-ncbigene
 togoid-config config/affy_probeset-ncbigene convert
-> 2023-10-06T20:57:43 affy_probeset-ncbigene
+> 2023-10-13T21:04:19 affy_probeset-ncbigene
 ### Update TTL for assembly_insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/assembly_insdc-bioproject.ttl is older than output/tsv/assembly_insdc-bioproject.tsv
 ## Convert output/tsv/assembly_insdc-bioproject.tsv => output/ttl/assembly_insdc-bioproject.ttl
-< 2023-10-06T20:57:43 assembly_insdc-bioproject
+< 2023-10-13T21:04:19 assembly_insdc-bioproject
 togoid-config config/assembly_insdc-bioproject convert
-> 2023-10-06T20:57:58 assembly_insdc-bioproject
+> 2023-10-13T21:04:34 assembly_insdc-bioproject
 ### Update TTL for assembly_insdc-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/assembly_insdc-biosample.ttl is older than output/tsv/assembly_insdc-biosample.tsv
 ## Convert output/tsv/assembly_insdc-biosample.tsv => output/ttl/assembly_insdc-biosample.ttl
-< 2023-10-06T20:57:58 assembly_insdc-biosample
+< 2023-10-13T21:04:34 assembly_insdc-biosample
 togoid-config config/assembly_insdc-biosample convert
-> 2023-10-06T20:58:13 assembly_insdc-biosample
+> 2023-10-13T21:04:50 assembly_insdc-biosample
 ### Update TTL for assembly_insdc-insdc_master if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/assembly_insdc-insdc_master.ttl is older than output/tsv/assembly_insdc-insdc_master.tsv
 ## Convert output/tsv/assembly_insdc-insdc_master.tsv => output/ttl/assembly_insdc-insdc_master.ttl
-< 2023-10-06T20:58:13 assembly_insdc-insdc_master
+< 2023-10-13T21:04:50 assembly_insdc-insdc_master
 togoid-config config/assembly_insdc-insdc_master convert
-> 2023-10-06T20:58:28 assembly_insdc-insdc_master
+> 2023-10-13T21:05:05 assembly_insdc-insdc_master
 ### Update TTL for bioproject-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/bioproject-biosample.ttl is older than output/tsv/bioproject-biosample.tsv
 ## Convert output/tsv/bioproject-biosample.tsv => output/ttl/bioproject-biosample.ttl
-< 2023-10-06T20:58:28 bioproject-biosample
+< 2023-10-13T21:05:05 bioproject-biosample
 togoid-config config/bioproject-biosample convert
-> 2023-10-06T20:58:47 bioproject-biosample
+> 2023-10-13T21:05:24 bioproject-biosample
 ### Update TTL for bioproject-geo_series if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/bioproject-geo_series.ttl is older than output/tsv/bioproject-geo_series.tsv
 ## Convert output/tsv/bioproject-geo_series.tsv => output/ttl/bioproject-geo_series.ttl
-< 2023-10-06T20:58:47 bioproject-geo_series
+< 2023-10-13T21:05:24 bioproject-geo_series
 togoid-config config/bioproject-geo_series convert
-> 2023-10-06T20:58:49 bioproject-geo_series
+> 2023-10-13T21:05:26 bioproject-geo_series
 ### Update TTL for bioproject-pubmed if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/bioproject-pubmed.ttl is older than output/tsv/bioproject-pubmed.tsv
 ## Convert output/tsv/bioproject-pubmed.tsv => output/ttl/bioproject-pubmed.ttl
-< 2023-10-06T20:58:49 bioproject-pubmed
+< 2023-10-13T21:05:26 bioproject-pubmed
 togoid-config config/bioproject-pubmed convert
-> 2023-10-06T20:58:51 bioproject-pubmed
+> 2023-10-13T21:05:28 bioproject-pubmed
 ### Update TTL for bioproject_umbrella-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/bioproject_umbrella-bioproject.ttl is older than output/tsv/bioproject_umbrella-bioproject.tsv
 ## Convert output/tsv/bioproject_umbrella-bioproject.tsv => output/ttl/bioproject_umbrella-bioproject.ttl
-< 2023-10-06T20:58:51 bioproject_umbrella-bioproject
+< 2023-10-13T21:05:28 bioproject_umbrella-bioproject
 togoid-config config/bioproject_umbrella-bioproject convert
-> 2023-10-06T20:58:52 bioproject_umbrella-bioproject
+> 2023-10-13T21:05:29 bioproject_umbrella-bioproject
 ### Update TTL for biosample-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/biosample-bioproject.ttl is older than output/tsv/biosample-bioproject.tsv
 ## Convert output/tsv/biosample-bioproject.tsv => output/ttl/biosample-bioproject.ttl
-< 2023-10-06T20:58:52 biosample-bioproject
+< 2023-10-13T21:05:29 biosample-bioproject
 togoid-config config/biosample-bioproject convert
-> 2023-10-06T20:59:10 biosample-bioproject
-### Update TTL for cellosaurus-ncit_disease if check_ttl_filesize false or check_ttl_timestamp true
-# File output/ttl/cellosaurus-ncit_disease.ttl is older than output/tsv/cellosaurus-ncit_disease.tsv
-## Convert output/tsv/cellosaurus-ncit_disease.tsv => output/ttl/cellosaurus-ncit_disease.ttl
-< 2023-10-06T20:59:10 cellosaurus-ncit_disease
-togoid-config config/cellosaurus-ncit_disease convert
-> 2023-10-06T20:59:11 cellosaurus-ncit_disease
-### Update TTL for cellosaurus-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true
-# File output/ttl/cellosaurus-orphanet_phenotype.ttl is older than output/tsv/cellosaurus-orphanet_phenotype.tsv
-## Convert output/tsv/cellosaurus-orphanet_phenotype.tsv => output/ttl/cellosaurus-orphanet_phenotype.ttl
-< 2023-10-06T20:59:11 cellosaurus-orphanet_phenotype
-togoid-config config/cellosaurus-orphanet_phenotype convert
-> 2023-10-06T20:59:12 cellosaurus-orphanet_phenotype
+> 2023-10-13T21:05:47 biosample-bioproject
+### Update TTL for cellosaurus-ncit_disease if check_ttl_filesize false or check_ttl_timestamp false
+# File output/ttl/cellosaurus-ncit_disease.ttl is newer than output/tsv/cellosaurus-ncit_disease.tsv
+# => Preserving output/ttl/cellosaurus-ncit_disease.ttl
+### Update TTL for cellosaurus-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false
+# File output/ttl/cellosaurus-orphanet_phenotype.ttl is newer than output/tsv/cellosaurus-orphanet_phenotype.tsv
+# => Preserving output/ttl/cellosaurus-orphanet_phenotype.ttl
 ### Update TTL for chebi-inchi_key if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chebi-inchi_key.ttl is older than output/tsv/chebi-inchi_key.tsv
 ## Convert output/tsv/chebi-inchi_key.tsv => output/ttl/chebi-inchi_key.ttl
-< 2023-10-06T20:59:12 chebi-inchi_key
+< 2023-10-13T21:05:47 chebi-inchi_key
 togoid-config config/chebi-inchi_key convert
-> 2023-10-06T20:59:13 chebi-inchi_key
+> 2023-10-13T21:05:48 chebi-inchi_key
 ### Update TTL for chembl_compound-chebi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-chebi.ttl is older than output/tsv/chembl_compound-chebi.tsv
 ## Convert output/tsv/chembl_compound-chebi.tsv => output/ttl/chembl_compound-chebi.ttl
-< 2023-10-06T20:59:13 chembl_compound-chebi
+< 2023-10-13T21:05:48 chembl_compound-chebi
 togoid-config config/chembl_compound-chebi convert
-> 2023-10-06T20:59:14 chembl_compound-chebi
+> 2023-10-13T21:05:49 chembl_compound-chebi
 ### Update TTL for chembl_compound-chembl_target if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-chembl_target.ttl is older than output/tsv/chembl_compound-chembl_target.tsv
 ## Convert output/tsv/chembl_compound-chembl_target.tsv => output/ttl/chembl_compound-chembl_target.ttl
-< 2023-10-06T20:59:14 chembl_compound-chembl_target
+< 2023-10-13T21:05:49 chembl_compound-chembl_target
 togoid-config config/chembl_compound-chembl_target convert
-> 2023-10-06T20:59:41 chembl_compound-chembl_target
+> 2023-10-13T21:06:16 chembl_compound-chembl_target
 ### Update TTL for chembl_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-drugbank.ttl is older than output/tsv/chembl_compound-drugbank.tsv
 ## Convert output/tsv/chembl_compound-drugbank.tsv => output/ttl/chembl_compound-drugbank.ttl
-< 2023-10-06T20:59:41 chembl_compound-drugbank
+< 2023-10-13T21:06:16 chembl_compound-drugbank
 togoid-config config/chembl_compound-drugbank convert
-> 2023-10-06T20:59:41 chembl_compound-drugbank
+> 2023-10-13T21:06:17 chembl_compound-drugbank
 ### Update TTL for chembl_compound-hmdb if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-hmdb.ttl is older than output/tsv/chembl_compound-hmdb.tsv
 ## Convert output/tsv/chembl_compound-hmdb.tsv => output/ttl/chembl_compound-hmdb.ttl
-< 2023-10-06T20:59:41 chembl_compound-hmdb
+< 2023-10-13T21:06:17 chembl_compound-hmdb
 togoid-config config/chembl_compound-hmdb convert
-> 2023-10-06T20:59:41 chembl_compound-hmdb
+> 2023-10-13T21:06:17 chembl_compound-hmdb
 ### Update TTL for chembl_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-inchi_key.ttl is older than output/tsv/chembl_compound-inchi_key.tsv
 ## Convert output/tsv/chembl_compound-inchi_key.tsv => output/ttl/chembl_compound-inchi_key.ttl
-< 2023-10-06T20:59:41 chembl_compound-inchi_key
+< 2023-10-13T21:06:17 chembl_compound-inchi_key
 togoid-config config/chembl_compound-inchi_key convert
-> 2023-10-06T20:59:59 chembl_compound-inchi_key
+> 2023-10-13T21:06:36 chembl_compound-inchi_key
 ### Update TTL for chembl_compound-mesh if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-mesh.ttl is older than output/tsv/chembl_compound-mesh.tsv
 ## Convert output/tsv/chembl_compound-mesh.tsv => output/ttl/chembl_compound-mesh.ttl
-< 2023-10-06T20:59:59 chembl_compound-mesh
+< 2023-10-13T21:06:36 chembl_compound-mesh
 togoid-config config/chembl_compound-mesh convert
-> 2023-10-06T21:00:00 chembl_compound-mesh
+> 2023-10-13T21:06:36 chembl_compound-mesh
 ### Update TTL for chembl_compound-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-pdb_ccd.ttl is older than output/tsv/chembl_compound-pdb_ccd.tsv
 ## Convert output/tsv/chembl_compound-pdb_ccd.tsv => output/ttl/chembl_compound-pdb_ccd.ttl
-< 2023-10-06T21:00:00 chembl_compound-pdb_ccd
+< 2023-10-13T21:06:36 chembl_compound-pdb_ccd
 togoid-config config/chembl_compound-pdb_ccd convert
-> 2023-10-06T21:00:00 chembl_compound-pdb_ccd
+> 2023-10-13T21:06:37 chembl_compound-pdb_ccd
 ### Update TTL for chembl_compound-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-pubchem_compound.ttl is older than output/tsv/chembl_compound-pubchem_compound.tsv
 ## Convert output/tsv/chembl_compound-pubchem_compound.tsv => output/ttl/chembl_compound-pubchem_compound.ttl
-< 2023-10-06T21:00:00 chembl_compound-pubchem_compound
+< 2023-10-13T21:06:37 chembl_compound-pubchem_compound
 togoid-config config/chembl_compound-pubchem_compound convert
-> 2023-10-06T21:00:17 chembl_compound-pubchem_compound
+> 2023-10-13T21:06:54 chembl_compound-pubchem_compound
 ### Update TTL for chembl_compound-pubchem_substance if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-pubchem_substance.ttl is older than output/tsv/chembl_compound-pubchem_substance.tsv
 ## Convert output/tsv/chembl_compound-pubchem_substance.tsv => output/ttl/chembl_compound-pubchem_substance.ttl
-< 2023-10-06T21:00:17 chembl_compound-pubchem_substance
+< 2023-10-13T21:06:54 chembl_compound-pubchem_substance
 togoid-config config/chembl_compound-pubchem_substance convert
-> 2023-10-06T21:00:20 chembl_compound-pubchem_substance
+> 2023-10-13T21:06:58 chembl_compound-pubchem_substance
 ### Update TTL for chembl_compound-pubmed if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_compound-pubmed.ttl is older than output/tsv/chembl_compound-pubmed.tsv
 ## Convert output/tsv/chembl_compound-pubmed.tsv => output/ttl/chembl_compound-pubmed.ttl
-< 2023-10-06T21:00:20 chembl_compound-pubmed
+< 2023-10-13T21:06:58 chembl_compound-pubmed
 togoid-config config/chembl_compound-pubmed convert
-> 2023-10-06T21:00:32 chembl_compound-pubmed
+> 2023-10-13T21:07:10 chembl_compound-pubmed
 ### Update TTL for chembl_target-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/chembl_target-ensembl_gene.ttl is newer than output/tsv/chembl_target-ensembl_gene.tsv
 # => Preserving output/ttl/chembl_target-ensembl_gene.ttl
 ### Update TTL for chembl_target-go if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_target-go.ttl is older than output/tsv/chembl_target-go.tsv
 ## Convert output/tsv/chembl_target-go.tsv => output/ttl/chembl_target-go.ttl
-< 2023-10-06T21:00:32 chembl_target-go
+< 2023-10-13T21:07:10 chembl_target-go
 togoid-config config/chembl_target-go convert
-> 2023-10-06T21:00:32 chembl_target-go
+> 2023-10-13T21:07:10 chembl_target-go
 ### Update TTL for chembl_target-interpro if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_target-interpro.ttl is older than output/tsv/chembl_target-interpro.tsv
 ## Convert output/tsv/chembl_target-interpro.tsv => output/ttl/chembl_target-interpro.ttl
-< 2023-10-06T21:00:32 chembl_target-interpro
+< 2023-10-13T21:07:10 chembl_target-interpro
 togoid-config config/chembl_target-interpro convert
-> 2023-10-06T21:00:32 chembl_target-interpro
+> 2023-10-13T21:07:10 chembl_target-interpro
 ### Update TTL for chembl_target-pdb if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_target-pdb.ttl is older than output/tsv/chembl_target-pdb.tsv
 ## Convert output/tsv/chembl_target-pdb.tsv => output/ttl/chembl_target-pdb.ttl
-< 2023-10-06T21:00:32 chembl_target-pdb
+< 2023-10-13T21:07:10 chembl_target-pdb
 togoid-config config/chembl_target-pdb convert
-> 2023-10-06T21:00:33 chembl_target-pdb
+> 2023-10-13T21:07:10 chembl_target-pdb
 ### Update TTL for chembl_target-pfam if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_target-pfam.ttl is older than output/tsv/chembl_target-pfam.tsv
 ## Convert output/tsv/chembl_target-pfam.tsv => output/ttl/chembl_target-pfam.ttl
-< 2023-10-06T21:00:33 chembl_target-pfam
+< 2023-10-13T21:07:10 chembl_target-pfam
 togoid-config config/chembl_target-pfam convert
-> 2023-10-06T21:00:33 chembl_target-pfam
+> 2023-10-13T21:07:11 chembl_target-pfam
 ### Update TTL for chembl_target-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_target-reactome_pathway.ttl is older than output/tsv/chembl_target-reactome_pathway.tsv
 ## Convert output/tsv/chembl_target-reactome_pathway.tsv => output/ttl/chembl_target-reactome_pathway.ttl
-< 2023-10-06T21:00:33 chembl_target-reactome_pathway
+< 2023-10-13T21:07:11 chembl_target-reactome_pathway
 togoid-config config/chembl_target-reactome_pathway convert
-> 2023-10-06T21:00:33 chembl_target-reactome_pathway
+> 2023-10-13T21:07:11 chembl_target-reactome_pathway
 ### Update TTL for chembl_target-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/chembl_target-uniprot.ttl is older than output/tsv/chembl_target-uniprot.tsv
 ## Convert output/tsv/chembl_target-uniprot.tsv => output/ttl/chembl_target-uniprot.ttl
-< 2023-10-06T21:00:33 chembl_target-uniprot
+< 2023-10-13T21:07:11 chembl_target-uniprot
 togoid-config config/chembl_target-uniprot convert
-> 2023-10-06T21:00:34 chembl_target-uniprot
+> 2023-10-13T21:07:11 chembl_target-uniprot
 ### Update TTL for clinvar-medgen if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/clinvar-medgen.ttl is older than output/tsv/clinvar-medgen.tsv
 ## Convert output/tsv/clinvar-medgen.tsv => output/ttl/clinvar-medgen.ttl
-< 2023-10-06T21:00:34 clinvar-medgen
+< 2023-10-13T21:07:11 clinvar-medgen
 togoid-config config/clinvar-medgen convert
-> 2023-10-06T21:00:46 clinvar-medgen
+> 2023-10-13T21:07:23 clinvar-medgen
 ### Update TTL for cog-insdc if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/cog-insdc.ttl is newer than output/tsv/cog-insdc.tsv
 # => Preserving output/ttl/cog-insdc.ttl
@@ -3956,201 +4042,195 @@ togoid-config config/clinvar-medgen convert
 ### Update TTL for doid-mesh if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/doid-mesh.ttl is older than output/tsv/doid-mesh.tsv
 ## Convert output/tsv/doid-mesh.tsv => output/ttl/doid-mesh.ttl
-< 2023-10-06T21:00:46 doid-mesh
+< 2023-10-13T21:07:23 doid-mesh
 togoid-config config/doid-mesh convert
-> 2023-10-06T21:00:46 doid-mesh
+> 2023-10-13T21:07:24 doid-mesh
 ### Update TTL for doid-ncit_disease if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/doid-ncit_disease.ttl is older than output/tsv/doid-ncit_disease.tsv
 ## Convert output/tsv/doid-ncit_disease.tsv => output/ttl/doid-ncit_disease.ttl
-< 2023-10-06T21:00:46 doid-ncit_disease
+< 2023-10-13T21:07:24 doid-ncit_disease
 togoid-config config/doid-ncit_disease convert
-> 2023-10-06T21:00:46 doid-ncit_disease
+> 2023-10-13T21:07:24 doid-ncit_disease
 ### Update TTL for doid-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/doid-omim_phenotype.ttl is older than output/tsv/doid-omim_phenotype.tsv
 ## Convert output/tsv/doid-omim_phenotype.tsv => output/ttl/doid-omim_phenotype.ttl
-< 2023-10-06T21:00:46 doid-omim_phenotype
+< 2023-10-13T21:07:24 doid-omim_phenotype
 togoid-config config/doid-omim_phenotype convert
-> 2023-10-06T21:00:47 doid-omim_phenotype
+> 2023-10-13T21:07:24 doid-omim_phenotype
 ### Update TTL for ensembl_gene-affy_probeset if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_gene-affy_probeset.ttl is older than output/tsv/ensembl_gene-affy_probeset.tsv
 ## Convert output/tsv/ensembl_gene-affy_probeset.tsv => output/ttl/ensembl_gene-affy_probeset.ttl
-< 2023-10-06T21:00:47 ensembl_gene-affy_probeset
+< 2023-10-13T21:07:24 ensembl_gene-affy_probeset
 togoid-config config/ensembl_gene-affy_probeset convert
-> 2023-10-06T21:00:47 ensembl_gene-affy_probeset
+> 2023-10-13T21:07:25 ensembl_gene-affy_probeset
 ### Update TTL for ensembl_gene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_gene-ensembl_protein.ttl is older than output/tsv/ensembl_gene-ensembl_protein.tsv
 ## Convert output/tsv/ensembl_gene-ensembl_protein.tsv => output/ttl/ensembl_gene-ensembl_protein.ttl
-< 2023-10-06T21:00:47 ensembl_gene-ensembl_protein
+< 2023-10-13T21:07:25 ensembl_gene-ensembl_protein
 togoid-config config/ensembl_gene-ensembl_protein convert
-> 2023-10-06T21:02:38 ensembl_gene-ensembl_protein
+> 2023-10-13T21:09:15 ensembl_gene-ensembl_protein
 ### Update TTL for ensembl_gene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_gene-ensembl_transcript.ttl is older than output/tsv/ensembl_gene-ensembl_transcript.tsv
 ## Convert output/tsv/ensembl_gene-ensembl_transcript.tsv => output/ttl/ensembl_gene-ensembl_transcript.ttl
-< 2023-10-06T21:02:38 ensembl_gene-ensembl_transcript
+< 2023-10-13T21:09:15 ensembl_gene-ensembl_transcript
 togoid-config config/ensembl_gene-ensembl_transcript convert
-> 2023-10-06T21:04:55 ensembl_gene-ensembl_transcript
+> 2023-10-13T21:11:30 ensembl_gene-ensembl_transcript
 ### Update TTL for ensembl_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_gene-hgnc.ttl is older than output/tsv/ensembl_gene-hgnc.tsv
 ## Convert output/tsv/ensembl_gene-hgnc.tsv => output/ttl/ensembl_gene-hgnc.ttl
-< 2023-10-06T21:04:55 ensembl_gene-hgnc
+< 2023-10-13T21:11:30 ensembl_gene-hgnc
 togoid-config config/ensembl_gene-hgnc convert
-> 2023-10-06T21:04:56 ensembl_gene-hgnc
+> 2023-10-13T21:11:31 ensembl_gene-hgnc
 ### Update TTL for ensembl_gene-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_gene-ncbigene.ttl is older than output/tsv/ensembl_gene-ncbigene.tsv
 ## Convert output/tsv/ensembl_gene-ncbigene.tsv => output/ttl/ensembl_gene-ncbigene.ttl
-< 2023-10-06T21:04:56 ensembl_gene-ncbigene
+< 2023-10-13T21:11:31 ensembl_gene-ncbigene
 togoid-config config/ensembl_gene-ncbigene convert
-> 2023-10-06T21:05:46 ensembl_gene-ncbigene
+> 2023-10-13T21:12:21 ensembl_gene-ncbigene
 ### Update TTL for ensembl_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_gene-uniprot.ttl is older than output/tsv/ensembl_gene-uniprot.tsv
 ## Convert output/tsv/ensembl_gene-uniprot.tsv => output/ttl/ensembl_gene-uniprot.ttl
-< 2023-10-06T21:05:46 ensembl_gene-uniprot
+< 2023-10-13T21:12:21 ensembl_gene-uniprot
 togoid-config config/ensembl_gene-uniprot convert
-> 2023-10-06T21:06:27 ensembl_gene-uniprot
+> 2023-10-13T21:13:03 ensembl_gene-uniprot
 ### Update TTL for ensembl_protein-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_protein-ensembl_transcript.ttl is older than output/tsv/ensembl_protein-ensembl_transcript.tsv
 ## Convert output/tsv/ensembl_protein-ensembl_transcript.tsv => output/ttl/ensembl_protein-ensembl_transcript.ttl
-< 2023-10-06T21:06:27 ensembl_protein-ensembl_transcript
+< 2023-10-13T21:13:03 ensembl_protein-ensembl_transcript
 togoid-config config/ensembl_protein-ensembl_transcript convert
-> 2023-10-06T21:08:19 ensembl_protein-ensembl_transcript
+> 2023-10-13T21:14:55 ensembl_protein-ensembl_transcript
 ### Update TTL for ensembl_transcript-affy_probeset if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_transcript-affy_probeset.ttl is older than output/tsv/ensembl_transcript-affy_probeset.tsv
 ## Convert output/tsv/ensembl_transcript-affy_probeset.tsv => output/ttl/ensembl_transcript-affy_probeset.ttl
-< 2023-10-06T21:08:19 ensembl_transcript-affy_probeset
+< 2023-10-13T21:14:55 ensembl_transcript-affy_probeset
 togoid-config config/ensembl_transcript-affy_probeset convert
-> 2023-10-06T21:08:21 ensembl_transcript-affy_probeset
+> 2023-10-13T21:14:57 ensembl_transcript-affy_probeset
 ### Update TTL for ensembl_transcript-go if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_transcript-go.ttl is older than output/tsv/ensembl_transcript-go.tsv
 ## Convert output/tsv/ensembl_transcript-go.tsv => output/ttl/ensembl_transcript-go.ttl
-< 2023-10-06T21:08:21 ensembl_transcript-go
+< 2023-10-13T21:14:57 ensembl_transcript-go
 togoid-config config/ensembl_transcript-go convert
-> 2023-10-06T21:19:04 ensembl_transcript-go
+> 2023-10-13T21:25:44 ensembl_transcript-go
 ### Update TTL for ensembl_transcript-hgnc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_transcript-hgnc.ttl is older than output/tsv/ensembl_transcript-hgnc.tsv
 ## Convert output/tsv/ensembl_transcript-hgnc.tsv => output/ttl/ensembl_transcript-hgnc.ttl
-< 2023-10-06T21:19:04 ensembl_transcript-hgnc
+< 2023-10-13T21:25:44 ensembl_transcript-hgnc
 togoid-config config/ensembl_transcript-hgnc convert
-> 2023-10-06T21:19:06 ensembl_transcript-hgnc
+> 2023-10-13T21:25:46 ensembl_transcript-hgnc
 ### Update TTL for ensembl_transcript-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ensembl_transcript-refseq_rna.ttl is older than output/tsv/ensembl_transcript-refseq_rna.tsv
 ## Convert output/tsv/ensembl_transcript-refseq_rna.tsv => output/ttl/ensembl_transcript-refseq_rna.ttl
-< 2023-10-06T21:19:06 ensembl_transcript-refseq_rna
+< 2023-10-13T21:25:46 ensembl_transcript-refseq_rna
 togoid-config config/ensembl_transcript-refseq_rna convert
-> 2023-10-06T21:20:32 ensembl_transcript-refseq_rna
+> 2023-10-13T21:27:16 ensembl_transcript-refseq_rna
 ### Update TTL for gea-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/gea-bioproject.ttl is older than output/tsv/gea-bioproject.tsv
 ## Convert output/tsv/gea-bioproject.tsv => output/ttl/gea-bioproject.ttl
-< 2023-10-06T21:20:32 gea-bioproject
+< 2023-10-13T21:27:16 gea-bioproject
 togoid-config config/gea-bioproject convert
-> 2023-10-06T21:20:33 gea-bioproject
+> 2023-10-13T21:27:16 gea-bioproject
 ### Update TTL for gea-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/gea-biosample.ttl is older than output/tsv/gea-biosample.tsv
 ## Convert output/tsv/gea-biosample.tsv => output/ttl/gea-biosample.ttl
-< 2023-10-06T21:20:33 gea-biosample
+< 2023-10-13T21:27:16 gea-biosample
 togoid-config config/gea-biosample convert
-> 2023-10-06T21:20:33 gea-biosample
+> 2023-10-13T21:27:16 gea-biosample
 ### Update TTL for glytoucan-doid if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/glytoucan-doid.ttl is older than output/tsv/glytoucan-doid.tsv
 ## Convert output/tsv/glytoucan-doid.tsv => output/ttl/glytoucan-doid.ttl
-< 2023-10-06T21:20:33 glytoucan-doid
+< 2023-10-13T21:27:16 glytoucan-doid
 togoid-config config/glytoucan-doid convert
-> 2023-10-06T21:20:33 glytoucan-doid
+> 2023-10-13T21:27:16 glytoucan-doid
 ### Update TTL for glytoucan-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/glytoucan-ncbigene.ttl is older than output/tsv/glytoucan-ncbigene.tsv
 ## Convert output/tsv/glytoucan-ncbigene.tsv => output/ttl/glytoucan-ncbigene.ttl
-< 2023-10-06T21:20:33 glytoucan-ncbigene
+< 2023-10-13T21:27:17 glytoucan-ncbigene
 togoid-config config/glytoucan-ncbigene convert
-> 2023-10-06T21:20:33 glytoucan-ncbigene
+> 2023-10-13T21:27:17 glytoucan-ncbigene
 ### Update TTL for glytoucan-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/glytoucan-uniprot.ttl is older than output/tsv/glytoucan-uniprot.tsv
 ## Convert output/tsv/glytoucan-uniprot.tsv => output/ttl/glytoucan-uniprot.ttl
-< 2023-10-06T21:20:33 glytoucan-uniprot
+< 2023-10-13T21:27:17 glytoucan-uniprot
 togoid-config config/glytoucan-uniprot convert
-> 2023-10-06T21:20:34 glytoucan-uniprot
-### Update TTL for hgnc-ccds if check_ttl_filesize false or check_ttl_timestamp true
-# File output/ttl/hgnc-ccds.ttl is older than output/tsv/hgnc-ccds.tsv
-## Convert output/tsv/hgnc-ccds.tsv => output/ttl/hgnc-ccds.ttl
-< 2023-10-06T21:20:34 hgnc-ccds
-togoid-config config/hgnc-ccds convert
-> 2023-10-06T21:20:34 hgnc-ccds
+> 2023-10-13T21:27:17 glytoucan-uniprot
+### Update TTL for hgnc-ccds if check_ttl_filesize false or check_ttl_timestamp false
+# File output/ttl/hgnc-ccds.ttl is newer than output/tsv/hgnc-ccds.tsv
+# => Preserving output/ttl/hgnc-ccds.ttl
 ### Update TTL for hgnc-ec if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-ec.ttl is older than output/tsv/hgnc-ec.tsv
 ## Convert output/tsv/hgnc-ec.tsv => output/ttl/hgnc-ec.ttl
-< 2023-10-06T21:20:34 hgnc-ec
+< 2023-10-13T21:27:17 hgnc-ec
 togoid-config config/hgnc-ec convert
-> 2023-10-06T21:20:35 hgnc-ec
+> 2023-10-13T21:27:18 hgnc-ec
 ### Update TTL for hgnc-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-ensembl_gene.ttl is older than output/tsv/hgnc-ensembl_gene.tsv
 ## Convert output/tsv/hgnc-ensembl_gene.tsv => output/ttl/hgnc-ensembl_gene.ttl
-< 2023-10-06T21:20:35 hgnc-ensembl_gene
+< 2023-10-13T21:27:18 hgnc-ensembl_gene
 togoid-config config/hgnc-ensembl_gene convert
-> 2023-10-06T21:20:35 hgnc-ensembl_gene
+> 2023-10-13T21:27:18 hgnc-ensembl_gene
 ### Update TTL for hgnc-hgnc_symbol if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-hgnc_symbol.ttl is older than output/tsv/hgnc-hgnc_symbol.tsv
 ## Convert output/tsv/hgnc-hgnc_symbol.tsv => output/ttl/hgnc-hgnc_symbol.ttl
-< 2023-10-06T21:20:35 hgnc-hgnc_symbol
+< 2023-10-13T21:27:18 hgnc-hgnc_symbol
 togoid-config config/hgnc-hgnc_symbol convert
-> 2023-10-06T21:20:36 hgnc-hgnc_symbol
+> 2023-10-13T21:27:19 hgnc-hgnc_symbol
 ### Update TTL for hgnc-insdc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-insdc.ttl is older than output/tsv/hgnc-insdc.tsv
 ## Convert output/tsv/hgnc-insdc.tsv => output/ttl/hgnc-insdc.ttl
-< 2023-10-06T21:20:36 hgnc-insdc
+< 2023-10-13T21:27:19 hgnc-insdc
 togoid-config config/hgnc-insdc convert
-> 2023-10-06T21:20:36 hgnc-insdc
+> 2023-10-13T21:27:19 hgnc-insdc
 ### Update TTL for hgnc-lrg if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-lrg.ttl is older than output/tsv/hgnc-lrg.tsv
 ## Convert output/tsv/hgnc-lrg.tsv => output/ttl/hgnc-lrg.ttl
-< 2023-10-06T21:20:36 hgnc-lrg
+< 2023-10-13T21:27:19 hgnc-lrg
 togoid-config config/hgnc-lrg convert
-> 2023-10-06T21:20:36 hgnc-lrg
+> 2023-10-13T21:27:19 hgnc-lrg
 ### Update TTL for hgnc-mgi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-mgi.ttl is older than output/tsv/hgnc-mgi.tsv
 ## Convert output/tsv/hgnc-mgi.tsv => output/ttl/hgnc-mgi.ttl
-< 2023-10-06T21:20:36 hgnc-mgi
+< 2023-10-13T21:27:19 hgnc-mgi
 togoid-config config/hgnc-mgi convert
-> 2023-10-06T21:20:37 hgnc-mgi
+> 2023-10-13T21:27:20 hgnc-mgi
 ### Update TTL for hgnc-mirbase if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-mirbase.ttl is older than output/tsv/hgnc-mirbase.tsv
 ## Convert output/tsv/hgnc-mirbase.tsv => output/ttl/hgnc-mirbase.ttl
-< 2023-10-06T21:20:37 hgnc-mirbase
+< 2023-10-13T21:27:20 hgnc-mirbase
 togoid-config config/hgnc-mirbase convert
-> 2023-10-06T21:20:37 hgnc-mirbase
+> 2023-10-13T21:27:20 hgnc-mirbase
 ### Update TTL for hgnc-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-ncbigene.ttl is older than output/tsv/hgnc-ncbigene.tsv
 ## Convert output/tsv/hgnc-ncbigene.tsv => output/ttl/hgnc-ncbigene.ttl
-< 2023-10-06T21:20:37 hgnc-ncbigene
+< 2023-10-13T21:27:20 hgnc-ncbigene
 togoid-config config/hgnc-ncbigene convert
-> 2023-10-06T21:20:38 hgnc-ncbigene
+> 2023-10-13T21:27:20 hgnc-ncbigene
 ### Update TTL for hgnc-omim_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-omim_gene.ttl is older than output/tsv/hgnc-omim_gene.tsv
 ## Convert output/tsv/hgnc-omim_gene.tsv => output/ttl/hgnc-omim_gene.ttl
-< 2023-10-06T21:20:38 hgnc-omim_gene
+< 2023-10-13T21:27:20 hgnc-omim_gene
 togoid-config config/hgnc-omim_gene convert
-> 2023-10-06T21:20:38 hgnc-omim_gene
-### Update TTL for hgnc-pubmed if check_ttl_filesize false or check_ttl_timestamp true
-# File output/ttl/hgnc-pubmed.ttl is older than output/tsv/hgnc-pubmed.tsv
-## Convert output/tsv/hgnc-pubmed.tsv => output/ttl/hgnc-pubmed.ttl
-< 2023-10-06T21:20:38 hgnc-pubmed
-togoid-config config/hgnc-pubmed convert
-> 2023-10-06T21:20:38 hgnc-pubmed
+> 2023-10-13T21:27:21 hgnc-omim_gene
+### Update TTL for hgnc-pubmed if check_ttl_filesize false or check_ttl_timestamp false
+# File output/ttl/hgnc-pubmed.ttl is newer than output/tsv/hgnc-pubmed.tsv
+# => Preserving output/ttl/hgnc-pubmed.ttl
 ### Update TTL for hgnc-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-refseq_rna.ttl is older than output/tsv/hgnc-refseq_rna.tsv
 ## Convert output/tsv/hgnc-refseq_rna.tsv => output/ttl/hgnc-refseq_rna.ttl
-< 2023-10-06T21:20:38 hgnc-refseq_rna
+< 2023-10-13T21:27:21 hgnc-refseq_rna
 togoid-config config/hgnc-refseq_rna convert
-> 2023-10-06T21:20:39 hgnc-refseq_rna
+> 2023-10-13T21:27:21 hgnc-refseq_rna
 ### Update TTL for hgnc-rgd if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-rgd.ttl is older than output/tsv/hgnc-rgd.tsv
 ## Convert output/tsv/hgnc-rgd.tsv => output/ttl/hgnc-rgd.ttl
-< 2023-10-06T21:20:39 hgnc-rgd
+< 2023-10-13T21:27:21 hgnc-rgd
 togoid-config config/hgnc-rgd convert
-> 2023-10-06T21:20:39 hgnc-rgd
+> 2023-10-13T21:27:22 hgnc-rgd
 ### Update TTL for hgnc-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/hgnc-uniprot.ttl is older than output/tsv/hgnc-uniprot.tsv
 ## Convert output/tsv/hgnc-uniprot.tsv => output/ttl/hgnc-uniprot.ttl
-< 2023-10-06T21:20:39 hgnc-uniprot
+< 2023-10-13T21:27:22 hgnc-uniprot
 togoid-config config/hgnc-uniprot convert
-> 2023-10-06T21:20:40 hgnc-uniprot
+> 2023-10-13T21:27:22 hgnc-uniprot
 ### Update TTL for hmdb-chebi if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/hmdb-chebi.ttl is newer than output/tsv/hmdb-chebi.tsv
 # => Preserving output/ttl/hmdb-chebi.ttl
@@ -4172,36 +4252,42 @@ togoid-config config/hgnc-uniprot convert
 ### Update TTL for hp_phenotype-ncbigene if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/hp_phenotype-ncbigene.ttl is newer than output/tsv/hp_phenotype-ncbigene.tsv
 # => Preserving output/ttl/hp_phenotype-ncbigene.ttl
-### Update TTL for hp_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp false
-# File output/ttl/hp_phenotype-omim_phenotype.ttl is newer than output/tsv/hp_phenotype-omim_phenotype.tsv
-# => Preserving output/ttl/hp_phenotype-omim_phenotype.ttl
-### Update TTL for hp_phenotype-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp false
-# File output/ttl/hp_phenotype-orphanet_phenotype.ttl is newer than output/tsv/hp_phenotype-orphanet_phenotype.tsv
-# => Preserving output/ttl/hp_phenotype-orphanet_phenotype.ttl
+### Update TTL for hp_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true
+# File output/ttl/hp_phenotype-omim_phenotype.ttl is older than output/tsv/hp_phenotype-omim_phenotype.tsv
+## Convert output/tsv/hp_phenotype-omim_phenotype.tsv => output/ttl/hp_phenotype-omim_phenotype.ttl
+< 2023-10-13T21:27:22 hp_phenotype-omim_phenotype
+togoid-config config/hp_phenotype-omim_phenotype convert
+> 2023-10-13T21:27:23 hp_phenotype-omim_phenotype
+### Update TTL for hp_phenotype-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true
+# File output/ttl/hp_phenotype-orphanet_phenotype.ttl is older than output/tsv/hp_phenotype-orphanet_phenotype.tsv
+## Convert output/tsv/hp_phenotype-orphanet_phenotype.tsv => output/ttl/hp_phenotype-orphanet_phenotype.ttl
+< 2023-10-13T21:27:23 hp_phenotype-orphanet_phenotype
+togoid-config config/hp_phenotype-orphanet_phenotype convert
+> 2023-10-13T21:27:24 hp_phenotype-orphanet_phenotype
 ### Update TTL for insdc-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/insdc-bioproject.ttl is older than output/tsv/insdc-bioproject.tsv
 ## Convert output/tsv/insdc-bioproject.tsv => output/ttl/insdc-bioproject.ttl
-< 2023-10-06T21:20:40 insdc-bioproject
