fix RY2R calc in regrid for manifold #1337
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| name: PeleLMeX_linux | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [ main, development ] | |
| pull_request: | |
| branches: [ main, development ] | |
| concurrency: | |
| group: ${{ github.ref }}-${{ github.head_ref }}-PeleLMeX_linux | |
| cancel-in-progress: true | |
| jobs: | |
| # Build and Run the EB_FlowPastCylinder RegTest with GNU9.3 and MPI support | |
| #FPC2D: | |
| # name: [email protected] MPI Run [FPC2DDBG] | |
| # runs-on: ubuntu-latest | |
| # env: | |
| # {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"} | |
| # steps: | |
| # - uses: actions/checkout@v4 | |
| # - name: System Dependencies | |
| # run: .github/workflows/dependencies/dependencies_gcc10.sh | |
| # - name: Repo Dependencies | |
| # run: Utils/CloneDeps.sh | |
| # - name: Build | |
| # env: | |
| # AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex | |
| # PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics | |
| # PELE_HOME: ${GITHUB_WORKSPACE} | |
| # AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro | |
| # SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials | |
| # working-directory: ./Exec/RegTests/EB_FlowPastCylinder/ | |
| # run: | | |
| # make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE | |
| # make -j 2 COMP=gnu USE_MPI=TRUE DEBUG=TRUE | |
| # - name: Run | |
| # working-directory: ./Exec/RegTests/EB_FlowPastCylinder/ | |
| # run: | | |
| # ./PeleLMeX2d.gnu.DEBUG.MPI.ex input.2d-regt amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.fpe_trap_invalid=1 amrex.fpe_trap_zero=1 amrex.fpe_trap_overflow=1 | |
| # ./PeleLMeX2d.gnu.DEBUG.MPI.ex input.2d-regt_WallBump amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 | |
| # make -j 2 COMP=gnu USE_MPI=TRUE | |
| # - name: RunDNS | |
| # working-directory: ./Exec/RegTests/HITDecay/ | |
| # run: | | |
| # ./PeleLMeX3d.gnu.MPI.ex input.3d amr.max_step=10 amr.plot_int=-1 amr.check_int=-1 | |
| # - name: RunLES_Smago | |
| # working-directory: ./Exec/RegTests/HITDecay/ | |
| # run: | | |
| # ./PeleLMeX3d.gnu.MPI.ex input.3d_les amr.max_step=10 amr.plot_int=-1 amr.check_int=-1 | |
| # - name: RunLES_WALE | |
| # working-directory: ./Exec/RegTests/HITDecay/ | |
| # run: | | |
| # ./PeleLMeX3d.gnu.MPI.ex input.3d_les peleLM.les_model="WALE" amr.max_step=10 amr.plot_int=-1 amr.check_int=-1 | |
| # Build and Run the EB_PipeFlow RegTest with GNU9.3 and MPI support | |
| EBPF3D: | |
| name: [email protected] MPI Run [EBPF3D] | |
| runs-on: ubuntu-latest | |
| env: | |
| {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: System Dependencies | |
| run: .github/workflows/dependencies/dependencies_gcc10.sh | |
| - name: Repo Dependencies | |
| run: Utils/CloneDeps.sh | |
| - name: Build | |
| working-directory: ./Exec/RegTests/EB_PipeFlow/ | |
| run: | | |
| make TPL COMP=gnu USE_MPI=TRUE | |
| make -j 2 COMP=gnu USE_MPI=TRUE | |
| - name: Run | |
| working-directory: ./Exec/RegTests/EB_PipeFlow/ | |
| run: | | |
| mpirun -n 2 ./PeleLMeX3d.gnu.MPI.ex input.3d-regt amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 amr.n_cell=128 32 32 | |
| # Build and Run the SootRadTest RegTest with GNU9.3 and MPI support | |
| SOOTRAD: | |
| name: [email protected] MPI Run [SootRadTest] | |
| runs-on: ubuntu-latest | |
| env: | |
| {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Repo Dependencies | |
| run: | | |
| Utils/CloneDeps.sh | |
| - name: System Dependencies | |
| run: .github/workflows/dependencies/dependencies_gcc10.sh | |
| - name: Build Release | |
| working-directory: ./Exec/RegTests/SootRadTest/ | |
| run: | | |
| make TPL COMP=gnu USE_MPI=TRUE TINY_PROFILE=FALSE | |
| make -j 2 COMP=gnu USE_MPI=TRUE TINY_PROFILE=FALSE | |
| - name: Run Release | |
| working-directory: ./Exec/RegTests/SootRadTest/ | |
| run: | | |
| mpirun -n 2 ./PeleLMeX2d.gnu.MPI.ex soot-rad-2d.inp amr.max_step=2 amr.plot_int=2 amr.check_int=2 amrex.abort_on_unused_inputs=1 | |
| - name: Build Debug | |
| working-directory: ./Exec/RegTests/SootRadTest/ | |
| run: | | |
| make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE TINY_PROFILE=FALSE | |
| make -j 2 COMP=gnu USE_MPI=TRUE DEBUG=TRUE TINY_PROFILE=FALSE | |
| - name: Run Debug | |
| working-directory: ./Exec/RegTests/SootRadTest/ | |
| run: | | |
| mpirun -n 2 ./PeleLMeX2d.gnu.DEBUG.MPI.ex soot-rad-2d.inp amr.max_step=2 amr.plot_int=2 amr.check_int=2 amrex.abort_on_unused_inputs=1 | |
