Merge pull request #881 from kysrpex/freebayes

freebayes: Dynamic memory allocation
usegalaxy-eu · Sep 1, 2023 · b45f9e0 · b45f9e0
2 parents 4ace7fc + 7cdcfd2
commit b45f9e0
Showing 1 changed file with 5 additions and 0 deletions.
diff --git a/files/galaxy/tpv/tools.yml b/files/galaxy/tpv/tools.yml
@@ -688,6 +688,11 @@ tools:
       - if: input_size >= 25
         fail: Too much data, please check if the input is correct.
 
+  toolshed.g2.bx.psu.edu/repos/devteam/freebayes/freebayes/.*:
+    # see https://github.com/usegalaxy-eu/infrastructure-playbook/pull/881 for some numbers
+    cores: 10
+    mem: 9 + input_size * 1
+
   toolshed.g2.bx.psu.edu/repos/iuc/shovill/shovill/.*:
     inherits: toolshed.g2.bx.psu.edu/repos/nml/spades/spades/.*