Update PelePhysics - Use Sundials submod in gmake (#235)

* update pelephysics for sundials submod gmake * default submodule paths * CI fixes hopefully * linux workflow add SUNDIALS variable * update the rest of the workflows * update PelePhysics
AMReX-Combustion · Aug 29, 2023 · df37020 · df37020
1 parent fbbe5a9
commit df37020
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Showing 10 changed files with 36 additions and 9 deletions.
diff --git a/.github/workflows/convergenceTesting.yml b/.github/workflows/convergenceTesting.yml
@@ -39,6 +39,7 @@ jobs:
          AMREX_HOME: ${GITHUB_WORKSPACE}/build/amrex
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME: ${GITHUB_WORKSPACE}/build/sundials
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
       working-directory: ./Exec/RegTests/PeriodicCases
       run: |

diff --git a/.github/workflows/cuda.yml b/.github/workflows/cuda.yml
@@ -28,6 +28,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME: ${GITHUB_WORKSPACE}/build/sundials
       run: |
         export PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:${PATH}
         export LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64:${LD_LIBRARY_PATH}
@@ -51,6 +52,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME: ${GITHUB_WORKSPACE}/build/sundials
       run: |
         export PATH=/usr/local/nvidia/bin:/usr/local/cuda/bin:${PATH}
         export LD_LIBRARY_PATH=/usr/local/nvidia/lib:/usr/local/nvidia/lib64:${LD_LIBRARY_PATH}

diff --git a/.github/workflows/hip.yml b/.github/workflows/hip.yml
@@ -28,6 +28,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME: ${GITHUB_WORKSPACE}/build/sundials
       run: |
         source /etc/profile.d/rocm.sh
         hipcc --version
@@ -51,6 +52,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME: ${GITHUB_WORKSPACE}/build/sundials
       run: |
         source /etc/profile.d/rocm.sh
         hipcc --version

diff --git a/.github/workflows/intel.yml b/.github/workflows/intel.yml
@@ -28,6 +28,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME: ${GITHUB_WORKSPACE}/build/sundials
       run: |
         set +e
         source /opt/intel/oneapi/setvars.sh
@@ -54,6 +55,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME: ${GITHUB_WORKSPACE}/build/sundials
       run: |
         set +e
         source /opt/intel/oneapi/setvars.sh

diff --git a/.github/workflows/linux.yml b/.github/workflows/linux.yml
@@ -30,6 +30,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       run: |
         cd Exec/RegTests/FlameSheet/
         make help
@@ -58,6 +59,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       run: |
         cd Exec/RegTests/FlameSheet/
         make TPL COMP=gnu
@@ -93,6 +95,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       run: |
         cd Exec/RegTests/FlameSheet/
         make TPL COMP=gnu USE_OMP=TRUE
@@ -116,6 +119,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/PeriodicCases/
       run: |
         make TPL COMP=gnu USE_MPI=FALSE
@@ -143,6 +147,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/HotBubble/
       run: |
         make TPL COMP=gnu USE_MPI=TRUE
@@ -170,6 +175,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/HotBubble/
       run: |
         make TPL COMP=gnu DEBUG=TRUE USE_MPI=FALSE
@@ -197,6 +203,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/EnclosedFlame/
       run: |
         make TPL COMP=gnu USE_MPI=TRUE
@@ -224,6 +231,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/EB_FlowPastCylinder/
       run: |
         make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE
@@ -252,6 +260,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/HITDecay/
       run: |
         make TPL COMP=gnu USE_MPI=TRUE
@@ -288,6 +297,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/EB_PipeFlow/
       run: |
         make TPL COMP=gnu USE_MPI=TRUE
@@ -315,6 +325,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/TurbInflow/TurbFileHIT
       run: |
         make -j 2 COMP=gnu
@@ -325,6 +336,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
       working-directory: ./Exec/RegTests/TurbInflow/
       run: |
         make TPL COMP=gnu USE_MPI=TRUE DEBUG=TRUE
@@ -365,6 +377,7 @@ jobs:
          PELE_PHYSICS_HOME: ${GITHUB_WORKSPACE}/build/PelePhysics
          PELELMEX_HOME: ${GITHUB_WORKSPACE}
          AMREX_HYDRO_HOME: ${GITHUB_WORKSPACE}/build/AMReX-Hydro
+         SUNDIALS_HOME : ${GITHUB_WORKSPACE}/build/sundials
          PELEMP_HOME: ${GITHUB_WORKSPACE}/build/PeleMP
       working-directory: ./Exec/RegTests/SprayTest/
       run: |

