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Doc: Update installation under conda #2474

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24 changes: 15 additions & 9 deletions documentation/python_installation.rst
Original file line number Diff line number Diff line change
Expand Up @@ -360,16 +360,19 @@ environment variables:
| | Default: ``ON`` | |
+----------------------------+----------------------------------+---------------------------------+

Installation under Anaconda
---------------------------
Installation under conda
------------------------

To use an Anaconda installation of Python
`https://www.anaconda.com/distribution/ <https://www.anaconda.com/distribution/>`_,
Python>=3.7), proceed as follows:
There is no amici conda recipe available yet. However, you can install AMICI
using pip in a conda environment.

Since Anaconda provides own versions of some packages which might not
work with AMICI (in particular the ``gcc`` compiler), create a minimal
virtual environment via:
.. note::

It is possible, but we currently don't recommend using conda for installing
AMICI, as it commonly leads to conflicts with system installations of
libraries and compilers.

Create a minimal conda environment via:

.. code-block:: bash

Expand Down Expand Up @@ -415,7 +418,7 @@ Now, you are ready to use AMICI in the virtual environment.

.. note::

**Anaconda on Mac**
**conda on Mac**

If the above installation does not work for you, try installing AMICI via:

Expand All @@ -437,6 +440,9 @@ Now, you are ready to use AMICI in the virtual environment.

(For further discussion see https://github.com/AMICI-dev/AMICI/issues/357)

Known issues:

* ``CMAKE_AR-NOTFOUND: not found``: Try ``conda install binutils``.

Optional Boost support
----------------------
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