Add Ultralytics actions workflow in format.yml (#4)

Co-authored-by: glenn-jocher <[email protected]>
ultralytics · Jan 1, 2024 · 6ca0e63 · 6ca0e63
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diff --git a/.github/workflows/format.yml b/.github/workflows/format.yml
@@ -0,0 +1,20 @@
+# Ultralytics 🚀, AGPL-3.0 license
+# Ultralytics Format Workflow
+# This workflow automatically formats code and documentation in pull requests and pushes to main branch
+
+name: Ultralytics Actions
+
+on:
+  push:
+    branches: [main,master]
+  pull_request:
+    branches: [main,master]
+
+jobs:
+  format:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout Repository
+        uses: actions/checkout@v4
+      - name: Run Ultralytics Formatting Actions
+        uses: ultralytics/actions@main
diff --git a/C/solidanglec.cpp b/C/solidanglec.cpp
@@ -48,7 +48,7 @@ void cfunction(double* X, double* P, double* N, double* pa, double* al, double*
             dz = P[j+2*MP] - z;
             dotproduct = N[j]*dx + N[j+MP]*dy + N[j+2*MP]*dz;
 
-            if (dotproduct>0) // possible transmition
+            if (dotproduct>0) // possible transmission
             {            
                 rs = dx*dx + dy*dy + dz*dz;
                 r[k] = sqrt(rs);

diff --git a/LIBRARIES/MATERIALS/CERN Index of Refraction.pdf b/LIBRARIES/MATERIALS/CERN Index of Refraction.pdf
diff --git a/LIBRARIES/MATERIALS/NIMA522-439PKL.pdf b/LIBRARIES/MATERIALS/NIMA522-439PKL.pdf
diff --git a/LIBRARIES/MATERIALS/OlegThesis.pdf b/LIBRARIES/MATERIALS/OlegThesis.pdf
diff --git a/ML/FASTNEUTRON/fcnplotneutronMC.m b/ML/FASTNEUTRON/fcnplotneutronMC.m
@@ -31,7 +31,7 @@
     a(:,4) = MC.xhat(:,10,i) - MC.xhat(:,4,i) > 1; %dt > 1ns
     a(:,5) = fcnrange(MC.xhat(:,1:3,i) - MC.xhat(:,7:9,i)) > 10; %dx > 10mm
     a(:,6) = MC.xhat(:,5,i)>0.200; %.3 %first bounce > 100keV
-    a(:,7) = MC.xhat(:,6,i)./MC.xhat(:,12,i) > .2; %dE1/dE2 must be greather than 0.20
+    a(:,7) = MC.xhat(:,6,i)./MC.xhat(:,12,i) > .2; %dE1/dE2 must be greater than 0.20
     a(:,8) = MC.xhat(:,5,i)./MC.xhat(:,18,i) < .9; %dE1./E0 < 0.9
     a(:,9) = MC.xhat(:,5,i)./MC.xhat(:,18,i) > .1; %dE1./E0 > 0.1
     a(:,10) = MC.xhat(:,18,i) < 6; %(MeV) E0<20MeV

diff --git a/ML/FASTNEUTRON/fcnplotneutronTS.m b/ML/FASTNEUTRON/fcnplotneutronTS.m
@@ -32,7 +32,7 @@
     a(:,4) = MC.xhat(:,10,i) - MC.xhat(:,4,i) > 1; %dt > 1ns
     a(:,5) = fcnrange(MC.xhat(:,1:3,i) - MC.xhat(:,7:9,i)) > 10; %dx > 10mm
     a(:,6) = MC.xhat(:,5,i)>0.200; %.3 %first bounce > 100keV
-    a(:,7) = MC.xhat(:,6,i)./MC.xhat(:,12,i) > .2; %dE1/dE2 must be greather than 0.20
+    a(:,7) = MC.xhat(:,6,i)./MC.xhat(:,12,i) > .2; %dE1/dE2 must be greater than 0.20
     a(:,8) = MC.xhat(:,5,i)./MC.xhat(:,18,i) < .9; %dE1./E0 < 0.9
     a(:,9) = MC.xhat(:,5,i)./MC.xhat(:,18,i) > .1; %dE1./E0 > 0.1
     %a(:,10) = fcninsidedetector(MC.xhat(:,1:3,i), input, 10); %P1 wall cut

diff --git a/ML/fcnoptimizerkr.m b/ML/fcnoptimizerkr.m
@@ -1,5 +1,5 @@
 function k = fcnoptimizerkr(input,output)
-%reduced version of optimzer constants using only active pixels
+%reduced version of optimizer constants using only active pixels
 k = fcnoptimizerk(input,output(1).N);
 
 ti = output.t~=0;  

diff --git a/MTC/DataAnalysis/plotAnalysis.m b/MTC/DataAnalysis/plotAnalysis.m
@@ -31,8 +31,8 @@
     c = ones(size(X,1),1);
 end
 
