Update CI to ubuntu-24.04 #2964

Workflow file for this run

	name: PeleC-CI

	on:
	workflow_dispatch:
	push:
	branches: [development]
	pull_request:
	branches: [development]

	concurrency:
	group: ${{github.ref}}-${{github.head_ref}}-ci
	cancel-in-progress: true

	jobs:
	Formatting:
	runs-on: ubuntu-24.04
	steps:
	- name: Clone
	uses: actions/checkout@v4
	- name: Check formatting
	uses: DoozyX/[email protected]
	with:
	source: './Source ./Exec'
	exclude: '.'
	extensions: 'H,h,cpp'
	clangFormatVersion: 18
	CPU-GNUmake:
	needs: Formatting
	runs-on: ubuntu-24.04
	steps:
	- name: Clone
	uses: actions/checkout@v4
	with:
	submodules: 'recursive'
	- name: Setup
	working-directory: ./Exec/RegTests/PMF
	run: \|
	echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	echo "CCACHE_COMPRESSLEVEL=1" >> $GITHUB_ENV
	echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	echo "CCACHE_MAXSIZE=350M" >> $GITHUB_ENV
	make COMP=gnu USE_MPI=FALSE DEBUG=TRUE TPL
	make COMP=llvm USE_MPI=FALSE DEBUG=TRUE PRECISION=FLOAT TPL
	- name: Install Ccache
	run: \|
	wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	tar xvf ccache-4.8-linux-x86_64.tar.xz
	sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	- name: Set Up Ccache
	uses: actions/cache@v4
	with:
	path: ~/.cache/ccache
	key: ccache-${{github.workflow}}-${{github.job}}-git-${{github.sha}}
	restore-keys: \|
	ccache-${{github.workflow}}-${{github.job}}-git-
	- name: PMF debug make
	working-directory: ./Exec/RegTests/PMF
	run: \|
	echo "::add-matcher::.github/problem-matchers/gcc.json"
	set -eu -o pipefail
	ccache -z
	make -j ${{env.NPROCS}} KEEP_BUILDINFO_CPP=TRUE USE_CCACHE=TRUE COMP=gnu USE_MPI=FALSE DEBUG=TRUE 2>&1 \| tee -a build-output.txt
	- name: PMF ccache report
	working-directory: ./Exec/RegTests/PMF
	run: \|
	ccache -s
	du -hs ~/.cache/ccache
	- name: PMF debug test
	working-directory: ./Exec/RegTests/PMF
	run: ./PeleC3d.gnu.DEBUG.ex pmf-lidryer-arkode.inp max_step=2 amr.plot_files_output=0 amr.checkpoint_files_output=0
	- name: PMF debug report
	working-directory: ./Exec/RegTests/PMF
	run: \|
	egrep "Warning:\|Error:\|warning:\|error:" build-output.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|GNUmakefile\|ThirdParty" \
	\| egrep -v "ld: warning:" \| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > warnings.txt
	cat warnings.txt
	export return=$(tail -n 1 warnings.txt \| awk '{print $2}')
	exit ${return}
	- name: EB debug build
	working-directory: ./Exec/RegTests/EB-C10
	run: \|
	echo "::add-matcher::.github/problem-matchers/gcc.json"
	set -eu -o pipefail
	ccache -z
	make -j ${{env.NPROCS}} KEEP_BUILDINFO_CPP=TRUE USE_CCACHE=TRUE COMP=gnu USE_MPI=FALSE DEBUG=TRUE 2>&1 \| tee -a build-output.txt
	- name: EB debug ccache report
	working-directory: ./Exec/RegTests/EB-C10
	run: \|
	ccache -s
	du -hs ~/.cache/ccache
	- name: EB debug test
	working-directory: ./Exec/RegTests/EB-C10
	run: ./PeleC3d.gnu.DEBUG.ex eb-c10.inp max_step=2 amr.plot_files_output=0 amr.checkpoint_files_output=0
	- name: EB debug report
	working-directory: ./Exec/RegTests/EB-C10
	run: \|
	egrep "Warning:\|Error:\|warning:\|error:" build-output.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|GNUmakefile\|ThirdParty" \
