fix: try with no single string in command rscript

workflow4metabolomics · Nov 14, 2024 · 16ec8dd · 16ec8dd
1 parent 5274459
commit 16ec8dd
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/tools/metams/metams_plot.xml b/tools/metams/metams_plot.xml
@@ -15,7 +15,7 @@
     </required_files>
 
     <command detect_errors="exit_code"><![CDATA[
-    '@COMMAND_RSCRIPT@/metams_plot.r'
+    @COMMAND_RSCRIPT@/metams_plot.r
         
         metaMS '$metaMS'
 

diff --git a/tools/metams/metams_run_gc.xml b/tools/metams/metams_run_gc.xml
@@ -13,7 +13,7 @@
     </required_files>
 
     <command detect_errors="exit_code"><![CDATA[
-    '@COMMAND_RSCRIPT@//metams_run_gc.r'
+    @COMMAND_RSCRIPT@/metams_run_gc.r
 
         singlefile_galaxyPath '$input' 
         singlefile_sampleName '$input.name'