Deploying to main from @ ffbf2f81e277a381a0ed95c15ed73798f6af488f 🚀

AMReX-Fluids · Oct 22, 2024 · 6c1d756 · 6c1d756
1 parent 8b37ea4
commit 6c1d756
Show file tree

Hide file tree

Showing 47 changed files with 378 additions and 227 deletions.
diff --git a/amrex-hydro/docs_html/.buildinfo b/amrex-hydro/docs_html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
-# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 0711d1d4fcdac786d1007c71c2ac352c
+# This file records the configuration used when building these files. When it is not found, a full rebuild will be done.
+config: 44ebfa6123164b84df3975728c541b5b
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/amrex-hydro/docs_html/BDS.html b/amrex-hydro/docs_html/BDS.html
@@ -1,25 +1,23 @@
+
+
 <!DOCTYPE html>
 <html class="writer-html5" lang="en" data-content_root="./">
 <head>
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>BDS Algorithm &mdash; amrex-hydro 24.10-dev documentation</title>
+  <title>BDS Algorithm &mdash; amrex-hydro 24.11-dev documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
-      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
+      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
       <link rel="stylesheet" type="text/css" href="_static/theme_overrides.css?v=15813166" />
 
 
-  <!--[if lt IE 9]>
-    <script src="_static/js/html5shiv.min.js"></script>
-  <![endif]-->
-
-        <script src="_static/jquery.js?v=5d32c60e"></script>
-        <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
-        <script src="_static/documentation_options.js?v=3963c78d"></script>
-        <script src="_static/doctools.js?v=9a2dae69"></script>
-        <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
-        <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
+      <script src="_static/jquery.js?v=5d32c60e"></script>
+      <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
+      <script src="_static/documentation_options.js?v=c413f8cb"></script>
+      <script src="_static/doctools.js?v=9bcbadda"></script>
+      <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
+      <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <script src="_static/js/theme.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
@@ -36,9 +34,6 @@
           <a href="index.html" class="icon icon-home">
             amrex-hydro
           </a>
-              <div class="version">
-                24.10-dev
-              </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
     <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />

diff --git a/amrex-hydro/docs_html/InOutSolvability.html b/amrex-hydro/docs_html/InOutSolvability.html
@@ -1,25 +1,23 @@
+
+
 <!DOCTYPE html>
 <html class="writer-html5" lang="en" data-content_root="./">
 <head>
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>Enforcing inflow-outflow solvability &mdash; amrex-hydro 24.10-dev documentation</title>
+  <title>Enforcing inflow-outflow solvability &mdash; amrex-hydro 24.11-dev documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
-      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
+      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
       <link rel="stylesheet" type="text/css" href="_static/theme_overrides.css?v=15813166" />
 
 
-  <!--[if lt IE 9]>
-    <script src="_static/js/html5shiv.min.js"></script>
-  <![endif]-->
-
-        <script src="_static/jquery.js?v=5d32c60e"></script>
-        <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
-        <script src="_static/documentation_options.js?v=3963c78d"></script>
-        <script src="_static/doctools.js?v=9a2dae69"></script>
-        <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
-        <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
+      <script src="_static/jquery.js?v=5d32c60e"></script>
+      <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
+      <script src="_static/documentation_options.js?v=c413f8cb"></script>
+      <script src="_static/doctools.js?v=9bcbadda"></script>
+      <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
+      <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <script src="_static/js/theme.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" /> 
@@ -36,9 +34,6 @@
           <a href="index.html" class="icon icon-home">
             amrex-hydro
           </a>
-              <div class="version">
-                24.10-dev
-              </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
     <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />

diff --git a/amrex-hydro/docs_html/Install.html b/amrex-hydro/docs_html/Install.html
@@ -1,24 +1,22 @@
+
+
 <!DOCTYPE html>
 <html class="writer-html5" lang="en" data-content_root="./">
 <head>
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>Installation Guide &mdash; amrex-hydro 24.10-dev documentation</title>
+  <title>Installation Guide &mdash; amrex-hydro 24.11-dev documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
-      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
+      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
       <link rel="stylesheet" type="text/css" href="_static/theme_overrides.css?v=15813166" />
 