	\| egrep -v "ld: warning:" \| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > warnings.txt
	cat warnings.txt
	export return=$(tail -n 1 warnings.txt \| awk '{print $2}')
	exit ${return}
	- name: EB OMP debug build
	working-directory: ./Exec/RegTests/EB-C10
	run: \|
	echo "::add-matcher::.github/problem-matchers/gcc.json"
	set -eu -o pipefail
	ccache -z
	make -j ${{env.NPROCS}} KEEP_BUILDINFO_CPP=TRUE USE_CCACHE=TRUE COMP=gnu USE_MPI=FALSE DEBUG=TRUE USE_OMP=TRUE 2>&1 \| tee -a build-output.txt
	- name: EB OMP debug ccache report
	working-directory: ./Exec/RegTests/EB-C10
	run: \|
	ccache -s
	du -hs ~/.cache/ccache
	- name: EB OMP debug test
	working-directory: ./Exec/RegTests/EB-C10
	run: ./PeleC3d.gnu.DEBUG.OMP.ex eb-c10.inp max_step=2 amr.plot_files_output=0 amr.checkpoint_files_output=0
	- name: EB OMP debug report
	working-directory: ./Exec/RegTests/EB-C10
	run: \|
	egrep "Warning:\|Error:\|warning:\|error:" build-output.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|GNUmakefile\|ThirdParty" \
	\| egrep -v "ld: warning:" \| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > warnings.txt
	cat warnings.txt
	export return=$(tail -n 1 warnings.txt \| awk '{print $2}')
	exit ${return}
	- name: TG debug single precision build
	working-directory: ./Exec/RegTests/TG
	run: \|
	echo "::add-matcher::.github/problem-matchers/gcc.json"
	set -eu -o pipefail
	ccache -z
	make -j ${{env.NPROCS}} KEEP_BUILDINFO_CPP=TRUE USE_CCACHE=TRUE COMP=llvm USE_MPI=FALSE DEBUG=TRUE PRECISION=FLOAT 2>&1 \| tee -a build-output.txt
	- name: TG debug single precision ccache report
	working-directory: ./Exec/RegTests/TG
	run: \|
	ccache -s
	du -hs ~/.cache/ccache
	- name: TG debug single precision test
	working-directory: ./Exec/RegTests/TG
	run: ./PeleC3d.llvm.FLOAT.DEBUG.ex tg-2.inp max_step=2 amr.plot_files_output=0 amr.checkpoint_files_output=0
	- name: TG debug single precision report
	working-directory: ./Exec/RegTests/TG
	run: \|
	egrep "Warning:\|Error:\|warning:\|error:" build-output.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|GNUmakefile\|ThirdParty" \
	\| egrep -v "ld: warning:" \| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > warnings.txt
	cat warnings.txt
	export return=$(tail -n 1 warnings.txt \| awk '{print $2}')
	exit ${return}
	- name: Soot debug build
	working-directory: ./Exec/RegTests/Soot-Flame
	run: \|
	echo "::add-matcher::.github/problem-matchers/gcc.json"
	set -eu -o pipefail
	ccache -z
	make -j ${{env.NPROCS}} KEEP_BUILDINFO_CPP=TRUE USE_CCACHE=TRUE COMP=gnu USE_MPI=FALSE DEBUG=TRUE 2>&1 \| tee -a build-output.txt
	- name: Soot debug ccache report
	working-directory: ./Exec/RegTests/Soot-Flame
	run: \|
	ccache -s
	du -hs ~/.cache/ccache
	- name: Soot debug report
	working-directory: ./Exec/RegTests/Soot-Flame
	run: \|
	egrep "Warning:\|Error:\|warning:\|error:" build-output.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|GNUmakefile\|ThirdParty" \
	\| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > warnings.txt
	cat warnings.txt
	export return=$(tail -n 1 warnings.txt \| awk '{print $2}')
	exit ${return}
	- name: Spray debug build
	working-directory: ./Exec/RegTests/Spray-Conv
	run: \|
	echo "::add-matcher::.github/problem-matchers/gcc.json"
	set -eu -o pipefail
	ccache -z
	make -j ${{env.NPROCS}} KEEP_BUILDINFO_CPP=TRUE USE_CCACHE=TRUE COMP=gnu USE_MPI=FALSE DEBUG=TRUE 2>&1 \| tee -a build-output.txt
	- name: Spray debug ccache report
	working-directory: ./Exec/RegTests/Soot-Flame
	run: \|
	ccache -s
	du -hs ~/.cache/ccache
	- name: Spray debug report
	working-directory: ./Exec/RegTests/Spray-Conv
	run: \|
	egrep "Warning:\|Error:\|warning:\|error:" build-output.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials\|GNUmakefile\|ThirdParty" \
	\| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > warnings.txt
	cat warnings.txt
	export return=$(tail -n 1 warnings.txt \| awk '{print $2}')
	exit ${return}
	CPU-CMake:
	needs: Formatting
	runs-on: ${{matrix.os}}
	strategy:
	matrix:
	os: [ubuntu-24.04, macos-latest]
	build_type: [Release, Debug]
	include:
	- os: macos-latest
	install_deps: brew install mpich libtool automake ccache
	comp: llvm
	procs: $(sysctl -n hw.ncpu)
	ccache_cache: /Users/runner/Library/Caches/ccache
	- os: ubuntu-24.04
	install_deps: sudo apt-get update && sudo apt-get install mpich libmpich-dev libtool-bin
	comp: gnu
	procs: $(nproc)
	ccache_cache: ~/.cache/ccache
	- build_type: Release
	ctest_args: -LE no-ci
	ccache_size: 150M
	- build_type: Debug
	ctest_args: -R eb-c12
	ccache_size: 500M
	exclude:
	- os: macos-latest
	build_type: Debug
	steps:
	- name: Clone
	uses: actions/checkout@v4
	with:
	submodules: 'recursive'
	- name: Python
	uses: actions/setup-python@v5
	with:
	python-version: '3.10'
	- name: Setup
	run: \|
	echo "NPROCS=${{matrix.procs}}" >> $GITHUB_ENV
	echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	echo "CCACHE_COMPRESSLEVEL=1" >> $GITHUB_ENV
	echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	echo "CCACHE_MAXSIZE=${{matrix.ccache_size}}" >> $GITHUB_ENV
	cmake -E make_directory ${{runner.workspace}}/deps
	if [ "${RUNNER_OS}" != "macOS" ]; then
	${{github.workspace}}/Submodules/PelePhysics/Submodules/amrex/.github/workflows/dependencies/ubuntu_free_disk_space.sh
	fi
	- name: Dependencies
	run: \|
	# Install MPI
	${{matrix.install_deps}}
	# Install Python packages
	python -m pip install --upgrade pip
	pip install pynose numpy pandas setuptools
	- name: Install Ccache
	run: \|
	if [ "${RUNNER_OS}" != "macOS" ]; then
	wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	tar xvf ccache-4.8-linux-x86_64.tar.xz
	sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	fi
	- name: Set Up Ccache
	uses: actions/cache@v4
	with:
	path: ${{matrix.ccache_cache}}
	key: ccache-${{github.workflow}}-${{github.job}}-${{matrix.os}}-${{matrix.build_type}}-git-${{github.sha}}
	restore-keys: \|
	ccache-${{github.workflow}}-${{github.job}}-${{matrix.os}}-${{matrix.build_type}}-git-
	- name: MASA
	run: \|
	# Install MetaPhysicL
	cd ${{runner.workspace}}/deps
	git clone --recursive https://github.com/roystgnr/MetaPhysicL.git ${{runner.workspace}}/deps/MetaPhysicL
	cd ${{runner.workspace}}/deps/MetaPhysicL
	./bootstrap
	./configure --prefix="${{runner.workspace}}/deps/install/MetaPhysicL"
	make -j ${{env.NPROCS}}
	make install
	# Install MASA
	cd ${{runner.workspace}}/deps
	git clone --recursive https://github.com/manufactured-solutions/MASA.git ${{runner.workspace}}/deps/MASA
	cd ${{runner.workspace}}/deps/MASA
	./bootstrap
	./configure CXX='mpicxx -std=c++11' CC=mpicc \
	METAPHYSICL_DIR="${{runner.workspace}}/deps/install/MetaPhysicL" \
	--prefix="${{runner.workspace}}/deps/install/MASA"
	make -j ${{env.NPROCS}}
	make install
	- name: Configure
	run: \|
	(for DIM in 2 3; do \
	printf "\n-------- Configuring ${DIM}D --------\n"; \
	cmake -B${{runner.workspace}}/build-${DIM}d-${{matrix.os}}-${{matrix.build_type}} \
	-DCMAKE_INSTALL_PREFIX:PATH=${{runner.workspace}}/install-${DIM}d-${{matrix.os}}-${{matrix.build_type}} \
	-DCMAKE_BUILD_TYPE:STRING=${{matrix.build_type}} \
	-DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
	-DPELE_DIM:STRING=${DIM} \
	-DPELE_ENABLE_MPI:BOOL=ON \
	-DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	-DPELE_ENABLE_MASA:BOOL=ON \
	-DPELE_EXCLUDE_BUILD_IN_CI:BOOL=ON \
	-DMASA_ROOT:PATH=${{runner.workspace}}/deps/install/MASA \
	-DCMAKE_CXX_COMPILER_LAUNCHER:STRING=ccache \
	${{github.workspace}}; \
	if [ $? -ne 0 ]; then exit 1; fi \
	done)
	- name: Build
	run: \|
	ccache -z
	(for DIM in 2 3; do \
	printf "\n-------- Building ${DIM}D --------\n"; \
	cmake --build ${{runner.workspace}}/build-${DIM}d-${{matrix.os}}-${{matrix.build_type}} \
	--parallel ${{env.NPROCS}} 2>&1 \| tee -a ${{runner.workspace}}/build-output.txt; \
	if [ ${PIPESTATUS[0]} -ne 0 ]; then exit 1; fi \
	done)
	- name: Ccache Report
	run: \|
	ccache -s
	du -hs ${{matrix.ccache_cache}}
	- name: Report
	run: \|
	echo "::add-matcher::.github/problem-matchers/gcc.json"
	egrep "Warning:\|Error:\|warning:\|error:" ${{runner.workspace}}/build-output.txt \
	\| egrep -v "Submodules/amrex\|Submodules/sundials" \
	\| egrep -v "ld: warning:" \| egrep -v "lto-wrapper: warning:" \| sort \| uniq \
	\| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > ${{runner.workspace}}/build-output-warnings.txt
	cat ${{runner.workspace}}/build-output-warnings.txt
	export return=$(tail -n 1 ${{runner.workspace}}/build-output-warnings.txt \| awk '{print $2}')
	exit ${return}
	- name: Test
	run: \|
	(for DIM in 2 3; do \
	printf "\n-------- Testing ${DIM}D --------\n"; \
	cd ${{runner.workspace}}/build-${DIM}d-${{matrix.os}}-${{matrix.build_type}}; \
	ctest ${{matrix.ctest_args}} -VV --output-on-failure; \
	if [ $? -ne 0 ]; then exit 1; fi \
	done)
	# GPU-Nvidia:
	# name: GPU-CUDA
	# needs: [Formatting, CPU-GNUmake]
	# runs-on: ubuntu-24.04
	# steps:
	# - name: Clone
	# uses: actions/checkout@v4
	# with:
	# submodules: 'recursive'
	# - name: Setup
	# run: \|
	# echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESSLEVEL=1" >> $GITHUB_ENV
	# echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	# echo "CCACHE_MAXSIZE=500M" >> $GITHUB_ENV
	# - name: Dependencies
	# run: \|
	# ${{github.workspace}}/Submodules/PelePhysics/Submodules/amrex/.github/workflows/dependencies/ubuntu_free_disk_space.sh
	# wget https://developer.download.nvidia.com/compute/cuda/repos/ubuntu2404/x86_64/cuda-keyring_1.1-1_all.deb
	# sudo dpkg -i cuda-keyring_1.1-1_all.deb
	# sudo apt-get update
	# sudo apt-get install -y cuda-command-line-tools-12-6 \
	# cuda-compiler-12-6 cuda-minimal-build-12-6 \
	# cuda-nvml-dev-12-6 cuda-nvtx-12-6 \