| # Build and Run the EB_BackwardStepFlame RegTest with GNU9.3 and MPI support | |
| EBBFS: | |
| name: [email protected] MPI Run [EBBFS] | |
| runs-on: ubuntu-latest | |
| env: | |
| {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: System Dependencies | |
| run: .github/workflows/dependencies/dependencies_gcc10.sh | |
| - name: Repo Dependencies | |
| run: Utils/CloneDeps.sh | |
| - name: Build | |
| working-directory: ./Exec/RegTests/EB_BackwardStepFlame/ | |
| run: | | |
| make TPL COMP=gnu USE_MPI=TRUE | |
| make -j 2 COMP=gnu USE_MPI=TRUE | |
| - name: Run | |
| working-directory: ./Exec/RegTests/EB_BackwardStepFlame/ | |
| run: | | |
| mpirun -n 2 ./PeleLMeX2d.gnu.MPI.ex input.2d amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 | |
| # Build and Run the Efield flamesheet with GNU9.3 and MPI support | |
| EFIELD: | |
| name: [email protected] MPI Run [EFIELD] | |
| runs-on: ubuntu-latest | |
| env: | |
| {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: System Dependencies | |
| run: .github/workflows/dependencies/dependencies_gcc10.sh | |
| - name: Repo Dependencies | |
| run: Utils/CloneDeps.sh | |
| - name: Build | |
| working-directory: ./Exec/Efield/FlameSheetIons | |
| run: | | |
| make TPL COMP=gnu USE_MPI=TRUE | |
| make -j 2 COMP=gnu USE_MPI=TRUE | |
| - name: Run | |
| working-directory: ./Exec/Efield/FlameSheetIons | |
| run: | | |
| mpirun -n 2 ./PeleLMeX2d.gnu.MPI.EF.ex input.2d-regt amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 | |
| # Build and Run the TurbInflow RegTest in DEBUG with GNU9.3 and MPI support | |
| TI3D: | |
| name: [email protected] MPI Run [TI3DDBG] | |
| runs-on: ubuntu-latest | |
| env: | |
| {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: System Dependencies | |
| run: | | |
| .github/workflows/dependencies/dependencies_gcc10.sh | |
| sudo apt-get install -y python3-setuptools | |
| python3 -m pip install --user scipy | |
| python3 -m pip install --user matplotlib | |
| python3 -m pip install --user numpy | |
| - name: Repo Dependencies | |
| run: Utils/CloneDeps.sh | |
| - name: GenerateTurbFile | |
| working-directory: ./Submodules/PelePhysics/Support/TurbFileHIT | |
| run: | | |
| ./gen_hit_ic.py -k0 4 -N 32 -Nk 256 | |
| make -j 2 COMP=gnu | |
| ./PeleTurb3d.gnu.ex input hit_file=hit_ic_4_32.dat input_ncell=32 amrex.abort_on_unused_inputs=1 | |
| mkdir ${GITHUB_WORKSPACE}/Exec/RegTests/TurbInflow/TurbFileHIT | |
| cp -r TurbTEST ${GITHUB_WORKSPACE}/Exec/RegTests/TurbInflow/TurbFileHIT | |
| - name: Build | |
| working-directory: ./Exec/RegTests/TurbInflow/ | |
| run: | | |
| make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE | |
| make -j 2 COMP=gnu USE_MPI=TRUE DEBUG=TRUE | |
| - name: Run | |
| working-directory: ./Exec/RegTests/TurbInflow/ | |
| run: | | |
| mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 | |
| mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d_twoInjs peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 | |
| mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d_posX peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 | |
| mpirun -n 2 ./PeleLMeX3d.gnu.DEBUG.MPI.ex input.3d_BoxLoZ peleLM.num_init_iter=1 amr.n_cell=32 32 32 amr.max_step=2 amr.plot_int=-1 amr.check_int=-1 amrex.abort_on_unused_inputs=1 | |
| # Build and Run the SprayTest RegTest with GNU9.3 and MPI support | |
| SPRAY: | |
| name: [email protected] MPI Run [SPRAY] | |
| runs-on: ubuntu-latest | |
| env: | |
| {CXXFLAGS: "-Werror -Wshadow -Woverloaded-virtual -Wunreachable-code"} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: System Dependencies | |
| run: | | |
| .github/workflows/dependencies/dependencies_gcc10.sh | |
| sudo apt-get install -y python3-setuptools | |
| python3 -m pip install --user numpy | |
| python3 -m pip install --user argparse | |
| - name: Repo Dependencies | |
| run: Utils/CloneDeps.sh | |
| - name: Build AMReX Tools | |
| env: | |
| AMREX_HOME: ${GITHUB_WORKSPACE}/Submodules/PelePhysics/Submodules/amrex | |
| working-directory: ./Submodules/PelePhysics/Submodules/amrex/Tools/Plotfile | |
| run: | | |
| make | |
| - name: Build PeleLMeX | |
| working-directory: ./Exec/RegTests/SprayTest/ | |
| run: | | |
| make TPL COMP=gnu USE_MPI=TRUE | |
| make -j 2 COMP=gnu USE_MPI=TRUE | |
| - name: Run | |
| working-directory: ./Exec/RegTests/SprayTest/ | |
| run: | | |
| cp ${GITHUB_WORKSPACE}/Submodules/PelePhysics/Submodules/amrex/Tools/Plotfile/fcompare.gnu.ex . | |
| sed -i "s/mpiexec -n 1/mpiexec -n 2/g" multiRuns.py | |
| ./multiRuns.py | |
| ./compareOutput.py |