+< 2023-10-13T21:27:24 insdc-bioproject
 togoid-config config/insdc-bioproject convert
-> 2023-10-06T21:29:43 insdc-bioproject
+> 2023-10-13T21:36:20 insdc-bioproject
 ### Update TTL for insdc-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/insdc-biosample.ttl is older than output/tsv/insdc-biosample.tsv
 ## Convert output/tsv/insdc-biosample.tsv => output/ttl/insdc-biosample.ttl
-< 2023-10-06T21:29:43 insdc-biosample
+< 2023-10-13T21:36:20 insdc-biosample
 togoid-config config/insdc-biosample convert
-> 2023-10-06T22:09:28 insdc-biosample
+> 2023-10-13T22:14:22 insdc-biosample
 ### Update TTL for insdc_master-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/insdc_master-bioproject.ttl is older than output/tsv/insdc_master-bioproject.tsv
 ## Convert output/tsv/insdc_master-bioproject.tsv => output/ttl/insdc_master-bioproject.ttl
-< 2023-10-06T22:09:28 insdc_master-bioproject
+< 2023-10-13T22:14:22 insdc_master-bioproject
 togoid-config config/insdc_master-bioproject convert
-> 2023-10-06T22:09:42 insdc_master-bioproject
+> 2023-10-13T22:14:35 insdc_master-bioproject
 ### Update TTL for insdc_master-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/insdc_master-biosample.ttl is older than output/tsv/insdc_master-biosample.tsv
 ## Convert output/tsv/insdc_master-biosample.tsv => output/ttl/insdc_master-biosample.ttl
-< 2023-10-06T22:09:42 insdc_master-biosample
+< 2023-10-13T22:14:35 insdc_master-biosample
 togoid-config config/insdc_master-biosample convert
-> 2023-10-06T22:09:55 insdc_master-biosample
+> 2023-10-13T22:14:51 insdc_master-biosample
 ### Update TTL for interpro-go if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/interpro-go.ttl is newer than output/tsv/interpro-go.tsv
 # => Preserving output/ttl/interpro-go.ttl
@@ -4211,509 +4297,525 @@ togoid-config config/insdc_master-biosample convert
 ### Update TTL for interpro-pfam if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/interpro-pfam.ttl is newer than output/tsv/interpro-pfam.tsv
 # => Preserving output/ttl/interpro-pfam.ttl
+### Update TTL for interpro-prosite if check_ttl_filesize true or check_ttl_timestamp true
+## Convert output/tsv/interpro-prosite.tsv => output/ttl/interpro-prosite.ttl
+< 2023-10-13T22:14:51 interpro-prosite
+togoid-config config/interpro-prosite convert
+> 2023-10-13T22:14:51 interpro-prosite
 ### Update TTL for interpro-pubmed if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/interpro-pubmed.ttl is newer than output/tsv/interpro-pubmed.tsv
 # => Preserving output/ttl/interpro-pubmed.ttl
 ### Update TTL for interpro-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/interpro-reactome_pathway.ttl is newer than output/tsv/interpro-reactome_pathway.tsv
 # => Preserving output/ttl/interpro-reactome_pathway.ttl
+### Update TTL for interpro-smart if check_ttl_filesize true or check_ttl_timestamp true
+## Convert output/tsv/interpro-smart.tsv => output/ttl/interpro-smart.ttl
+< 2023-10-13T22:14:51 interpro-smart
+togoid-config config/interpro-smart convert
+> 2023-10-13T22:14:51 interpro-smart
 ### Update TTL for interpro-uniprot if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/interpro-uniprot.ttl is newer than output/tsv/interpro-uniprot.tsv
 # => Preserving output/ttl/interpro-uniprot.ttl
 ### Update TTL for jga_study-jga_dataset if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/jga_study-jga_dataset.ttl is older than output/tsv/jga_study-jga_dataset.tsv
 ## Convert output/tsv/jga_study-jga_dataset.tsv => output/ttl/jga_study-jga_dataset.ttl
-< 2023-10-06T22:09:55 jga_study-jga_dataset
+< 2023-10-13T22:14:51 jga_study-jga_dataset
 togoid-config config/jga_study-jga_dataset convert
-> 2023-10-06T22:09:55 jga_study-jga_dataset
+> 2023-10-13T22:14:52 jga_study-jga_dataset
 ### Update TTL for jga_study-nbdc_human_db if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/jga_study-nbdc_human_db.ttl is older than output/tsv/jga_study-nbdc_human_db.tsv
 ## Convert output/tsv/jga_study-nbdc_human_db.tsv => output/ttl/jga_study-nbdc_human_db.ttl
-< 2023-10-06T22:09:55 jga_study-nbdc_human_db
+< 2023-10-13T22:14:52 jga_study-nbdc_human_db
 togoid-config config/jga_study-nbdc_human_db convert
-> 2023-10-06T22:09:55 jga_study-nbdc_human_db
+> 2023-10-13T22:14:52 jga_study-nbdc_human_db
 ### Update TTL for jga_study-pubmed if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/jga_study-pubmed.ttl is older than output/tsv/jga_study-pubmed.tsv
 ## Convert output/tsv/jga_study-pubmed.tsv => output/ttl/jga_study-pubmed.ttl
-< 2023-10-06T22:09:55 jga_study-pubmed
+< 2023-10-13T22:14:52 jga_study-pubmed
 togoid-config config/jga_study-pubmed convert
-> 2023-10-06T22:09:56 jga_study-pubmed
+> 2023-10-13T22:14:52 jga_study-pubmed
 ### Update TTL for lipidmaps-chebi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/lipidmaps-chebi.ttl is older than output/tsv/lipidmaps-chebi.tsv
 ## Convert output/tsv/lipidmaps-chebi.tsv => output/ttl/lipidmaps-chebi.ttl
-< 2023-10-06T22:09:56 lipidmaps-chebi
+< 2023-10-13T22:14:52 lipidmaps-chebi
 togoid-config config/lipidmaps-chebi convert
-> 2023-10-06T22:09:56 lipidmaps-chebi
+> 2023-10-13T22:14:53 lipidmaps-chebi
 ### Update TTL for lipidmaps-inchi_key if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/lipidmaps-inchi_key.ttl is older than output/tsv/lipidmaps-inchi_key.tsv
 ## Convert output/tsv/lipidmaps-inchi_key.tsv => output/ttl/lipidmaps-inchi_key.ttl
-< 2023-10-06T22:09:56 lipidmaps-inchi_key
+< 2023-10-13T22:14:53 lipidmaps-inchi_key
 togoid-config config/lipidmaps-inchi_key convert
-> 2023-10-06T22:09:57 lipidmaps-inchi_key
+> 2023-10-13T22:14:53 lipidmaps-inchi_key
 ### Update TTL for lipidmaps-swisslipids if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/lipidmaps-swisslipids.ttl is older than output/tsv/lipidmaps-swisslipids.tsv
 ## Convert output/tsv/lipidmaps-swisslipids.tsv => output/ttl/lipidmaps-swisslipids.ttl
-< 2023-10-06T22:09:57 lipidmaps-swisslipids
+< 2023-10-13T22:14:53 lipidmaps-swisslipids
 togoid-config config/lipidmaps-swisslipids convert
-> 2023-10-06T22:09:57 lipidmaps-swisslipids
+> 2023-10-13T22:14:54 lipidmaps-swisslipids
 ### Update TTL for mbgd_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mbgd_gene-uniprot.ttl is older than output/tsv/mbgd_gene-uniprot.tsv
 ## Convert output/tsv/mbgd_gene-uniprot.tsv => output/ttl/mbgd_gene-uniprot.ttl
-< 2023-10-06T22:09:57 mbgd_gene-uniprot
+< 2023-10-13T22:14:54 mbgd_gene-uniprot
 togoid-config config/mbgd_gene-uniprot convert
-> 2023-10-06T23:02:57 mbgd_gene-uniprot
+> 2023-10-13T23:06:32 mbgd_gene-uniprot
 ### Update TTL for mbgd_organism-taxonomy if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mbgd_organism-taxonomy.ttl is older than output/tsv/mbgd_organism-taxonomy.tsv
 ## Convert output/tsv/mbgd_organism-taxonomy.tsv => output/ttl/mbgd_organism-taxonomy.ttl
-< 2023-10-06T23:02:57 mbgd_organism-taxonomy
+< 2023-10-13T23:06:32 mbgd_organism-taxonomy
 togoid-config config/mbgd_organism-taxonomy convert
-> 2023-10-06T23:02:57 mbgd_organism-taxonomy
+> 2023-10-13T23:06:32 mbgd_organism-taxonomy
 ### Update TTL for medgen-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/medgen-hp_phenotype.ttl is older than output/tsv/medgen-hp_phenotype.tsv
 ## Convert output/tsv/medgen-hp_phenotype.tsv => output/ttl/medgen-hp_phenotype.ttl
-< 2023-10-06T23:02:57 medgen-hp_phenotype
+< 2023-10-13T23:06:32 medgen-hp_phenotype
 togoid-config config/medgen-hp_phenotype convert
-> 2023-10-06T23:02:58 medgen-hp_phenotype
+> 2023-10-13T23:06:33 medgen-hp_phenotype
 ### Update TTL for medgen-mesh if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/medgen-mesh.ttl is older than output/tsv/medgen-mesh.tsv
 ## Convert output/tsv/medgen-mesh.tsv => output/ttl/medgen-mesh.ttl
-< 2023-10-06T23:02:58 medgen-mesh
+< 2023-10-13T23:06:33 medgen-mesh
 togoid-config config/medgen-mesh convert
-> 2023-10-06T23:02:58 medgen-mesh
+> 2023-10-13T23:06:33 medgen-mesh
 ### Update TTL for medgen-mondo if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/medgen-mondo.ttl is older than output/tsv/medgen-mondo.tsv
 ## Convert output/tsv/medgen-mondo.tsv => output/ttl/medgen-mondo.ttl
-< 2023-10-06T23:02:58 medgen-mondo
+< 2023-10-13T23:06:33 medgen-mondo
 togoid-config config/medgen-mondo convert
-> 2023-10-06T23:02:59 medgen-mondo
+> 2023-10-13T23:06:33 medgen-mondo
 ### Update TTL for medgen-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/medgen-ncbigene.ttl is older than output/tsv/medgen-ncbigene.tsv
 ## Convert output/tsv/medgen-ncbigene.tsv => output/ttl/medgen-ncbigene.ttl
-< 2023-10-06T23:02:59 medgen-ncbigene
+< 2023-10-13T23:06:33 medgen-ncbigene
 togoid-config config/medgen-ncbigene convert
-> 2023-10-06T23:02:59 medgen-ncbigene
+> 2023-10-13T23:06:34 medgen-ncbigene
 ### Update TTL for medgen-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/medgen-omim_phenotype.ttl is older than output/tsv/medgen-omim_phenotype.tsv
 ## Convert output/tsv/medgen-omim_phenotype.tsv => output/ttl/medgen-omim_phenotype.ttl
-< 2023-10-06T23:02:59 medgen-omim_phenotype
+< 2023-10-13T23:06:34 medgen-omim_phenotype
 togoid-config config/medgen-omim_phenotype convert
-> 2023-10-06T23:02:59 medgen-omim_phenotype
+> 2023-10-13T23:06:34 medgen-omim_phenotype
 ### Update TTL for medgen-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/medgen-orphanet_phenotype.ttl is older than output/tsv/medgen-orphanet_phenotype.tsv
 ## Convert output/tsv/medgen-orphanet_phenotype.tsv => output/ttl/medgen-orphanet_phenotype.ttl
-< 2023-10-06T23:02:59 medgen-orphanet_phenotype
+< 2023-10-13T23:06:34 medgen-orphanet_phenotype
 togoid-config config/medgen-orphanet_phenotype convert
-> 2023-10-06T23:03:00 medgen-orphanet_phenotype
+> 2023-10-13T23:06:34 medgen-orphanet_phenotype
 ### Update TTL for mondo-doid if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mondo-doid.ttl is older than output/tsv/mondo-doid.tsv
 ## Convert output/tsv/mondo-doid.tsv => output/ttl/mondo-doid.ttl
-< 2023-10-06T23:03:00 mondo-doid
+< 2023-10-13T23:06:34 mondo-doid
 togoid-config config/mondo-doid convert
-> 2023-10-06T23:03:00 mondo-doid
+> 2023-10-13T23:06:34 mondo-doid
 ### Update TTL for mondo-hp_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mondo-hp_phenotype.ttl is older than output/tsv/mondo-hp_phenotype.tsv
 ## Convert output/tsv/mondo-hp_phenotype.tsv => output/ttl/mondo-hp_phenotype.ttl
-< 2023-10-06T23:03:00 mondo-hp_phenotype
+< 2023-10-13T23:06:34 mondo-hp_phenotype
 togoid-config config/mondo-hp_phenotype convert
-> 2023-10-06T23:03:00 mondo-hp_phenotype
+> 2023-10-13T23:06:35 mondo-hp_phenotype
 ### Update TTL for mondo-meddra if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mondo-meddra.ttl is older than output/tsv/mondo-meddra.tsv
 ## Convert output/tsv/mondo-meddra.tsv => output/ttl/mondo-meddra.ttl
-< 2023-10-06T23:03:00 mondo-meddra
+< 2023-10-13T23:06:35 mondo-meddra
 togoid-config config/mondo-meddra convert
-> 2023-10-06T23:03:00 mondo-meddra
+> 2023-10-13T23:06:35 mondo-meddra
 ### Update TTL for mondo-mesh if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mondo-mesh.ttl is older than output/tsv/mondo-mesh.tsv
 ## Convert output/tsv/mondo-mesh.tsv => output/ttl/mondo-mesh.ttl
-< 2023-10-06T23:03:00 mondo-mesh
+< 2023-10-13T23:06:35 mondo-mesh
 togoid-config config/mondo-mesh convert
-> 2023-10-06T23:03:01 mondo-mesh
+> 2023-10-13T23:06:35 mondo-mesh
 ### Update TTL for mondo-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mondo-omim_phenotype.ttl is older than output/tsv/mondo-omim_phenotype.tsv
 ## Convert output/tsv/mondo-omim_phenotype.tsv => output/ttl/mondo-omim_phenotype.ttl
-< 2023-10-06T23:03:01 mondo-omim_phenotype
+< 2023-10-13T23:06:35 mondo-omim_phenotype
 togoid-config config/mondo-omim_phenotype convert
-> 2023-10-06T23:03:01 mondo-omim_phenotype
+> 2023-10-13T23:06:35 mondo-omim_phenotype
 ### Update TTL for mondo-orphanet_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/mondo-orphanet_phenotype.ttl is older than output/tsv/mondo-orphanet_phenotype.tsv
 ## Convert output/tsv/mondo-orphanet_phenotype.tsv => output/ttl/mondo-orphanet_phenotype.ttl
-< 2023-10-06T23:03:01 mondo-orphanet_phenotype
+< 2023-10-13T23:06:35 mondo-orphanet_phenotype
 togoid-config config/mondo-orphanet_phenotype convert
-> 2023-10-06T23:03:01 mondo-orphanet_phenotype
+> 2023-10-13T23:06:36 mondo-orphanet_phenotype
 ### Update TTL for nando-mondo if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/nando-mondo.ttl is older than output/tsv/nando-mondo.tsv
 ## Convert output/tsv/nando-mondo.tsv => output/ttl/nando-mondo.ttl
-< 2023-10-06T23:03:01 nando-mondo
+< 2023-10-13T23:06:36 nando-mondo
 togoid-config config/nando-mondo convert
-> 2023-10-06T23:03:01 nando-mondo
+> 2023-10-13T23:06:36 nando-mondo
 ### Update TTL for ncbigene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-ensembl_gene.ttl is older than output/tsv/ncbigene-ensembl_gene.tsv
 ## Convert output/tsv/ncbigene-ensembl_gene.tsv => output/ttl/ncbigene-ensembl_gene.ttl
-< 2023-10-06T23:03:01 ncbigene-ensembl_gene
+< 2023-10-13T23:06:36 ncbigene-ensembl_gene
 togoid-config config/ncbigene-ensembl_gene convert
-> 2023-10-06T23:04:17 ncbigene-ensembl_gene
+> 2023-10-13T23:07:49 ncbigene-ensembl_gene
 ### Update TTL for ncbigene-ensembl_protein if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-ensembl_protein.ttl is older than output/tsv/ncbigene-ensembl_protein.tsv
 ## Convert output/tsv/ncbigene-ensembl_protein.tsv => output/ttl/ncbigene-ensembl_protein.ttl
-< 2023-10-06T23:04:17 ncbigene-ensembl_protein
+< 2023-10-13T23:07:49 ncbigene-ensembl_protein
 togoid-config config/ncbigene-ensembl_protein convert
-> 2023-10-06T23:05:43 ncbigene-ensembl_protein
+> 2023-10-13T23:09:15 ncbigene-ensembl_protein
 ### Update TTL for ncbigene-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-ensembl_transcript.ttl is older than output/tsv/ncbigene-ensembl_transcript.tsv
 ## Convert output/tsv/ncbigene-ensembl_transcript.tsv => output/ttl/ncbigene-ensembl_transcript.ttl
-< 2023-10-06T23:05:43 ncbigene-ensembl_transcript
+< 2023-10-13T23:09:15 ncbigene-ensembl_transcript
 togoid-config config/ncbigene-ensembl_transcript convert
-> 2023-10-06T23:07:11 ncbigene-ensembl_transcript
+> 2023-10-13T23:10:47 ncbigene-ensembl_transcript
 ### Update TTL for ncbigene-flybase_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-flybase_gene.ttl is older than output/tsv/ncbigene-flybase_gene.tsv
 ## Convert output/tsv/ncbigene-flybase_gene.tsv => output/ttl/ncbigene-flybase_gene.ttl
-< 2023-10-06T23:07:11 ncbigene-flybase_gene
+< 2023-10-13T23:10:47 ncbigene-flybase_gene
 togoid-config config/ncbigene-flybase_gene convert
-> 2023-10-06T23:07:12 ncbigene-flybase_gene
+> 2023-10-13T23:10:47 ncbigene-flybase_gene
 ### Update TTL for ncbigene-go if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-go.ttl is older than output/tsv/ncbigene-go.tsv
 ## Convert output/tsv/ncbigene-go.tsv => output/ttl/ncbigene-go.ttl
-< 2023-10-06T23:07:12 ncbigene-go
+< 2023-10-13T23:10:47 ncbigene-go
 togoid-config config/ncbigene-go convert
-> 2023-10-06T23:07:32 ncbigene-go
+> 2023-10-13T23:11:07 ncbigene-go
 ### Update TTL for ncbigene-hgnc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-hgnc.ttl is older than output/tsv/ncbigene-hgnc.tsv
 ## Convert output/tsv/ncbigene-hgnc.tsv => output/ttl/ncbigene-hgnc.ttl
-< 2023-10-06T23:07:32 ncbigene-hgnc
+< 2023-10-13T23:11:07 ncbigene-hgnc
 togoid-config config/ncbigene-hgnc convert
-> 2023-10-06T23:07:33 ncbigene-hgnc
+> 2023-10-13T23:11:08 ncbigene-hgnc
 ### Update TTL for ncbigene-mgi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-mgi.ttl is older than output/tsv/ncbigene-mgi.tsv
 ## Convert output/tsv/ncbigene-mgi.tsv => output/ttl/ncbigene-mgi.ttl
-< 2023-10-06T23:07:33 ncbigene-mgi
+< 2023-10-13T23:11:08 ncbigene-mgi
 togoid-config config/ncbigene-mgi convert
-> 2023-10-06T23:07:34 ncbigene-mgi
+> 2023-10-13T23:11:08 ncbigene-mgi
 ### Update TTL for ncbigene-mirbase if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-mirbase.ttl is older than output/tsv/ncbigene-mirbase.tsv
 ## Convert output/tsv/ncbigene-mirbase.tsv => output/ttl/ncbigene-mirbase.ttl
-< 2023-10-06T23:07:34 ncbigene-mirbase
+< 2023-10-13T23:11:08 ncbigene-mirbase
 togoid-config config/ncbigene-mirbase convert
-> 2023-10-06T23:07:34 ncbigene-mirbase
+> 2023-10-13T23:11:09 ncbigene-mirbase
 ### Update TTL for ncbigene-omim_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-omim_gene.ttl is older than output/tsv/ncbigene-omim_gene.tsv
 ## Convert output/tsv/ncbigene-omim_gene.tsv => output/ttl/ncbigene-omim_gene.ttl
-< 2023-10-06T23:07:34 ncbigene-omim_gene
+< 2023-10-13T23:11:09 ncbigene-omim_gene
 togoid-config config/ncbigene-omim_gene convert
-> 2023-10-06T23:07:35 ncbigene-omim_gene
+> 2023-10-13T23:11:09 ncbigene-omim_gene
 ### Update TTL for ncbigene-refseq_genomic if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-refseq_genomic.ttl is older than output/tsv/ncbigene-refseq_genomic.tsv
 ## Convert output/tsv/ncbigene-refseq_genomic.tsv => output/ttl/ncbigene-refseq_genomic.ttl
-< 2023-10-06T23:07:35 ncbigene-refseq_genomic
+< 2023-10-13T23:11:09 ncbigene-refseq_genomic
 togoid-config config/ncbigene-refseq_genomic convert
-> 2023-10-06T23:07:37 ncbigene-refseq_genomic
+> 2023-10-13T23:11:11 ncbigene-refseq_genomic
 ### Update TTL for ncbigene-refseq_protein if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-refseq_protein.ttl is older than output/tsv/ncbigene-refseq_protein.tsv
 ## Convert output/tsv/ncbigene-refseq_protein.tsv => output/ttl/ncbigene-refseq_protein.ttl
-< 2023-10-06T23:07:37 ncbigene-refseq_protein
+< 2023-10-13T23:11:11 ncbigene-refseq_protein
 togoid-config config/ncbigene-refseq_protein convert
-> 2023-10-06T23:19:51 ncbigene-refseq_protein
+> 2023-10-13T23:22:10 ncbigene-refseq_protein
 ### Update TTL for ncbigene-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-refseq_rna.ttl is older than output/tsv/ncbigene-refseq_rna.tsv
 ## Convert output/tsv/ncbigene-refseq_rna.tsv => output/ttl/ncbigene-refseq_rna.ttl
-< 2023-10-06T23:19:51 ncbigene-refseq_rna
+< 2023-10-13T23:22:10 ncbigene-refseq_rna
 togoid-config config/ncbigene-refseq_rna convert
-> 2023-10-06T23:29:57 ncbigene-refseq_rna
+> 2023-10-13T23:31:42 ncbigene-refseq_rna
 ### Update TTL for ncbigene-rgd if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-rgd.ttl is older than output/tsv/ncbigene-rgd.tsv
 ## Convert output/tsv/ncbigene-rgd.tsv => output/ttl/ncbigene-rgd.ttl
-< 2023-10-06T23:29:57 ncbigene-rgd
+< 2023-10-13T23:31:42 ncbigene-rgd
 togoid-config config/ncbigene-rgd convert
-> 2023-10-06T23:29:57 ncbigene-rgd
+> 2023-10-13T23:31:43 ncbigene-rgd
 ### Update TTL for ncbigene-sgd if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-sgd.ttl is older than output/tsv/ncbigene-sgd.tsv
 ## Convert output/tsv/ncbigene-sgd.tsv => output/ttl/ncbigene-sgd.ttl
-< 2023-10-06T23:29:57 ncbigene-sgd
+< 2023-10-13T23:31:43 ncbigene-sgd
 togoid-config config/ncbigene-sgd convert
-> 2023-10-06T23:29:58 ncbigene-sgd
+> 2023-10-13T23:31:43 ncbigene-sgd
 ### Update TTL for ncbigene-tair if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-tair.ttl is older than output/tsv/ncbigene-tair.tsv
 ## Convert output/tsv/ncbigene-tair.tsv => output/ttl/ncbigene-tair.ttl
-< 2023-10-06T23:29:58 ncbigene-tair
+< 2023-10-13T23:31:43 ncbigene-tair
 togoid-config config/ncbigene-tair convert
-> 2023-10-06T23:29:58 ncbigene-tair
+> 2023-10-13T23:31:44 ncbigene-tair
 ### Update TTL for ncbigene-taxonomy if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-taxonomy.ttl is older than output/tsv/ncbigene-taxonomy.tsv
 ## Convert output/tsv/ncbigene-taxonomy.tsv => output/ttl/ncbigene-taxonomy.ttl
-< 2023-10-06T23:29:58 ncbigene-taxonomy
+< 2023-10-13T23:31:44 ncbigene-taxonomy
 togoid-config config/ncbigene-taxonomy convert
-> 2023-10-06T23:37:47 ncbigene-taxonomy
+> 2023-10-13T23:39:07 ncbigene-taxonomy
 ### Update TTL for ncbigene-vgnc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-vgnc.ttl is older than output/tsv/ncbigene-vgnc.tsv
 ## Convert output/tsv/ncbigene-vgnc.tsv => output/ttl/ncbigene-vgnc.ttl
-< 2023-10-06T23:37:47 ncbigene-vgnc
+< 2023-10-13T23:39:07 ncbigene-vgnc
 togoid-config config/ncbigene-vgnc convert
-> 2023-10-06T23:37:48 ncbigene-vgnc
+> 2023-10-13T23:39:08 ncbigene-vgnc
 ### Update TTL for ncbigene-wormbase_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-wormbase_gene.ttl is older than output/tsv/ncbigene-wormbase_gene.tsv
 ## Convert output/tsv/ncbigene-wormbase_gene.tsv => output/ttl/ncbigene-wormbase_gene.ttl
-< 2023-10-06T23:37:48 ncbigene-wormbase_gene
+< 2023-10-13T23:39:08 ncbigene-wormbase_gene
 togoid-config config/ncbigene-wormbase_gene convert
-> 2023-10-06T23:37:48 ncbigene-wormbase_gene
+> 2023-10-13T23:39:09 ncbigene-wormbase_gene
 ### Update TTL for ncbigene-xenbase_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-xenbase_gene.ttl is older than output/tsv/ncbigene-xenbase_gene.tsv
 ## Convert output/tsv/ncbigene-xenbase_gene.tsv => output/ttl/ncbigene-xenbase_gene.ttl
-< 2023-10-06T23:37:48 ncbigene-xenbase_gene
+< 2023-10-13T23:39:09 ncbigene-xenbase_gene
 togoid-config config/ncbigene-xenbase_gene convert
-> 2023-10-06T23:37:49 ncbigene-xenbase_gene
+> 2023-10-13T23:39:09 ncbigene-xenbase_gene
 ### Update TTL for ncbigene-zfin_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncbigene-zfin_gene.ttl is older than output/tsv/ncbigene-zfin_gene.tsv
 ## Convert output/tsv/ncbigene-zfin_gene.tsv => output/ttl/ncbigene-zfin_gene.ttl
-< 2023-10-06T23:37:49 ncbigene-zfin_gene
+< 2023-10-13T23:39:09 ncbigene-zfin_gene
 togoid-config config/ncbigene-zfin_gene convert
-> 2023-10-06T23:37:49 ncbigene-zfin_gene
+> 2023-10-13T23:39:10 ncbigene-zfin_gene
 ### Update TTL for ncit_disease-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/ncit_disease-ncit_tissue.ttl is older than output/tsv/ncit_disease-ncit_tissue.tsv
 ## Convert output/tsv/ncit_disease-ncit_tissue.tsv => output/ttl/ncit_disease-ncit_tissue.ttl
-< 2023-10-06T23:37:49 ncit_disease-ncit_tissue
+< 2023-10-13T23:39:10 ncit_disease-ncit_tissue
 togoid-config config/ncit_disease-ncit_tissue convert
-> 2023-10-06T23:37:50 ncit_disease-ncit_tissue
+> 2023-10-13T23:39:10 ncit_disease-ncit_tissue
 ### Update TTL for oma_protein-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/oma_protein-ensembl_gene.ttl is older than output/tsv/oma_protein-ensembl_gene.tsv
 ## Convert output/tsv/oma_protein-ensembl_gene.tsv => output/ttl/oma_protein-ensembl_gene.ttl
-< 2023-10-06T23:37:50 oma_protein-ensembl_gene
+< 2023-10-13T23:39:10 oma_protein-ensembl_gene
 togoid-config config/oma_protein-ensembl_gene convert
-> 2023-10-06T23:38:12 oma_protein-ensembl_gene
+> 2023-10-13T23:39:31 oma_protein-ensembl_gene
 ### Update TTL for oma_protein-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/oma_protein-ensembl_transcript.ttl is older than output/tsv/oma_protein-ensembl_transcript.tsv
 ## Convert output/tsv/oma_protein-ensembl_transcript.tsv => output/ttl/oma_protein-ensembl_transcript.ttl
-< 2023-10-06T23:38:12 oma_protein-ensembl_transcript
+< 2023-10-13T23:39:31 oma_protein-ensembl_transcript
 togoid-config config/oma_protein-ensembl_transcript convert
-> 2023-10-06T23:38:37 oma_protein-ensembl_transcript
-### Update TTL for oma_protein-ncbigene if check_ttl_filesize true or check_ttl_timestamp true
+> 2023-10-13T23:39:55 oma_protein-ensembl_transcript
+### Update TTL for oma_protein-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
+# File output/ttl/oma_protein-ncbigene.ttl is older than output/tsv/oma_protein-ncbigene.tsv
 ## Convert output/tsv/oma_protein-ncbigene.tsv => output/ttl/oma_protein-ncbigene.ttl
-< 2023-10-06T23:38:37 oma_protein-ncbigene
+< 2023-10-13T23:39:55 oma_protein-ncbigene
 togoid-config config/oma_protein-ncbigene convert
-> 2023-10-06T23:39:36 oma_protein-ncbigene
+> 2023-10-13T23:40:52 oma_protein-ncbigene
 ### Update TTL for oma_protein-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/oma_protein-uniprot.ttl is older than output/tsv/oma_protein-uniprot.tsv
 ## Convert output/tsv/oma_protein-uniprot.tsv => output/ttl/oma_protein-uniprot.ttl
-< 2023-10-06T23:39:36 oma_protein-uniprot
+< 2023-10-13T23:40:52 oma_protein-uniprot
 togoid-config config/oma_protein-uniprot convert
-> 2023-10-06T23:42:09 oma_protein-uniprot
+> 2023-10-13T23:43:17 oma_protein-uniprot
 ### Update TTL for orphanet_gene-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_gene-ensembl_gene.ttl is older than output/tsv/orphanet_gene-ensembl_gene.tsv
 ## Convert output/tsv/orphanet_gene-ensembl_gene.tsv => output/ttl/orphanet_gene-ensembl_gene.ttl
-< 2023-10-06T23:42:09 orphanet_gene-ensembl_gene
+< 2023-10-13T23:43:17 orphanet_gene-ensembl_gene
 togoid-config config/orphanet_gene-ensembl_gene convert
-> 2023-10-06T23:42:09 orphanet_gene-ensembl_gene
+> 2023-10-13T23:43:17 orphanet_gene-ensembl_gene
 ### Update TTL for orphanet_gene-hgnc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_gene-hgnc.ttl is older than output/tsv/orphanet_gene-hgnc.tsv
 ## Convert output/tsv/orphanet_gene-hgnc.tsv => output/ttl/orphanet_gene-hgnc.ttl
-< 2023-10-06T23:42:09 orphanet_gene-hgnc
+< 2023-10-13T23:43:17 orphanet_gene-hgnc
 togoid-config config/orphanet_gene-hgnc convert
-> 2023-10-06T23:42:09 orphanet_gene-hgnc
+> 2023-10-13T23:43:17 orphanet_gene-hgnc
 ### Update TTL for orphanet_gene-omim_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_gene-omim_gene.ttl is older than output/tsv/orphanet_gene-omim_gene.tsv
 ## Convert output/tsv/orphanet_gene-omim_gene.tsv => output/ttl/orphanet_gene-omim_gene.ttl
-< 2023-10-06T23:42:09 orphanet_gene-omim_gene
+< 2023-10-13T23:43:17 orphanet_gene-omim_gene
 togoid-config config/orphanet_gene-omim_gene convert
-> 2023-10-06T23:42:10 orphanet_gene-omim_gene
+> 2023-10-13T23:43:17 orphanet_gene-omim_gene
 ### Update TTL for orphanet_gene-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_gene-uniprot.ttl is older than output/tsv/orphanet_gene-uniprot.tsv
 ## Convert output/tsv/orphanet_gene-uniprot.tsv => output/ttl/orphanet_gene-uniprot.ttl
-< 2023-10-06T23:42:10 orphanet_gene-uniprot
+< 2023-10-13T23:43:17 orphanet_gene-uniprot
 togoid-config config/orphanet_gene-uniprot convert
-> 2023-10-06T23:42:10 orphanet_gene-uniprot
+> 2023-10-13T23:43:18 orphanet_gene-uniprot
 ### Update TTL for orphanet_phenotype-meddra if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_phenotype-meddra.ttl is older than output/tsv/orphanet_phenotype-meddra.tsv
 ## Convert output/tsv/orphanet_phenotype-meddra.tsv => output/ttl/orphanet_phenotype-meddra.ttl
-< 2023-10-06T23:42:10 orphanet_phenotype-meddra
+< 2023-10-13T23:43:18 orphanet_phenotype-meddra
 togoid-config config/orphanet_phenotype-meddra convert
-> 2023-10-06T23:42:10 orphanet_phenotype-meddra
+> 2023-10-13T23:43:18 orphanet_phenotype-meddra
 ### Update TTL for orphanet_phenotype-mesh if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_phenotype-mesh.ttl is older than output/tsv/orphanet_phenotype-mesh.tsv
 ## Convert output/tsv/orphanet_phenotype-mesh.tsv => output/ttl/orphanet_phenotype-mesh.ttl
-< 2023-10-06T23:42:10 orphanet_phenotype-mesh
+< 2023-10-13T23:43:18 orphanet_phenotype-mesh
 togoid-config config/orphanet_phenotype-mesh convert
-> 2023-10-06T23:42:11 orphanet_phenotype-mesh
+> 2023-10-13T23:43:18 orphanet_phenotype-mesh
 ### Update TTL for orphanet_phenotype-omim_phenotype if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_phenotype-omim_phenotype.ttl is older than output/tsv/orphanet_phenotype-omim_phenotype.tsv
 ## Convert output/tsv/orphanet_phenotype-omim_phenotype.tsv => output/ttl/orphanet_phenotype-omim_phenotype.ttl
-< 2023-10-06T23:42:11 orphanet_phenotype-omim_phenotype
+< 2023-10-13T23:43:18 orphanet_phenotype-omim_phenotype
 togoid-config config/orphanet_phenotype-omim_phenotype convert
-> 2023-10-06T23:42:11 orphanet_phenotype-omim_phenotype
+> 2023-10-13T23:43:18 orphanet_phenotype-omim_phenotype
 ### Update TTL for orphanet_phenotype-orphanet_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/orphanet_phenotype-orphanet_gene.ttl is older than output/tsv/orphanet_phenotype-orphanet_gene.tsv
 ## Convert output/tsv/orphanet_phenotype-orphanet_gene.tsv => output/ttl/orphanet_phenotype-orphanet_gene.ttl
-< 2023-10-06T23:42:11 orphanet_phenotype-orphanet_gene
+< 2023-10-13T23:43:19 orphanet_phenotype-orphanet_gene
 togoid-config config/orphanet_phenotype-orphanet_gene convert
-> 2023-10-06T23:42:11 orphanet_phenotype-orphanet_gene
+> 2023-10-13T23:43:19 orphanet_phenotype-orphanet_gene
 ### Update TTL for pdb-go if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pdb-go.ttl is older than output/tsv/pdb-go.tsv
 ## Convert output/tsv/pdb-go.tsv => output/ttl/pdb-go.ttl
-< 2023-10-06T23:42:11 pdb-go
+< 2023-10-13T23:43:19 pdb-go
 togoid-config config/pdb-go convert
-> 2023-10-06T23:42:24 pdb-go
+> 2023-10-13T23:43:30 pdb-go
 ### Update TTL for pdb-interpro if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pdb-interpro.ttl is older than output/tsv/pdb-interpro.tsv
 ## Convert output/tsv/pdb-interpro.tsv => output/ttl/pdb-interpro.ttl
-< 2023-10-06T23:42:24 pdb-interpro
+< 2023-10-13T23:43:30 pdb-interpro
 togoid-config config/pdb-interpro convert
-> 2023-10-06T23:42:30 pdb-interpro
+> 2023-10-13T23:43:36 pdb-interpro
 ### Update TTL for pdb-pdb_ccd if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pdb-pdb_ccd.ttl is older than output/tsv/pdb-pdb_ccd.tsv
 ## Convert output/tsv/pdb-pdb_ccd.tsv => output/ttl/pdb-pdb_ccd.ttl
-< 2023-10-06T23:42:30 pdb-pdb_ccd
+< 2023-10-13T23:43:36 pdb-pdb_ccd
 togoid-config config/pdb-pdb_ccd convert
-> 2023-10-06T23:42:34 pdb-pdb_ccd
+> 2023-10-13T23:43:40 pdb-pdb_ccd
 ### Update TTL for pdb-pfam if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pdb-pfam.ttl is older than output/tsv/pdb-pfam.tsv
 ## Convert output/tsv/pdb-pfam.tsv => output/ttl/pdb-pfam.ttl
-< 2023-10-06T23:42:34 pdb-pfam
+< 2023-10-13T23:43:40 pdb-pfam
 togoid-config config/pdb-pfam convert
-> 2023-10-06T23:42:37 pdb-pfam
+> 2023-10-13T23:43:42 pdb-pfam
 ### Update TTL for pdb-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pdb-uniprot.ttl is older than output/tsv/pdb-uniprot.tsv
 ## Convert output/tsv/pdb-uniprot.tsv => output/ttl/pdb-uniprot.ttl
-< 2023-10-06T23:42:37 pdb-uniprot
+< 2023-10-13T23:43:42 pdb-uniprot
 togoid-config config/pdb-uniprot convert
-> 2023-10-06T23:42:40 pdb-uniprot
+> 2023-10-13T23:43:45 pdb-uniprot
+### Update TTL for prosite-prosite_prorule if check_ttl_filesize true or check_ttl_timestamp true
+## Convert output/tsv/prosite-prosite_prorule.tsv => output/ttl/prosite-prosite_prorule.ttl
+< 2023-10-13T23:43:45 prosite-prosite_prorule
+togoid-config config/prosite-prosite_prorule convert
+> 2023-10-13T23:43:45 prosite-prosite_prorule
 ### Update TTL for pubchem_compound-atc if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/pubchem_compound-atc.ttl is newer than output/tsv/pubchem_compound-atc.tsv
 # => Preserving output/ttl/pubchem_compound-atc.ttl
 ### Update TTL for pubchem_compound-chebi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_compound-chebi.ttl is older than output/tsv/pubchem_compound-chebi.tsv
 ## Convert output/tsv/pubchem_compound-chebi.tsv => output/ttl/pubchem_compound-chebi.ttl
-< 2023-10-06T23:42:40 pubchem_compound-chebi
+< 2023-10-13T23:43:45 pubchem_compound-chebi
 togoid-config config/pubchem_compound-chebi convert
-> 2023-10-06T23:42:42 pubchem_compound-chebi
+> 2023-10-13T23:43:46 pubchem_compound-chebi
 ### Update TTL for pubchem_compound-chembl_compound if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_compound-chembl_compound.ttl is older than output/tsv/pubchem_compound-chembl_compound.tsv
 ## Convert output/tsv/pubchem_compound-chembl_compound.tsv => output/ttl/pubchem_compound-chembl_compound.ttl
-< 2023-10-06T23:42:42 pubchem_compound-chembl_compound
+< 2023-10-13T23:43:46 pubchem_compound-chembl_compound
 togoid-config config/pubchem_compound-chembl_compound convert
-> 2023-10-06T23:43:02 pubchem_compound-chembl_compound
+> 2023-10-13T23:44:06 pubchem_compound-chembl_compound