	# libcurand-dev-12-6 cuda-cupti-dev-12-6 \
	# libcusolver-dev-12-6 libcusparse-dev-12-6 \
	# libcublas-dev-12-6 libcurand-dev-12-6 libnvjitlink-12-6
	# - name: Install Ccache
	# run: \|
	# wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	# tar xvf ccache-4.8-linux-x86_64.tar.xz
	# sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	# - name: Set Up Ccache
	# uses: actions/cache@v4
	# with:
	# path: ~/.cache/ccache
	# key: ccache-${{github.workflow}}-${{github.job}}-git-${{github.sha}}
	# restore-keys: \|
	# ccache-${{github.workflow}}-${{github.job}}-git-
	# - name: Configure
	# run: \|
	# export PATH=/usr/local/nvidia/bin:/usr/local/cuda-12.6/bin:${PATH}
	# export LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64:/usr/local/cuda-12.6/lib:${LD_LIBRARY_PATH}
	# cmake -Bbuild-cuda \
	# -DCMAKE_BUILD_TYPE:STRING=Release \
	# -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
	# -DPELE_ENABLE_MPI:BOOL=OFF \
	# -DPELE_ENABLE_CUDA:BOOL=ON \
	# -DPELE_EXCLUDE_BUILD_IN_CI:BOOL=ON \
	# -DAMReX_CUDA_ERROR_CAPTURE_THIS:BOOL=ON \
	# -DCMAKE_CUDA_ARCHITECTURES:STRING=80 \
	# -DCMAKE_CUDA_COMPILER_LAUNCHER:STRING=ccache \
	# -DCMAKE_CXX_COMPILER_LAUNCHER:STRING=ccache \
	# ${{github.workspace}}
	# - name: Build
	# run: \|
	# ccache -z
	# cmake --build build-cuda --parallel ${{env.NPROCS}}
	# - name: Ccache Report
	# run: \|
	# ccache -s
	# du -hs ~/.cache/ccache
	# GPU-AMD:
	# name: GPU-HIP
	# needs: [Formatting, CPU-GNUmake]
	# runs-on: ubuntu-22.04
	# steps:
	# - name: Clone
	# uses: actions/checkout@v4
	# with:
	# submodules: 'recursive'
	# - name: Setup
	# run: \|
	# echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESSLEVEL=1" >> $GITHUB_ENV
	# echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	# echo "CCACHE_MAXSIZE=100M" >> $GITHUB_ENV
	# - name: Dependencies
	# run: \|
	# ${{github.workspace}}/Submodules/PelePhysics/Submodules/amrex/.github/workflows/dependencies/ubuntu_free_disk_space.sh
	# sudo mkdir --parents --mode=0755 /etc/apt/keyrings
	# wget https://repo.radeon.com/rocm/rocm.gpg.key -O - \| gpg --dearmor \| sudo tee /etc/apt/keyrings/rocm.gpg > /dev/null
	# echo "deb [arch=amd64 signed-by=/etc/apt/keyrings/rocm.gpg] https://repo.radeon.com/rocm/apt/6.2.4 jammy main" \| sudo tee --append /etc/apt/sources.list.d/rocm.list
	# echo -e 'Package: *\nPin: release o=repo.radeon.com\nPin-Priority: 600' \| sudo tee /etc/apt/preferences.d/rocm-pin-600
	# echo 'export PATH=/opt/rocm/llvm/bin:/opt/rocm/bin:/opt/rocm/profiler/bin:/opt/rocm/opencl/bin:$PATH' \| sudo tee -a /etc/profile.d/rocm.sh
	# sudo apt-get update
	# sudo apt-get install -y rocm-dev rocrand-dev rocprim-dev hiprand-dev
	# - name: Install Ccache
	# run: \|
	# wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	# tar xvf ccache-4.8-linux-x86_64.tar.xz
	# sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	# - name: Set Up Ccache
	# uses: actions/cache@v4
	# with:
	# path: ~/.cache/ccache
	# key: ccache-${{github.workflow}}-${{github.job}}-git-${{github.sha}}
	# restore-keys: \|
	# ccache-${{github.workflow}}-${{github.job}}-git-
	# - name: Configure
	# run: \|
	# source /etc/profile.d/rocm.sh
	# which clang
	# which clang++
	# which hipcc
	# hipcc --version
	# hipconfig --full
