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Thanks for the tool. I am running gimmemotif scan. I would like to know how the 'score' is calculated?
At first I thought each motif has a score. I looked at specific motif_ids and in the following ss, we have three different motifs (summation of motifs in factors_direct and factors_indirect) and four scores.
In here, we have one motif TF in the factors_indirect but we have two scores associated with it. How should we interpret the results?
Thanks!
The text was updated successfully, but these errors were encountered:
Hello dev team,
Thanks for the tool. I am running gimmemotif scan. I would like to know how the 'score' is calculated?
![Screenshot 2024-05-02 at 1 22 11 PM](https://private-user-images.githubusercontent.com/83424513/327581765-78555a30-0d35-4bf7-a7eb-1a0646c3a8a2.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.npbVg4mTRDHLFKkhw-zs3XMDQz5Pl6vhPOAf6bnzc7o)
At first I thought each motif has a score. I looked at specific motif_ids and in the following ss, we have three different motifs (summation of motifs in factors_direct and factors_indirect) and four scores.
In here, we have one motif TF in the factors_indirect but we have two scores associated with it. How should we interpret the results?
![Screenshot 2024-05-02 at 1 40 43 PM](https://private-user-images.githubusercontent.com/83424513/327582365-1517f926-9b6a-4fd5-a8fb-6022885bd3e5.png?jwt=eyJhbGciOiJIUzI1NiIsInR5cCI6IkpXVCJ9.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.ralGyzCLeqyCxb0I6Q_c7QAWw4rSkjj95rQ8tyxlVJ8)
Thanks!
The text was updated successfully, but these errors were encountered: