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deeperbin-conda-env.yml
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name: deeperbin
channels:
- anaconda
- conda-forge
- bioconda
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_gnu
- _tflow_select=2.3.0=mkl
- abseil-cpp=20211102.0=h93e1e8c_3
- absl-py=2.1.0=pyhd8ed1ab_0
- aiohappyeyeballs=2.4.4=pyhd8ed1ab_1
- aiohttp=3.11.9=py39h9399b63_0
- aiosignal=1.3.1=pyhd8ed1ab_1
- astunparse=1.6.3=pyhd8ed1ab_2
- async-timeout=5.0.1=pyhd8ed1ab_1
- attrs=24.2.0=pyh71513ae_0
- blinker=1.9.0=pyhff2d567_0
- boost-cpp=1.70.0=ha2d47e9_1
- brotli-python=1.1.0=py39hf88036b_2
- bzip2=1.0.8=h4bc722e_7
- c-ares=1.34.3=hb9d3cd8_1
- ca-certificates=2024.12.14=hbcca054_0
- cached-property=1.5.2=hd8ed1ab_1
- cached_property=1.5.2=pyha770c72_1
- cachetools=5.5.0=pyhd8ed1ab_0
- certifi=2024.12.14=pyhd8ed1ab_0
- cffi=1.17.1=py39h15c3d72_0
- charset-normalizer=3.4.0=pyhd8ed1ab_1
- click=8.1.7=unix_pyh707e725_1
- colorama=0.4.6=pyhd8ed1ab_1
- cryptography=39.0.0=py39hd598818_0
- cudatoolkit=11.8.0=h4ba93d1_13
- dashing=0.4.0=h735f0e5_3
- diamond=2.0.4=h56fc30b_0
- fastani=1.34=h4dfc31f_3
- flatbuffers=24.3.25=h59595ed_0
- frozenlist=1.5.0=py39h8cd3c5a_0
- galah=0.4.1=h031d066_0
- gast=0.4.0=pyh9f0ad1d_0
- giflib=5.2.2=hd590300_0
- google-auth=2.36.0=pyhff2d567_0
- google-auth-oauthlib=1.0.0=pyhd8ed1ab_1
- google-pasta=0.2.0=pyhd8ed1ab_1
- grpc-cpp=1.48.2=h5bf31a4_0
- grpcio=1.48.2=py39h5bf31a4_0
- gsl=2.7=he838d99_0
- h2=4.1.0=pyhd8ed1ab_1
- h5py=3.9.0=nompi_py39h4dfffb9_100
- hdf5=1.14.0=nompi_h5231ba7_103
- hmmer=3.1b2=3
- hpack=4.0.0=pyhd8ed1ab_1
- hyperframe=6.0.1=pyhd8ed1ab_1
- icu=58.2=hf484d3e_1000
- idna=3.10=pyhd8ed1ab_1
- importlib-metadata=8.5.0=pyha770c72_1
- joblib=1.4.2=pyhd8ed1ab_0
- jpeg=9e=h0b41bf4_3
- keras=2.12.0=pyhd8ed1ab_0
- kernel-headers_linux-64=3.10.0=he073ed8_18
- keyutils=1.6.1=h166bdaf_0
- krb5=1.20.1=hf9c8cef_0
- ld_impl_linux-64=2.40=hf3520f5_7
- libabseil=20211102.0=cxx17_h48a1fff_3
- libaec=1.1.3=h59595ed_0
- libblas=3.9.0=20_linux64_openblas
- libcblas=3.9.0=20_linux64_openblas
- libcurl=8.2.1=h91b91d3_0
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=hd590300_2
- libexpat=2.6.2=h59595ed_0
- libffi=3.4.2=h7f98852_5
- libgcc=14.1.0=h77fa898_1
- libgcc-ng=14.1.0=h69a702a_1
- libgfortran=14.1.0=h69a702a_1
- libgfortran-ng=14.1.0=h69a702a_1
- libgfortran5=14.1.0=hc5f4f2c_1
- libgomp=14.1.0=h77fa898_1
- liblapack=3.9.0=20_linux64_openblas
- liblightgbm=4.5.0=cuda_h1f3617d_3
- liblzma=5.6.3=hb9d3cd8_1
- liblzma-devel=5.6.3=hb9d3cd8_1
- libnghttp2=1.52.0=ha637b67_1
- libnsl=2.0.1=hd590300_0
- libopenblas=0.3.25=pthreads_h413a1c8_0