	# cmake -B${{runner.workspace}}/build-hip \
	# -DCMAKE_BUILD_TYPE:STRING=Release \
	# -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
	# -DCMAKE_CXX_COMPILER:STRING=$(which clang++) \
	# -DCMAKE_C_COMPILER:STRING=$(which clang) \
	# -DPELE_ENABLE_MPI:BOOL=OFF \
	# -DPELE_ENABLE_HIP:BOOL=ON \
	# -DPELE_EXCLUDE_BUILD_IN_CI:BOOL=ON \
	# -DAMReX_AMD_ARCH:STRING=gfx90a \
	# -DCMAKE_HIP_ARCHITECTURES:STRING=gfx90a \
	# -DAMDGPU_TARGETS:STRING=gfx90a \
	# -DGPU_TARGETS:STRING=gfx90a \
	# -DAMReX_GPU_RDC:BOOL=OFF \
	# -DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	# -DPELE_ENABLE_MASA:BOOL=OFF \
	# -DCMAKE_CXX_COMPILER_LAUNCHER:STRING=ccache \
	# ${{github.workspace}}
	# - name: Build
	# run: \|
	# echo "::add-matcher::.github/problem-matchers/gcc.json"
	# source /etc/profile.d/rocm.sh
	# ccache -z
	# cmake --build ${{runner.workspace}}/build-hip --parallel ${{env.NPROCS}}
	# - name: Ccache Report
	# run: \|
	# ccache -s
	# du -hs ~/.cache/ccache
	# GPU-Intel:
	# name: GPU-SYCL
	# needs: [Formatting, CPU-GNUmake]
	# runs-on: ubuntu-24.04
	# steps:
	# - name: Clone
	# uses: actions/checkout@v4
	# with:
	# submodules: 'recursive'
	# - name: Setup
	# run: \|
	# echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESSLEVEL=1" >> $GITHUB_ENV
	# echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	# echo "CCACHE_MAXSIZE=150M" >> $GITHUB_ENV
	# echo "CCACHE_DEPEND=1" >> $GITHUB_ENV
	# - name: Dependencies
	# run: \|
	# ${{github.workspace}}/Submodules/PelePhysics/Submodules/amrex/.github/workflows/dependencies/ubuntu_free_disk_space.sh
	# sudo wget https://apt.repos.intel.com/intel-gpg-keys/GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
	# sudo apt-key add GPG-PUB-KEY-INTEL-SW-PRODUCTS.PUB
	# echo "deb https://apt.repos.intel.com/oneapi all main" \| sudo tee /etc/apt/sources.list.d/oneAPI.list
	# sudo apt-get update
	# sudo apt-get install -y intel-oneapi-compiler-dpcpp-cpp=2024.2.1-1079 intel-oneapi-mkl-devel=2024.2.2-15
	# - name: Install Ccache
	# run: \|
	# wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	# tar xvf ccache-4.8-linux-x86_64.tar.xz
	# sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	# - name: Set Up Ccache
	# uses: actions/cache@v4
	# with:
	# path: ~/.cache/ccache
	# key: ccache-${{github.workflow}}-${{github.job}}-git-${{github.sha}}
	# restore-keys: \|
	# ccache-${{github.workflow}}-${{github.job}}-git-
	# - name: Configure
	# run: \|
	# set +e
	# source /opt/intel/oneapi/setvars.sh
	# set -e
	# cmake -B${{runner.workspace}}/build-sycl \
	# -DCMAKE_BUILD_TYPE:STRING=Release \
	# -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
	# -DCMAKE_CXX_COMPILER:STRING=$(which icpx) \
	# -DCMAKE_C_COMPILER:STRING=$(which icx) \
	# -DCMAKE_CXX_FLAGS:STRING=-fsycl \
	# -DPELE_ENABLE_MPI:BOOL=OFF \
	# -DPELE_ENABLE_MASA:BOOL=OFF \
	# -DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	# -DPELE_ENABLE_SYCL:BOOL=ON \
	# -DPELE_EXCLUDE_BUILD_IN_CI:BOOL=ON \
	# -DCMAKE_CXX_COMPILER_LAUNCHER:STRING=ccache \
	# ${{github.workspace}}
	# - name: Build
	# run: \|
	# set +e
	# source /opt/intel/oneapi/setvars.sh
	# set -e
	# ccache -z
	# cmake --build ${{runner.workspace}}/build-sycl --parallel ${{env.NPROCS}}