diff --git a/.github/workflows/nightlyTest.yml b/.github/workflows/nightlyTest.yml
@@ -34,6 +34,7 @@ jobs:
               echo "AMREX_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/amrex" >> $GITHUB_ENV
               echo "PELE_PHYSICS_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/PelePhysics" >> $GITHUB_ENV
               echo "AMREX_HYDRO_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/AMReX-Hydro" >> $GITHUB_ENV
+              echo "SUNDIALS_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/sundials" >> $GITHUB_ENV
               echo "PELELMEX_HOME=${{github.workspace}}/buildRef/PeleLMeX/" >> $GITHUB_ENV
     - name: Build Reference PeleLMeX
       working-directory: ${{env.PELELMEX_HOME}}/Exec/UnitTests/DodecaneLu
@@ -61,6 +62,7 @@ jobs:
               echo "AMREX_HOME=${{github.workspace}}/Submodules/amrex" >> $GITHUB_ENV
               echo "PELE_PHYSICS_HOME=${{github.workspace}}/Submodules/PelePhysics" >> $GITHUB_ENV
               echo "AMREX_HYDRO_HOME=${{github.workspace}}/Submodules/AMReX-Hydro" >> $GITHUB_ENV
+              echo "SUNDIALS_HOME=${{github.workspace}}/Submodules/sundials" >> $GITHUB_ENV
               echo "PELELMEX_HOME=${{github.workspace}}" >> $GITHUB_ENV
     - name: Build AMReX Tools
       working-directory: ${{env.AMREX_HOME}}/Tools/Plotfile

diff --git a/.github/workflows/unitTest.yml b/.github/workflows/unitTest.yml
@@ -36,6 +36,7 @@ jobs:
               echo "AMREX_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/amrex" >> $GITHUB_ENV
               echo "PELE_PHYSICS_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/PelePhysics" >> $GITHUB_ENV
               echo "AMREX_HYDRO_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/AMReX-Hydro" >> $GITHUB_ENV
+              echo "SUNDIALS_HOME=${{github.workspace}}/buildRef/PeleLMeX/Submodules/sundials" >> $GITHUB_ENV
               echo "PELELMEX_HOME=${{github.workspace}}/buildRef/PeleLMeX/" >> $GITHUB_ENV
     - name: Build Reference PeleLMeX
       working-directory: ${{env.PELELMEX_HOME}}/Exec/UnitTests/DodecaneLu
@@ -51,6 +52,7 @@ jobs:
               echo "AMREX_HOME=${{github.workspace}}/Submodules/amrex" >> $GITHUB_ENV
               echo "PELE_PHYSICS_HOME=${{github.workspace}}/Submodules/PelePhysics" >> $GITHUB_ENV
               echo "AMREX_HYDRO_HOME=${{github.workspace}}/Submodules/AMReX-Hydro" >> $GITHUB_ENV
+              echo "SUNDIALS_HOME=${{github.workspace}}/Submodules/sundials" >> $GITHUB_ENV
               echo "PELELMEX_HOME=${{github.workspace}}" >> $GITHUB_ENV
     - name: Build AMReX Tools
       working-directory: ${{env.AMREX_HOME}}/Tools/Plotfile

diff --git a/Submodules/PelePhysics b/Submodules/PelePhysics
diff --git a/Utils/CloneDeps.sh b/Utils/CloneDeps.sh
@@ -11,3 +11,5 @@ git clone https://github.com/AMReX-Codes/AMReX-Hydro.git build/AMReX-Hydro
 export AMREX_HYDRO_HOME=${PWD}/build/AMReX-Hydro
 git clone https://github.com/AMReX-Combustion/PeleMP.git build/PeleMP
 export PELEMP_HOME=${PWD}/build/PeleMP
+git clone https://github.com/LLNL/sundials.git build/sundials
+export SUNDIALS_HOME=${PWD}/build/sundials
diff --git a/Utils/Make.PeleLMeX b/Utils/Make.PeleLMeX
@@ -1,7 +1,8 @@
-PELELMEX_HOME ?= /path/to/PeleLMeX
-AMREX_HOME ?= /path/to/AMREX
-PELE_PHYSICS_HOME ?= /path/to/PELE_PHYSICS_HOME
-AMREX_HYDRO_HOME ?= /path/to/AMREX_HYDRO_HOME
+PELELMEX_HOME ?= ../
+AMREX_HOME ?= $(abspath $(lastword $(PELELMEX_HOME)/Submodules/amrex))
+PELE_PHYSICS_HOME ?= $(abspath $(lastword $(PELELMEX_HOME)/Submodules/PelePhysics))
+AMREX_HYDRO_HOME ?= $(abspath $(lastword $(PELELMEX_HOME)/Submodules/AMReX-Hydro))
+SUNDIALS_HOME ?= $(abspath $(lastword $(PELELMEX_HOME)/Submodules/sundials))
 
