From 06130b39c35e6e748b1763d52715bfe6fec5e628 Mon Sep 17 00:00:00 2001 From: zhanghao-njmu <542370159@qq.com> Date: Mon, 20 Nov 2023 22:39:08 +0800 Subject: [PATCH] Increment version number to 0.5.6 --- DESCRIPTION | 2 +- R/SCP-plot.R | 2 +- man/CellDimPlot.Rd | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index d22293d1..d15dd0d5 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: SCP Type: Package Title: Single Cell Pipeline -Version: 0.5.5 +Version: 0.5.6 Author: Hao Zhang Maintainer: Hao Zhang Description: An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data. diff --git a/R/SCP-plot.R b/R/SCP-plot.R index a0737706..ad4a980f 100644 --- a/R/SCP-plot.R +++ b/R/SCP-plot.R @@ -1332,7 +1332,7 @@ CellDimPlot <- function(srt, group.by, reduction = NULL, dims = c(1, 2), split.b label_point_size = 1, label_point_color = "black", label_segment_color = "black", cells.highlight = NULL, cols.highlight = "black", sizes.highlight = 1, alpha.highlight = 1, stroke.highlight = 0.5, add_density = FALSE, density_color = "grey80", density_filled = FALSE, density_filled_palette = "Greys", density_filled_palcolor = NULL, - add_mark = FALSE, mark_type = c("hull", "ellipse", "rect", "circle"), mark_expand = unit(3, "mm"), mark_alpha = 0.1, mark_linetype = 1, + add_mark = FALSE, mark_type = c("hull", "ellipse", "rect", "circle"), mark_expand = grid::unit(3, "mm"), mark_alpha = 0.1, mark_linetype = 1, lineages = NULL, lineages_trim = c(0.01, 0.99), lineages_span = 0.75, lineages_palette = "Dark2", lineages_palcolor = NULL, lineages_arrow = arrow(length = unit(0.1, "inches")), lineages_linewidth = 1, lineages_line_bg = "white", lineages_line_bg_stroke = 0.5, diff --git a/man/CellDimPlot.Rd b/man/CellDimPlot.Rd index 341b7640..f3aa3e8c 100644 --- a/man/CellDimPlot.Rd +++ b/man/CellDimPlot.Rd @@ -41,7 +41,7 @@ CellDimPlot( density_filled_palcolor = NULL, add_mark = FALSE, mark_type = c("hull", "ellipse", "rect", "circle"), - mark_expand = unit(3, "mm"), + mark_expand = grid::unit(3, "mm"), mark_alpha = 0.1, mark_linetype = 1, lineages = NULL,