 ### Update TTL for pubchem_compound-drugbank if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_compound-drugbank.ttl is older than output/tsv/pubchem_compound-drugbank.tsv
 ## Convert output/tsv/pubchem_compound-drugbank.tsv => output/ttl/pubchem_compound-drugbank.ttl
-< 2023-10-06T23:43:02 pubchem_compound-drugbank
+< 2023-10-13T23:44:06 pubchem_compound-drugbank
 togoid-config config/pubchem_compound-drugbank convert
-> 2023-10-06T23:43:02 pubchem_compound-drugbank
+> 2023-10-13T23:44:06 pubchem_compound-drugbank
 ### Update TTL for pubchem_compound-glytoucan if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_compound-glytoucan.ttl is older than output/tsv/pubchem_compound-glytoucan.tsv
 ## Convert output/tsv/pubchem_compound-glytoucan.tsv => output/ttl/pubchem_compound-glytoucan.ttl
-< 2023-10-06T23:43:02 pubchem_compound-glytoucan
+< 2023-10-13T23:44:06 pubchem_compound-glytoucan
 togoid-config config/pubchem_compound-glytoucan convert
-> 2023-10-06T23:43:03 pubchem_compound-glytoucan
+> 2023-10-13T23:44:06 pubchem_compound-glytoucan
 ### Update TTL for pubchem_compound-inchi_key if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_compound-inchi_key.ttl is older than output/tsv/pubchem_compound-inchi_key.tsv
 ## Convert output/tsv/pubchem_compound-inchi_key.tsv => output/ttl/pubchem_compound-inchi_key.ttl
-< 2023-10-06T23:43:03 pubchem_compound-inchi_key
+< 2023-10-13T23:44:06 pubchem_compound-inchi_key
 togoid-config config/pubchem_compound-inchi_key convert
-> 2023-10-07T00:24:16 pubchem_compound-inchi_key
+> 2023-10-14T00:23:20 pubchem_compound-inchi_key
 ### Update TTL for pubchem_pathway-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_pathway-ncbigene.ttl is older than output/tsv/pubchem_pathway-ncbigene.tsv
 ## Convert output/tsv/pubchem_pathway-ncbigene.tsv => output/ttl/pubchem_pathway-ncbigene.ttl
-< 2023-10-07T00:24:16 pubchem_pathway-ncbigene
+< 2023-10-14T00:23:20 pubchem_pathway-ncbigene
 togoid-config config/pubchem_pathway-ncbigene convert
-> 2023-10-07T00:24:17 pubchem_pathway-ncbigene
+> 2023-10-14T00:23:20 pubchem_pathway-ncbigene
 ### Update TTL for pubchem_pathway-pathbank if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_pathway-pathbank.ttl is older than output/tsv/pubchem_pathway-pathbank.tsv
 ## Convert output/tsv/pubchem_pathway-pathbank.tsv => output/ttl/pubchem_pathway-pathbank.ttl
-< 2023-10-07T00:24:17 pubchem_pathway-pathbank
+< 2023-10-14T00:23:20 pubchem_pathway-pathbank
 togoid-config config/pubchem_pathway-pathbank convert
-> 2023-10-07T00:24:18 pubchem_pathway-pathbank
+> 2023-10-14T00:23:21 pubchem_pathway-pathbank
 ### Update TTL for pubchem_pathway-pubchem_compound if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_pathway-pubchem_compound.ttl is older than output/tsv/pubchem_pathway-pubchem_compound.tsv
 ## Convert output/tsv/pubchem_pathway-pubchem_compound.tsv => output/ttl/pubchem_pathway-pubchem_compound.ttl
-< 2023-10-07T00:24:18 pubchem_pathway-pubchem_compound
+< 2023-10-14T00:23:21 pubchem_pathway-pubchem_compound
 togoid-config config/pubchem_pathway-pubchem_compound convert
-> 2023-10-07T00:24:27 pubchem_pathway-pubchem_compound
+> 2023-10-14T00:23:30 pubchem_pathway-pubchem_compound
 ### Update TTL for pubchem_pathway-reactome_pathway if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_pathway-reactome_pathway.ttl is older than output/tsv/pubchem_pathway-reactome_pathway.tsv
 ## Convert output/tsv/pubchem_pathway-reactome_pathway.tsv => output/ttl/pubchem_pathway-reactome_pathway.ttl
-< 2023-10-07T00:24:27 pubchem_pathway-reactome_pathway
+< 2023-10-14T00:23:30 pubchem_pathway-reactome_pathway
 togoid-config config/pubchem_pathway-reactome_pathway convert
-> 2023-10-07T00:24:28 pubchem_pathway-reactome_pathway
+> 2023-10-14T00:23:30 pubchem_pathway-reactome_pathway
 ### Update TTL for pubchem_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_pathway-uniprot.ttl is older than output/tsv/pubchem_pathway-uniprot.tsv
 ## Convert output/tsv/pubchem_pathway-uniprot.tsv => output/ttl/pubchem_pathway-uniprot.ttl
-< 2023-10-07T00:24:28 pubchem_pathway-uniprot
+< 2023-10-14T00:23:30 pubchem_pathway-uniprot
 togoid-config config/pubchem_pathway-uniprot convert
-> 2023-10-07T00:24:33 pubchem_pathway-uniprot
+> 2023-10-14T00:23:35 pubchem_pathway-uniprot
 ### Update TTL for pubchem_pathway-wikipathways if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/pubchem_pathway-wikipathways.ttl is older than output/tsv/pubchem_pathway-wikipathways.tsv
 ## Convert output/tsv/pubchem_pathway-wikipathways.tsv => output/ttl/pubchem_pathway-wikipathways.ttl
-< 2023-10-07T00:24:33 pubchem_pathway-wikipathways
+< 2023-10-14T00:23:35 pubchem_pathway-wikipathways
 togoid-config config/pubchem_pathway-wikipathways convert
-> 2023-10-07T00:24:33 pubchem_pathway-wikipathways
+> 2023-10-14T00:23:35 pubchem_pathway-wikipathways
 ### Update TTL for reactome_pathway-chebi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_pathway-chebi.ttl is older than output/tsv/reactome_pathway-chebi.tsv
 ## Convert output/tsv/reactome_pathway-chebi.tsv => output/ttl/reactome_pathway-chebi.ttl
-< 2023-10-07T00:24:33 reactome_pathway-chebi
+< 2023-10-14T00:23:35 reactome_pathway-chebi
 togoid-config config/reactome_pathway-chebi convert
-> 2023-10-07T00:24:36 reactome_pathway-chebi
+> 2023-10-14T00:23:38 reactome_pathway-chebi
 ### Update TTL for reactome_pathway-go if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_pathway-go.ttl is older than output/tsv/reactome_pathway-go.tsv
 ## Convert output/tsv/reactome_pathway-go.tsv => output/ttl/reactome_pathway-go.ttl
-< 2023-10-07T00:24:36 reactome_pathway-go
+< 2023-10-14T00:23:38 reactome_pathway-go
 togoid-config config/reactome_pathway-go convert
-> 2023-10-07T00:24:36 reactome_pathway-go
+> 2023-10-14T00:23:38 reactome_pathway-go
 ### Update TTL for reactome_pathway-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_pathway-iuphar_ligand.ttl is older than output/tsv/reactome_pathway-iuphar_ligand.tsv
 ## Convert output/tsv/reactome_pathway-iuphar_ligand.tsv => output/ttl/reactome_pathway-iuphar_ligand.ttl
-< 2023-10-07T00:24:36 reactome_pathway-iuphar_ligand
+< 2023-10-14T00:23:38 reactome_pathway-iuphar_ligand
 togoid-config config/reactome_pathway-iuphar_ligand convert
-> 2023-10-07T00:24:37 reactome_pathway-iuphar_ligand
+> 2023-10-14T00:23:39 reactome_pathway-iuphar_ligand
 ### Update TTL for reactome_pathway-mirbase if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_pathway-mirbase.ttl is older than output/tsv/reactome_pathway-mirbase.tsv
 ## Convert output/tsv/reactome_pathway-mirbase.tsv => output/ttl/reactome_pathway-mirbase.ttl
-< 2023-10-07T00:24:37 reactome_pathway-mirbase
+< 2023-10-14T00:23:39 reactome_pathway-mirbase
 togoid-config config/reactome_pathway-mirbase convert
-> 2023-10-07T00:24:37 reactome_pathway-mirbase
+> 2023-10-14T00:23:39 reactome_pathway-mirbase
 ### Update TTL for reactome_pathway-reactome_reaction if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_pathway-reactome_reaction.ttl is older than output/tsv/reactome_pathway-reactome_reaction.tsv
 ## Convert output/tsv/reactome_pathway-reactome_reaction.tsv => output/ttl/reactome_pathway-reactome_reaction.ttl
-< 2023-10-07T00:24:37 reactome_pathway-reactome_reaction
+< 2023-10-14T00:23:39 reactome_pathway-reactome_reaction
 togoid-config config/reactome_pathway-reactome_reaction convert
-> 2023-10-07T00:24:41 reactome_pathway-reactome_reaction
+> 2023-10-14T00:23:43 reactome_pathway-reactome_reaction
 ### Update TTL for reactome_pathway-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_pathway-uniprot.ttl is older than output/tsv/reactome_pathway-uniprot.tsv
 ## Convert output/tsv/reactome_pathway-uniprot.tsv => output/ttl/reactome_pathway-uniprot.ttl
-< 2023-10-07T00:24:41 reactome_pathway-uniprot
+< 2023-10-14T00:23:43 reactome_pathway-uniprot
 togoid-config config/reactome_pathway-uniprot convert
-> 2023-10-07T00:24:48 reactome_pathway-uniprot
+> 2023-10-14T00:23:50 reactome_pathway-uniprot
 ### Update TTL for reactome_reaction-chebi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_reaction-chebi.ttl is older than output/tsv/reactome_reaction-chebi.tsv
 ## Convert output/tsv/reactome_reaction-chebi.tsv => output/ttl/reactome_reaction-chebi.ttl
-< 2023-10-07T00:24:48 reactome_reaction-chebi
+< 2023-10-14T00:23:50 reactome_reaction-chebi
 togoid-config config/reactome_reaction-chebi convert
-> 2023-10-07T00:24:50 reactome_reaction-chebi
+> 2023-10-14T00:23:52 reactome_reaction-chebi
 ### Update TTL for reactome_reaction-go if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_reaction-go.ttl is older than output/tsv/reactome_reaction-go.tsv
 ## Convert output/tsv/reactome_reaction-go.tsv => output/ttl/reactome_reaction-go.ttl
-< 2023-10-07T00:24:50 reactome_reaction-go
+< 2023-10-14T00:23:52 reactome_reaction-go
 togoid-config config/reactome_reaction-go convert
-> 2023-10-07T00:24:51 reactome_reaction-go
+> 2023-10-14T00:23:52 reactome_reaction-go
 ### Update TTL for reactome_reaction-iuphar_ligand if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_reaction-iuphar_ligand.ttl is older than output/tsv/reactome_reaction-iuphar_ligand.tsv
 ## Convert output/tsv/reactome_reaction-iuphar_ligand.tsv => output/ttl/reactome_reaction-iuphar_ligand.ttl
-< 2023-10-07T00:24:51 reactome_reaction-iuphar_ligand
+< 2023-10-14T00:23:52 reactome_reaction-iuphar_ligand
 togoid-config config/reactome_reaction-iuphar_ligand convert
-> 2023-10-07T00:24:51 reactome_reaction-iuphar_ligand
+> 2023-10-14T00:23:53 reactome_reaction-iuphar_ligand
 ### Update TTL for reactome_reaction-mirbase if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_reaction-mirbase.ttl is older than output/tsv/reactome_reaction-mirbase.tsv
 ## Convert output/tsv/reactome_reaction-mirbase.tsv => output/ttl/reactome_reaction-mirbase.ttl
-< 2023-10-07T00:24:51 reactome_reaction-mirbase
+< 2023-10-14T00:23:53 reactome_reaction-mirbase
 togoid-config config/reactome_reaction-mirbase convert
-> 2023-10-07T00:24:51 reactome_reaction-mirbase
+> 2023-10-14T00:23:53 reactome_reaction-mirbase
 ### Update TTL for reactome_reaction-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/reactome_reaction-uniprot.ttl is older than output/tsv/reactome_reaction-uniprot.tsv
 ## Convert output/tsv/reactome_reaction-uniprot.tsv => output/ttl/reactome_reaction-uniprot.ttl
-< 2023-10-07T00:24:51 reactome_reaction-uniprot
+< 2023-10-14T00:23:53 reactome_reaction-uniprot
 togoid-config config/reactome_reaction-uniprot convert
-> 2023-10-07T00:24:57 reactome_reaction-uniprot
+> 2023-10-14T00:23:59 reactome_reaction-uniprot
 ### Update TTL for refseq_protein-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/refseq_protein-uniprot.ttl is older than output/tsv/refseq_protein-uniprot.tsv
 ## Convert output/tsv/refseq_protein-uniprot.tsv => output/ttl/refseq_protein-uniprot.ttl
-< 2023-10-07T00:24:57 refseq_protein-uniprot
+< 2023-10-14T00:23:59 refseq_protein-uniprot
 togoid-config config/refseq_protein-uniprot convert
-> 2023-10-07T01:51:31 refseq_protein-uniprot
+> 2023-10-14T01:28:00 refseq_protein-uniprot
 ### Update TTL for refseq_rna-dbsnp if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/refseq_rna-dbsnp.ttl is newer than output/tsv/refseq_rna-dbsnp.tsv
 # => Preserving output/ttl/refseq_rna-dbsnp.ttl
@@ -4756,189 +4858,189 @@ togoid-config config/refseq_protein-uniprot convert
 ### Update TTL for sra_accession-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_accession-bioproject.ttl is older than output/tsv/sra_accession-bioproject.tsv
 ## Convert output/tsv/sra_accession-bioproject.tsv => output/ttl/sra_accession-bioproject.ttl
-< 2023-10-07T01:51:31 sra_accession-bioproject
+< 2023-10-14T01:28:00 sra_accession-bioproject
 togoid-config config/sra_accession-bioproject convert
-> 2023-10-07T01:51:36 sra_accession-bioproject
+> 2023-10-14T01:28:05 sra_accession-bioproject
 ### Update TTL for sra_accession-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_accession-biosample.ttl is older than output/tsv/sra_accession-biosample.tsv
 ## Convert output/tsv/sra_accession-biosample.tsv => output/ttl/sra_accession-biosample.ttl
-< 2023-10-07T01:51:36 sra_accession-biosample
+< 2023-10-14T01:28:05 sra_accession-biosample
 togoid-config config/sra_accession-biosample convert
-> 2023-10-07T01:56:06 sra_accession-biosample
+> 2023-10-14T01:32:29 sra_accession-biosample
 ### Update TTL for sra_accession-sra_analysis if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_accession-sra_analysis.ttl is older than output/tsv/sra_accession-sra_analysis.tsv
 ## Convert output/tsv/sra_accession-sra_analysis.tsv => output/ttl/sra_accession-sra_analysis.ttl
-< 2023-10-07T01:56:06 sra_accession-sra_analysis
+< 2023-10-14T01:32:29 sra_accession-sra_analysis
 togoid-config config/sra_accession-sra_analysis convert
-> 2023-10-07T01:56:09 sra_accession-sra_analysis
+> 2023-10-14T01:32:31 sra_accession-sra_analysis
 ### Update TTL for sra_accession-sra_experiment if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_accession-sra_experiment.ttl is older than output/tsv/sra_accession-sra_experiment.tsv
 ## Convert output/tsv/sra_accession-sra_experiment.tsv => output/ttl/sra_accession-sra_experiment.ttl
-< 2023-10-07T01:56:09 sra_accession-sra_experiment
+< 2023-10-14T01:32:31 sra_accession-sra_experiment
 togoid-config config/sra_accession-sra_experiment convert
-> 2023-10-07T02:00:42 sra_accession-sra_experiment
+> 2023-10-14T01:37:25 sra_accession-sra_experiment
 ### Update TTL for sra_accession-sra_project if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_accession-sra_project.ttl is older than output/tsv/sra_accession-sra_project.tsv
 ## Convert output/tsv/sra_accession-sra_project.tsv => output/ttl/sra_accession-sra_project.ttl
-< 2023-10-07T02:00:42 sra_accession-sra_project
+< 2023-10-14T01:37:25 sra_accession-sra_project
 togoid-config config/sra_accession-sra_project convert
-> 2023-10-07T02:00:46 sra_accession-sra_project
+> 2023-10-14T01:37:30 sra_accession-sra_project
 ### Update TTL for sra_accession-sra_run if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_accession-sra_run.ttl is older than output/tsv/sra_accession-sra_run.tsv
 ## Convert output/tsv/sra_accession-sra_run.tsv => output/ttl/sra_accession-sra_run.ttl
-< 2023-10-07T02:00:46 sra_accession-sra_run
+< 2023-10-14T01:37:30 sra_accession-sra_run
 togoid-config config/sra_accession-sra_run convert
-> 2023-10-07T02:06:13 sra_accession-sra_run
+> 2023-10-14T01:43:23 sra_accession-sra_run
 ### Update TTL for sra_accession-sra_sample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_accession-sra_sample.ttl is older than output/tsv/sra_accession-sra_sample.tsv
 ## Convert output/tsv/sra_accession-sra_sample.tsv => output/ttl/sra_accession-sra_sample.ttl
-< 2023-10-07T02:06:13 sra_accession-sra_sample
+< 2023-10-14T01:43:23 sra_accession-sra_sample
 togoid-config config/sra_accession-sra_sample convert
-> 2023-10-07T02:10:47 sra_accession-sra_sample
+> 2023-10-14T01:47:59 sra_accession-sra_sample
 ### Update TTL for sra_experiment-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_experiment-bioproject.ttl is older than output/tsv/sra_experiment-bioproject.tsv
 ## Convert output/tsv/sra_experiment-bioproject.tsv => output/ttl/sra_experiment-bioproject.ttl
-< 2023-10-07T02:10:47 sra_experiment-bioproject
+< 2023-10-14T01:47:59 sra_experiment-bioproject
 togoid-config config/sra_experiment-bioproject convert
-> 2023-10-07T02:15:19 sra_experiment-bioproject
+> 2023-10-14T01:52:01 sra_experiment-bioproject
 ### Update TTL for sra_experiment-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_experiment-biosample.ttl is older than output/tsv/sra_experiment-biosample.tsv
 ## Convert output/tsv/sra_experiment-biosample.tsv => output/ttl/sra_experiment-biosample.ttl
-< 2023-10-07T02:15:19 sra_experiment-biosample
+< 2023-10-14T01:52:01 sra_experiment-biosample
 togoid-config config/sra_experiment-biosample convert
-> 2023-10-07T02:19:24 sra_experiment-biosample
+> 2023-10-14T01:56:02 sra_experiment-biosample
 ### Update TTL for sra_experiment-sra_project if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_experiment-sra_project.ttl is older than output/tsv/sra_experiment-sra_project.tsv
 ## Convert output/tsv/sra_experiment-sra_project.tsv => output/ttl/sra_experiment-sra_project.ttl
-< 2023-10-07T02:19:24 sra_experiment-sra_project
+< 2023-10-14T01:56:02 sra_experiment-sra_project
 togoid-config config/sra_experiment-sra_project convert
-> 2023-10-07T02:23:48 sra_experiment-sra_project
+> 2023-10-14T02:00:20 sra_experiment-sra_project
 ### Update TTL for sra_experiment-sra_sample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_experiment-sra_sample.ttl is older than output/tsv/sra_experiment-sra_sample.tsv
 ## Convert output/tsv/sra_experiment-sra_sample.tsv => output/ttl/sra_experiment-sra_sample.ttl
-< 2023-10-07T02:23:48 sra_experiment-sra_sample
+< 2023-10-14T02:00:20 sra_experiment-sra_sample
 togoid-config config/sra_experiment-sra_sample convert
-> 2023-10-07T02:28:46 sra_experiment-sra_sample
+> 2023-10-14T02:04:59 sra_experiment-sra_sample
 ### Update TTL for sra_project-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_project-bioproject.ttl is older than output/tsv/sra_project-bioproject.tsv
 ## Convert output/tsv/sra_project-bioproject.tsv => output/ttl/sra_project-bioproject.ttl
-< 2023-10-07T02:28:46 sra_project-bioproject
+< 2023-10-14T02:04:59 sra_project-bioproject
 togoid-config config/sra_project-bioproject convert
-> 2023-10-07T02:28:50 sra_project-bioproject
+> 2023-10-14T02:05:03 sra_project-bioproject
 ### Update TTL for sra_run-bioproject if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_run-bioproject.ttl is older than output/tsv/sra_run-bioproject.tsv
 ## Convert output/tsv/sra_run-bioproject.tsv => output/ttl/sra_run-bioproject.ttl
-< 2023-10-07T02:28:50 sra_run-bioproject
+< 2023-10-14T02:05:03 sra_run-bioproject
 togoid-config config/sra_run-bioproject convert
-> 2023-10-07T02:32:30 sra_run-bioproject
+> 2023-10-14T02:09:27 sra_run-bioproject
 ### Update TTL for sra_run-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_run-biosample.ttl is older than output/tsv/sra_run-biosample.tsv
 ## Convert output/tsv/sra_run-biosample.tsv => output/ttl/sra_run-biosample.ttl
-< 2023-10-07T02:32:30 sra_run-biosample
+< 2023-10-14T02:09:27 sra_run-biosample
 togoid-config config/sra_run-biosample convert
-> 2023-10-07T02:36:46 sra_run-biosample
+> 2023-10-14T02:13:52 sra_run-biosample
 ### Update TTL for sra_run-sra_experiment if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_run-sra_experiment.ttl is older than output/tsv/sra_run-sra_experiment.tsv
 ## Convert output/tsv/sra_run-sra_experiment.tsv => output/ttl/sra_run-sra_experiment.ttl
-< 2023-10-07T02:36:46 sra_run-sra_experiment
+< 2023-10-14T02:13:52 sra_run-sra_experiment
 togoid-config config/sra_run-sra_experiment convert
-> 2023-10-07T02:40:35 sra_run-sra_experiment
+> 2023-10-14T02:17:42 sra_run-sra_experiment
 ### Update TTL for sra_run-sra_project if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_run-sra_project.ttl is older than output/tsv/sra_run-sra_project.tsv
 ## Convert output/tsv/sra_run-sra_project.tsv => output/ttl/sra_run-sra_project.ttl
-< 2023-10-07T02:40:35 sra_run-sra_project
+< 2023-10-14T02:17:42 sra_run-sra_project
 togoid-config config/sra_run-sra_project convert
-> 2023-10-07T02:44:43 sra_run-sra_project
+> 2023-10-14T02:21:42 sra_run-sra_project
 ### Update TTL for sra_run-sra_sample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_run-sra_sample.ttl is older than output/tsv/sra_run-sra_sample.tsv
 ## Convert output/tsv/sra_run-sra_sample.tsv => output/ttl/sra_run-sra_sample.ttl
-< 2023-10-07T02:44:43 sra_run-sra_sample
+< 2023-10-14T02:21:42 sra_run-sra_sample
 togoid-config config/sra_run-sra_sample convert
-> 2023-10-07T02:48:29 sra_run-sra_sample
+> 2023-10-14T02:25:38 sra_run-sra_sample
 ### Update TTL for sra_sample-biosample if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/sra_sample-biosample.ttl is older than output/tsv/sra_sample-biosample.tsv
 ## Convert output/tsv/sra_sample-biosample.tsv => output/ttl/sra_sample-biosample.ttl
-< 2023-10-07T02:48:29 sra_sample-biosample
+< 2023-10-14T02:25:38 sra_sample-biosample
 togoid-config config/sra_sample-biosample convert
-> 2023-10-07T02:52:32 sra_sample-biosample
+> 2023-10-14T02:29:36 sra_sample-biosample
 ### Update TTL for swisslipids-chebi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/swisslipids-chebi.ttl is older than output/tsv/swisslipids-chebi.tsv
 ## Convert output/tsv/swisslipids-chebi.tsv => output/ttl/swisslipids-chebi.ttl
-< 2023-10-07T02:52:32 swisslipids-chebi
+< 2023-10-14T02:29:36 swisslipids-chebi
 togoid-config config/swisslipids-chebi convert
-> 2023-10-07T02:52:32 swisslipids-chebi
+> 2023-10-14T02:29:37 swisslipids-chebi
 ### Update TTL for swisslipids-hmdb if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/swisslipids-hmdb.ttl is older than output/tsv/swisslipids-hmdb.tsv
 ## Convert output/tsv/swisslipids-hmdb.tsv => output/ttl/swisslipids-hmdb.ttl
-< 2023-10-07T02:52:32 swisslipids-hmdb
+< 2023-10-14T02:29:37 swisslipids-hmdb
 togoid-config config/swisslipids-hmdb convert
-> 2023-10-07T02:52:32 swisslipids-hmdb
+> 2023-10-14T02:29:37 swisslipids-hmdb
 ### Update TTL for swisslipids-inchi_key if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/swisslipids-inchi_key.ttl is older than output/tsv/swisslipids-inchi_key.tsv
 ## Convert output/tsv/swisslipids-inchi_key.tsv => output/ttl/swisslipids-inchi_key.ttl
-< 2023-10-07T02:52:32 swisslipids-inchi_key
+< 2023-10-14T02:29:37 swisslipids-inchi_key
 togoid-config config/swisslipids-inchi_key convert
-> 2023-10-07T02:52:38 swisslipids-inchi_key
+> 2023-10-14T02:29:43 swisslipids-inchi_key
 ### Update TTL for taxonomy-pubmed if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/taxonomy-pubmed.ttl is older than output/tsv/taxonomy-pubmed.tsv
 ## Convert output/tsv/taxonomy-pubmed.tsv => output/ttl/taxonomy-pubmed.ttl
-< 2023-10-07T02:52:38 taxonomy-pubmed
+< 2023-10-14T02:29:43 taxonomy-pubmed
 togoid-config config/taxonomy-pubmed convert
-> 2023-10-07T02:52:39 taxonomy-pubmed
+> 2023-10-14T02:29:43 taxonomy-pubmed
 ### Update TTL for togovar-clinvar if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-clinvar.ttl is older than output/tsv/togovar-clinvar.tsv
 ## Convert output/tsv/togovar-clinvar.tsv => output/ttl/togovar-clinvar.ttl
-< 2023-10-07T02:52:39 togovar-clinvar
+< 2023-10-14T02:29:43 togovar-clinvar
 togoid-config config/togovar-clinvar convert
-> 2023-10-07T02:52:45 togovar-clinvar
+> 2023-10-14T02:29:49 togovar-clinvar
 ### Update TTL for togovar-dbsnp if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-dbsnp.ttl is older than output/tsv/togovar-dbsnp.tsv
 ## Convert output/tsv/togovar-dbsnp.tsv => output/ttl/togovar-dbsnp.ttl
-< 2023-10-07T02:52:45 togovar-dbsnp
+< 2023-10-14T02:29:49 togovar-dbsnp
 togoid-config config/togovar-dbsnp convert
-> 2023-10-07T03:04:41 togovar-dbsnp
+> 2023-10-14T02:41:31 togovar-dbsnp
 ### Update TTL for togovar-ensembl_gene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-ensembl_gene.ttl is older than output/tsv/togovar-ensembl_gene.tsv
 ## Convert output/tsv/togovar-ensembl_gene.tsv => output/ttl/togovar-ensembl_gene.ttl
-< 2023-10-07T03:04:41 togovar-ensembl_gene
+< 2023-10-14T02:41:31 togovar-ensembl_gene
 togoid-config config/togovar-ensembl_gene convert
-> 2023-10-07T03:21:22 togovar-ensembl_gene
+> 2023-10-14T02:59:09 togovar-ensembl_gene
 ### Update TTL for togovar-ensembl_transcript if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-ensembl_transcript.ttl is older than output/tsv/togovar-ensembl_transcript.tsv
 ## Convert output/tsv/togovar-ensembl_transcript.tsv => output/ttl/togovar-ensembl_transcript.ttl
-< 2023-10-07T03:21:22 togovar-ensembl_transcript
+< 2023-10-14T02:59:09 togovar-ensembl_transcript
 togoid-config config/togovar-ensembl_transcript convert
-> 2023-10-07T04:11:12 togovar-ensembl_transcript
+> 2023-10-14T05:32:26 togovar-ensembl_transcript
 ### Update TTL for togovar-hgnc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-hgnc.ttl is older than output/tsv/togovar-hgnc.tsv
 ## Convert output/tsv/togovar-hgnc.tsv => output/ttl/togovar-hgnc.ttl
-< 2023-10-07T04:11:12 togovar-hgnc
+< 2023-10-14T05:32:26 togovar-hgnc
 togoid-config config/togovar-hgnc convert
-> 2023-10-07T04:20:53 togovar-hgnc
+> 2023-10-14T05:41:49 togovar-hgnc
 ### Update TTL for togovar-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-ncbigene.ttl is older than output/tsv/togovar-ncbigene.tsv
 ## Convert output/tsv/togovar-ncbigene.tsv => output/ttl/togovar-ncbigene.ttl
-< 2023-10-07T04:20:53 togovar-ncbigene
+< 2023-10-14T05:41:49 togovar-ncbigene
 togoid-config config/togovar-ncbigene convert
-> 2023-10-07T04:30:42 togovar-ncbigene
+> 2023-10-14T05:51:19 togovar-ncbigene
 ### Update TTL for togovar-pubmed if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-pubmed.ttl is older than output/tsv/togovar-pubmed.tsv
 ## Convert output/tsv/togovar-pubmed.tsv => output/ttl/togovar-pubmed.ttl
-< 2023-10-07T04:30:42 togovar-pubmed
+< 2023-10-14T05:51:19 togovar-pubmed
 togoid-config config/togovar-pubmed convert
-> 2023-10-07T04:30:48 togovar-pubmed
+> 2023-10-14T05:51:25 togovar-pubmed
 ### Update TTL for togovar-refseq_rna if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/togovar-refseq_rna.ttl is older than output/tsv/togovar-refseq_rna.tsv
 ## Convert output/tsv/togovar-refseq_rna.tsv => output/ttl/togovar-refseq_rna.ttl
-< 2023-10-07T04:30:48 togovar-refseq_rna
+< 2023-10-14T05:51:25 togovar-refseq_rna
 togoid-config config/togovar-refseq_rna convert
-> 2023-10-07T05:15:44 togovar-refseq_rna
+> 2023-10-14T06:15:45 togovar-refseq_rna
 ### Update TTL for uberon-ncit_tissue if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/uberon-ncit_tissue.ttl is older than output/tsv/uberon-ncit_tissue.tsv
 ## Convert output/tsv/uberon-ncit_tissue.tsv => output/ttl/uberon-ncit_tissue.ttl
-< 2023-10-07T05:15:44 uberon-ncit_tissue
+< 2023-10-14T06:15:45 uberon-ncit_tissue
 togoid-config config/uberon-ncit_tissue convert
-> 2023-10-07T05:15:44 uberon-ncit_tissue
+> 2023-10-14T06:15:45 uberon-ncit_tissue
 ### Update TTL for uniprot-chembl_target if check_ttl_filesize false or check_ttl_timestamp false
 # File output/ttl/uniprot-chembl_target.ttl is newer than output/tsv/uniprot-chembl_target.tsv
 # => Preserving output/ttl/uniprot-chembl_target.ttl
@@ -4999,68 +5101,68 @@ togoid-config config/uberon-ncit_tissue convert
 ### Update TTL for uniprot_reference_proteome-assembly_insdc if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/uniprot_reference_proteome-assembly_insdc.ttl is older than output/tsv/uniprot_reference_proteome-assembly_insdc.tsv
 ## Convert output/tsv/uniprot_reference_proteome-assembly_insdc.tsv => output/ttl/uniprot_reference_proteome-assembly_insdc.ttl
-< 2023-10-07T05:15:44 uniprot_reference_proteome-assembly_insdc
+< 2023-10-14T06:15:45 uniprot_reference_proteome-assembly_insdc
 togoid-config config/uniprot_reference_proteome-assembly_insdc convert
-> 2023-10-07T05:15:49 uniprot_reference_proteome-assembly_insdc
+> 2023-10-14T06:15:50 uniprot_reference_proteome-assembly_insdc
 ### Update TTL for uniprot_reference_proteome-assembly_refseq if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/uniprot_reference_proteome-assembly_refseq.ttl is older than output/tsv/uniprot_reference_proteome-assembly_refseq.tsv
 ## Convert output/tsv/uniprot_reference_proteome-assembly_refseq.tsv => output/ttl/uniprot_reference_proteome-assembly_refseq.ttl
-< 2023-10-07T05:15:49 uniprot_reference_proteome-assembly_refseq
+< 2023-10-14T06:15:50 uniprot_reference_proteome-assembly_refseq
 togoid-config config/uniprot_reference_proteome-assembly_refseq convert
-> 2023-10-07T05:15:49 uniprot_reference_proteome-assembly_refseq
+> 2023-10-14T06:15:50 uniprot_reference_proteome-assembly_refseq
 ### Update TTL for uniprot_reference_proteome-taxonomy if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/uniprot_reference_proteome-taxonomy.ttl is older than output/tsv/uniprot_reference_proteome-taxonomy.tsv
 ## Convert output/tsv/uniprot_reference_proteome-taxonomy.tsv => output/ttl/uniprot_reference_proteome-taxonomy.ttl
-< 2023-10-07T05:15:49 uniprot_reference_proteome-taxonomy
+< 2023-10-14T06:15:50 uniprot_reference_proteome-taxonomy
 togoid-config config/uniprot_reference_proteome-taxonomy convert
-> 2023-10-07T05:15:53 uniprot_reference_proteome-taxonomy
+> 2023-10-14T06:15:54 uniprot_reference_proteome-taxonomy
 ### Update TTL for wikipathways-chebi if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/wikipathways-chebi.ttl is older than output/tsv/wikipathways-chebi.tsv
 ## Convert output/tsv/wikipathways-chebi.tsv => output/ttl/wikipathways-chebi.ttl
-< 2023-10-07T05:15:53 wikipathways-chebi
+< 2023-10-14T06:15:54 wikipathways-chebi
 togoid-config config/wikipathways-chebi convert
-> 2023-10-07T05:15:53 wikipathways-chebi
+> 2023-10-14T06:15:55 wikipathways-chebi
 ### Update TTL for wikipathways-doid if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/wikipathways-doid.ttl is older than output/tsv/wikipathways-doid.tsv
 ## Convert output/tsv/wikipathways-doid.tsv => output/ttl/wikipathways-doid.ttl
-< 2023-10-07T05:15:53 wikipathways-doid
+< 2023-10-14T06:15:55 wikipathways-doid
 togoid-config config/wikipathways-doid convert
-> 2023-10-07T05:15:54 wikipathways-doid
+> 2023-10-14T06:15:55 wikipathways-doid
 ### Update TTL for wikipathways-hmdb if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/wikipathways-hmdb.ttl is older than output/tsv/wikipathways-hmdb.tsv
 ## Convert output/tsv/wikipathways-hmdb.tsv => output/ttl/wikipathways-hmdb.ttl
-< 2023-10-07T05:15:54 wikipathways-hmdb
+< 2023-10-14T06:15:55 wikipathways-hmdb
 togoid-config config/wikipathways-hmdb convert
-> 2023-10-07T05:15:54 wikipathways-hmdb
+> 2023-10-14T06:15:55 wikipathways-hmdb
 ### Update TTL for wikipathways-lipidmaps if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/wikipathways-lipidmaps.ttl is older than output/tsv/wikipathways-lipidmaps.tsv
 ## Convert output/tsv/wikipathways-lipidmaps.tsv => output/ttl/wikipathways-lipidmaps.ttl
-< 2023-10-07T05:15:54 wikipathways-lipidmaps
+< 2023-10-14T06:15:55 wikipathways-lipidmaps
 togoid-config config/wikipathways-lipidmaps convert
-> 2023-10-07T05:15:54 wikipathways-lipidmaps
+> 2023-10-14T06:15:55 wikipathways-lipidmaps
 ### Update TTL for wikipathways-ncbigene if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/wikipathways-ncbigene.ttl is older than output/tsv/wikipathways-ncbigene.tsv
 ## Convert output/tsv/wikipathways-ncbigene.tsv => output/ttl/wikipathways-ncbigene.ttl
-< 2023-10-07T05:15:54 wikipathways-ncbigene
+< 2023-10-14T06:15:55 wikipathways-ncbigene
 togoid-config config/wikipathways-ncbigene convert
-> 2023-10-07T05:15:55 wikipathways-ncbigene
+> 2023-10-14T06:15:56 wikipathways-ncbigene
 ### Update TTL for wikipathways-uniprot if check_ttl_filesize false or check_ttl_timestamp true
 # File output/ttl/wikipathways-uniprot.ttl is older than output/tsv/wikipathways-uniprot.tsv
 ## Convert output/tsv/wikipathways-uniprot.tsv => output/ttl/wikipathways-uniprot.ttl
-< 2023-10-07T05:15:55 wikipathways-uniprot
+< 2023-10-14T06:15:56 wikipathways-uniprot
 togoid-config config/wikipathways-uniprot convert
-> 2023-10-07T05:15:55 wikipathways-uniprot
+> 2023-10-14T06:15:56 wikipathways-uniprot
 Rule for TTL (output/ttl/bioproject-biosample.ttl)
 ------------------------------
 Investigating output/ttl/bioproject-biosample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:58:46 +0900
+timestamp: 2023-10-13 21:05:24 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/bioproject-biosample.tsv (2023-10-06 17:40:43 +0900)
-latest-prerequisite time: 2023-10-06 17:40:43 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/bioproject-biosample.tsv (2023-10-13 17:40:37 +0900)
+latest-prerequisite time: 2023-10-13 17:40:37 +0900
 ................................
 