 USE_SUNDIALS = TRUE
 BL_NO_FORT = TRUE
@@ -162,7 +163,7 @@ AMReX_buildInfo.cpp:
 	$(AMREX_HOME)/Tools/C_scripts/makebuildinfo_C.py \
       --amrex_home "$(AMREX_HOME)" \
       --COMP "$(COMP)" --COMP_VERSION "$(COMP_VERSION)" \
-      --GIT "$(PELELMEX_HOME) $(AMREX_HOME) $(PELE_PHYSICS_HOME) $(AMREX_HYDRO_HOME)"
+      --GIT "$(PELELMEX_HOME) $(AMREX_HOME) $(PELE_PHYSICS_HOME) $(AMREX_HYDRO_HOME) $(SUNDIALS_HOME)"
 
 #---------------
 # Rules
@@ -184,12 +185,12 @@ print-%::
 #---------------
 TPL:
 	@echo "==> Building SUNDIALS library"
-	@cd $(PELE_PHYSICS_HOME)/ThirdParty && $(MAKE) $(MAKEFLAGS) sundials AMREX_HOME=$(AMREX_HOME) USE_CUDA=$(USE_CUDA) USE_HIP=$(USE_HIP) USE_SYCL=$(USE_SYCL) PELE_USE_MAGMA=$(PELE_USE_MAGMA) PELE_USE_KLU=$(PELE_USE_KLU) DEBUG=$(DEBUG) COMP=$(HOSTCC) NVCC=$(COMP)
+	@cd $(PELE_PHYSICS_HOME)/ThirdParty && $(MAKE) $(MAKEFLAGS) sundials SUNDIALS_HOME=$(SUNDIALS_HOME) AMREX_HOME=$(AMREX_HOME) USE_CUDA=$(USE_CUDA) USE_HIP=$(USE_HIP) USE_SYCL=$(USE_SYCL) PELE_USE_MAGMA=$(PELE_USE_MAGMA) PELE_USE_KLU=$(PELE_USE_KLU) DEBUG=$(DEBUG) COMP=$(HOSTCC) NVCC=$(COMP)
 
 TPLclean:
 	@echo "==> Removing SUNDIALS library"
-	cd $(PELE_PHYSICS_HOME)/ThirdParty; $(MAKE) $(MAKEFLAGS) AMREX_HOME=$(AMREX_HOME) USE_CUDA=$(USE_CUDA) USE_HIP=$(USE_HIP) USE_SYCL=$(USE_SYCL) PELE_USE_KLU=$(PELE_USE_KLU) PELE_USE_MAGMA=$(PELE_USE_MAGMA) DEBUG=$(DEBUG) COMP=$(HOSTCC) NVCC=$(COMP) clean
+	cd $(PELE_PHYSICS_HOME)/ThirdParty; $(MAKE) $(MAKEFLAGS) SUNDIALS_HOME=$(SUNDIALS_HOME) AMREX_HOME=$(AMREX_HOME) USE_CUDA=$(USE_CUDA) USE_HIP=$(USE_HIP) USE_SYCL=$(USE_SYCL) PELE_USE_KLU=$(PELE_USE_KLU) PELE_USE_MAGMA=$(PELE_USE_MAGMA) DEBUG=$(DEBUG) COMP=$(HOSTCC) NVCC=$(COMP) clean
 
