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notebooks
notebooks
 
 
src
src
 
 
.env.example
.env.example
 
 
.gitignore
.gitignore
 
 
ARCHS4_TFs_Coexp_lncRNA.txt
ARCHS4_TFs_Coexp_lncRNA.txt
 
 
Achilles_fitness_decrease_lncRNA.txt
Achilles_fitness_decrease_lncRNA.txt
 
 
Achilles_fitness_increase_lncRNA.txt
Achilles_fitness_increase_lncRNA.txt
 
 
CCLE_Proteomics_2020_lncRNA.txt
CCLE_Proteomics_2020_lncRNA.txt
 
 
ChEA_2022_lncRNA.txt
ChEA_2022_lncRNA.txt
 
 
Descartes_Cell_Types_and_Tissue_2021_lncRNA.txt
Descartes_Cell_Types_and_Tissue_2021_lncRNA.txt
 
 
DisGeNET_lncRNA.txt
DisGeNET_lncRNA.txt
 
 
FANTOM6_lncRNA_KD_DEGs_lncRNA.txt
FANTOM6_lncRNA_KD_DEGs_lncRNA.txt
 
 
GO_Biological_Process_2021_lncRNA.txt
GO_Biological_Process_2021_lncRNA.txt
 
 
GWAS_Catalog_2019_lncRNA.txt
GWAS_Catalog_2019_lncRNA.txt
 
 
Help.md
Help.md
 
 
HuBMAP_ASCTplusB_augmented_2022_lncRNA.txt
HuBMAP_ASCTplusB_augmented_2022_lncRNA.txt
 
 
Human_Gene_Atlas_lncRNA.txt
Human_Gene_Atlas_lncRNA.txt
 
 
Human_Phenotype_Ontology_lncRNA.txt
Human_Phenotype_Ontology_lncRNA.txt
 
 
Jensen_DISEASES_lncRNA.txt
Jensen_DISEASES_lncRNA.txt
 
 
KEGG_2021_Human_lncRNA.txt
KEGG_2021_Human_lncRNA.txt
 
 
Library.md
Library.md
 
 
MGI_Mammalian_Phenotype_Level_4_2021_lncRNA.txt
MGI_Mammalian_Phenotype_Level_4_2021_lncRNA.txt
 
 
PFOCR_Pathways_lncRNA.txt
PFOCR_Pathways_lncRNA.txt
 
 
Pfam_InterPro_Domains_lncRNA.txt
Pfam_InterPro_Domains_lncRNA.txt
 
 
Proteomics_Drug_Atlas_2023_lncRNA.txt
Proteomics_Drug_Atlas_2023_lncRNA.txt
 
 
README.md
README.md
 
 
Reactome_2022_lncRNA.txt
Reactome_2022_lncRNA.txt
 
 
TRRUST_Transcription_Factors_2019_lncRNA.txt
TRRUST_Transcription_Factors_2019_lncRNA.txt
 
 
Tabula_Muris_lncRNA.txt
Tabula_Muris_lncRNA.txt
 
 
Tabula_Sapiens_lncRNA.txt
Tabula_Sapiens_lncRNA.txt
 
 
The_Kinase_Library_2023_lncRNA.txt
The_Kinase_Library_2023_lncRNA.txt
 
 
WikiPathway_2021_Human_lncRNA.txt
WikiPathway_2021_Human_lncRNA.txt
 
 
docker-compose.yml
docker-compose.yml
 
 
logo-new.png
logo-new.png
 
 
logo-new1.png
logo-new1.png
 
 
logo-new2.png
logo-new2.png
 
 
requirements.txt
requirements.txt
 
 
schema.json
schema.json
 
 

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Knowledge Graph Demo

Running Neo4j on docker

cp .env.example .env
docker-compose up kg

open http://localhost:7474

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  • Jupyter Notebook 96.0%
  • Python 4.0%