 Rule for TTL (output/ttl/bioproject-geo_series.ttl)
@@ -5068,12 +5170,12 @@ Rule for TTL (output/ttl/bioproject-geo_series.ttl)
 Investigating output/ttl/bioproject-geo_series.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:58:49 +0900
+timestamp: 2023-10-13 21:05:26 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/bioproject-geo_series.tsv (2023-10-06 17:40:45 +0900)
-latest-prerequisite time: 2023-10-06 17:40:45 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/bioproject-geo_series.tsv (2023-10-13 17:40:38 +0900)
+latest-prerequisite time: 2023-10-13 17:40:38 +0900
 ................................
 
 Rule for TTL (output/ttl/bioproject-pubmed.ttl)
@@ -5081,12 +5183,12 @@ Rule for TTL (output/ttl/bioproject-pubmed.ttl)
 Investigating output/ttl/bioproject-pubmed.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:58:51 +0900
+timestamp: 2023-10-13 21:05:28 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/bioproject-pubmed.tsv (2023-10-06 17:40:46 +0900)
-latest-prerequisite time: 2023-10-06 17:40:46 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/bioproject-pubmed.tsv (2023-10-13 17:40:39 +0900)
+latest-prerequisite time: 2023-10-13 17:40:39 +0900
 ................................
 
