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Diagnostic updates #130

Diagnostic updates

Diagnostic updates #130

Workflow file for this run

name: unitTest
on:
workflow_dispatch:
push:
branches: [ main, development ]
pull_request:
branches: [ main, development ]
concurrency:
group: ${{ github.ref }}-${{ github.head_ref }}-unitTest
cancel-in-progress: true
jobs:
# Build the RegTests/UnitTest
UT_FS:
name: UnitTest_FS
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
with:
submodules: true
- name: System Dependencies
run: |
.github/workflows/dependencies/dependencies_gcc10.sh
sudo apt-get install -y python3-setuptools
python3 -m pip install --user numpy
python3 -m pip install --user argparse
python3 -m pip install --user matplotlib
- name: LMeX Reference
run: |
mkdir buildRef
git clone --recursive -b development https://github.com/AMReX-Combustion/PeleLMeX.git buildRef/PeleLMeX
- name: Set Environment Variables
run: |
echo "AMREX_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/amrex" >> $GITHUB_ENV
echo "PELE_PHYSICS_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/PelePhysics" >> $GITHUB_ENV
echo "AMREX_HYDRO_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/AMReX-Hydro" >> $GITHUB_ENV
echo "SUNDIALS_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/sundials" >> $GITHUB_ENV
echo "PELELMEX_HOME=${{github.workspace}}/buildRef/PeleLMeX/" >> $GITHUB_ENV
- name: Build Reference PeleLMeX
working-directory: ${{env.PELELMEX_HOME}}/Exec/UnitTests/DodecaneLu
run: |
make -j2 TPL COMP=gnu DEBUG=FALSE
make -j2 COMP=gnu DEBUG=FALSE
- name: Run Reference Case
working-directory: ${{env.PELELMEX_HOME}}/Exec/UnitTests/DodecaneLu
run: |
./PeleLMeX3d.gnu.MPI.ex inputs.3d
- name: Reset Environment Variables
run: |
echo "AMREX_HOME=${{github.workspace}}/Submodules/amrex" >> $GITHUB_ENV
echo "PELE_PHYSICS_HOME=${{github.workspace}}/Submodules/PelePhysics" >> $GITHUB_ENV
echo "AMREX_HYDRO_HOME=${{github.workspace}}/Submodules/AMReX-Hydro" >> $GITHUB_ENV
echo "SUNDIALS_HOME=${{github.workspace}}/Submodules/sundials" >> $GITHUB_ENV
echo "PELELMEX_HOME=${{github.workspace}}" >> $GITHUB_ENV
- name: Build AMReX Tools
working-directory: ${{env.AMREX_HOME}}/Tools/Plotfile
run: |
make -j2 VERBOSE=FALSE
- name: Build PeleLMeX
working-directory: ${{env.PELELMEX_HOME}}/Exec/UnitTests/DodecaneLu
run: |
make -j2 TPL COMP=gnu DEBUG=FALSE
make -j2 COMP=gnu DEBUG=FALSE
- name: Run Case
working-directory: ${{env.PELELMEX_HOME}}/Exec/UnitTests/DodecaneLu
run: |
cp ${{env.AMREX_HOME}}/Tools/Plotfile/fcompare.gnu.ex .
./PeleLMeX3d.gnu.MPI.ex inputs.3d
./fcompare.gnu.ex pltEvaluate ${{github.workspace}}/buildRef/PeleLMeX/Exec/UnitTests/DodecaneLu/pltEvaluate