	# - name: Ccache Report
	# run: \|
	# ccache -s
	# du -hs ~/.cache/ccache
	## Lint-cppcheck:
	## needs: Formatting
	## runs-on: macos-12
	## steps:
	## - name: Clone
	## uses: actions/checkout@v4
	## with:
	## submodules: 'recursive'
	## - name: Dependencies
	## run: \|
	## export HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK=TRUE
	## wget https://raw.githubusercontent.com/Homebrew/homebrew-core/9b0e3d32f590458ae9e5dbf01943b39845b5315e/Formula/cppcheck.rb
	## brew install cppcheck.rb
	## - name: Configure
	## run: \|
	## cmake -B${{runner.workspace}}/build-cppcheck \
	## -DPELE_ENABLE_MPI:BOOL=OFF \
	## -DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	## -DPELE_ENABLE_MASA:BOOL=OFF \
	## -DPELE_ENABLE_CPPCHECK:BOOL=ON \
	## ${{github.workspace}}
	## - name: Check
	## working-directory: ${{runner.workspace}}/build-cppcheck
	## run: make cppcheck
	## - name: Full report
	## working-directory: ${{runner.workspace}}/build-cppcheck/cppcheck
	## run: cat cppcheck-full-report.txt
	## - name: Short report
	## working-directory: ${{runner.workspace}}/build-cppcheck/cppcheck
	## run: \|
	## echo "::add-matcher::.github/problem-matchers/cppcheck.json"
	## awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' < cppcheck-report.txt > cppcheck-warnings.txt
	## cat cppcheck-warnings.txt
	## export return=$(tail -n 1 cppcheck-warnings.txt \| awk '{print $2}')
	## exit ${return}
	# Lint-clang-tidy:
	# needs: Formatting
	# runs-on: ubuntu-24.04
	# steps:
	# - name: Clone
	# uses: actions/checkout@v4
	# with:
	# submodules: 'recursive'
	# - name: Setup
	# run: \|
	# echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESS=1" >> $GITHUB_ENV
	# echo "CCACHE_COMPRESSLEVEL=1" >> $GITHUB_ENV
	# echo "CCACHE_LOGFILE=${{github.workspace}}/ccache.log.txt" >> $GITHUB_ENV
	# echo "CCACHE_EXTRAFILES=${{github.workspace}}/.clang-tidy" >> $GITHUB_ENV
	# echo "CCACHE_MAXSIZE=50M" >> $GITHUB_ENV
	# echo "CTCACHE_DIR=~/.cache/ctcache" >> $GITHUB_ENV
	# - name: Install Ccache
	# run: \|
	# wget https://github.com/ccache/ccache/releases/download/v4.8/ccache-4.8-linux-x86_64.tar.xz
	# sudo curl https://raw.githubusercontent.com/matus-chochlik/ctcache/7fd516e91c17779cbc6fc18bd119313d9532dd90/clang-tidy-cache -Lo /usr/bin/clang-tidy-cache
	# tar xvf ccache-4.8-linux-x86_64.tar.xz
	# sudo cp -f ccache-4.8-linux-x86_64/ccache /usr/local/bin/
	# sudo chmod +x /usr/bin/clang-tidy-cache
	# mkdir -p ~/.cache/ctcache
	# - name: Set Up Ccache
	# uses: actions/cache@v4
	# with:
	# path: ~/.cache
	# key: ccache-${{github.workflow}}-${{github.job}}-git-${{github.sha}}
	# restore-keys: \|
	# ccache-${{github.workflow}}-${{github.job}}-git-
	# - name: Configure
	# run: \|
	# cmake -B${{runner.workspace}}/build-clang-tidy \
	# -DCMAKE_BUILD_TYPE:STRING=Release \
	# -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \
	# -DCMAKE_CXX_COMPILER:STRING=clang++ \
	# -DCMAKE_C_COMPILER:STRING=clang \
	# -DPELE_ENABLE_MPI:BOOL=OFF \
	# -DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	# -DPELE_ENABLE_MASA:BOOL=OFF \
	# -DPELE_ENABLE_CLANG_TIDY:BOOL=ON \
	# -DPELE_EXCLUDE_BUILD_IN_CI:BOOL=ON \
	# -DCMAKE_CXX_COMPILER_LAUNCHER:STRING=ccache \
	# ${{github.workspace}}
	# - name: Check