 TPLrealclean:
 	@echo "==> Removing SUNDIALS library"
-	cd $(PELE_PHYSICS_HOME)/ThirdParty; $(MAKE) $(MAKEFLAGS) AMREX_HOME=$(AMREX_HOME) USE_CUDA=$(USE_CUDA) USE_HIP=$(USE_HIP) USE_SYCL=$(USE_SYCL) PELE_USE_KLU=$(PELE_USE_KLU) PELE_USE_MAGMA=$(PELE_USE_MAGMA) DEBUG=$(DEBUG) COMP=$(HOSTCC) NVCC=$(COMP) realclean
+	cd $(PELE_PHYSICS_HOME)/ThirdParty; $(MAKE) $(MAKEFLAGS) SUNDIALS_HOME=$(SUNDIALS_HOME) AMREX_HOME=$(AMREX_HOME) USE_CUDA=$(USE_CUDA) USE_HIP=$(USE_HIP) USE_SYCL=$(USE_SYCL) PELE_USE_KLU=$(PELE_USE_KLU) PELE_USE_MAGMA=$(PELE_USE_MAGMA) DEBUG=$(DEBUG) COMP=$(HOSTCC) NVCC=$(COMP) realclean
+13 −6		.github/workflows/ci.yml
+3 −3		.github/workflows/dependencies/dependencies_dpcpp.sh
+10 −27		Eos/SRK.H
+1 −1		Reactions/ReactorCvode.H
+15 −15		Reactions/ReactorCvode.cpp
+8 −40		Reactions/ReactorUtils.H
+1,116 −0		Support/Mechanism/Models/Aromatic_KrNara/mechanism.H
+101 −0		Support/Mechanism/Models/BurkeDryer/mechanism.H
+318 −0		Support/Mechanism/Models/C1-C2-NO/mechanism.H
+283 −0		Support/Mechanism/Models/C1-C2-NO_qss/mechanism.H
+129 −0		Support/Mechanism/Models/CH4_lean/mechanism.H
+101 −0		Support/Mechanism/Models/CH4_lean_qss/mechanism.H
+108 −0		Support/Mechanism/Models/Davis/mechanism.H
+157 −0		Support/Mechanism/Models/FFCM1_Red/mechanism.H
+45 −0		Support/Mechanism/Models/IonizedAir/mechanism.H
+94 −0		Support/Mechanism/Models/Kolla/mechanism.H
+73 −0		Support/Mechanism/Models/LiDryer/mechanism.H
+283 −0		Support/Mechanism/Models/LuDME/mechanism.H
+234 −0		Support/Mechanism/Models/LuEthylene/mechanism.H
+164 −0		Support/Mechanism/Models/LuEthylene_qss/mechanism.H
+836 −0		Support/Mechanism/Models/NUIGalway/mechanism.H
+19 −0		Support/Mechanism/Models/Null/mechanism.H
+339 −0		Support/Mechanism/Models/SootReaction/mechanism.H
+24 −0		Support/Mechanism/Models/air/mechanism.H
+514 −0		Support/Mechanism/Models/alzeta/mechanism.H
+73 −0		Support/Mechanism/Models/chem-H/mechanism.H
+31 −0		Support/Mechanism/Models/decane_3sp/mechanism.H
+381 −0		Support/Mechanism/Models/dodecane_lu/mechanism.H
+255 −0		Support/Mechanism/Models/dodecane_lu_qss/mechanism.H
+402 −0		Support/Mechanism/Models/dodecane_wang/mechanism.H
+38 −0		Support/Mechanism/Models/dodmethair_4sp/mechanism.H
+157 −0		Support/Mechanism/Models/drm19/mechanism.H
+213 −0		Support/Mechanism/Models/ethylene_af/mechanism.H
+234 −0		Support/Mechanism/Models/grimech12/mechanism.H
+255 −0		Support/Mechanism/Models/grimech30-noArN/mechanism.H
+381 −0		Support/Mechanism/Models/grimech30/mechanism.H
+31 −0		Support/Mechanism/Models/heptane_3sp/mechanism.H
+374 −0		Support/Mechanism/Models/heptane_fc/mechanism.H
+626 −0		Support/Mechanism/Models/heptane_lu_88sk/mechanism.H
+395 −0		Support/Mechanism/Models/heptane_lu_qss/mechanism.H
+192 −0		Support/Mechanism/Models/methaneIons_diRenzo/mechanism.H
+255 −0		Support/Mechanism/Models/ndodecane_35/mechanism.H
+24 −0		Support/Mechanism/Models/nitrogens/mechanism.H
+248 −0		Support/Mechanism/Models/propane_fc/mechanism.H
+122 −0		Support/Mechanism/Models/sCO2/mechanism.H
+90 −0		Support/ceptr/ceptr/transport.py
+1 −1		Support/ceptr/pyproject.toml
+1 −1		Testing/Exec/CeptrTest/PelePhysicsSimulation/inputs-cvode-0d.inp
+11 −9		Testing/Exec/EosEval/GPU_misc.H
+68 −53		Testing/Exec/EosEval/main.cpp
+1 −1		Testing/Exec/IgnitionDelay/inputs/inputs.0d_firstpass
+10 −11		Testing/Exec/Make.PelePhysics
+1 −1		Testing/Exec/ReactEval/inputs.3d_1dArray
+1 −1		Testing/Exec/ReactEval/inputs.3d_Array4
+2 −10		ThirdParty/GNUmakefile
+1 −1		ThirdParty/Make.ThirdParty
+4 −4		Utility/Diagnostics/DiagConditional.cpp
+17 −18		Utility/Diagnostics/DiagFramePlane.cpp
+4 −4		Utility/Diagnostics/DiagPDF.cpp
+8 −8		Utility/TurbInflow/turbinflow.cpp