 Rule for TTL (output/ttl/bioproject_umbrella-bioproject.ttl)
@@ -5094,12 +5196,12 @@ Rule for TTL (output/ttl/bioproject_umbrella-bioproject.ttl)
 Investigating output/ttl/bioproject_umbrella-bioproject.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 20:58:52 +0900
+timestamp: 2023-10-13 21:05:29 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/bioproject_umbrella-bioproject.tsv (2023-10-06 17:40:47 +0900)
-latest-prerequisite time: 2023-10-06 17:40:47 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/bioproject_umbrella-bioproject.tsv (2023-10-13 17:40:40 +0900)
+latest-prerequisite time: 2023-10-13 17:40:40 +0900
 ................................
 
 Rule for TTL (output/ttl/cellosaurus-ncit_disease.ttl)
@@ -5110,9 +5212,9 @@ task needed: true
 timestamp: 2023-10-06 20:59:11 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
 --output/tsv/cellosaurus-ncit_disease.tsv (2023-10-06 17:40:53 +0900)
-latest-prerequisite time: 2023-10-06 17:40:53 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/cellosaurus-orphanet_phenotype.ttl)
@@ -5123,9 +5225,9 @@ task needed: true
 timestamp: 2023-10-06 20:59:12 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
 --output/tsv/cellosaurus-orphanet_phenotype.tsv (2023-10-06 17:40:56 +0900)
-latest-prerequisite time: 2023-10-06 17:40:56 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/chembl_target-ensembl_gene.ttl)
@@ -5137,8 +5239,8 @@ timestamp: 2023-08-25 22:09:29 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/chembl_target-ensembl_gene.tsv (2023-08-25 17:59:01 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/cog-insdc.ttl)
@@ -5150,8 +5252,8 @@ timestamp: 2023-07-28 22:03:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/cog-insdc.tsv (2023-07-28 17:55:29 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/cog-refseq_protein.ttl)
@@ -5163,8 +5265,8 @@ timestamp: 2023-07-28 22:03:44 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/cog-refseq_protein.tsv (2023-07-28 17:55:40 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_gene-affy_probeset.ttl)
@@ -5172,12 +5274,12 @@ Rule for TTL (output/ttl/ensembl_gene-affy_probeset.ttl)
 Investigating output/ttl/ensembl_gene-affy_probeset.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:00:47 +0900
+timestamp: 2023-10-13 21:07:25 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_gene-affy_probeset.tsv (2023-10-06 17:57:50 +0900)
-latest-prerequisite time: 2023-10-06 17:57:50 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_gene-affy_probeset.tsv (2023-10-13 17:58:04 +0900)
+latest-prerequisite time: 2023-10-13 17:58:04 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_gene-ensembl_protein.ttl)
@@ -5185,12 +5287,12 @@ Rule for TTL (output/ttl/ensembl_gene-ensembl_protein.ttl)
 Investigating output/ttl/ensembl_gene-ensembl_protein.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:02:37 +0900
+timestamp: 2023-10-13 21:09:14 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_gene-ensembl_protein.tsv (2023-10-06 17:59:41 +0900)
-latest-prerequisite time: 2023-10-06 17:59:41 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_gene-ensembl_protein.tsv (2023-10-13 18:00:02 +0900)
+latest-prerequisite time: 2023-10-13 18:00:02 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_gene-ensembl_transcript.ttl)
@@ -5198,12 +5300,12 @@ Rule for TTL (output/ttl/ensembl_gene-ensembl_transcript.ttl)
 Investigating output/ttl/ensembl_gene-ensembl_transcript.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:04:55 +0900
+timestamp: 2023-10-13 21:11:29 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_gene-ensembl_transcript.tsv (2023-10-06 18:01:40 +0900)
-latest-prerequisite time: 2023-10-06 18:01:40 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_gene-ensembl_transcript.tsv (2023-10-13 18:02:06 +0900)
+latest-prerequisite time: 2023-10-13 18:02:06 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_gene-hgnc.ttl)
@@ -5211,12 +5313,12 @@ Rule for TTL (output/ttl/ensembl_gene-hgnc.ttl)
 Investigating output/ttl/ensembl_gene-hgnc.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:04:56 +0900
+timestamp: 2023-10-13 21:11:31 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_gene-hgnc.tsv (2023-10-06 18:01:40 +0900)
-latest-prerequisite time: 2023-10-06 18:01:40 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_gene-hgnc.tsv (2023-10-13 18:02:07 +0900)
+latest-prerequisite time: 2023-10-13 18:02:07 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_gene-ncbigene.ttl)
@@ -5224,12 +5326,12 @@ Rule for TTL (output/ttl/ensembl_gene-ncbigene.ttl)
 Investigating output/ttl/ensembl_gene-ncbigene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:05:46 +0900
+timestamp: 2023-10-13 21:12:21 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_gene-ncbigene.tsv (2023-10-06 18:03:09 +0900)
-latest-prerequisite time: 2023-10-06 18:03:09 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_gene-ncbigene.tsv (2023-10-13 18:03:42 +0900)
+latest-prerequisite time: 2023-10-13 18:03:42 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_gene-uniprot.ttl)
@@ -5237,12 +5339,12 @@ Rule for TTL (output/ttl/ensembl_gene-uniprot.ttl)
 Investigating output/ttl/ensembl_gene-uniprot.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:06:27 +0900
+timestamp: 2023-10-13 21:13:02 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_gene-uniprot.tsv (2023-10-06 18:04:29 +0900)
-latest-prerequisite time: 2023-10-06 18:04:29 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_gene-uniprot.tsv (2023-10-13 18:05:10 +0900)
+latest-prerequisite time: 2023-10-13 18:05:10 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_protein-ensembl_transcript.ttl)
@@ -5250,12 +5352,12 @@ Rule for TTL (output/ttl/ensembl_protein-ensembl_transcript.ttl)
 Investigating output/ttl/ensembl_protein-ensembl_transcript.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:08:18 +0900
+timestamp: 2023-10-13 21:14:55 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_protein-ensembl_transcript.tsv (2023-10-06 18:06:21 +0900)
-latest-prerequisite time: 2023-10-06 18:06:21 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_protein-ensembl_transcript.tsv (2023-10-13 18:07:09 +0900)
+latest-prerequisite time: 2023-10-13 18:07:09 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_transcript-affy_probeset.ttl)
@@ -5263,12 +5365,12 @@ Rule for TTL (output/ttl/ensembl_transcript-affy_probeset.ttl)
 Investigating output/ttl/ensembl_transcript-affy_probeset.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:08:21 +0900
+timestamp: 2023-10-13 21:14:57 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_transcript-affy_probeset.tsv (2023-10-06 18:07:15 +0900)
-latest-prerequisite time: 2023-10-06 18:07:15 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_transcript-affy_probeset.tsv (2023-10-13 18:07:51 +0900)
+latest-prerequisite time: 2023-10-13 18:07:51 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_transcript-go.ttl)
@@ -5276,12 +5378,12 @@ Rule for TTL (output/ttl/ensembl_transcript-go.ttl)
 Investigating output/ttl/ensembl_transcript-go.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:19:02 +0900
+timestamp: 2023-10-13 21:25:43 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_transcript-go.tsv (2023-10-06 18:11:13 +0900)
-latest-prerequisite time: 2023-10-06 18:11:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_transcript-go.tsv (2023-10-13 18:11:53 +0900)
+latest-prerequisite time: 2023-10-13 18:11:53 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_transcript-hgnc.ttl)
@@ -5289,12 +5391,12 @@ Rule for TTL (output/ttl/ensembl_transcript-hgnc.ttl)
 Investigating output/ttl/ensembl_transcript-hgnc.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:19:06 +0900
+timestamp: 2023-10-13 21:25:46 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_transcript-hgnc.tsv (2023-10-06 18:11:14 +0900)
-latest-prerequisite time: 2023-10-06 18:11:14 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_transcript-hgnc.tsv (2023-10-13 18:11:54 +0900)
+latest-prerequisite time: 2023-10-13 18:11:54 +0900
 ................................
 
 Rule for TTL (output/ttl/ensembl_transcript-refseq_rna.ttl)
@@ -5302,12 +5404,38 @@ Rule for TTL (output/ttl/ensembl_transcript-refseq_rna.ttl)
 Investigating output/ttl/ensembl_transcript-refseq_rna.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 21:20:32 +0900
+timestamp: 2023-10-13 21:27:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ensembl_transcript-refseq_rna.tsv (2023-10-06 18:12:48 +0900)
-latest-prerequisite time: 2023-10-06 18:12:48 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ensembl_transcript-refseq_rna.tsv (2023-10-13 18:13:37 +0900)
+latest-prerequisite time: 2023-10-13 18:13:37 +0900
+................................
+
+Rule for TTL (output/ttl/hgnc-ccds.ttl)
+------------------------------
+Investigating output/ttl/hgnc-ccds.ttl
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-06 21:20:34 +0900
+pre-requisites: 
+--output/ttl/ (<EARLY TIME>)
+--output/tsv/hgnc-ccds.tsv (2023-10-06 18:13:01 +0900)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
+................................
+
+Rule for TTL (output/ttl/hgnc-pubmed.ttl)
+------------------------------
+Investigating output/ttl/hgnc-pubmed.ttl
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-06 21:20:38 +0900
+pre-requisites: 
+--output/ttl/ (<EARLY TIME>)
+--output/tsv/hgnc-pubmed.tsv (2023-10-06 18:13:07 +0900)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/hmdb-chebi.ttl)
@@ -5319,8 +5447,8 @@ timestamp: 2023-07-08 10:23:14 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/hmdb-chebi.tsv (2023-07-03 13:03:28 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/hmdb-inchi_key.ttl)
@@ -5332,8 +5460,8 @@ timestamp: 2023-07-08 10:23:16 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/hmdb-inchi_key.tsv (2023-07-03 13:03:51 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/hmdb-pdb_ccd.ttl)
@@ -5345,8 +5473,8 @@ timestamp: 2023-07-08 10:23:16 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/hmdb-pdb_ccd.tsv (2023-07-03 13:06:37 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/hmdb-pubchem_compound.ttl)
@@ -5358,8 +5486,8 @@ timestamp: 2023-07-08 10:23:17 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/hmdb-pubchem_compound.tsv (2023-07-03 13:06:27 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/homologene-ncbigene.ttl)
@@ -5371,8 +5499,8 @@ timestamp: 2023-06-02 20:54:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/homologene-ncbigene.tsv (2023-06-02 19:58:16 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/hp_inheritance-omim_phenotype.ttl)
@@ -5384,8 +5512,8 @@ timestamp: 2023-09-29 22:52:48 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/hp_inheritance-omim_phenotype.tsv (2023-09-29 18:14:52 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/hp_phenotype-ncbigene.ttl)
@@ -5397,8 +5525,8 @@ timestamp: 2023-09-18 09:06:00 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/hp_phenotype-ncbigene.tsv (2023-09-17 16:18:41 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/hp_phenotype-omim_phenotype.ttl)
@@ -5406,12 +5534,12 @@ Rule for TTL (output/ttl/hp_phenotype-omim_phenotype.ttl)
 Investigating output/ttl/hp_phenotype-omim_phenotype.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-09-18 09:06:01 +0900
+timestamp: 2023-10-13 21:27:23 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---output/tsv/hp_phenotype-omim_phenotype.tsv (2023-09-17 16:18:42 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/hp_phenotype-omim_phenotype.tsv (2023-10-13 18:16:37 +0900)
+latest-prerequisite time: 2023-10-13 18:16:37 +0900
 ................................
 
 Rule for TTL (output/ttl/hp_phenotype-orphanet_phenotype.ttl)
@@ -5419,12 +5547,12 @@ Rule for TTL (output/ttl/hp_phenotype-orphanet_phenotype.ttl)
 Investigating output/ttl/hp_phenotype-orphanet_phenotype.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-09-23 02:56:12 +0900
+timestamp: 2023-10-13 21:27:24 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---output/tsv/hp_phenotype-orphanet_phenotype.tsv (2023-09-22 18:14:47 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/hp_phenotype-orphanet_phenotype.tsv (2023-10-13 18:16:38 +0900)
+latest-prerequisite time: 2023-10-13 18:16:38 +0900
 ................................
 
 Rule for TTL (output/ttl/interpro-go.ttl)
@@ -5436,8 +5564,8 @@ timestamp: 2023-09-18 09:55:03 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/interpro-go.tsv (2023-09-17 16:20:25 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/interpro-pdb.ttl)
@@ -5449,8 +5577,8 @@ timestamp: 2023-09-18 09:55:14 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/interpro-pdb.tsv (2023-09-17 16:20:27 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/interpro-pfam.ttl)
@@ -5462,8 +5590,21 @@ timestamp: 2023-09-18 09:55:14 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/interpro-pfam.tsv (2023-09-17 16:20:28 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
+................................
+
+Rule for TTL (output/ttl/interpro-prosite.ttl)
+------------------------------
+Investigating output/ttl/interpro-prosite.ttl
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-13 22:14:51 +0900
+pre-requisites: 
+--output/ttl/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/interpro-prosite.tsv (2023-10-13 18:18:28 +0900)
+latest-prerequisite time: 2023-10-13 18:18:28 +0900
 ................................
 
 Rule for TTL (output/ttl/interpro-pubmed.ttl)
@@ -5475,8 +5616,8 @@ timestamp: 2023-09-18 09:55:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/interpro-pubmed.tsv (2023-09-17 16:20:30 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/interpro-reactome_pathway.ttl)
@@ -5488,8 +5629,21 @@ timestamp: 2023-09-18 09:55:19 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/interpro-reactome_pathway.tsv (2023-09-17 16:20:32 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
+................................
+
+Rule for TTL (output/ttl/interpro-smart.ttl)
+------------------------------
+Investigating output/ttl/interpro-smart.ttl
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-13 22:14:51 +0900
+pre-requisites: 
+--output/ttl/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/interpro-smart.tsv (2023-10-13 18:18:29 +0900)
+latest-prerequisite time: 2023-10-13 18:18:29 +0900
 ................................
 