	# working-directory: ${{runner.workspace}}/build-clang-tidy
	# run: \|
	# cmake --build . --parallel ${{env.NPROCS}} 2>&1 \| tee -a clang-tidy-full-report.txt
	# egrep "Warning:\|Error:\|warning:\|error:" clang-tidy-full-report.txt \
	# \| egrep -v "Submodules/amrex\|Submodules/sundials" \
	# \| egrep -v "ld: warning:" \| sort \| uniq \
	# \| awk 'BEGIN{i=0}{print $0}{i++}END{print "Warnings: "i}' > clang-tidy-warnings.txt
	# - name: Ccache Report
	# run: \|
	# ls ~/.cache
	# ls ~/.cache/ccache
	# du -hs ~/.cache/ccache
	# ls ~/.cache/ctcache
	# du -hs ~/.cache/ctcache
	# ccache -s
	# - name: Full report
	# working-directory: ${{runner.workspace}}/build-clang-tidy
	# run: cat clang-tidy-full-report.txt
	# - name: Short report
	# working-directory: ${{runner.workspace}}/build-clang-tidy
	# run: \|
	# echo "::add-matcher::.github/problem-matchers/gcc.json"
	# cat clang-tidy-warnings.txt
	# export return=$(tail -n 1 clang-tidy-warnings.txt \| awk '{print $2}')
	# exit ${return}
	# Lint-codeql:
	# needs: Formatting
	# runs-on: ubuntu-24.04
	# steps:
	# - name: Clone
	# uses: actions/checkout@v4
	# with:
	# submodules: 'recursive'
	# - name: Initialize CodeQL
	# uses: github/codeql-action/init@v3
	# with:
	# languages: cpp
	# queries: +security-and-quality
	# config-file: ./.github/codeql/codeql-config.yml
	# - name: Configure
	# run: \|
	# echo "NPROCS=$(nproc)" >> $GITHUB_ENV
	# cmake -B${{runner.workspace}}/build-codeql \
	# -DCMAKE_BUILD_TYPE:STRING=Debug \
	# -DCMAKE_CXX_COMPILER:STRING=clang++ \
	# -DCMAKE_C_COMPILER:STRING=clang \
	# -DPELE_ENABLE_MPI:BOOL=OFF \
	# -DPELE_ENABLE_FCOMPARE_FOR_TESTS:BOOL=OFF \
	# -DPELE_ENABLE_MASA:BOOL=OFF \
	# -DPELE_EXCLUDE_BUILD_IN_CI:BOOL=ON \
	# -DPELE_ENABLE_CLANG_TIDY:BOOL=OFF \
	# ${{github.workspace}}
	# - name: Build
	# run: \|
	# cmake --build ${{runner.workspace}}/build-codeql --parallel ${{env.NPROCS}}
	# - name: Perform CodeQL Analysis
	# uses: github/codeql-action/analyze@v3
	# with:
	# category: "/language:cpp"
	# upload: False
	# output: sarif-results
	# - name: Filter CodeQL sarif
	# uses: advanced-security/filter-sarif@v1
	# with:
	# patterns: \|
	# -/Submodules/sundials/
	# -/Submodules/amrex/
	# input: sarif-results/cpp.sarif
	# output: sarif-results/cpp.sarif
	# - name: Upload CodeQL sarif
	# uses: github/codeql-action/upload-sarif@v3
	# with:
	# sarif_file: sarif-results/cpp.sarif
	# Lint-codespell:
	# needs: Formatting
	# runs-on: ubuntu-24.04
	# steps:
	# - name: Clone
	# uses: actions/checkout@v4
	# with:
	# submodules: false
	# - name: Python
	# uses: actions/setup-python@v5
	# with:
	# python-version: '3.12'
	# - name: Dependencies
	# run: \|
	# python -m pip install --upgrade pip
	# pip install codespell
	# - name: Run codespell
	# run: codespell
	# Save-PR-Number:
	# if: github.event_name == 'pull_request'
	# runs-on: ubuntu-24.04
	# steps:
	# - name: Save PR number
	# env:
	# PR_NUMBER: ${{ github.event.number }}
	# run: \|
	# echo $PR_NUMBER > pr_number.txt
	# - uses: actions/upload-artifact@v4
	# with:
	# name: pr_number
	# path: pr_number.txt
	# retention-days: 1

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Update CI to ubuntu-24.04 #2964

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