- libpng=1.6.43=h2797004_0
- libprotobuf=3.20.3=h3eb15da_0
- libsqlite=3.45.2=h2797004_0
- libssh2=1.10.0=haa6b8db_3
- libstdcxx=14.1.0=hc0a3c3a_1
- libstdcxx-ng=14.1.0=h4852527_1
- libuuid=2.38.1=h0b41bf4_0
- libxcrypt=4.4.36=hd590300_1
- libzlib=1.2.13=h4ab18f5_6
- lightgbm=4.5.0=cuda_py_3
- lz4-c=1.9.3=h9c3ff4c_1
- markdown=3.6=pyhd8ed1ab_0
- markupsafe=3.0.2=py39h9399b63_1
- multidict=6.1.0=py39h9399b63_1
- ncurses=6.4=h6a678d5_0
- numpy=1.23.5=py39h3d75532_0
- oauthlib=3.2.2=pyhd8ed1ab_0
- openssl=1.1.1w=hd590300_0
- opt_einsum=3.4.0=pyhd8ed1ab_0
- packaging=24.2=pyhd8ed1ab_2
- pandas=1.4.0=py39hde0f152_0
- pip=24.2=pyhd8ed1ab_0
- prodigal=2.6.3=h031d066_9
- propcache=0.2.1=py39h8cd3c5a_0
- protobuf=3.20.3=py39h227be39_1
- pyasn1=0.6.1=pyhd8ed1ab_2
- pyasn1-modules=0.4.1=pyhd8ed1ab_1
- pycparser=2.22=pyh29332c3_1
- pyjwt=2.10.1=pyhd8ed1ab_0
- pyopenssl=23.2.0=pyhd8ed1ab_1
- pysocks=1.7.1=pyha55dd90_7
- python=3.9.15=h47a2c10_0_cpython
- python-dateutil=2.9.0.post0=pyhff2d567_1
- python-flatbuffers=24.3.25=pyh59ac667_0
- python_abi=3.9=5_cp39
- pytz=2024.2=pyhd8ed1ab_1
- pyu2f=0.1.5=pyhd8ed1ab_0
- re2=2022.04.01=h27087fc_0
- readline=8.2=h8228510_1
- requests=2.32.3=pyhd8ed1ab_1
- requests-oauthlib=2.0.0=pyhd8ed1ab_0
- rsa=4.9=pyhd8ed1ab_0
- scikit-learn=0.23.2=py39hf3c863f_3
- scipy=1.8.0=py39hee8e79c_1
- setuptools=72.1.0=pyhd8ed1ab_0
- six=1.17.0=pyhd8ed1ab_0
- snappy=1.2.1=h8bd8927_1
- sqlite=3.45.2=h2c6b66d_0
- sysroot_linux-64=2.17=h4a8ded7_18
- tensorboard=2.12.3=pyhd8ed1ab_0
- tensorboard-data-server=0.7.0=py39h52d8a92_1
- tensorflow=2.12.0=mkl_py39h5ea9445_0
- tensorflow-base=2.12.0=mkl_py39he5f8e37_0
- tensorflow-estimator=2.12.0=py39h06a4308_0
- termcolor=2.5.0=pyhd8ed1ab_0
- threadpoolctl=3.5.0=pyhc1e730c_0
- tk=8.6.13=noxft_h4845f30_101
- tqdm=4.67.1=pyhd8ed1ab_0
- typing-extensions=4.12.2=hd8ed1ab_1
- typing_extensions=4.12.2=pyha770c72_1
- tzdata=2024a=h0c530f3_0
- urllib3=2.2.3=pyhd8ed1ab_1
- werkzeug=3.1.3=pyhd8ed1ab_1
- wheel=0.44.0=pyhd8ed1ab_0
- wrapt=1.17.0=py39h8cd3c5a_0
- xz
- xz-gpl-tools
- xz-tools
- yarl=1.18.3=py39h8cd3c5a_0
- zipp=3.21.0=pyhd8ed1ab_1
- zlib=1.2.13=h4ab18f5_6
- zstandard=0.19.0=py39hb9d737c_0
- zstd=1.4.9=ha95c52a_0
- pip:
- contourpy==1.3.0
- cycler==0.12.1
- dendropy==5.0.1
- filelock==3.13.1
- flspp-modified==1.3
- fonttools==4.55.3
- fsspec==2024.2.0
- hnswlib==0.8.0
- igraph==0.11.8
- checkm2-modified==1.0.2
- importlib-resources==6.4.5
- jinja2==3.1.3
- kiwisolver==1.4.7
- checkm-genome==1.2.3
- leidenalg==0.10.2
- matplotlib==3.9.4
- mpmath==1.3.0
- networkx==3.2.1
- pillow==10.2.0
- psutil==6.1.0
- pyparsing==3.2.0
- pysam==0.22.1
- sympy==1.13.1
- texttable==1.7.0