 Rule for TTL (output/ttl/interpro-uniprot.ttl)
@@ -5501,8 +5655,8 @@ timestamp: 2023-09-23 08:00:23 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/interpro-uniprot.tsv (2023-09-22 22:01:22 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-ensembl_gene.ttl)
@@ -5510,12 +5664,12 @@ Rule for TTL (output/ttl/ncbigene-ensembl_gene.ttl)
 Investigating output/ttl/ncbigene-ensembl_gene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:04:17 +0900
+timestamp: 2023-10-13 23:07:49 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-ensembl_gene.tsv (2023-10-06 18:57:05 +0900)
-latest-prerequisite time: 2023-10-06 18:57:05 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-ensembl_gene.tsv (2023-10-13 19:01:29 +0900)
+latest-prerequisite time: 2023-10-13 19:01:29 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-ensembl_protein.ttl)
@@ -5523,12 +5677,12 @@ Rule for TTL (output/ttl/ncbigene-ensembl_protein.ttl)
 Investigating output/ttl/ncbigene-ensembl_protein.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:05:42 +0900
+timestamp: 2023-10-13 23:09:14 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-ensembl_protein.tsv (2023-10-06 18:57:57 +0900)
-latest-prerequisite time: 2023-10-06 18:57:57 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-ensembl_protein.tsv (2023-10-13 19:02:23 +0900)
+latest-prerequisite time: 2023-10-13 19:02:23 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-ensembl_transcript.ttl)
@@ -5536,12 +5690,12 @@ Rule for TTL (output/ttl/ncbigene-ensembl_transcript.ttl)
 Investigating output/ttl/ncbigene-ensembl_transcript.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:11 +0900
+timestamp: 2023-10-13 23:10:46 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-ensembl_transcript.tsv (2023-10-06 18:58:43 +0900)
-latest-prerequisite time: 2023-10-06 18:58:43 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-ensembl_transcript.tsv (2023-10-13 19:03:11 +0900)
+latest-prerequisite time: 2023-10-13 19:03:11 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-flybase_gene.ttl)
@@ -5549,12 +5703,12 @@ Rule for TTL (output/ttl/ncbigene-flybase_gene.ttl)
 Investigating output/ttl/ncbigene-flybase_gene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:12 +0900
+timestamp: 2023-10-13 23:10:47 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-flybase_gene.tsv (2023-10-06 18:59:59 +0900)
-latest-prerequisite time: 2023-10-06 18:59:59 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-flybase_gene.tsv (2023-10-13 19:04:18 +0900)
+latest-prerequisite time: 2023-10-13 19:04:18 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-go.ttl)
@@ -5562,12 +5716,12 @@ Rule for TTL (output/ttl/ncbigene-go.ttl)
 Investigating output/ttl/ncbigene-go.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:32 +0900
+timestamp: 2023-10-13 23:11:07 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-go.tsv (2023-10-06 19:00:07 +0900)
-latest-prerequisite time: 2023-10-06 19:00:07 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-go.tsv (2023-10-13 19:04:25 +0900)
+latest-prerequisite time: 2023-10-13 19:04:25 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-hgnc.ttl)
@@ -5575,12 +5729,12 @@ Rule for TTL (output/ttl/ncbigene-hgnc.ttl)
 Investigating output/ttl/ncbigene-hgnc.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:33 +0900
+timestamp: 2023-10-13 23:11:08 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-hgnc.tsv (2023-10-06 19:00:08 +0900)
-latest-prerequisite time: 2023-10-06 19:00:08 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-hgnc.tsv (2023-10-13 19:04:26 +0900)
+latest-prerequisite time: 2023-10-13 19:04:26 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-mgi.ttl)
@@ -5588,12 +5742,12 @@ Rule for TTL (output/ttl/ncbigene-mgi.ttl)
 Investigating output/ttl/ncbigene-mgi.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:34 +0900
+timestamp: 2023-10-13 23:11:08 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-mgi.tsv (2023-10-06 19:01:04 +0900)
-latest-prerequisite time: 2023-10-06 19:01:04 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-mgi.tsv (2023-10-13 19:05:25 +0900)
+latest-prerequisite time: 2023-10-13 19:05:25 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-mirbase.ttl)
@@ -5601,12 +5755,12 @@ Rule for TTL (output/ttl/ncbigene-mirbase.ttl)
 Investigating output/ttl/ncbigene-mirbase.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:34 +0900
+timestamp: 2023-10-13 23:11:09 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-mirbase.tsv (2023-10-06 19:02:34 +0900)
-latest-prerequisite time: 2023-10-06 19:02:34 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-mirbase.tsv (2023-10-13 19:06:54 +0900)
+latest-prerequisite time: 2023-10-13 19:06:54 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-omim_gene.ttl)
@@ -5614,12 +5768,12 @@ Rule for TTL (output/ttl/ncbigene-omim_gene.ttl)
 Investigating output/ttl/ncbigene-omim_gene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:35 +0900
+timestamp: 2023-10-13 23:11:09 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-omim_gene.tsv (2023-10-06 19:02:34 +0900)
-latest-prerequisite time: 2023-10-06 19:02:34 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-omim_gene.tsv (2023-10-13 19:06:55 +0900)
+latest-prerequisite time: 2023-10-13 19:06:55 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-refseq_genomic.ttl)
@@ -5627,12 +5781,12 @@ Rule for TTL (output/ttl/ncbigene-refseq_genomic.ttl)
 Investigating output/ttl/ncbigene-refseq_genomic.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:07:37 +0900
+timestamp: 2023-10-13 23:11:11 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-refseq_genomic.tsv (2023-10-06 19:06:30 +0900)
-latest-prerequisite time: 2023-10-06 19:06:30 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-refseq_genomic.tsv (2023-10-13 19:10:46 +0900)
+latest-prerequisite time: 2023-10-13 19:10:46 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-refseq_protein.ttl)
@@ -5640,12 +5794,12 @@ Rule for TTL (output/ttl/ncbigene-refseq_protein.ttl)
 Investigating output/ttl/ncbigene-refseq_protein.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:19:49 +0900
+timestamp: 2023-10-13 23:22:09 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-refseq_protein.tsv (2023-10-06 19:11:01 +0900)
-latest-prerequisite time: 2023-10-06 19:11:01 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-refseq_protein.tsv (2023-10-13 19:15:34 +0900)
+latest-prerequisite time: 2023-10-13 19:15:34 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-refseq_rna.ttl)
@@ -5653,12 +5807,12 @@ Rule for TTL (output/ttl/ncbigene-refseq_rna.ttl)
 Investigating output/ttl/ncbigene-refseq_rna.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:29:55 +0900
+timestamp: 2023-10-13 23:31:40 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-refseq_rna.tsv (2023-10-06 19:14:43 +0900)
-latest-prerequisite time: 2023-10-06 19:14:43 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-refseq_rna.tsv (2023-10-13 19:19:14 +0900)
+latest-prerequisite time: 2023-10-13 19:19:14 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-rgd.ttl)
@@ -5666,12 +5820,12 @@ Rule for TTL (output/ttl/ncbigene-rgd.ttl)
 Investigating output/ttl/ncbigene-rgd.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:29:57 +0900
+timestamp: 2023-10-13 23:31:43 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-rgd.tsv (2023-10-06 19:15:37 +0900)
-latest-prerequisite time: 2023-10-06 19:15:37 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-rgd.tsv (2023-10-13 19:20:09 +0900)
+latest-prerequisite time: 2023-10-13 19:20:09 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-sgd.ttl)
@@ -5679,12 +5833,12 @@ Rule for TTL (output/ttl/ncbigene-sgd.ttl)
 Investigating output/ttl/ncbigene-sgd.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:29:58 +0900
+timestamp: 2023-10-13 23:31:43 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-sgd.tsv (2023-10-06 19:16:41 +0900)
-latest-prerequisite time: 2023-10-06 19:16:41 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-sgd.tsv (2023-10-13 19:21:13 +0900)
+latest-prerequisite time: 2023-10-13 19:21:13 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-tair.ttl)
@@ -5692,12 +5846,12 @@ Rule for TTL (output/ttl/ncbigene-tair.ttl)
 Investigating output/ttl/ncbigene-tair.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:29:58 +0900
+timestamp: 2023-10-13 23:31:44 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-tair.tsv (2023-10-06 19:17:44 +0900)
-latest-prerequisite time: 2023-10-06 19:17:44 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-tair.tsv (2023-10-13 19:22:16 +0900)
+latest-prerequisite time: 2023-10-13 19:22:16 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-taxonomy.ttl)
@@ -5705,12 +5859,12 @@ Rule for TTL (output/ttl/ncbigene-taxonomy.ttl)
 Investigating output/ttl/ncbigene-taxonomy.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:37:45 +0900
+timestamp: 2023-10-13 23:39:03 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-taxonomy.tsv (2023-10-06 19:18:24 +0900)
-latest-prerequisite time: 2023-10-06 19:18:24 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-taxonomy.tsv (2023-10-13 19:22:57 +0900)
+latest-prerequisite time: 2023-10-13 19:22:57 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-vgnc.ttl)
@@ -5718,12 +5872,12 @@ Rule for TTL (output/ttl/ncbigene-vgnc.ttl)
 Investigating output/ttl/ncbigene-vgnc.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:37:48 +0900
+timestamp: 2023-10-13 23:39:08 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-vgnc.tsv (2023-10-06 19:19:28 +0900)
-latest-prerequisite time: 2023-10-06 19:19:28 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-vgnc.tsv (2023-10-13 19:24:01 +0900)
+latest-prerequisite time: 2023-10-13 19:24:01 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-wormbase_gene.ttl)
@@ -5731,12 +5885,12 @@ Rule for TTL (output/ttl/ncbigene-wormbase_gene.ttl)
 Investigating output/ttl/ncbigene-wormbase_gene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:37:48 +0900
+timestamp: 2023-10-13 23:39:09 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-wormbase_gene.tsv (2023-10-06 19:20:32 +0900)
-latest-prerequisite time: 2023-10-06 19:20:32 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-wormbase_gene.tsv (2023-10-13 19:25:05 +0900)
+latest-prerequisite time: 2023-10-13 19:25:05 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-xenbase_gene.ttl)
@@ -5744,12 +5898,12 @@ Rule for TTL (output/ttl/ncbigene-xenbase_gene.ttl)
 Investigating output/ttl/ncbigene-xenbase_gene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:37:49 +0900
+timestamp: 2023-10-13 23:39:09 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-xenbase_gene.tsv (2023-10-06 19:21:36 +0900)
-latest-prerequisite time: 2023-10-06 19:21:36 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-xenbase_gene.tsv (2023-10-13 19:26:09 +0900)
+latest-prerequisite time: 2023-10-13 19:26:09 +0900
 ................................
 
 Rule for TTL (output/ttl/ncbigene-zfin_gene.ttl)
@@ -5757,12 +5911,12 @@ Rule for TTL (output/ttl/ncbigene-zfin_gene.ttl)
 Investigating output/ttl/ncbigene-zfin_gene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:37:49 +0900
+timestamp: 2023-10-13 23:39:10 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/ncbigene-zfin_gene.tsv (2023-10-06 19:22:40 +0900)
-latest-prerequisite time: 2023-10-06 19:22:40 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/ncbigene-zfin_gene.tsv (2023-10-13 19:27:13 +0900)
+latest-prerequisite time: 2023-10-13 19:27:13 +0900
 ................................
 
 Rule for TTL (output/ttl/oma_protein-ensembl_gene.ttl)
@@ -5770,12 +5924,12 @@ Rule for TTL (output/ttl/oma_protein-ensembl_gene.ttl)
 Investigating output/ttl/oma_protein-ensembl_gene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:38:12 +0900
+timestamp: 2023-10-13 23:39:31 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/oma_protein-ensembl_gene.tsv (2023-10-06 19:28:45 +0900)
-latest-prerequisite time: 2023-10-06 19:28:45 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/oma_protein-ensembl_gene.tsv (2023-10-13 19:34:15 +0900)
+latest-prerequisite time: 2023-10-13 19:34:15 +0900
 ................................
 
 Rule for TTL (output/ttl/oma_protein-ensembl_transcript.ttl)
@@ -5783,12 +5937,12 @@ Rule for TTL (output/ttl/oma_protein-ensembl_transcript.ttl)
 Investigating output/ttl/oma_protein-ensembl_transcript.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:38:37 +0900
+timestamp: 2023-10-13 23:39:55 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/oma_protein-ensembl_transcript.tsv (2023-10-06 19:35:15 +0900)
-latest-prerequisite time: 2023-10-06 19:35:15 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/oma_protein-ensembl_transcript.tsv (2023-10-13 19:43:07 +0900)
+latest-prerequisite time: 2023-10-13 19:43:07 +0900
 ................................
 
 Rule for TTL (output/ttl/oma_protein-ncbigene.ttl)
@@ -5796,12 +5950,12 @@ Rule for TTL (output/ttl/oma_protein-ncbigene.ttl)
 Investigating output/ttl/oma_protein-ncbigene.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:39:36 +0900
+timestamp: 2023-10-13 23:40:52 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/oma_protein-ncbigene.tsv (2023-10-06 19:35:30 +0900)
-latest-prerequisite time: 2023-10-06 19:35:30 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/oma_protein-ncbigene.tsv (2023-10-13 19:43:23 +0900)
+latest-prerequisite time: 2023-10-13 19:43:23 +0900
 ................................
 
 Rule for TTL (output/ttl/oma_protein-uniprot.ttl)
@@ -5809,12 +5963,25 @@ Rule for TTL (output/ttl/oma_protein-uniprot.ttl)
 Investigating output/ttl/oma_protein-uniprot.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-06 23:42:08 +0900
+timestamp: 2023-10-13 23:43:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/oma_protein-uniprot.tsv (2023-10-06 19:35:38 +0900)
-latest-prerequisite time: 2023-10-06 19:35:38 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/oma_protein-uniprot.tsv (2023-10-13 19:43:31 +0900)
+latest-prerequisite time: 2023-10-13 19:43:31 +0900
+................................
+
+Rule for TTL (output/ttl/prosite-prosite_prorule.ttl)
+------------------------------
+Investigating output/ttl/prosite-prosite_prorule.ttl
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-13 23:43:45 +0900
+pre-requisites: 
+--output/ttl/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/prosite-prosite_prorule.tsv (2023-10-13 19:43:45 +0900)
+latest-prerequisite time: 2023-10-13 19:43:45 +0900
 ................................
 
 Rule for TTL (output/ttl/pubchem_compound-atc.ttl)
@@ -5826,8 +5993,8 @@ timestamp: 2023-08-11 23:28:24 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/pubchem_compound-atc.tsv (2023-08-11 19:32:51 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_pathway-chebi.ttl)
@@ -5835,12 +6002,12 @@ Rule for TTL (output/ttl/reactome_pathway-chebi.ttl)
 Investigating output/ttl/reactome_pathway-chebi.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:36 +0900
+timestamp: 2023-10-14 00:23:38 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_pathway-chebi.tsv (2023-10-06 19:44:36 +0900)
-latest-prerequisite time: 2023-10-06 19:44:36 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_pathway-chebi.tsv (2023-10-13 19:53:05 +0900)
+latest-prerequisite time: 2023-10-13 19:53:05 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_pathway-go.ttl)
@@ -5848,12 +6015,12 @@ Rule for TTL (output/ttl/reactome_pathway-go.ttl)
 Investigating output/ttl/reactome_pathway-go.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:36 +0900
+timestamp: 2023-10-14 00:23:38 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_pathway-go.tsv (2023-10-06 19:44:36 +0900)
-latest-prerequisite time: 2023-10-06 19:44:36 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_pathway-go.tsv (2023-10-13 19:53:06 +0900)
+latest-prerequisite time: 2023-10-13 19:53:06 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_pathway-iuphar_ligand.ttl)
@@ -5861,12 +6028,12 @@ Rule for TTL (output/ttl/reactome_pathway-iuphar_ligand.ttl)
 Investigating output/ttl/reactome_pathway-iuphar_ligand.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:37 +0900
+timestamp: 2023-10-14 00:23:39 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_pathway-iuphar_ligand.tsv (2023-10-06 19:44:37 +0900)
-latest-prerequisite time: 2023-10-06 19:44:37 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_pathway-iuphar_ligand.tsv (2023-10-13 19:53:06 +0900)
+latest-prerequisite time: 2023-10-13 19:53:06 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_pathway-mirbase.ttl)
@@ -5874,12 +6041,12 @@ Rule for TTL (output/ttl/reactome_pathway-mirbase.ttl)
 Investigating output/ttl/reactome_pathway-mirbase.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:37 +0900
+timestamp: 2023-10-14 00:23:39 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_pathway-mirbase.tsv (2023-10-06 19:44:37 +0900)
-latest-prerequisite time: 2023-10-06 19:44:37 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_pathway-mirbase.tsv (2023-10-13 19:53:06 +0900)
+latest-prerequisite time: 2023-10-13 19:53:06 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_pathway-reactome_reaction.ttl)
@@ -5887,12 +6054,12 @@ Rule for TTL (output/ttl/reactome_pathway-reactome_reaction.ttl)
 Investigating output/ttl/reactome_pathway-reactome_reaction.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:41 +0900
+timestamp: 2023-10-14 00:23:43 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_pathway-reactome_reaction.tsv (2023-10-06 19:44:38 +0900)
-latest-prerequisite time: 2023-10-06 19:44:38 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_pathway-reactome_reaction.tsv (2023-10-13 19:53:07 +0900)
+latest-prerequisite time: 2023-10-13 19:53:07 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_pathway-uniprot.ttl)
@@ -5900,12 +6067,12 @@ Rule for TTL (output/ttl/reactome_pathway-uniprot.ttl)
 Investigating output/ttl/reactome_pathway-uniprot.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:48 +0900
+timestamp: 2023-10-14 00:23:50 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_pathway-uniprot.tsv (2023-10-06 19:44:40 +0900)
-latest-prerequisite time: 2023-10-06 19:44:40 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_pathway-uniprot.tsv (2023-10-13 19:53:09 +0900)
+latest-prerequisite time: 2023-10-13 19:53:09 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_reaction-chebi.ttl)
@@ -5913,12 +6080,12 @@ Rule for TTL (output/ttl/reactome_reaction-chebi.ttl)
 Investigating output/ttl/reactome_reaction-chebi.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:50 +0900
+timestamp: 2023-10-14 00:23:52 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_reaction-chebi.tsv (2023-10-06 19:44:40 +0900)
-latest-prerequisite time: 2023-10-06 19:44:40 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_reaction-chebi.tsv (2023-10-13 19:53:10 +0900)
+latest-prerequisite time: 2023-10-13 19:53:10 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_reaction-go.ttl)
@@ -5926,12 +6093,12 @@ Rule for TTL (output/ttl/reactome_reaction-go.ttl)
 Investigating output/ttl/reactome_reaction-go.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:51 +0900
+timestamp: 2023-10-14 00:23:52 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_reaction-go.tsv (2023-10-06 19:44:41 +0900)
-latest-prerequisite time: 2023-10-06 19:44:41 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_reaction-go.tsv (2023-10-13 19:53:10 +0900)
+latest-prerequisite time: 2023-10-13 19:53:10 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_reaction-iuphar_ligand.ttl)
@@ -5939,12 +6106,12 @@ Rule for TTL (output/ttl/reactome_reaction-iuphar_ligand.ttl)
 Investigating output/ttl/reactome_reaction-iuphar_ligand.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:51 +0900
+timestamp: 2023-10-14 00:23:53 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_reaction-iuphar_ligand.tsv (2023-10-06 19:44:41 +0900)
-latest-prerequisite time: 2023-10-06 19:44:41 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_reaction-iuphar_ligand.tsv (2023-10-13 19:53:10 +0900)
+latest-prerequisite time: 2023-10-13 19:53:10 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_reaction-mirbase.ttl)
@@ -5952,12 +6119,12 @@ Rule for TTL (output/ttl/reactome_reaction-mirbase.ttl)
 Investigating output/ttl/reactome_reaction-mirbase.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:51 +0900
+timestamp: 2023-10-14 00:23:53 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_reaction-mirbase.tsv (2023-10-06 19:44:41 +0900)
-latest-prerequisite time: 2023-10-06 19:44:41 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_reaction-mirbase.tsv (2023-10-13 19:53:10 +0900)
+latest-prerequisite time: 2023-10-13 19:53:10 +0900
 ................................
 