 
-  <!--[if lt IE 9]>
-    <script src="_static/js/html5shiv.min.js"></script>
-  <![endif]-->
-
-        <script src="_static/jquery.js?v=5d32c60e"></script>
-        <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
-        <script src="_static/documentation_options.js?v=3963c78d"></script>
-        <script src="_static/doctools.js?v=9a2dae69"></script>
-        <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
+      <script src="_static/jquery.js?v=5d32c60e"></script>
+      <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
+      <script src="_static/documentation_options.js?v=c413f8cb"></script>
+      <script src="_static/doctools.js?v=9bcbadda"></script>
+      <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script src="_static/js/theme.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
@@ -37,9 +35,6 @@
           <a href="index.html" class="icon icon-home">
             amrex-hydro
           </a>
-              <div class="version">
-                24.10-dev
-              </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
     <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />

diff --git a/amrex-hydro/docs_html/Introduction.html b/amrex-hydro/docs_html/Introduction.html
@@ -1,24 +1,22 @@
+
+
 <!DOCTYPE html>
 <html class="writer-html5" lang="en" data-content_root="./">
 <head>
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>Introduction &mdash; amrex-hydro 24.10-dev documentation</title>
+  <title>Introduction &mdash; amrex-hydro 24.11-dev documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
-      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
+      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
       <link rel="stylesheet" type="text/css" href="_static/theme_overrides.css?v=15813166" />
 
 
-  <!--[if lt IE 9]>
-    <script src="_static/js/html5shiv.min.js"></script>
-  <![endif]-->
-
-        <script src="_static/jquery.js?v=5d32c60e"></script>
-        <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
-        <script src="_static/documentation_options.js?v=3963c78d"></script>
-        <script src="_static/doctools.js?v=9a2dae69"></script>
-        <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
+      <script src="_static/jquery.js?v=5d32c60e"></script>
+      <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
+      <script src="_static/documentation_options.js?v=c413f8cb"></script>
+      <script src="_static/doctools.js?v=9bcbadda"></script>
+      <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
     <script src="_static/js/theme.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
@@ -37,9 +35,6 @@
           <a href="index.html" class="icon icon-home">
             amrex-hydro
           </a>
-              <div class="version">
-                24.10-dev
-              </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
     <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />
@@ -121,7 +116,7 @@
 cell-centered velocity update that approximately obeys a divergence constraint).</p></li>
 </ul>
 </li>
-<li><p><a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/EB.html#sec-eb-redistribution" title="(in amrex v24.10-dev)"><span class="xref std std-ref">Redistribution</span></a>: AMReX contains schemes to address the “small cell problem” associated with explicit cut
+<li><p><a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/EB.html#sec-eb-redistribution" title="(in amrex v24.11-dev)"><span class="xref std std-ref">Redistribution</span></a>: AMReX contains schemes to address the “small cell problem” associated with explicit cut
 cell algorithms (part of step 4 for problems with embedded boundaries).</p></li>
 <li><p><a class="reference internal" href="Utilities.html#utilities"><span class="std std-ref">Helper functions</span></a>: to do things like compute slopes, create fluxes from face-centered values, and
 create the convective term from fluxes (used in all but step 2).</p></li>

diff --git a/amrex-hydro/docs_html/Projections.html b/amrex-hydro/docs_html/Projections.html
@@ -1,25 +1,23 @@
+
+
 <!DOCTYPE html>
 <html class="writer-html5" lang="en" data-content_root="./">
 <head>
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>Projection Methods &mdash; amrex-hydro 24.10-dev documentation</title>
+  <title>Projection Methods &mdash; amrex-hydro 24.11-dev documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
-      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
+      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
       <link rel="stylesheet" type="text/css" href="_static/theme_overrides.css?v=15813166" />
 
 
-  <!--[if lt IE 9]>
-    <script src="_static/js/html5shiv.min.js"></script>
-  <![endif]-->
-
-        <script src="_static/jquery.js?v=5d32c60e"></script>
-        <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
-        <script src="_static/documentation_options.js?v=3963c78d"></script>
-        <script src="_static/doctools.js?v=9a2dae69"></script>
-        <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
-        <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
+      <script src="_static/jquery.js?v=5d32c60e"></script>
+      <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
+      <script src="_static/documentation_options.js?v=c413f8cb"></script>
+      <script src="_static/doctools.js?v=9bcbadda"></script>
+      <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
+      <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <script src="_static/js/theme.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
@@ -38,9 +36,6 @@
           <a href="index.html" class="icon icon-home">
             amrex-hydro
           </a>
-              <div class="version">
-                24.10-dev
-              </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
     <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />
@@ -184,7 +179,7 @@
 Both classes provide member functions <code class="docutils literal notranslate"><span class="pre">getLinOp</span></code> and <code class="docutils literal notranslate"><span class="pre">getMLMG</span></code> to
 access the underlying objects and allow for modification of the linear operator
 and multigrid properties if needed.
-Details of the linear solver implementations are in the <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers_Chapter.html#chap-linearsolvers" title="(in amrex v24.10-dev)"><span>Linear Solvers</span></a>
+Details of the linear solver implementations are in the <a class="reference external" href="https://amrex-codes.github.io/amrex/docs_html/LinearSolvers_Chapter.html#chap-linearsolvers" title="(in amrex v24.11-dev)"><span>Linear Solvers</span></a>
 section of AMReX’s documentation.</p>
 <p id="projections-inputs">Both Projector classes provide the following parameters, which can be set in an
 inputs file or on the command line. For the MacProjector, these must be preceded by

diff --git a/amrex-hydro/docs_html/Schemes.html b/amrex-hydro/docs_html/Schemes.html
@@ -1,25 +1,23 @@
+
+
 <!DOCTYPE html>
 <html class="writer-html5" lang="en" data-content_root="./">
 <head>
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>Advection schemes &mdash; amrex-hydro 24.10-dev documentation</title>
+  <title>Advection schemes &mdash; amrex-hydro 24.11-dev documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
-      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
+      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
       <link rel="stylesheet" type="text/css" href="_static/theme_overrides.css?v=15813166" />
 