-i=any(c==[1 2 4 5],2);  fprintf('%g category (1,2,4,5) events over %g runs for %.4g days of reactor ON live-time\n',sum(i),numel(unique(X(i,1))),livetime(X(i,:)));
-i=any(c==6,2);  fprintf('%g category 6 events over %g runs for %.4g days of reactor OFF live-time\n',sum(i),numel(unique(X(i,1))),livetime(X(i,:)));
+i=any(c==[1 2 4 5],2);  fprintf('%g category (1,2,4,5) events over %g runs for %.4g days of reactor ON live-time\n',sum(i),numel(unique(X(i,1))),lifetime(X(i,:)));
+i=any(c==6,2);  fprintf('%g category 6 events over %g runs for %.4g days of reactor OFF live-time\n',sum(i),numel(unique(X(i,1))),lifetime(X(i,:)));
 i=any(c==[1 2 4 5],2);  
 X=X(i,:);  ne=sum(i);
 
@@ -215,7 +215,7 @@ function gfit(X,filename)
 fclose(fid);
 end
 
-function days=livetime(X)
+function days=lifetime(X)
 runs=unique(X(:,1));  n=numel(runs);  T=X(:,3)/1E6;  i=T~=0 & ~isnan(T); T=T(i); X=X(i,:);  t=0;
 for i=1:n
     ti=T(X(:,1)==runs(i));

diff --git a/plotFunctions/fcnplotdetectorprojection.m b/plotFunctions/fcnplotdetectorprojection.m
@@ -29,7 +29,7 @@ function fcnplotdetectorprojection(input,iap,fxva,p0,proj,label)
 
 i=find(cm(:,1)<-100 & cm(:,2)>100);  %j = cm(i,1)==-180;  j=i(j);  i=i(~j);  cm(j,[1 4]) = cm(j,[1 4])+360;
 if any(i) %pixels wrapping around the 180deg line
-    if all(p0==0) %we can split pixels, but p0 must be in center of detector to make left and right symetric!
+    if all(p0==0) %we can split pixels, but p0 must be in center of detector to make left and right symmetric!
         cm(i,2:3)=-180;  cm=[cm; -cm(i,:)];  rm=[rm; rm(i,:)];  fxva=[fxva; fxva(i)]; %SPLIT PIXELS IN HALF LEFT AND RIGHT
     else
         cm(i,2:3) = cm(i,2:3)-360; %EXTEND WRAPPED PIXELS TO THE LEFT

diff --git a/tests/NTC/fcndisambiguate.m b/tests/NTC/fcndisambiguate.m
@@ -129,7 +129,7 @@
 t = (t1+t2 - l/speed)/2; %ns
 y = interp1c(1:pmt.strips,pmt.stripx, (L(:,2)+R(:,2))/2); %mm from center
 
-%BREAK DOWN LARGE PULSES INTO SMALLER SINLGES
+%BREAK DOWN LARGE PULSES INTO SMALLER SINGLES
 a=floor( (L(:,3)+R(:,3))/2/dSPRamplitude ); ma=max(a);
 if ma>1
     c=cell(ma,1); tb=c; xb=c; yb=c;  tb{1}=t; xb{1}=x; yb{1}=y;

diff --git a/tests/Plutonium Simulation/fcnML123.m b/tests/Plutonium Simulation/fcnML123.m
@@ -11,7 +11,7 @@
 om1     = ones(input.nxy^2, input.nrp);
 L       = zeros(input.nxy^2, input.nrp);
 ov1     = ones(input.nxy^2, 1);
-nbatch  = 100; %number of measurments per batch max
+nbatch  = 100; %number of measurements per batch max
 sk      = table.mev.de/4/pi; %stabilizing constant
 pdfur   = zeros(input.nxy^2, nbatch);
 vnrp    = 1:input.nrp;
@@ -65,7 +65,7 @@
 
     %ML2-------------------------------------------------------------------
     if flags.status.ML2 && Ci>0
-        zn = accumarray(d1.z.eic, 1, [table.mev.ne 1]); %measurments per bin;
+        zn = accumarray(d1.z.eic, 1, [table.mev.ne 1]); %measurements per bin;
         epdf = e(1)*d1.epdf.kr + e(2)*d1.epdf.mantle + e(3)*d1.epdf.crust + e(4)*d1.epdf.fastneutron + e(5)*d1.epdf.accidental + e(6)*d1.epdf.cosmogenic;
         if flags.status.CRLB
            zn = d1.epdf.all*table.mev.de;