 Rule for TTL (output/ttl/reactome_reaction-uniprot.ttl)
@@ -5965,12 +6132,12 @@ Rule for TTL (output/ttl/reactome_reaction-uniprot.ttl)
 Investigating output/ttl/reactome_reaction-uniprot.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 00:24:57 +0900
+timestamp: 2023-10-14 00:23:59 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/reactome_reaction-uniprot.tsv (2023-10-06 19:44:42 +0900)
-latest-prerequisite time: 2023-10-06 19:44:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/reactome_reaction-uniprot.tsv (2023-10-13 19:53:12 +0900)
+latest-prerequisite time: 2023-10-13 19:53:12 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_protein-uniprot.ttl)
@@ -5978,12 +6145,12 @@ Rule for TTL (output/ttl/refseq_protein-uniprot.ttl)
 Investigating output/ttl/refseq_protein-uniprot.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 01:51:27 +0900
+timestamp: 2023-10-14 01:27:56 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/refseq_protein-uniprot.tsv (2023-10-06 19:52:24 +0900)
-latest-prerequisite time: 2023-10-06 19:52:24 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/refseq_protein-uniprot.tsv (2023-10-13 19:58:20 +0900)
+latest-prerequisite time: 2023-10-13 19:58:20 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_rna-dbsnp.ttl)
@@ -5995,8 +6162,8 @@ timestamp: 2023-09-18 17:43:42 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/refseq_rna-dbsnp.tsv (2023-09-17 20:10:45 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_rna-hgnc.ttl)
@@ -6008,8 +6175,8 @@ timestamp: 2023-09-18 17:43:50 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/refseq_rna-hgnc.tsv (2023-09-17 20:12:32 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_rna-ncbigene.ttl)
@@ -6021,8 +6188,8 @@ timestamp: 2023-09-18 17:53:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/refseq_rna-ncbigene.tsv (2023-09-17 20:15:32 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_rna-omim_gene.ttl)
@@ -6034,8 +6201,8 @@ timestamp: 2023-09-18 17:53:18 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/refseq_rna-omim_gene.tsv (2023-09-17 20:17:05 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_rna-pubmed.ttl)
@@ -6047,8 +6214,8 @@ timestamp: 2023-09-18 17:54:02 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/refseq_rna-pubmed.tsv (2023-09-17 20:18:50 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_rna-refseq_protein.ttl)
@@ -6060,8 +6227,8 @@ timestamp: 2023-09-18 18:04:02 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/refseq_rna-refseq_protein.tsv (2023-09-17 20:21:34 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/refseq_rna-taxonomy.ttl)
@@ -6073,8 +6240,8 @@ timestamp: 2023-09-18 18:13:11 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/refseq_rna-taxonomy.tsv (2023-09-17 20:24:11 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/rhea-chebi.ttl)
@@ -6086,8 +6253,8 @@ timestamp: 2023-09-18 18:13:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/rhea-chebi.tsv (2023-09-17 20:24:12 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/rhea-ec.ttl)
@@ -6099,8 +6266,8 @@ timestamp: 2023-09-18 18:13:15 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/rhea-ec.tsv (2023-09-17 20:24:13 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/rhea-go.ttl)
@@ -6112,8 +6279,8 @@ timestamp: 2023-09-18 18:13:16 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/rhea-go.tsv (2023-09-17 20:24:14 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/rhea-pubmed.ttl)
@@ -6125,8 +6292,8 @@ timestamp: 2023-09-18 18:13:17 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/rhea-pubmed.tsv (2023-09-17 20:24:15 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/rhea-reactome_reaction.ttl)
@@ -6138,8 +6305,8 @@ timestamp: 2023-09-18 18:13:17 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/rhea-reactome_reaction.tsv (2023-09-17 20:24:15 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/rhea-uniprot.ttl)
@@ -6151,8 +6318,8 @@ timestamp: 2023-09-18 18:18:00 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/rhea-uniprot.tsv (2023-09-17 20:24:49 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_accession-bioproject.ttl)
@@ -6160,12 +6327,12 @@ Rule for TTL (output/ttl/sra_accession-bioproject.ttl)
 Investigating output/ttl/sra_accession-bioproject.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 01:51:36 +0900
+timestamp: 2023-10-14 01:28:04 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_accession-bioproject.tsv (2023-10-06 19:53:35 +0900)
-latest-prerequisite time: 2023-10-06 19:53:35 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_accession-bioproject.tsv (2023-10-13 19:59:28 +0900)
+latest-prerequisite time: 2023-10-13 19:59:28 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_accession-biosample.ttl)
@@ -6173,12 +6340,12 @@ Rule for TTL (output/ttl/sra_accession-biosample.ttl)
 Investigating output/ttl/sra_accession-biosample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 01:56:05 +0900
+timestamp: 2023-10-14 01:32:28 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_accession-biosample.tsv (2023-10-06 20:00:14 +0900)
-latest-prerequisite time: 2023-10-06 20:00:14 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_accession-biosample.tsv (2023-10-13 20:06:17 +0900)
+latest-prerequisite time: 2023-10-13 20:06:17 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_accession-sra_analysis.ttl)
@@ -6186,12 +6353,12 @@ Rule for TTL (output/ttl/sra_accession-sra_analysis.ttl)
 Investigating output/ttl/sra_accession-sra_analysis.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 01:56:09 +0900
+timestamp: 2023-10-14 01:32:31 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_accession-sra_analysis.tsv (2023-10-06 20:01:11 +0900)
-latest-prerequisite time: 2023-10-06 20:01:11 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_accession-sra_analysis.tsv (2023-10-13 20:07:17 +0900)
+latest-prerequisite time: 2023-10-13 20:07:17 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_accession-sra_experiment.ttl)
@@ -6199,12 +6366,12 @@ Rule for TTL (output/ttl/sra_accession-sra_experiment.ttl)
 Investigating output/ttl/sra_accession-sra_experiment.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:00:41 +0900
+timestamp: 2023-10-14 01:37:23 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_accession-sra_experiment.tsv (2023-10-06 20:06:58 +0900)
-latest-prerequisite time: 2023-10-06 20:06:58 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_accession-sra_experiment.tsv (2023-10-13 20:12:58 +0900)
+latest-prerequisite time: 2023-10-13 20:12:58 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_accession-sra_project.ttl)
@@ -6212,12 +6379,12 @@ Rule for TTL (output/ttl/sra_accession-sra_project.ttl)
 Investigating output/ttl/sra_accession-sra_project.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:00:46 +0900
+timestamp: 2023-10-14 01:37:30 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_accession-sra_project.tsv (2023-10-06 20:07:54 +0900)
-latest-prerequisite time: 2023-10-06 20:07:54 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_accession-sra_project.tsv (2023-10-13 20:13:58 +0900)
+latest-prerequisite time: 2023-10-13 20:13:58 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_accession-sra_run.ttl)
@@ -6225,12 +6392,12 @@ Rule for TTL (output/ttl/sra_accession-sra_run.ttl)
 Investigating output/ttl/sra_accession-sra_run.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:06:12 +0900
+timestamp: 2023-10-14 01:43:21 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_accession-sra_run.tsv (2023-10-06 20:14:34 +0900)
-latest-prerequisite time: 2023-10-06 20:14:34 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_accession-sra_run.tsv (2023-10-13 20:20:26 +0900)
+latest-prerequisite time: 2023-10-13 20:20:26 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_accession-sra_sample.ttl)
@@ -6238,12 +6405,12 @@ Rule for TTL (output/ttl/sra_accession-sra_sample.ttl)
 Investigating output/ttl/sra_accession-sra_sample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:10:46 +0900
+timestamp: 2023-10-14 01:47:58 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_accession-sra_sample.tsv (2023-10-06 20:20:11 +0900)
-latest-prerequisite time: 2023-10-06 20:20:11 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_accession-sra_sample.tsv (2023-10-13 20:26:01 +0900)
+latest-prerequisite time: 2023-10-13 20:26:01 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_experiment-bioproject.ttl)
@@ -6251,12 +6418,12 @@ Rule for TTL (output/ttl/sra_experiment-bioproject.ttl)
 Investigating output/ttl/sra_experiment-bioproject.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:15:18 +0900
+timestamp: 2023-10-14 01:52:00 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_experiment-bioproject.tsv (2023-10-06 20:23:20 +0900)
-latest-prerequisite time: 2023-10-06 20:23:20 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_experiment-bioproject.tsv (2023-10-13 20:29:04 +0900)
+latest-prerequisite time: 2023-10-13 20:29:04 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_experiment-biosample.ttl)
@@ -6264,12 +6431,12 @@ Rule for TTL (output/ttl/sra_experiment-biosample.ttl)
 Investigating output/ttl/sra_experiment-biosample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:19:23 +0900
+timestamp: 2023-10-14 01:56:01 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_experiment-biosample.tsv (2023-10-06 20:26:14 +0900)
-latest-prerequisite time: 2023-10-06 20:26:14 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_experiment-biosample.tsv (2023-10-13 20:32:01 +0900)
+latest-prerequisite time: 2023-10-13 20:32:01 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_experiment-sra_project.ttl)
@@ -6277,12 +6444,12 @@ Rule for TTL (output/ttl/sra_experiment-sra_project.ttl)
 Investigating output/ttl/sra_experiment-sra_project.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:23:46 +0900
+timestamp: 2023-10-14 02:00:19 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_experiment-sra_project.tsv (2023-10-06 20:28:42 +0900)
-latest-prerequisite time: 2023-10-06 20:28:42 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_experiment-sra_project.tsv (2023-10-13 20:34:32 +0900)
+latest-prerequisite time: 2023-10-13 20:34:32 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_experiment-sra_sample.ttl)
@@ -6290,12 +6457,12 @@ Rule for TTL (output/ttl/sra_experiment-sra_sample.ttl)
 Investigating output/ttl/sra_experiment-sra_sample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:28:45 +0900
+timestamp: 2023-10-14 02:04:58 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_experiment-sra_sample.tsv (2023-10-06 20:31:17 +0900)
-latest-prerequisite time: 2023-10-06 20:31:17 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_experiment-sra_sample.tsv (2023-10-13 20:37:05 +0900)
+latest-prerequisite time: 2023-10-13 20:37:05 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_project-bioproject.ttl)
@@ -6303,12 +6470,12 @@ Rule for TTL (output/ttl/sra_project-bioproject.ttl)
 Investigating output/ttl/sra_project-bioproject.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:28:50 +0900
+timestamp: 2023-10-14 02:05:03 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_project-bioproject.tsv (2023-10-06 20:32:14 +0900)
-latest-prerequisite time: 2023-10-06 20:32:14 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_project-bioproject.tsv (2023-10-13 20:38:04 +0900)
+latest-prerequisite time: 2023-10-13 20:38:04 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_run-bioproject.ttl)
@@ -6316,12 +6483,12 @@ Rule for TTL (output/ttl/sra_run-bioproject.ttl)
 Investigating output/ttl/sra_run-bioproject.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:32:29 +0900
+timestamp: 2023-10-14 02:09:25 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_run-bioproject.tsv (2023-10-06 20:35:53 +0900)
-latest-prerequisite time: 2023-10-06 20:35:53 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_run-bioproject.tsv (2023-10-13 20:41:34 +0900)
+latest-prerequisite time: 2023-10-13 20:41:34 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_run-biosample.ttl)
@@ -6329,12 +6496,12 @@ Rule for TTL (output/ttl/sra_run-biosample.ttl)
 Investigating output/ttl/sra_run-biosample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:36:45 +0900
+timestamp: 2023-10-14 02:13:50 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_run-biosample.tsv (2023-10-06 20:39:18 +0900)
-latest-prerequisite time: 2023-10-06 20:39:18 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_run-biosample.tsv (2023-10-13 20:44:58 +0900)
+latest-prerequisite time: 2023-10-13 20:44:58 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_run-sra_experiment.ttl)
@@ -6342,12 +6509,12 @@ Rule for TTL (output/ttl/sra_run-sra_experiment.ttl)
 Investigating output/ttl/sra_run-sra_experiment.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:40:34 +0900
+timestamp: 2023-10-14 02:17:42 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_run-sra_experiment.tsv (2023-10-06 20:42:07 +0900)
-latest-prerequisite time: 2023-10-06 20:42:07 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_run-sra_experiment.tsv (2023-10-13 20:47:46 +0900)
+latest-prerequisite time: 2023-10-13 20:47:46 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_run-sra_project.ttl)
@@ -6355,12 +6522,12 @@ Rule for TTL (output/ttl/sra_run-sra_project.ttl)
 Investigating output/ttl/sra_run-sra_project.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:44:42 +0900
+timestamp: 2023-10-14 02:21:41 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_run-sra_project.tsv (2023-10-06 20:45:01 +0900)
-latest-prerequisite time: 2023-10-06 20:45:01 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_run-sra_project.tsv (2023-10-13 20:50:44 +0900)
+latest-prerequisite time: 2023-10-13 20:50:44 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_run-sra_sample.ttl)
@@ -6368,12 +6535,12 @@ Rule for TTL (output/ttl/sra_run-sra_sample.ttl)
 Investigating output/ttl/sra_run-sra_sample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:48:28 +0900
+timestamp: 2023-10-14 02:25:38 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_run-sra_sample.tsv (2023-10-06 20:47:49 +0900)
-latest-prerequisite time: 2023-10-06 20:47:49 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_run-sra_sample.tsv (2023-10-13 20:53:34 +0900)
+latest-prerequisite time: 2023-10-13 20:53:34 +0900
 ................................
 
 Rule for TTL (output/ttl/sra_sample-biosample.ttl)
@@ -6381,12 +6548,12 @@ Rule for TTL (output/ttl/sra_sample-biosample.ttl)
 Investigating output/ttl/sra_sample-biosample.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:52:30 +0900
+timestamp: 2023-10-14 02:29:35 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/sra_sample-biosample.tsv (2023-10-06 20:50:31 +0900)
-latest-prerequisite time: 2023-10-06 20:50:31 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/sra_sample-biosample.tsv (2023-10-13 20:56:13 +0900)
+latest-prerequisite time: 2023-10-13 20:56:13 +0900
 ................................
 
 Rule for TTL (output/ttl/swisslipids-chebi.ttl)
@@ -6394,12 +6561,12 @@ Rule for TTL (output/ttl/swisslipids-chebi.ttl)
 Investigating output/ttl/swisslipids-chebi.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:52:32 +0900
+timestamp: 2023-10-14 02:29:37 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/swisslipids-chebi.tsv (2023-10-06 20:50:45 +0900)
-latest-prerequisite time: 2023-10-06 20:50:45 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/swisslipids-chebi.tsv (2023-10-13 20:56:27 +0900)
+latest-prerequisite time: 2023-10-13 20:56:27 +0900
 ................................
 
 Rule for TTL (output/ttl/swisslipids-hmdb.ttl)
@@ -6407,12 +6574,12 @@ Rule for TTL (output/ttl/swisslipids-hmdb.ttl)
 Investigating output/ttl/swisslipids-hmdb.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:52:32 +0900
+timestamp: 2023-10-14 02:29:37 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/swisslipids-hmdb.tsv (2023-10-06 20:51:00 +0900)
-latest-prerequisite time: 2023-10-06 20:51:00 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/swisslipids-hmdb.tsv (2023-10-13 20:56:41 +0900)
+latest-prerequisite time: 2023-10-13 20:56:41 +0900
 ................................
 
 Rule for TTL (output/ttl/swisslipids-inchi_key.ttl)
@@ -6420,12 +6587,12 @@ Rule for TTL (output/ttl/swisslipids-inchi_key.ttl)
 Investigating output/ttl/swisslipids-inchi_key.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:52:38 +0900
+timestamp: 2023-10-14 02:29:43 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/swisslipids-inchi_key.tsv (2023-10-06 20:51:12 +0900)
-latest-prerequisite time: 2023-10-06 20:51:12 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/swisslipids-inchi_key.tsv (2023-10-13 20:56:54 +0900)
+latest-prerequisite time: 2023-10-13 20:56:54 +0900
 ................................
 
 Rule for TTL (output/ttl/taxonomy-pubmed.ttl)
@@ -6433,12 +6600,12 @@ Rule for TTL (output/ttl/taxonomy-pubmed.ttl)
 Investigating output/ttl/taxonomy-pubmed.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 02:52:39 +0900
+timestamp: 2023-10-14 02:29:43 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/taxonomy-pubmed.tsv (2023-10-06 20:51:13 +0900)
-latest-prerequisite time: 2023-10-06 20:51:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/taxonomy-pubmed.tsv (2023-10-13 20:56:55 +0900)
+latest-prerequisite time: 2023-10-13 20:56:55 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-chembl_target.ttl)
@@ -6450,8 +6617,8 @@ timestamp: 2023-09-18 23:34:16 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-chembl_target.tsv (2023-09-17 22:13:03 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-dbsnp.ttl)
@@ -6463,8 +6630,8 @@ timestamp: 2023-09-18 23:34:17 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-dbsnp.tsv (2023-09-17 22:13:29 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-ec.ttl)
@@ -6476,8 +6643,8 @@ timestamp: 2023-09-18 23:39:23 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-ec.tsv (2023-09-17 22:49:46 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-ensembl_gene.ttl)
@@ -6489,8 +6656,8 @@ timestamp: 2023-09-18 23:40:45 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-ensembl_gene.tsv (2023-09-17 23:39:37 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-ensembl_protein.ttl)
@@ -6502,8 +6669,8 @@ timestamp: 2023-09-18 23:42:05 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-ensembl_protein.tsv (2023-09-18 00:29:16 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-ensembl_transcript.ttl)
@@ -6515,8 +6682,8 @@ timestamp: 2023-09-18 23:43:29 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-ensembl_transcript.tsv (2023-09-18 01:18:06 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-go.ttl)
@@ -6528,8 +6695,8 @@ timestamp: 2023-09-19 01:52:55 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-go.tsv (2023-09-18 01:35:33 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-hgnc.ttl)
@@ -6541,8 +6708,8 @@ timestamp: 2023-09-19 01:53:06 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-hgnc.tsv (2023-09-18 02:15:22 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-insdc.ttl)
@@ -6554,8 +6721,8 @@ timestamp: 2023-09-19 03:22:43 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-insdc.tsv (2023-09-18 03:04:35 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-intact.ttl)
@@ -6567,8 +6734,8 @@ timestamp: 2023-09-19 03:22:53 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-intact.tsv (2023-09-18 03:05:46 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-ncbigene.ttl)
@@ -6580,8 +6747,8 @@ timestamp: 2023-09-19 03:24:33 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-ncbigene.tsv (2023-09-18 03:46:11 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-oma_group.ttl)
@@ -6593,8 +6760,8 @@ timestamp: 2023-09-19 03:26:10 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-oma_group.tsv (2023-09-18 04:27:24 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-omim_gene.ttl)
@@ -6606,8 +6773,8 @@ timestamp: 2023-09-19 03:26:11 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-omim_gene.tsv (2023-09-18 04:27:31 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-omim_phenotype.ttl)
@@ -6619,8 +6786,8 @@ timestamp: 2023-09-19 03:26:11 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-omim_phenotype.tsv (2023-09-18 04:27:35 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-orphanet_phenotype.ttl)
@@ -6632,8 +6799,8 @@ timestamp: 2023-09-23 16:21:41 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-orphanet_phenotype.tsv (2023-09-23 02:32:28 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-pdb.ttl)
@@ -6645,8 +6812,8 @@ timestamp: 2023-09-19 03:26:14 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-pdb.tsv (2023-09-18 05:56:53 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-reactome_pathway.ttl)
@@ -6658,8 +6825,8 @@ timestamp: 2023-09-19 03:26:16 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-reactome_pathway.tsv (2023-09-18 06:55:18 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-refseq_protein.ttl)
@@ -6671,8 +6838,8 @@ timestamp: 2023-09-19 03:34:42 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-refseq_protein.tsv (2023-09-18 07:43:03 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot-uniprot_mnemonic.ttl)
@@ -6684,8 +6851,8 @@ timestamp: 2023-09-19 05:27:58 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
 --output/tsv/uniprot-uniprot_mnemonic.tsv (2023-09-18 08:41:40 +0900)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot_reference_proteome-assembly_insdc.ttl)
@@ -6693,12 +6860,12 @@ Rule for TTL (output/ttl/uniprot_reference_proteome-assembly_insdc.ttl)
 Investigating output/ttl/uniprot_reference_proteome-assembly_insdc.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 05:15:49 +0900
+timestamp: 2023-10-14 06:15:49 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/uniprot_reference_proteome-assembly_insdc.tsv (2023-10-06 20:57:22 +0900)
-latest-prerequisite time: 2023-10-06 20:57:22 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/uniprot_reference_proteome-assembly_insdc.tsv (2023-10-13 21:04:00 +0900)
+latest-prerequisite time: 2023-10-13 21:04:00 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot_reference_proteome-assembly_refseq.ttl)
@@ -6706,12 +6873,12 @@ Rule for TTL (output/ttl/uniprot_reference_proteome-assembly_refseq.ttl)
 Investigating output/ttl/uniprot_reference_proteome-assembly_refseq.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 05:15:49 +0900
+timestamp: 2023-10-14 06:15:50 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/uniprot_reference_proteome-assembly_refseq.tsv (2023-10-06 20:57:22 +0900)
-latest-prerequisite time: 2023-10-06 20:57:22 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/uniprot_reference_proteome-assembly_refseq.tsv (2023-10-13 21:04:00 +0900)
+latest-prerequisite time: 2023-10-13 21:04:00 +0900
 ................................
 
 Rule for TTL (output/ttl/uniprot_reference_proteome-taxonomy.ttl)
@@ -6719,40 +6886,37 @@ Rule for TTL (output/ttl/uniprot_reference_proteome-taxonomy.ttl)
 Investigating output/ttl/uniprot_reference_proteome-taxonomy.ttl
 class: Rake::FileTask
 task needed: true
-timestamp: 2023-10-07 05:15:53 +0900
+timestamp: 2023-10-14 06:15:54 +0900
 pre-requisites: 
 --output/ttl/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
---output/tsv/uniprot_reference_proteome-taxonomy.tsv (2023-10-06 20:57:23 +0900)
-latest-prerequisite time: 2023-10-06 20:57:23 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+--output/tsv/uniprot_reference_proteome-taxonomy.tsv (2023-10-13 21:04:00 +0900)
+latest-prerequisite time: 2023-10-13 21:04:00 +0900
 ................................
 
 ### Update ID and Label TTL for atc if check_id_label_filesize false or check_id_label_timestamp true
 # File output/id-label/atc.ttl has no timestamp file
-# File output/id-label/atc.ttl is created 6.881633037912326 days ago (will be updated when >5 days)
+# File output/id-label/atc.ttl is created 7.041672298613796 days ago (will be updated when >5 days)
 ## Update output/id-label/atc.ttl
-< 2023-10-07T05:15:55 atc
+< 2023-10-14T06:15:57 atc
 togoid-rdfize-id-label atc
-> 2023-10-07T05:15:56 atc
+> 2023-10-14T06:15:58 atc
 ### Update ID and Label TTL for bioproject if check_id_label_filesize false or check_id_label_timestamp true
 # File output/id-label/bioproject.ttl is older than input/bioproject/download.lock
 ## Update output/id-label/bioproject.ttl
-< 2023-10-07T05:15:56 bioproject
+< 2023-10-14T06:15:58 bioproject
 togoid-rdfize-id-label bioproject
-> 2023-10-07T05:16:01 bioproject
-### Update ID and Label TTL for cellosaurus if check_id_label_filesize false or check_id_label_timestamp true
-# File output/id-label/cellosaurus.ttl is older than input/cellosaurus/download.lock
-## Update output/id-label/cellosaurus.ttl
-< 2023-10-07T05:16:01 cellosaurus
-togoid-rdfize-id-label cellosaurus
-> 2023-10-07T05:16:06 cellosaurus
+> 2023-10-14T06:16:02 bioproject
+### Update ID and Label TTL for cellosaurus if check_id_label_filesize false or check_id_label_timestamp false
+# File output/id-label/cellosaurus.ttl is newer than input/cellosaurus/download.lock
+# => Preserving output/ttl/cellosaurus.ttl
 ### Update ID and Label TTL for ec if check_id_label_filesize false or check_id_label_timestamp true
 # File output/id-label/ec.ttl has no timestamp file
-# File output/id-label/ec.ttl is created 6.881695806220671 days ago (will be updated when >5 days)
+# File output/id-label/ec.ttl is created 7.041621537107048 days ago (will be updated when >5 days)
 ## Update output/id-label/ec.ttl
-< 2023-10-07T05:16:06 ec
+< 2023-10-14T06:16:02 ec
 togoid-rdfize-id-label ec
-> 2023-10-07T05:16:06 ec
+> 2023-10-14T06:16:03 ec
 ### Update ID and Label TTL for hmdb if check_id_label_filesize false or check_id_label_timestamp false
 # File output/id-label/hmdb.ttl is newer than input/hmdb/download.lock
 # => Preserving output/ttl/hmdb.ttl
@@ -6764,34 +6928,46 @@ togoid-rdfize-id-label ec
 # => Preserving output/ttl/interpro.ttl
 ### Update ID and Label TTL for pathbank if check_id_label_filesize false or check_id_label_timestamp true
 # File output/id-label/pathbank.ttl has no timestamp file
-# File output/id-label/pathbank.ttl is created 6.881691645799225 days ago (will be updated when >5 days)
+# File output/id-label/pathbank.ttl is created 7.041619053511713 days ago (will be updated when >5 days)
 ## Update output/id-label/pathbank.ttl
-< 2023-10-07T05:16:06 pathbank
+< 2023-10-14T06:16:03 pathbank
 togoid-rdfize-id-label pathbank
-> 2023-10-07T05:16:07 pathbank
+> 2023-10-14T06:16:05 pathbank
 ### Update ID and Label TTL for pfam if check_id_label_filesize false or check_id_label_timestamp true
 # File output/id-label/pfam.ttl has no timestamp file
-# File output/id-label/pfam.ttl is created 6.88166176817544 days ago (will be updated when >5 days)
+# File output/id-label/pfam.ttl is created 7.041587325192894 days ago (will be updated when >5 days)
 ## Update output/id-label/pfam.ttl
-< 2023-10-07T05:16:07 pfam
+< 2023-10-14T06:16:05 pfam
 togoid-rdfize-id-label pfam
-> 2023-10-07T05:16:12 pfam
+> 2023-10-14T06:16:08 pfam
 ### Update ID and Label TTL for pubchem_pathway if check_id_label_filesize false or check_id_label_timestamp true
 # File output/id-label/pubchem_pathway.ttl has no timestamp file
-# File output/id-label/pubchem_pathway.ttl is created 6.881702434503495 days ago (will be updated when >5 days)
+# File output/id-label/pubchem_pathway.ttl is created 7.041614393354919 days ago (will be updated when >5 days)
 ## Update output/id-label/pubchem_pathway.ttl
-< 2023-10-07T05:16:12 pubchem_pathway
+< 2023-10-14T06:16:08 pubchem_pathway
 togoid-rdfize-id-label pubchem_pathway
-> 2023-10-07T05:16:13 pubchem_pathway
+> 2023-10-14T06:16:09 pubchem_pathway
 ### Update ID and Label TTL for refseq_rna if check_id_label_filesize false or check_id_label_timestamp false
 # File output/id-label/refseq_rna.ttl is newer than input/refseq_rna/download.lock
 # => Preserving output/ttl/refseq_rna.ttl
 ### Update ID and Label TTL for swisslipids if check_id_label_filesize false or check_id_label_timestamp true
 # File output/id-label/swisslipids.ttl is older than input/swisslipids/download.lock
 ## Update output/id-label/swisslipids.ttl
-< 2023-10-07T05:16:13 swisslipids
+< 2023-10-14T06:16:09 swisslipids
 togoid-rdfize-id-label swisslipids
-> 2023-10-07T05:16:23 swisslipids
+> 2023-10-14T06:16:14 swisslipids
+Rule for ID and Label TTL (output/id-label/cellosaurus.ttl)
+------------------------------
+Investigating output/id-label/cellosaurus.ttl
+class: Rake::FileTask
+task needed: true
+timestamp: 2023-10-07 05:16:06 +0900
+pre-requisites: 
+--output/id-label/ (<EARLY TIME>)
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
+................................
+
 Rule for ID and Label TTL (output/id-label/hmdb.ttl)
 ------------------------------
 Investigating output/id-label/hmdb.ttl
@@ -6800,8 +6976,8 @@ task needed: true
 timestamp: 2023-07-31 10:35:08 +0900
 pre-requisites: 
 --output/id-label/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for ID and Label TTL (output/id-label/cog.ttl)
@@ -6812,8 +6988,8 @@ task needed: true
 timestamp: 2023-07-29 07:19:26 +0900
 pre-requisites: 
 --output/id-label/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for ID and Label TTL (output/id-label/interpro.ttl)
@@ -6824,8 +7000,8 @@ task needed: true
 timestamp: 2023-09-19 05:28:25 +0900
 pre-requisites: 
 --output/id-label/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 Rule for ID and Label TTL (output/id-label/refseq_rna.ttl)
@@ -6836,9 +7012,9 @@ task needed: true
 timestamp: 2023-10-02 17:14:20 +0900
 pre-requisites: 
 --output/id-label/ (<EARLY TIME>)
---config/dataset.yaml (2023-10-06 17:00:13 +0900)
-latest-prerequisite time: 2023-10-06 17:00:13 +0900
+--config/dataset.yaml (2023-10-13 17:00:13 +0900)
+latest-prerequisite time: 2023-10-13 17:00:13 +0900
 ................................
 