 
-  <!--[if lt IE 9]>
-    <script src="_static/js/html5shiv.min.js"></script>
-  <![endif]-->
-
-        <script src="_static/jquery.js?v=5d32c60e"></script>
-        <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
-        <script src="_static/documentation_options.js?v=3963c78d"></script>
-        <script src="_static/doctools.js?v=9a2dae69"></script>
-        <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
-        <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
+      <script src="_static/jquery.js?v=5d32c60e"></script>
+      <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
+      <script src="_static/documentation_options.js?v=c413f8cb"></script>
+      <script src="_static/doctools.js?v=9bcbadda"></script>
+      <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
+      <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <script src="_static/js/theme.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
@@ -38,9 +36,6 @@
           <a href="index.html" class="icon icon-home">
             amrex-hydro
           </a>
-              <div class="version">
-                24.10-dev
-              </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
     <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />

diff --git a/amrex-hydro/docs_html/Utilities.html b/amrex-hydro/docs_html/Utilities.html
@@ -1,25 +1,23 @@
+
+
 <!DOCTYPE html>
 <html class="writer-html5" lang="en" data-content_root="./">
 <head>
   <meta charset="utf-8" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-  <title>Helper functions &mdash; amrex-hydro 24.10-dev documentation</title>
+  <title>Helper functions &mdash; amrex-hydro 24.11-dev documentation</title>
       <link rel="stylesheet" type="text/css" href="_static/pygments.css?v=fa44fd50" />
-      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=19f00094" />
+      <link rel="stylesheet" type="text/css" href="_static/css/theme.css?v=e59714d7" />
       <link rel="stylesheet" type="text/css" href="_static/theme_overrides.css?v=15813166" />
 
 
-  <!--[if lt IE 9]>
-    <script src="_static/js/html5shiv.min.js"></script>
-  <![endif]-->
-
-        <script src="_static/jquery.js?v=5d32c60e"></script>
-        <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
-        <script src="_static/documentation_options.js?v=3963c78d"></script>
-        <script src="_static/doctools.js?v=9a2dae69"></script>
-        <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
-        <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
+      <script src="_static/jquery.js?v=5d32c60e"></script>
+      <script src="_static/_sphinx_javascript_frameworks_compat.js?v=2cd50e6c"></script>
+      <script src="_static/documentation_options.js?v=c413f8cb"></script>
+      <script src="_static/doctools.js?v=9bcbadda"></script>
+      <script src="_static/sphinx_highlight.js?v=dc90522c"></script>
+      <script async="async" src="https://cdn.jsdelivr.net/npm/mathjax@3/es5/tex-mml-chtml.js"></script>
     <script src="_static/js/theme.js"></script>
     <link rel="index" title="Index" href="genindex.html" />
     <link rel="search" title="Search" href="search.html" />
@@ -38,9 +36,6 @@
           <a href="index.html" class="icon icon-home">
             amrex-hydro
           </a>
-              <div class="version">
-                24.10-dev
-              </div>
 <div role="search">
   <form id="rtd-search-form" class="wy-form" action="search.html" method="get">
     <input type="text" name="q" placeholder="Search docs" aria-label="Search docs" />

diff --git a/amrex-hydro/docs_html/_static/basic.css b/amrex-hydro/docs_html/_static/basic.css
@@ -1,12 +1,5 @@
 /*
- * basic.css
- * ~~~~~~~~~
- *
  * Sphinx stylesheet -- basic theme.
- *
- * :copyright: Copyright 2007-2024 by the Sphinx team, see AUTHORS.
- * :license: BSD, see LICENSE for details.
- *
  */
 
 /* -- main layout ----------------------------------------------------------- */
@@ -115,15 +108,11 @@ img {
 /* -- search page ----------------------------------------------------------- */
 
 ul.search {
-    margin: 10px 0 0 20px;
-    padding: 0;
+    margin-top: 10px;
 }
 
 ul.search li {
-    padding: 5px 0 5px 20px;
-    background-image: url(file.png);
-    background-repeat: no-repeat;
-    background-position: 0 7px;
+    padding: 5px 0;
 }
 
 ul.search li a {