diff --git a/tests/Plutonium Simulation/fcnfindplutonium2.m b/tests/Plutonium Simulation/fcnfindplutonium2.m
@@ -157,8 +157,8 @@
 function [d, s, DEM] = fcngetpositions()
 %GET GE IMAGE -------------------------------------------------------------
 %cam.ssge = [8 2560-720-77 1280 720];  %1080x720; 27" 27" dual monitor hack
-%hge = actxserver('googleearth.ApplicationGE'); %Create a COM server running Google Earth
-%DEM = fcngetGEDEM(hge,70);  fcnFinishStreamProgress(hge);  x=getscreen(cam.ssge);  DEM.cdata = x.cdata;  save DEMHamburg.mat DEM
+%he = actxserver('googleearth.ApplicationGE'); %Create a COM server running Google Earth
+%DEM = fcngetGEDEM(he,70);  fcnFinishStreamProgress(he);  x=getscreen(cam.ssge);  DEM.cdata = x.cdata;  save DEMHamburg.mat DEM
 %MOL Cosmos, Panama
 
 load DEMHamburg
@@ -229,7 +229,7 @@
     a(:,4) = MC.xhat(:,10,i) - MC.xhat(:,4,i) > 1; %dt > 1ns
     a(:,5) = fcnrange(MC.xhat(:,1:3,i) - MC.xhat(:,7:9,i)) > 10; %dx > 10mm
     a(:,6) = MC.xhat(:,5,i)>0.200; %.3 %first bounce > 100keV
-    a(:,7) = MC.xhat(:,6,i)./MC.xhat(:,12,i) > .2; %dE1/dE2 must be greather than 0.20
+    a(:,7) = MC.xhat(:,6,i)./MC.xhat(:,12,i) > .2; %dE1/dE2 must be greater than 0.20
     a(:,8) = MC.xhat(:,5,i)./MC.xhat(:,18,i) < .9; %dE1./E0 < 0.9
     a(:,9) = MC.xhat(:,5,i)./MC.xhat(:,18,i) > .1; %dE1./E0 > 0.1
     a(:,10) = MC.xhat(:,5,i)<3; %.3 %first bounce > 100keV

diff --git a/tests/Reactor Simulation/Muons/rastin_JoPG10_1984_1609.pdf b/tests/Reactor Simulation/Muons/rastin_JoPG10_1984_1609.pdf
diff --git a/tests/Reactor Simulation/Neutrons/Goldhagen IEEE.pdf b/tests/Reactor Simulation/Neutrons/Goldhagen IEEE.pdf
diff --git a/tests/Reactor Simulation/Neutrons/neutron sheilding/attenuationLengths.m b/tests/Reactor Simulation/Neutrons/neutron sheilding/attenuationLengths.m
@@ -8,7 +8,7 @@
 [angstroms x]
 
 %[nuetron_angstroms, neutron_MeV, 'Linear Attenuation Factor (cm^-1)']
-tabel=[ 8.941   1.0233e-09      4.690
+table=[ 8.941   1.0233e-09      4.690
        6.3917   2.0024e-09      4.655
        4.6935   3.7135e-09      4.632
        3.6366   6.1854e-09      4.618

diff --git a/tests/Reactor Simulation/fcnReactorCollection.m b/tests/Reactor Simulation/fcnReactorCollection.m
@@ -32,7 +32,7 @@
 flux(4) = 51 * area * rp/20; %Reactor Gammas/s
 flux(5) = 25 * area; %Atmospheric Gammas/s
 flux(6) = .0165 * area; %Muons/s  .0165/cm^2/s
-%flux = flux.*(1-[0 .9869 .9869 .9923 .9923 .6242]'); %Sheilding fractions
+%flux = flux.*(1-[0 .9869 .9869 .9923 .9923 .6242]'); %Shielding fractions
 
 
 %flux = [snuebar.n, 0, 0.05, 0, 13, 4]';

diff --git a/tests/Reactor Simulation/fcngetobservedspectra.m b/tests/Reactor Simulation/fcngetobservedspectra.m
@@ -34,7 +34,7 @@
         case {4,5} %reactor and atmospheric gammas
             MC = getcandidatefractions(fnames{fi});
 
-            pf = getGammaTransInLead(MC.MeVVector, shield.lead)'; sf = 1-pf;  %pass and sheilded fractions (5cm lead)
+            pf = getGammaTransInLead(MC.MeVVector, shield.lead)'; sf = 1-pf;  %pass and shielded fractions (5cm lead)
             MC.fraction = MC.fraction.*pf;
             MC.fraction(:,end+1) = sf;
             legendstr{9} = sprintf('Shielded %.0fcm lead',shield.lead);

diff --git a/tests/Reactor Simulation/pdfs/4 Particle Efficiencies v2.pdf b/tests/Reactor Simulation/pdfs/4 Particle Efficiencies v2.pdf
diff --git a/tests/Reactor Simulation/pdfs/4 particle Efficiencies v3.pdf b/tests/Reactor Simulation/pdfs/4 particle Efficiencies v3.pdf
diff --git a/tests/Reactor Simulation/pdfs/4 particle Efficiencies v6.pdf b/tests/Reactor Simulation/pdfs/4 particle Efficiencies v6.pdf