 
-*** Finished: 2023-10-07T05:16:23 ***
+*** Finished: 2023-10-14T06:16:14 ***
diff --git a/ontology/class.tsv b/ontology/class.tsv
index 900418de..4e1eb9bb 100644
--- a/ontology/class.tsv
+++ b/ontology/class.tsv
@@ -31,3 +31,4 @@ Lipid	Lipid	Molecule
 Drug	Drug	
 Proteome	Proteome	
 Classification	Classification	
+AnnotationRule	Annotation rule	
diff --git a/ontology/dataset.tsv b/ontology/dataset.tsv
index ca48ff4e..a51fe3b5 100644
--- a/ontology/dataset.tsv
+++ b/ontology/dataset.tsv
@@ -57,11 +57,14 @@ oma_group	OMA group	Ortholog
 oma_protein	OMA protein	Protein
 omim_gene	OMIM gene	Gene
 omim_phenotype	OMIM phenotype	Phenotype
-orphanet	Orphanet	Phenotype
+orphanet_gene	Orphanet gene	Gene
+orphanet_phenotype	Orphanet phenotype	Phenotype
 pathbank	Pathbank	Pathway
 pdb	PDB	Structure
 pdb_ccd	PDB CCD	Compound
 pfam	Pfam	Domain
+prosite	PROSITE	Domain
+prosite_prorule	PROSITE ProRule	AnnotationRule
 pubchem_compound	PubChem compound	Compound
 pubchem_pathway	PubChem pathway	Pathway
 pubchem_substance	PubChem substance	Compound
@@ -74,6 +77,7 @@ refseq_rna	RefSeq RNA	Transcript
 rgd	RGD	Gene
 rhea	Rhea	Reaction
 sgd	SGD	Gene
+smart	SMART	Domain
 sra_accession	SRA accession	Submission
 sra_analysis	SRA analysis	Analysis
 sra_experiment	SRA experiment	Experiment
diff --git a/ontology/property.tsv b/ontology/property.tsv
index b8e82402..846c93db 100644
--- a/ontology/property.tsv
+++ b/ontology/property.tsv
@@ -111,3 +111,5 @@ TIO_000110	sequence is determined using sample	is determined using sample	TIO_00
 TIO_000111	sample is used to determine sequence	is used to determine sequence	TIO_000110	Sample	Sequence
 TIO_000112	gene codes protein participating in pathway	codes protein participating in	TIO_000113	Gene	Pathway
 TIO_000113	pathway has component coded by gene	has component coded by	TIO_000112	Pathway	Gene
+TIO_000114	domain has annotation rule	has annotation rule	TIO_000115	Domain	Function
+TIO_000115	is annotation rule of	is annotation rule of	TIO_000114	Function	Domain
diff --git a/ontology/togoid-ontology.html b/ontology/togoid-ontology.html
index 315a2832..60d4e7dd 100644
--- a/ontology/togoid-ontology.html
+++ b/ontology/togoid-ontology.html
@@ -116,7 +116,7 @@
 <tr>
 <td><a href="#Classes">
                                     Classes (
-                                    130
+                                    135
                                     )
                             </a></td>
 <td><select onChange="window.location.hash = document.getElementById('naviClass').value" id="naviClass"><option value="AffyProbeset">
@@ -125,6 +125,8 @@
 				tio:Analysis</option>
 <option value="Anatomy">
 				tio:Anatomy</option>
+<option value="AnnotationRule">
+				tio:AnnotationRule</option>
 <option value="AssemblyInsdc">
 				tio:AssemblyInsdc</option>
 <option value="AssemblyRefseq">
@@ -275,8 +277,10 @@
 				tio:OmimPhenotype</option>
 <option value="Organism">
 				tio:Organism</option>
-<option value="Orphanet">
-				tio:Orphanet</option>
+<option value="OrphanetGene">
+				tio:OrphanetGene</option>
+<option value="OrphanetPhenotype">
+				tio:OrphanetPhenotype</option>
 <option value="Ortholog">
 				tio:Ortholog</option>
 <option value="Pathbank">
@@ -295,6 +299,10 @@
 				tio:Probe</option>
 <option value="Project">
 				tio:Project</option>
+<option value="Prosite">
+				tio:Prosite</option>
+<option value="PrositeProrule">
+				tio:PrositeProrule</option>
 <option value="Protein">
 				tio:Protein</option>
 <option value="Proteome">
@@ -331,6 +339,8 @@
 				tio:SequenceRun</option>
 <option value="Sgd">
 				tio:Sgd</option>
+<option value="Smart">
+				tio:Smart</option>
 <option value="SraAccession">
 				tio:SraAccession</option>
 <option value="SraAnalysis">
@@ -406,7 +416,7 @@
 <tr>
 <td><a style="subPropertySearch" href="#SubProperties">
                                     Sub properties (
-                                    113
+                                    115
                                     )
                             </a></td>
 <td><select onChange="window.location.hash = window.location.hash = document.getElementById('navi5').value" id="navi5"><option value="TIO_000001">
@@ -634,7 +644,11 @@
 <option value="TIO_000112">
 				tio:TIO_000112</option>
 <option value="TIO_000113">
-				tio:TIO_000113</option></select></td>
+				tio:TIO_000113</option>
+<option value="TIO_000114">
+				tio:TIO_000114</option>
+<option value="TIO_000115">
+				tio:TIO_000115</option></select></td>
 </tr>
 <tr>
 <td><a href="#InstanceData">
@@ -746,6 +760,29 @@ <h2>
 </tbody>
 </table>
 <table class="subsection">
+<a name="http://togoid.dbcls.jp/ontology#AnnotationRule"></a><tbody>
+<tr><th id="AnnotationRule">
+				tio:AnnotationRule<span class="cp-type">
+								(rdf:type
+								<a href="http://www.w3.org/2002/07/owl#Class">
+					owl:Class</a>
+								)
+							</span>
+</th></tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#label">
+					rdfs:label</a></td>
+<td>Annotation rule</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Category">
+				tio:Category</a></td>
+</tr>
+</tbody>
+</table>
+<table class="subsection">
 <a name="http://togoid.dbcls.jp/ontology#AssemblyInsdc"></a><tbody>
 <tr><th id="AssemblyInsdc">
 				tio:AssemblyInsdc<span class="cp-type">
@@ -3127,9 +3164,9 @@ <h2>
 </tbody>
 </table>
 <table class="subsection">
-<a name="http://togoid.dbcls.jp/ontology#Orphanet"></a><tbody>
-<tr><th id="Orphanet">
-				tio:Orphanet<span class="cp-type">
+<a name="http://togoid.dbcls.jp/ontology#OrphanetGene"></a><tbody>
+<tr><th id="OrphanetGene">
+				tio:OrphanetGene<span class="cp-type">
 								(rdf:type
 								<a href="http://www.w3.org/2002/07/owl#Class">
 					owl:Class</a>
@@ -3139,12 +3176,46 @@ <h2>
 <tr>
 <td><a href="http://purl.org/dc/terms/identifier">
                                         dcterms:identifier</a></td>
-<td>orphanet</td>
+<td>orphanet_gene</td>
 </tr>
 <tr>
 <td><a href="http://www.w3.org/2000/01/rdf-schema#label">
 					rdfs:label</a></td>
-<td>Orphanet</td>
+<td>Orphanet gene</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Dataset">
+				tio:Dataset</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Gene">
+				tio:Gene</a></td>
+</tr>
+</tbody>
+</table>
+<table class="subsection">
+<a name="http://togoid.dbcls.jp/ontology#OrphanetPhenotype"></a><tbody>
+<tr><th id="OrphanetPhenotype">
+				tio:OrphanetPhenotype<span class="cp-type">
+								(rdf:type
+								<a href="http://www.w3.org/2002/07/owl#Class">
+					owl:Class</a>
+								)
+							</span>
+</th></tr>
+<tr>
+<td><a href="http://purl.org/dc/terms/identifier">
+                                        dcterms:identifier</a></td>
+<td>orphanet_phenotype</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#label">
+					rdfs:label</a></td>
+<td>Orphanet phenotype</td>
 </tr>
 <tr>
 <td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
@@ -3412,6 +3483,74 @@ <h2>
 </tbody>
 </table>
 <table class="subsection">
+<a name="http://togoid.dbcls.jp/ontology#Prosite"></a><tbody>
+<tr><th id="Prosite">
+				tio:Prosite<span class="cp-type">
+								(rdf:type
+								<a href="http://www.w3.org/2002/07/owl#Class">
+					owl:Class</a>
+								)
+							</span>
+</th></tr>
+<tr>
+<td><a href="http://purl.org/dc/terms/identifier">
+                                        dcterms:identifier</a></td>
+<td>prosite</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#label">
+					rdfs:label</a></td>
+<td>PROSITE</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Dataset">
+				tio:Dataset</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Domain">
+				tio:Domain</a></td>
+</tr>
+</tbody>
+</table>
+<table class="subsection">
+<a name="http://togoid.dbcls.jp/ontology#PrositeProrule"></a><tbody>
+<tr><th id="PrositeProrule">
+				tio:PrositeProrule<span class="cp-type">
+								(rdf:type
+								<a href="http://www.w3.org/2002/07/owl#Class">
+					owl:Class</a>
+								)
+							</span>
+</th></tr>
+<tr>
+<td><a href="http://purl.org/dc/terms/identifier">
+                                        dcterms:identifier</a></td>
+<td>prosite_prorule</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#label">
+					rdfs:label</a></td>
+<td>PROSITE ProRule</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#AnnotationRule">
+				tio:AnnotationRule</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Dataset">
+				tio:Dataset</a></td>
+</tr>
+</tbody>
+</table>
+<table class="subsection">
 <a name="http://togoid.dbcls.jp/ontology#Protein"></a><tbody>
 <tr><th id="Protein">
 				tio:Protein<span class="cp-type">
@@ -3970,6 +4109,40 @@ <h2>
 </tbody>
 </table>
 <table class="subsection">
+<a name="http://togoid.dbcls.jp/ontology#Smart"></a><tbody>
+<tr><th id="Smart">
+				tio:Smart<span class="cp-type">
+								(rdf:type
+								<a href="http://www.w3.org/2002/07/owl#Class">
+					owl:Class</a>
+								)
+							</span>
+</th></tr>
+<tr>
+<td><a href="http://purl.org/dc/terms/identifier">
+                                        dcterms:identifier</a></td>
+<td>smart</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#label">
+					rdfs:label</a></td>
+<td>SMART</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Dataset">
+				tio:Dataset</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subClassOf">
+					rdfs:subClassOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Domain">
+				tio:Domain</a></td>
+</tr>
+</tbody>
+</table>
+<table class="subsection">
 <a name="http://togoid.dbcls.jp/ontology#SraAccession"></a><tbody>
 <tr><th id="SraAccession">
 				tio:SraAccession<span class="cp-type">
@@ -9966,6 +10139,98 @@ <h3 id="SubProperties">Sub properties</h3>
 </tr>
 </tbody>
 </table>
+<table class="subsection">
+<a name="http://togoid.dbcls.jp/ontology#TIO_000114"></a><tbody>
+<tr><th id="TIO_000114">
+				tio:TIO_000114<span class="cp-type">
+								(rdf:type
+								<a href="http://www.w3.org/1999/02/22-rdf-syntax-ns#Description">
+					rdf:Description</a>
+								)
+							</span>
+</th></tr>
+<tr>
+<td><a href="http://togoid.dbcls.jp/ontology#display_label">
+					tio:display_label</a></td>
+<td>has annotation rule</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#domain">
+					rdfs:domain</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Domain">
+				tio:Domain</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#label">
+					rdfs:label</a></td>
+<td>domain has annotation rule</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#range">
+					rdfs:range</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Function">
+				tio:Function</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subPropertyOf">
+					rdfs:subPropertyOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#relation">
+				tio:relation</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2002/07/owl#inverseOf">
+					owl:inverseOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#TIO_000115">
+				tio:TIO_000115</a></td>
+</tr>
+</tbody>
+</table>
+<table class="subsection">
+<a name="http://togoid.dbcls.jp/ontology#TIO_000115"></a><tbody>
+<tr><th id="TIO_000115">
+				tio:TIO_000115<span class="cp-type">
+								(rdf:type
+								<a href="http://www.w3.org/1999/02/22-rdf-syntax-ns#Description">
+					rdf:Description</a>
+								)
+							</span>
+</th></tr>
+<tr>
+<td><a href="http://togoid.dbcls.jp/ontology#display_label">
+					tio:display_label</a></td>
+<td>is annotation rule of</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#domain">
+					rdfs:domain</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Function">
+				tio:Function</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#label">
+					rdfs:label</a></td>
+<td>is annotation rule of</td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#range">
+					rdfs:range</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#Domain">
+				tio:Domain</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2000/01/rdf-schema#subPropertyOf">
+					rdfs:subPropertyOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#relation">
+				tio:relation</a></td>
+</tr>
+<tr>
+<td><a href="http://www.w3.org/2002/07/owl#inverseOf">
+					owl:inverseOf</a></td>
+<td><a href="http://togoid.dbcls.jp/ontology#TIO_000114">
+				tio:TIO_000114</a></td>
+</tr>
+</tbody>
+</table>
 </div>
 </div>
 <div class="nice" id="section_InstanceData" style="position: relative;"><div class="nice-content" id="InstanceData"></div></div>
diff --git a/ontology/togoid-ontology.nt b/ontology/togoid-ontology.nt
index 23d95215..85114532 100644
--- a/ontology/togoid-ontology.nt
+++ b/ontology/togoid-ontology.nt
@@ -113,6 +113,9 @@
 <http://togoid.dbcls.jp/ontology#Classification> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
 <http://togoid.dbcls.jp/ontology#Classification> <http://www.w3.org/2000/01/rdf-schema#label> "Classification" .
 <http://togoid.dbcls.jp/ontology#Classification> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Category> .
+<http://togoid.dbcls.jp/ontology#AnnotationRule> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://togoid.dbcls.jp/ontology#AnnotationRule> <http://www.w3.org/2000/01/rdf-schema#label> "Annotation rule" .
+<http://togoid.dbcls.jp/ontology#AnnotationRule> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Category> .
 <http://togoid.dbcls.jp/ontology#AffyProbeset> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
 <http://togoid.dbcls.jp/ontology#AffyProbeset> <http://purl.org/dc/terms/identifier> "affy_probeset" .
 <http://togoid.dbcls.jp/ontology#AffyProbeset> <http://www.w3.org/2000/01/rdf-schema#label> "Affymetrix probeset" .
@@ -409,11 +412,16 @@
 <http://togoid.dbcls.jp/ontology#OmimPhenotype> <http://www.w3.org/2000/01/rdf-schema#label> "OMIM phenotype" .
 <http://togoid.dbcls.jp/ontology#OmimPhenotype> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Phenotype> .
 <http://togoid.dbcls.jp/ontology#OmimPhenotype> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
-<http://togoid.dbcls.jp/ontology#Orphanet> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
-<http://togoid.dbcls.jp/ontology#Orphanet> <http://purl.org/dc/terms/identifier> "orphanet" .
-<http://togoid.dbcls.jp/ontology#Orphanet> <http://www.w3.org/2000/01/rdf-schema#label> "Orphanet" .
-<http://togoid.dbcls.jp/ontology#Orphanet> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Phenotype> .
-<http://togoid.dbcls.jp/ontology#Orphanet> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
+<http://togoid.dbcls.jp/ontology#OrphanetGene> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://togoid.dbcls.jp/ontology#OrphanetGene> <http://purl.org/dc/terms/identifier> "orphanet_gene" .
+<http://togoid.dbcls.jp/ontology#OrphanetGene> <http://www.w3.org/2000/01/rdf-schema#label> "Orphanet gene" .
+<http://togoid.dbcls.jp/ontology#OrphanetGene> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Gene> .
+<http://togoid.dbcls.jp/ontology#OrphanetGene> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
+<http://togoid.dbcls.jp/ontology#OrphanetPhenotype> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://togoid.dbcls.jp/ontology#OrphanetPhenotype> <http://purl.org/dc/terms/identifier> "orphanet_phenotype" .
+<http://togoid.dbcls.jp/ontology#OrphanetPhenotype> <http://www.w3.org/2000/01/rdf-schema#label> "Orphanet phenotype" .
+<http://togoid.dbcls.jp/ontology#OrphanetPhenotype> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Phenotype> .
+<http://togoid.dbcls.jp/ontology#OrphanetPhenotype> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
 <http://togoid.dbcls.jp/ontology#Pathbank> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
 <http://togoid.dbcls.jp/ontology#Pathbank> <http://purl.org/dc/terms/identifier> "pathbank" .
 <http://togoid.dbcls.jp/ontology#Pathbank> <http://www.w3.org/2000/01/rdf-schema#label> "Pathbank" .
@@ -434,6 +442,16 @@
 <http://togoid.dbcls.jp/ontology#Pfam> <http://www.w3.org/2000/01/rdf-schema#label> "Pfam" .
 <http://togoid.dbcls.jp/ontology#Pfam> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Domain> .
 <http://togoid.dbcls.jp/ontology#Pfam> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
+<http://togoid.dbcls.jp/ontology#Prosite> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://togoid.dbcls.jp/ontology#Prosite> <http://purl.org/dc/terms/identifier> "prosite" .
+<http://togoid.dbcls.jp/ontology#Prosite> <http://www.w3.org/2000/01/rdf-schema#label> "PROSITE" .
+<http://togoid.dbcls.jp/ontology#Prosite> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Domain> .
+<http://togoid.dbcls.jp/ontology#Prosite> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
+<http://togoid.dbcls.jp/ontology#PrositeProrule> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://togoid.dbcls.jp/ontology#PrositeProrule> <http://purl.org/dc/terms/identifier> "prosite_prorule" .
+<http://togoid.dbcls.jp/ontology#PrositeProrule> <http://www.w3.org/2000/01/rdf-schema#label> "PROSITE ProRule" .
+<http://togoid.dbcls.jp/ontology#PrositeProrule> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#AnnotationRule> .
+<http://togoid.dbcls.jp/ontology#PrositeProrule> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
 <http://togoid.dbcls.jp/ontology#PubchemCompound> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
 <http://togoid.dbcls.jp/ontology#PubchemCompound> <http://purl.org/dc/terms/identifier> "pubchem_compound" .
 <http://togoid.dbcls.jp/ontology#PubchemCompound> <http://www.w3.org/2000/01/rdf-schema#label> "PubChem compound" .
@@ -494,6 +512,11 @@
 <http://togoid.dbcls.jp/ontology#Sgd> <http://www.w3.org/2000/01/rdf-schema#label> "SGD" .
 <http://togoid.dbcls.jp/ontology#Sgd> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Gene> .
 <http://togoid.dbcls.jp/ontology#Sgd> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
+<http://togoid.dbcls.jp/ontology#Smart> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
+<http://togoid.dbcls.jp/ontology#Smart> <http://purl.org/dc/terms/identifier> "smart" .
+<http://togoid.dbcls.jp/ontology#Smart> <http://www.w3.org/2000/01/rdf-schema#label> "SMART" .
+<http://togoid.dbcls.jp/ontology#Smart> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Domain> .
+<http://togoid.dbcls.jp/ontology#Smart> <http://www.w3.org/2000/01/rdf-schema#subClassOf> <http://togoid.dbcls.jp/ontology#Dataset> .
 <http://togoid.dbcls.jp/ontology#SraAccession> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#Class> .
 <http://togoid.dbcls.jp/ontology#SraAccession> <http://purl.org/dc/terms/identifier> "sra_accession" .
 <http://togoid.dbcls.jp/ontology#SraAccession> <http://www.w3.org/2000/01/rdf-schema#label> "SRA accession" .
@@ -1265,3 +1288,15 @@
 <http://togoid.dbcls.jp/ontology#TIO_000113> <http://www.w3.org/2002/07/owl#inverseOf> <http://togoid.dbcls.jp/ontology#TIO_000112> .
 <http://togoid.dbcls.jp/ontology#TIO_000113> <http://www.w3.org/2000/01/rdf-schema#label> "pathway has component coded by gene" .
 <http://togoid.dbcls.jp/ontology#TIO_000113> <http://togoid.dbcls.jp/ontology#display_label> "has component coded by" .
+<http://togoid.dbcls.jp/ontology#TIO_000114> <http://www.w3.org/2000/01/rdf-schema#subPropertyOf> <http://togoid.dbcls.jp/ontology#relation> .
+<http://togoid.dbcls.jp/ontology#TIO_000114> <http://www.w3.org/2000/01/rdf-schema#domain> <http://togoid.dbcls.jp/ontology#Domain> .
+<http://togoid.dbcls.jp/ontology#TIO_000114> <http://www.w3.org/2000/01/rdf-schema#range> <http://togoid.dbcls.jp/ontology#Function> .
+<http://togoid.dbcls.jp/ontology#TIO_000114> <http://www.w3.org/2002/07/owl#inverseOf> <http://togoid.dbcls.jp/ontology#TIO_000115> .
+<http://togoid.dbcls.jp/ontology#TIO_000114> <http://www.w3.org/2000/01/rdf-schema#label> "domain has annotation rule" .
+<http://togoid.dbcls.jp/ontology#TIO_000114> <http://togoid.dbcls.jp/ontology#display_label> "has annotation rule" .
+<http://togoid.dbcls.jp/ontology#TIO_000115> <http://www.w3.org/2000/01/rdf-schema#subPropertyOf> <http://togoid.dbcls.jp/ontology#relation> .
+<http://togoid.dbcls.jp/ontology#TIO_000115> <http://www.w3.org/2000/01/rdf-schema#domain> <http://togoid.dbcls.jp/ontology#Function> .
+<http://togoid.dbcls.jp/ontology#TIO_000115> <http://www.w3.org/2000/01/rdf-schema#range> <http://togoid.dbcls.jp/ontology#Domain> .
+<http://togoid.dbcls.jp/ontology#TIO_000115> <http://www.w3.org/2002/07/owl#inverseOf> <http://togoid.dbcls.jp/ontology#TIO_000114> .
+<http://togoid.dbcls.jp/ontology#TIO_000115> <http://www.w3.org/2000/01/rdf-schema#label> "is annotation rule of" .
+<http://togoid.dbcls.jp/ontology#TIO_000115> <http://togoid.dbcls.jp/ontology#display_label> "is annotation rule of" .
diff --git a/ontology/togoid-ontology.rdf b/ontology/togoid-ontology.rdf
index ae616eee..c0573adf 100644
--- a/ontology/togoid-ontology.rdf
+++ b/ontology/togoid-ontology.rdf
@@ -20,6 +20,10 @@
     <rdfs:label>Anatomy</rdfs:label>
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Category"/>
   </owl:Class>
+  <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#AnnotationRule">
+    <rdfs:label>Annotation rule</rdfs:label>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Category"/>
+  </owl:Class>
   <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#AssemblyInsdc">
     <dcterms:identifier>assembly_insdc</dcterms:identifier>
     <rdfs:label>Assembly INSDC</rdfs:label>
@@ -439,9 +443,15 @@
     <rdfs:label>Organism</rdfs:label>
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Category"/>
   </owl:Class>
-  <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#Orphanet">
-    <dcterms:identifier>orphanet</dcterms:identifier>
-    <rdfs:label>Orphanet</rdfs:label>
+  <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#OrphanetGene">
+    <dcterms:identifier>orphanet_gene</dcterms:identifier>
+    <rdfs:label>Orphanet gene</rdfs:label>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Dataset"/>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Gene"/>
+  </owl:Class>
+  <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#OrphanetPhenotype">
+    <dcterms:identifier>orphanet_phenotype</dcterms:identifier>
+    <rdfs:label>Orphanet phenotype</rdfs:label>
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Dataset"/>
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Phenotype"/>
   </owl:Class>
@@ -489,6 +499,18 @@
     <rdfs:label>Project</rdfs:label>
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Category"/>
   </owl:Class>
+  <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#Prosite">
+    <dcterms:identifier>prosite</dcterms:identifier>
+    <rdfs:label>PROSITE</rdfs:label>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Dataset"/>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Domain"/>
+  </owl:Class>
+  <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#PrositeProrule">
+    <dcterms:identifier>prosite_prorule</dcterms:identifier>
+    <rdfs:label>PROSITE ProRule</rdfs:label>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#AnnotationRule"/>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Dataset"/>
+  </owl:Class>
   <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#Protein">
     <rdfs:label>Protein</rdfs:label>
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Category"/>
@@ -587,6 +609,12 @@
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Dataset"/>
     <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Gene"/>
   </owl:Class>
+  <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#Smart">
+    <dcterms:identifier>smart</dcterms:identifier>
+    <rdfs:label>SMART</rdfs:label>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Dataset"/>
+    <rdfs:subClassOf rdf:resource="http://togoid.dbcls.jp/ontology#Domain"/>
+  </owl:Class>
   <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#SraAccession">
     <dcterms:identifier>sra_accession</dcterms:identifier>
     <rdfs:label>SRA accession</rdfs:label>
@@ -1542,6 +1570,22 @@
     <rdfs:subPropertyOf rdf:resource="http://togoid.dbcls.jp/ontology#relation"/>
     <owl:inverseOf rdf:resource="http://togoid.dbcls.jp/ontology#TIO_000112"/>
   </rdf:Description>
+  <rdf:Description rdf:about="http://togoid.dbcls.jp/ontology#TIO_000114">
+    <display_label>has annotation rule</display_label>
+    <rdfs:domain rdf:resource="http://togoid.dbcls.jp/ontology#Domain"/>
+    <rdfs:label>domain has annotation rule</rdfs:label>
+    <rdfs:range rdf:resource="http://togoid.dbcls.jp/ontology#Function"/>
+    <rdfs:subPropertyOf rdf:resource="http://togoid.dbcls.jp/ontology#relation"/>
+    <owl:inverseOf rdf:resource="http://togoid.dbcls.jp/ontology#TIO_000115"/>
+  </rdf:Description>
+  <rdf:Description rdf:about="http://togoid.dbcls.jp/ontology#TIO_000115">
+    <display_label>is annotation rule of</display_label>
+    <rdfs:domain rdf:resource="http://togoid.dbcls.jp/ontology#Function"/>
+    <rdfs:label>is annotation rule of</rdfs:label>
+    <rdfs:range rdf:resource="http://togoid.dbcls.jp/ontology#Domain"/>
+    <rdfs:subPropertyOf rdf:resource="http://togoid.dbcls.jp/ontology#relation"/>
+    <owl:inverseOf rdf:resource="http://togoid.dbcls.jp/ontology#TIO_000114"/>
+  </rdf:Description>
   <owl:Class rdf:about="http://togoid.dbcls.jp/ontology#Tair">
     <dcterms:identifier>tair</dcterms:identifier>
     <rdfs:label>TAIR</rdfs:label>
diff --git a/ontology/togoid-ontology.ttl b/ontology/togoid-ontology.ttl
index fb6ecf28..81ba176c 100644
--- a/ontology/togoid-ontology.ttl
+++ b/ontology/togoid-ontology.ttl
@@ -187,6 +187,11 @@
     rdfs:label "Classification" ;
     rdfs:subClassOf :Category .
 
+:AnnotationRule
+    a owl:Class ;
+    rdfs:label "Annotation rule" ;
+    rdfs:subClassOf :Category .
+
 :AffyProbeset
     a owl:Class ;
     dcterms:identifier "affy_probeset" ;
@@ -541,10 +546,16 @@
     rdfs:label "OMIM phenotype" ;
     rdfs:subClassOf :Phenotype, :Dataset .
 
-:Orphanet
+:OrphanetGene
+    a owl:Class ;
+    dcterms:identifier "orphanet_gene" ;
+    rdfs:label "Orphanet gene" ;
+    rdfs:subClassOf :Gene, :Dataset .
+
+:OrphanetPhenotype
     a owl:Class ;
-    dcterms:identifier "orphanet" ;
-    rdfs:label "Orphanet" ;
+    dcterms:identifier "orphanet_phenotype" ;
+    rdfs:label "Orphanet phenotype" ;
     rdfs:subClassOf :Phenotype, :Dataset .
 
 :Pathbank
@@ -571,6 +582,18 @@
     rdfs:label "Pfam" ;
     rdfs:subClassOf :Domain, :Dataset .
 
+:Prosite
+    a owl:Class ;
+    dcterms:identifier "prosite" ;
+    rdfs:label "PROSITE" ;
+    rdfs:subClassOf :Domain, :Dataset .
+
+:PrositeProrule
+    a owl:Class ;
+    dcterms:identifier "prosite_prorule" ;
+    rdfs:label "PROSITE ProRule" ;
+    rdfs:subClassOf :AnnotationRule, :Dataset .
+
 :PubchemCompound
     a owl:Class ;
     dcterms:identifier "pubchem_compound" ;
@@ -643,6 +666,12 @@
     rdfs:label "SGD" ;
     rdfs:subClassOf :Gene, :Dataset .
 
+:Smart
+    a owl:Class ;
+    dcterms:identifier "smart" ;
+    rdfs:label "SMART" ;
+    rdfs:subClassOf :Domain, :Dataset .
+
 :SraAccession
     a owl:Class ;
     dcterms:identifier "sra_accession" ;
@@ -1656,3 +1685,19 @@
     rdfs:label "pathway has component coded by gene" ;
     :display_label "has component coded by" .
 
+:TIO_000114
+    rdfs:subPropertyOf :relation ;
+    rdfs:domain :Domain ;
+    rdfs:range :Function ;
+    owl:inverseOf :TIO_000115 ;
+    rdfs:label "domain has annotation rule" ;
+    :display_label "has annotation rule" .
+
+:TIO_000115
+    rdfs:subPropertyOf :relation ;
+    rdfs:domain :Function ;
+    rdfs:range :Domain ;
+    owl:inverseOf :TIO_000114 ;
+    rdfs:label "is annotation rule of" ;
+    :display_label "is annotation rule of" .
+